RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAP1GAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132359

Ensembl transcript IDs: ENST00000254695.13, ENST00000366401.8, ENST00000540393.6, ENST00000542807.1, ENST00000571555.1, ENST00000574515.1, ENST00000574709.1, ENST00000575979.1, ENST00000637138.1

Found 1170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCAGACTGGGACACCTGGACCAACAGCACATCTGTGGGCACGTaGCCATGGGGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGC +
Preference number: 1 (lower is better)
Translates to: WPDWDTWTNSTSVGT*PWGSRAGTVRVVDG
Trigger: GCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCCCCATGGCCACGTGCCCACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 90 bp TGCAGCGCAGTTCTGGCCCGTCCAGCTCTGGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGGGCAGGGCA +
Preference number: 1 (lower is better)
Translates to: CSAVLARPALALSLN*LEPRSRYTGSRGRA
Trigger: TGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 90 bp TGGAGCCCCGCTCACGGTACACTGGCAGCAGGGGCAGGGCAGCCCTaGGCCTACGTCAGCAGATGGGAAAGGCGTTCAGCACAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: WSPAHGTLAAGAGQP*AYVSRWERRSAQKQ
Trigger: CTGCTTCTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGCCCAGGGCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGGGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR GCA 90 bp GGGAGGAGCCGAGGGGTCCTGAGCATGGCTGACTGGCCTGGTCCCTaGTGGCCTCCTGTACCCATGAGATCTACTCGAACCCCCAACTGC +
Preference number: 1 (lower is better)
Translates to: GRSRGVLSMADWPGP*WPPVPMRSTRTPNC
Trigger: GCAGTTGGGGGTTCGAGTAGATCTCATGGGTACAGGAGGCCAGCAGGGACCAGGCCAGTCAGCCATGCTCAGGACCCCTCGGCTCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 90 bp GAACATGGGGCCTCCACCACCGAGTGCGTTCCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCG +
Preference number: 1 (lower is better)
Translates to: EHGASTTECVPGSKA*HVQEGTALWPRPSP
Trigger: CGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGCCCCATGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR GCA 90 bp AGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTaGAGCGCAGTTCTGGCCCGTCCAGCTCTGGCTCTGAGCTTGAAC +
Preference number: 1 (lower is better)
Translates to: RNRVGPKVPASVQEV*SAVLARPALALSLN
Trigger: GTTCAAGCTCAGAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 90 bp GTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGGCTCTGCTCCCACCCCCTACTCTGT +
Preference number: 1 (lower is better)
Translates to: VPGSKACHVQEGTAL*PRPSPRLCSHPLLC
Trigger: ACAGAGTAGGGGGTGGGAGCAGAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 90 bp AGGAGCCGAGGGGTCCTGAGCATGGCTGACTGGCCTGGTCCCTGCTaGCCTCCTGTACCCATGAGATCTACTCGAACCCCCAACTGCTTA +
Preference number: 1 (lower is better)
Translates to: RSRGVLSMADWPGPC*PPVPMRSTRTPNCL
Trigger: TAAGCAGTTGGGGGTTCGAGTAGATCTCATGGGTACAGGAGGCCAGCAGGGACCAGGCCAGTCAGCCATGCTCAGGACCCCTCGGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 90 bp GCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCC +
Preference number: 1 (lower is better)
Translates to: ATNLGSWEHGASTTE*VPGSKACHVQEGTA
Trigger: GGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 90 bp ATGGGACAGCATGGTGACAACCTGGAAACCCCAAAGGACCCCAGATaGCAATGTGACACGGCCCATCCACCAAGCACCTGTAATGCCGGC +
Preference number: 1 (lower is better)
Translates to: MGQHGDNLETPKDPR*QCDTAHPPSTCNAG
Trigger: GCCGGCATTACAGGTGCTTGGTGGATGGGCCGTGTCACATTGCCATCTGGGGTCCTTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 90 bp GGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCTaGAGAGGAAGGGACCCTGGGTTGAGGGTTCTAATCCCAGCTTTG +
Preference number: 1 (lower is better)
Translates to: GPRKRSHLFNQPCRR*RGRDPGLRVLIPAL
Trigger: CAAAGCTGGGATTAGAACCCTCAACCCAGGGTCCCTTCCTCTGCAGCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp CCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTaGGGCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCAC +
Preference number: 1 (lower is better)
Translates to: PMGIKHSAGNPCHWS*GRCPASVTLQPRLH
Trigger: GTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR TCA 90 bp CACCAGCGTGAGCACCATCTAGATGAGCCTAGTCACGAGGGCCAATaGGGTTTGGGCAAATCTTTGAGCCCCAAGACTGGGCGCAGCATA +
Preference number: 1 (lower is better)
Translates to: HQREHHLDEPSHEGQ*GLGKSLSPKTGRSI
Trigger: TATGCTGCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAACCTCATTGGCCCTCGTGACTAGGCTCATCTAGATGGTGCTCACGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp CAGATCCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTaGTCGTGGGGCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGT +
Preference number: 1 (lower is better)
Translates to: QIPMGIKHSAGNPCH*SWGRCPASVTLQPR
Trigger: ACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp ACAGGCAGGTATGGGATTCCCAAATGGGACAGCATGGTGACAACCTaGAAACCCCAAAGGACCCCAGATGGCAATGTGACACGGCCCATC +
Preference number: 1 (lower is better)
Translates to: TGRYGIPKWDSMVTT*KPQRTPDGNVTRPI
Trigger: GATGGGCCGTGTCACATTGCCATCTGGGGTCCTTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCATTTGGGAATCCCATACCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp GGCAGTTCCCAGAGCCAGAGATGTGTCCCGGAAAACATCCCCTCGTaGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCACCAT +
Preference number: 1 (lower is better)
Translates to: GSSQSQRCVPENIPS*RSQWKCLKHQREHH
Trigger: ATGGTGCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTTCCGGGACACATCTCTGGCTCTGGGAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp AGCCAGAGATGTGTCCCGGAAAACATCCCCTCGTGGAGATCACAGTaGAAATGCCTCAAACACCAGCGTGAGCACCATCTAGATGAGCCT +
Preference number: 1 (lower is better)
Translates to: SQRCVPENIPSWRSQ*KCLKHQREHHLDEP
Trigger: AGGCTCATCTAGATGGTGCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTTCCGGGACACATCTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 90 bp AGATGTGTCCCGGAAAACATCCCCTCGTGGAGATCACAGTGGAAATaGCTCAAACACCAGCGTGAGCACCATCTAGATGAGCCTAGTCAC +
Preference number: 1 (lower is better)
Translates to: RCVPENIPSWRSQWK*LKHQREHHLDEPSH
Trigger: GTGACTAGGCTCATCTAGATGGTGCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTTCCGGGACACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACCACCGAGTGCGTTCCTGGTAGTAAA +
Preference number: 1 (lower is better)
Translates to: EFYQDGLKDATNLGS*EHGASTTECVPGSK
Trigger: TTTACTACCAGGAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR GCA 90 bp CTTCCCACAGAGGCGAGCCAGATCCTGCAACTGTTCTTAAAGAAATaGAGTTTGACCTTGCCAGTGCCTCCAGAAGCCCAGCCAACAAAA +
Preference number: 1 (lower is better)
Translates to: LPTEASQILQLFLKK*SLTLPVPPEAQPTK
Trigger: TTTTGTTGGCTGGGCTTCTGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAAGAACAGTTGCAGGATCTGGCTCGCCTCTGTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTaGACGATGACATGGTTGGATGAGATGCTAAAAAGAGCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: TSSKLLPSPGLRFLI*TMTWLDEMLKRASR
Trigger: CCTGCTGGCTCTTTTTAGCATCTCATCCAACCATGTCATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 90 bp TTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGACATaGTTGGATGAGATGCTAAAAAGAGCCAGCAGGCTTGTGTTGAGA +
Preference number: 1 (lower is better)
Translates to: LLPSPGLRFLIWTMT*LDEMLKRASRLVLR
Trigger: TCTCAACACAAGCCTGCTGGCTCTTTTTAGCATCTCATCCAACCATGTCATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCACCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: PKVPASVQEVCSAVLARPPLTVH*QQGQGS
Trigger: GCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGG...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CAA 90 bp GAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: EVCSAVLARPALALS*NWLEPRSRYTGSRG
Trigger: GCCCCTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR TCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 2 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 2 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCATGGCTCCTGGGAACATaGGGCCTCCACCACCGAGTG +
Preference number: 2 (lower is better)
Translates to: PKVPASVQEVCSAVLARPWLLGT*GLHHRV
Trigger: CACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCA...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTTGTGCAGCGCAGTTCTaGCCCGTCCAGCTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVCAAQF*PVQLWL
Trigger: GAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACA...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGTCCAGGAACCCGAGCTaGCCGCCCCGTGGTCTAGGG +
Preference number: 2 (lower is better)
Translates to: GEHPKQERAARMLRSRKRSRNPS*PPRGLG
Trigger: CCCTAGACCACGGGGCGGGCAGCTCGGGTTCCTGGA...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 2 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVTRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PKVPASVQEVCSAVLARPTRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVPLTVH*QQGQGS
Trigger: GCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTTCAGGAGAAACCGGGTaGGACCCAAAGTCCCCGCCT +
Preference number: 2 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVSGETG*DPKSPP
Trigger: AGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGA...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTCAAGGGCACAGTAGCTaGAAAAGGCCCCAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSQGHSS*KRPQGQ
Trigger: CTGGCCCTGGGGCCTTTTCCAGCTACTGTGCCCTTG...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp CACCAGGCTGCAGGATCAGGCTTGGCAAACTTTACTGGCCTCCCCTaGCCTCGATACAGGGTAGCTAGAGGCTGGGGGAGGAGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: HQAAGSGLANFTGLP*PRYRVARGWGRSRG
Trigger: CCCTCGGCTCCTCCCCCAGCCTCTAGCTACCCTGTATCGAGGCAAGGGGAGGCCAGTAAAGTTTGCCAAGCCTGATCCTGCAGCCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR TCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 2 (lower is better)
Translates to: GEHPKQERAARMLRSRKRGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGTGGGTCACAGGGTCTaGCCCACACCCAGATGGGGT +
Preference number: 2 (lower is better)
Translates to: GEHPKQERAARMLRSRKRVGHRV*PTPRWG
Trigger: ACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCAC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCAGTGGGTCACAGGGTCTaGCCCACACCCAGATGGGGT +
Preference number: 2 (lower is better)
Translates to: IHQAPVMPASHRGEPDPAVGHRV*PTPRWG
Trigger: ACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCAC...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCCCCTCACCGAGGCTCTaGTCCCACCCCCTACTCTGT +
Preference number: 2 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFPSPRL*SHPLLC
Trigger: ACAGAGTAGGGGGTGGGAGCAGAGCCTCGGTGAGGG...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR GCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCC +
Preference number: 2 (lower is better)
Translates to: KVPASVQEVCSAVLARPAASTTE*VPGSKA
Trigger: GGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 2 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 2 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 2 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGGATGCTACGAATCTTaGCTCCTGGGAACATGGGGC +
Preference number: 2 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSGCYES*LLGTWG
Trigger: GCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCCTACGTCAGCAGATaGGAAAGGCGTTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: PKVPASVQEVCSAVLARPAYVSR*ERRSAQ
Trigger: CTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AGCCTCACCAGCATCCTTGACTGCTCACCTCCATGCCAGTGCCAAAGCAGCAGCGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGG +
Preference number: 2 (lower is better)
Translates to: SLTSILDCSPPCQCQSSSALSLN*LEPRSR
Trigger: CCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGC...GCTGCTGCTTTGGCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGG +
Preference number: 2 (lower is better)
Translates to: GEHPKQERAARMLRSRKRALSLN*LEPRSR
Trigger: CCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp AGCCTCACCAGCATCCTTGACTGCTCACCTCCATGCCAGTGCCAAAGCAGCAGCCAACCATGTAGGCGCTaGAGAGGAAGGGACCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLTSILDCSPPCQCQSSSQPCRR*RGRDPG
Trigger: CCCAGGGTCCCTTCCTCTGCAGCGCCTACATGGTTG...GCTGCTGCTTTGGCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: SGSELELAGAPLTVHWQQKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 2 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 2 (lower is better)
Translates to: KAFSTEADRRFRAPELRGGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: AIIRRNRVGPKVPASVQETRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRTRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR GCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: KVPASVQEVCSAVLARPATALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR GCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCC +
Preference number: 2 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEASTTE*VPGSKA
Trigger: GGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCC +
Preference number: 2 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVASTTE*VPGSKA
Trigger: GGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: PGSKACHVQEGTALWPRPKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGCCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 2 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCCCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 2 (lower is better)
Translates to: PPSAFLVVKPATFRKALPPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGCAGGCTCGTTGTACCTaGAGGATGCCCACCTTAACC +
Preference number: 2 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGQARCT*RMPTLT
Trigger: GGTTAAGGTGGGCATCCTCCAGGTACAACGAGCCTG...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGAGGGAGACATGGGATTaGGGTGTACAAGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: GEHPKQERAARMLRSRKRRETWD*GVQGAG
Trigger: GCCAGCCCCTTGTACACCCCAATCCCATGTCTCCCT...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGTTTGGGCAAATCTTTaGGCCCCAAGACTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: GEHPKQERAARMLRSRKRVWANL*APRLGA
Trigger: TGCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAAC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPTALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGACCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 2 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGGATGCTACGAATCTTaGCTCCTGGGAACATGGGGC +
Preference number: 2 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEGCYES*LLGTWG
Trigger: GCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCCAAGGGCACAGTAGCTaGAAAAGGCCCCAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRQGHSS*KRPQGQ
Trigger: CTGGCCCTGGGGCCTTTTCCAGCTACTGTGCCCTTG...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp CCAGATCCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATaGGTCGTGGGGCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: PDPYGNKAFSWKSLS*VVGQVPSQCHSAAP
Trigger: CGGGGCTGCAGAGTGACACTGGCTGGGCACCTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 2 (lower is better)
Translates to: WERRSAQKQIDGLELQSYGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR TCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGAGAAAGGTAGTGTTTaGGTTGGCACCTGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GEHPKQERAARMLRSRKREKGSV*VGTWQG
Trigger: ACCCTGCCAGGTGCCAACTCAAACACTACCTTTCTC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGACCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 2 (lower is better)
Translates to: WERRSAQKQIDGLELQSYGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: RILSGWPQGCYESWLLGTAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 2 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 2 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp ATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCCTG +
Preference number: 2 (lower is better)
Translates to: IAPNFIRMASRMLRI*APGNMGPPPPSAFL
Trigger: CAGGAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR TCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGGGATGTCCTTGGAGGTaGGCTGGCTGTCCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQGCPWR*AGCPSK
Trigger: CTTGCTGGGACAGCCAGCTCACCTCCAAGGACATCC...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGAGAAGCCCACGGCGCTaGAGACTCGGAAGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQRSPRR*RLGRGR
Trigger: TCTCCCCCTTCCGAGTCTGCAGCGCCGTGGGCTTCT...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 2 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 2 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 2 (lower is better)
Translates to: RILSGWPQGCYESWLLGTGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR TCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 2 (lower is better)
Translates to: RILSGWPQGCYESWLLGTGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR TCA 90 bp AGCCTCACCAGCATCCTTGACTGCTCACCTCCATGCCAGTGCCAAAGCAGCAGCTGGGGGCTGCTACGGTaGCTCTTCATAAAAGCTAAA +
Preference number: 2 (lower is better)
Translates to: SLTSILDCSPPCQCQSSSWGLLR*LFIKAK
Trigger: TTTAGCTTTTATGAAGAGTCACCGTAGCAGCCCCCA...GCTGCTGCTTTGGCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: KAFSTEADRRFRAPELRGTALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 2 (lower is better)
Translates to: AIAPNFIRMASRMLRILAGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 2 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: MGKAFSTEADRRFRAPELTRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: QLANRTQSFPHTWRGRKITNLGS*EHGAST
Trigger: GGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGT...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: SRWERRSAQKQIDGLELQTNLGS*EHGAST
Trigger: GGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGT...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAACCTTGTCATTGGTCGTaGGGCAGGTGCCCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKPCHWS*GRCPAS
Trigger: ACTGGCTGGGCACCTGCCCCACGACCAATGACAAGG...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAATCAGCACTGCCCGGGTaGGCTGGAAGTGCACACTCT +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKSALPG*AGSAHS
Trigger: AGAGTGTGCACTTCCAGCCCACCCGGGCAGTGCTGA...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp GAGGTTTTCCTCAACCAACACAGCAGCATCTCAGCACTGGCTCCTTaGCTCTCCCTGAATTCCTTCTCACTCCTGGCTTCCCACCCCTTT +
Preference number: 2 (lower is better)
Translates to: EVFLNQHSSISALAP*LSLNSFSLLASHPF
Trigger: AAAGGGGTGGGAAGCCAGGAGTGAGAAGGAATTCAGGGAGAGCAAAGGAGCCAGTGCTGAGATGCTGCTGTGTTGGTTGAGGAAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp ACAGGTCCAGATCCCTATGGGAATAAAGCATTCAGCTGGAAATCCTaGTCATTGGTCGTGGGGCAGGTGCCCAGCCAGTGTCACTCTGCA +
Preference number: 2 (lower is better)
Translates to: TGPDPYGNKAFSWKS*SLVVGQVPSQCHSA
Trigger: TGCAGAGTGACACTGGCTGGGCACCTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGGATCTGGACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGGTTTGGGCAAATCTTTaGGCCCCAAGACTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQVWANL*APRLGA
Trigger: TGCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAAC...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCCCAGCAGGCTTGTGTTaGGATGATGCTGACAAAGCT +
Preference number: 2 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRPAGLC*DDADKA
Trigger: AGCTTTGTCAGCATCATCTCAACACAAGCCTGCTGG...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGTTCAGATGTGACAGCTaGCTACAGACCCGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQFRCDS*LQTRSW
Trigger: CCAGCTGCGGGTCTGTAGGCAGCTGTCACATCTGAA...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: WERRSAQKQIDGLELQSYKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 2 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 2 (lower is better)
Translates to: SRWERRSAQKQIDGLELQPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 2 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGGGATGCTACGAATCTTaGCTCCTGGGAACATGGGGC +
Preference number: 2 (lower is better)
Translates to: SRWERRSAQKQIDGLELQGCYES*LLGTWG
Trigger: GCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCC...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCACAGCAAACCGGGCATaGAGACCCCATCTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSTANRA*RPHLRS
Trigger: AGACCTGAGATGGGGTCTCCATGCCCGGTTTGCTGT...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp GCGAGCCAGATCCTGCAACTGTTCTTAAAGAAATGCAGTTTGACCTaGCCAGTGCCTCCAGAAGCCCAGCCAACAAAACGCGTCCAGAAC +
Preference number: 2 (lower is better)
Translates to: ASQILQLFLKKCSLT*PVPPEAQPTKRVQN
Trigger: GTTCTGGACGCGTTTTGTTGGCTGGGCTTCTGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAAGAACAGTTGCAGGATCTGGCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp ACAGAGGCGAGCCAGATCCTGCAACTGTTCTTAAAGAAATGCAGTTaGACCTTGCCAGTGCCTCCAGAAGCCCAGCCAACAAAACGCGTC +
Preference number: 2 (lower is better)
Translates to: TEASQILQLFLKKCS*TLPVPPEAQPTKRV
Trigger: GACGCGTTTTGTTGGCTGGGCTTCTGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAAGAACAGTTGCAGGATCTGGCTCGCCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: WERRSAQKQIDGLELQSYTALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR GCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCCCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTCCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 2 (lower is better)
Translates to: MGKAFSTEADRRFRAPELPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 2 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVRILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGGCCTACGTCAGCAGATaGGAAAGGCGTTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMAYVSR*ERRSAQ
Trigger: CTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGC...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAACTCTCCTCGAGTAAGTaGGGAGGGGAGATAACGACG +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKLSSSK*GGEITT
Trigger: CGTCGTTATCTCCCCTCCCCACTTACTCGAGGAGAG...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCTGGAAGTGCACACTCTaGAAGCCACAGGATGGAGCT +
Preference number: 2 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSWKCTL*KPQDGA
Trigger: AGCTCCATCCTGTGGCTTCCAGAGTGTGCACTTCCA...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 2 (lower is better)
Translates to: MGKAFSTEADRRFRAPELPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR GCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGAAAACAGGAGAGAGCTaGACGCATGCTAAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQKTGES*THAKEQ
Trigger: CTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTT...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAAGCATGGTGACAACCTaGAAACCCCAAAGGACCCCA +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKSMVTT*KPQRTP
Trigger: TGGGGTCCTTTGGGGTTTCCAGGTTGTCACCATGCT...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAAATGGGACAGCATGGTaGCAACCTGGAAACCCCAAA +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKNGTAW*QPGNPK
Trigger: TTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCATT...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACTCCAGGAACCCGAGCTaGCCGCCCCGTGGTCTAGGG +
Preference number: 2 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDSRNPS*PPRGLG
Trigger: CCCTAGACCACGGGGCGGGCAGCTCGGGTTCCTGGA...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 2 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCCGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 2 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRRILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 2 (lower is better)
Translates to: KAFSTEADRRFRAPELRGRILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCTATGGGATTCCCAAATaGGACAGCATGGTGACAACC +
Preference number: 2 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSYGIPK*DSMVTT
Trigger: GGTTGTCACCATGCTGTCCCATTTGGGAATCCCATA...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGTCGTGGAGATCACAGTaGAAATGCCTCAAACACCAG +
Preference number: 2 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQSWRSQ*KCLKHQ
Trigger: CTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGA...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGGAGGGAAGAGGCATTTaGGGTCCTGTTCAGATCATT +
Preference number: 2 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMEGRGI*GPVQII
Trigger: AATGATCTGAACAGGACCCCAAATGCCTCTTCCCTC...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACCAGCCCCGTCTGCACTaGAAGGGGCTCTTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDQPRLH*KGLFRL
Trigger: GAGCCTGAAGAGCCCCTTTCAGTGCAGACGGGGCTG...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAAGCTCCTCTCCAGCTTaGAAACAGGACTCAATCATT +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKSSSPA*KQDSII
Trigger: AATGATTGAGTCCTGTTTGCAAGCTGGAGAGGAGCT...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 2 (lower is better)
Translates to: QMGKAFSTEADRRFRAPERILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAGTAGTATTTATATCTTaGGCACAGGTCCAGATCCCT +
Preference number: 2 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKVVFIS*AQVQIP
Trigger: AGGGATCTGGACCTGTGCCCAAGATATAAATACTAC...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR GCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR TCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCAATGGGACAGCATGGTaGCAACCTGGAAACCCCAAA +
Preference number: 2 (lower is better)
Translates to: NVILHDWHRQTLSLRPSINGTAW*QPGNPK
Trigger: TTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCATT...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCGAGGGAAGAGGCATTTaGGGTCCTGTTCAGATCATT +
Preference number: 2 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIEGRGI*GPVQII
Trigger: AATGATCTGAACAGGACCCCAAATGCCTCTTCCCTC...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCTTTGAGCCCCAAGACTaGGCGCAGCATAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIFEPQD*AQHKRK
Trigger: TTTCCTTTTATGCTGCGCCCAGTCTTGGGGCTCAAA...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 90 bp AATCATTCCCACACACGTGGCGGGGAAGAAAGATCACAATGTTGCTaGAATGGCAAAAGCTATAGGGAGAATTTCACAATGTCAGTTAAA +
Preference number: 2 (lower is better)
Translates to: NHSHTRGGEERSQCC*NGKSYRENFTMSVK
Trigger: TTTAACTGACATTGTGAAATTCTCCCTATAGCTTTTGCCATTCAAGCAACATTGTGATCTTTCTTCCCCGCCACGTGTGTGGGAATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 72 bp CCAACCCGGGCCCATCGGCAGAGAAGCCCACGGCGCTaGAGACTCGGAAGGGGGAGAAGCCAGGAGGGGATG +
Preference number: 3 (lower is better)
Translates to: PTRAHRQRSPRR*RLGRGRSQEGM
Trigger: CATCCCCTCCTGGCTTCTCCCCCTTCCGAGTCTGCAGCGCCGTGGGCTTCTCTGCCGATGGGCCCGGGTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp GAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGCCCTGGGCCTACGTCA +
Preference number: 3 (lower is better)
Translates to: ELELAGAPLTVH*QQGQGSPGPTS
Trigger: TGACGTAGGCCCAGGGCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 72 bp GGGAGAAGCCAGGAGGGGATGTCCTTGGAGGTGAGCTaGCTGTCCCAGCAAGGGGGCTCTGTGGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: GRSQEGMSLEVS*LSQQGGSVEGG
Trigger: CCCACCCTCCACAGAGCCCCCTTGCTGGGACAGCCAGCTCACCTCCAAGGACATCCCCTCCTGGCTTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 72 bp GTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTaGAGCGCAGTTCTGGCCCGTCCAGCTCTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: VGPKVPASVQEV*SAVLARPALAL
Trigger: CAGAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 72 bp CACATCTGTGGGCACGTGGCCATGGGGCAGCAGGGCTaGGACTGTCAGGGTCGTGGACGGCACTCCCAAACT +
Preference number: 3 (lower is better)
Translates to: HICGHVAMGQQG*DCQGRGRHSQT
Trigger: AGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCCCCATGGCCACGTGCCCACAGATGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 72 bp GGGGTCCTGAGCATGGCTGACTGGCCTGGTCCCTGCTaGCCTCCTGTACCCATGAGATCTACTCGAACCCCC +
Preference number: 3 (lower is better)
Translates to: GVLSMADWPGPC*PPVPMRSTRTP
Trigger: GGGGGTTCGAGTAGATCTCATGGGTACAGGAGGCCAGCAGGGACCAGGCCAGTCAGCCATGCTCAGGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGC +
Preference number: 3 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGALALS*NWLEPR
Trigger: GCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGC...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CAA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: PKVPASVQEVCSAVLARPEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR GCA 72 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTaGACTGAAAGGGGCTCTTCAGGCTCGTTGTACCTG +
Preference number: 3 (lower is better)
Translates to: AGAQPVSLCSPV*TERGSSGSLYL
Trigger: CAGGTACAACGAGCCTGAAGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR TCA 72 bp TGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTaGAAGGGGCTCTTCAGGCTCGTTGTACCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: CPASVTLQPRLH*KGLFRLVVPGG
Trigger: TCCTCCAGGTACAACGAGCCTGAAGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 72 bp GCCTCCACCACCGAGTGCGTTCCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: ASTTECVPGSKA*HVQEGTALWPR
Trigger: TCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR GCA 72 bp TCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGGTaGCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCAC +
Preference number: 3 (lower is better)
Translates to: SAGNPCHWSWGR*PASVTLQPRLH
Trigger: GTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGCCCCACGACCAATGACAAGGATTTCCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGG +
Preference number: 3 (lower is better)
Translates to: KVPASVQEVCSAVLARPARMLRI*APGNMG
Trigger: CCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCT...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR GCA 72 bp CTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTCCAGGACAGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: LGLSGSWTALPN*WYRSLFQDRRG
Trigger: CCCTCTTCTGTCCTGGAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR GCA 72 bp CTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAA +
Preference number: 3 (lower is better)
Translates to: LGSWEHGASTTE*VPGSKACHVQE
Trigger: TTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 72 bp CAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACCACCGAGTGCGTTCCT +
Preference number: 3 (lower is better)
Translates to: QDGLKDATNLGS*EHGASTTECVP
Trigger: AGGAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 72 bp TCTGCACTGAAAGGGGCTCTTCAGGCTCGTTGTACCTaGAGGATGCCCACCTTAACCCCAACCCGGGCCCAT +
Preference number: 3 (lower is better)
Translates to: SALKGALQARCT*RMPTLTPTRAH
Trigger: ATGGGCCCGGGTTGGGGTTAAGGTGGGCATCCTCCAGGTACAACGAGCCTGAAGAGCCCCTTTCAGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp CTCAGCACTGCCCGGGTGGGCTGGAAGTGCACACTCTaGAAGCCACAGGATGGAGCTCCTAGAGATAGTGAG +
Preference number: 3 (lower is better)
Translates to: LSTARVGWKCTL*KPQDGAPRDSE
Trigger: CTCACTATCTCTAGGAGCTCCATCCTGTGGCTTCCAGAGTGTGCACTTCCAGCCCACCCGGGCAGTGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTATAACGACGTCTTCCTaGAACCCCCATTGTCAGCAG +
Preference number: 3 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSITTSS*NPHCQQ
Trigger: CTGCTGACAATGGGGGTTCAAGGAAGACGTCGTTAT...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCATGGAAATCCTTGTCATaGGTCGTGGGGCAGGTGCCC +
Preference number: 3 (lower is better)
Translates to: IHQAPVMPASHRGEPDPAWKSLS*VVGQVP
Trigger: GGGCACCTGCCCCACGACCAATGACAAGGATTTCCA...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGC +
Preference number: 3 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIALALS*NWLEPR
Trigger: GCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGC...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGTTCAGCTGGAAATCCTaGTCATTGGTCGTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGFSWKS*SLVVGQ
Trigger: CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAA...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGCTGCAGGATCAGGCTaGGCAAACTTTACTGGCCTC +
Preference number: 3 (lower is better)
Translates to: GEHPKQERAARMLRSRKRAAGSG*ANFTGL
Trigger: GAGGCCAGTAAAGTTTGCCAAGCCTGATCCTGCAGC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCGGTTTGGGCAAATCTTaGAGCCCCAAGACTGGGCGC +
Preference number: 3 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRGLGKS*SPKTGR
Trigger: GCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAACC...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp GGTCCTGTTCAGATCATTCCAACAGCAAACCGGGCATaGAGACCCCATCTCAGGTCTGTGCTTCTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: GPVQIIPTANRA*RPHLRSVLLWG
Trigger: CCCCCAGAGAAGCACAGACCTGAGATGGGGTCTCCATGCCCGGTTTGCTGTTGGAATGATCTGAACAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp GCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTaGGGTGTACAAGGGGCTGGCGGTAAAACAGAGTTT +
Preference number: 3 (lower is better)
Translates to: AHGPAEGRETWD*GVQGAGGKTEF
Trigger: AAACTCTGTTTTACCGCCAGCCCCTTGTACACCCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp AGCCTCACCAGCATCCTTGACTGCTCACCTCCATGCCAGTGCCAAAGCAGCAGCATAACGACGTCTTCCTaGAACCCCCATTGTCAGCAG +
Preference number: 3 (lower is better)
Translates to: SLTSILDCSPPCQCQSSSITTSS*NPHCQQ
Trigger: CTGCTGACAATGGGGGTTCAAGGAAGACGTCGTTAT...GCTGCTGCTTTGGCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR TCA 72 bp CAGGCAGGTATGGGATTCCCAAATGGGACAGCATGGTaGCAACCTGGAAACCCCAAAGGACCCCAGATGGCA +
Preference number: 3 (lower is better)
Translates to: QAGMGFPNGTAW*QPGNPKGPQMA
Trigger: TGCCATCTGGGGTCCTTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCATTTGGGAATCCCATACCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp ATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTaGGGCAGGTGCCCAGCCAGTGTCACTCTGCAGCCC +
Preference number: 3 (lower is better)
Translates to: IKHSAGNPCHWS*GRCPASVTLQP
Trigger: GGGCTGCAGAGTGACACTGGCTGGGCACCTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CAA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGGGCTCTTCAGGCTCGTaGTACCTGGAGGATGCCCAC +
Preference number: 3 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQGSSGS*YLEDAH
Trigger: GTGGGCATCCTCCAGGTACAACGAGCCTGAAGAGCC...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR TCA 72 bp GAGCACCATCTAGATGAGCCTAGTCACGAGGGCCAATaGGGTTTGGGCAAATCTTTGAGCCCCAAGACTGGG +
Preference number: 3 (lower is better)
Translates to: EHHLDEPSHEGQ*GLGKSLSPKTG
Trigger: CCCAGTCTTGGGGCTCAAAGATTTGCCCAAACCTCATTGGCCCTCGTGACTAGGCTCATCTAGATGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp CAGAGCCAGAGATGTGTCCCGGAAAACATCCCCTCGTaGAGATCACAGTGGAAATGCCTCAAACACCAGCGT +
Preference number: 3 (lower is better)
Translates to: QSQRCVPENIPS*RSQWKCLKHQR
Trigger: ACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTTCCGGGACACATCTCTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGGCTCTTCAGGCTCGTaGTACCTGGAGGATGCCCAC +
Preference number: 3 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDGSSGS*YLEDAH
Trigger: GTGGGCATCCTCCAGGTACAACGAGCCTGAAGAGCC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR TCA 72 bp TCGCGAGCTTTTCTGCACCTGTTTTTAAGCGTCAACTaGGCTGGAGGCATATGGGTGACCCTACAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: SRAFLHLFLSVN*AGGIWVTLQCL
Trigger: CAGGCACTGTAGGGTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCTCGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 72 bp CCGGAAAACATCCCCTCGTGGAGATCACAGTGGAAATaGCTCAAACACCAGCGTGAGCACCATCTAGATGAG +
Preference number: 3 (lower is better)
Translates to: PENIPSWRSQWK*LKHQREHHLDE
Trigger: CTCATCTAGATGGTGCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR GCA 72 bp AAACGCAGCCACTTATTCAACCAACCATGTAGGCGCTaGAGAGGAAGGGACCCTGGGTTGAGGGTTCTAATC +
Preference number: 3 (lower is better)
Translates to: KRSHLFNQPCRR*RGRDPGLRVLI
Trigger: GATTAGAACCCTCAACCCAGGGTCCCTTCCTCTGCAGCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp TGTGTCCCGGAAAACATCCCCTCGTGGAGATCACAGTaGAAATGCCTCAAACACCAGCGTGAGCACCATCTA +
Preference number: 3 (lower is better)
Translates to: CVPENIPSWRSQ*KCLKHQREHHL
Trigger: TAGATGGTGCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTTCCGGGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGG +
Preference number: 3 (lower is better)
Translates to: MGKAFSTEADRRFRAPELRMLRI*APGNMG
Trigger: CCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR-3UTR CAA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCTTCAGCTGGAAATCCTaGTCATTGGTCGTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSFSWKS*SLVVGQ
Trigger: CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAA...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CCA 72 bp TATGGGATTCCCAAATGGGACAGCATGGTGACAACCTaGAAACCCCAAAGGACCCCAGATGGCAATGTGACA +
Preference number: 3 (lower is better)
Translates to: YGIPKWDSMVTT*KPQRTPDGNVT
Trigger: TGTCACATTGCCATCTGGGGTCCTTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCATTTGGGAATCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp CAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTaGGCTAAGATTTCTCATCTGGACGATGACATGGTT +
Preference number: 3 (lower is better)
Translates to: QLCDLKQVTPLT*AKISHLDDDMV
Trigger: AACCATGTCATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTTAAAGAAATGCAGTTaGACCTTGCCAGTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKILKKCS*TLPVPP
Trigger: TGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAA...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR TCA 72 bp CGAAACAGGCTCTTGTCCTGCCTTGTCACGGGAGCCTaGGTTTCTATTAACCACCTTCGTTTAAGAATCAGG +
Preference number: 3 (lower is better)
Translates to: RNRLLSCLVTGA*VSINHLRLRIR
Trigger: CCTGATTCTTAAACGAAGGTGGTTAATAGAAACTCAGGCTCCCGTGACAAGGCAGGACAAGAGCCTGTTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGTTAAAGAAATGCAGTTaGACCTTGCCAGTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMLKKCS*TLPVPP
Trigger: TGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAA...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp TCACCTGGGCTAAGATTTCTCATCTGGACGATGACATaGTTGGATGAGATGCTAAAAAGAGCCAGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: SPGLRFLIWTMT*LDEMLKRASRL
Trigger: AAGCCTGCTGGCTCTTTTTAGCATCTCATCCAACCATGTCATCGTCCAGATGAGAAATCTTAGCCCAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CCA 72 bp CTCACTAAGAGGAAAGAAAGCAAAGTCGTCGTCACATaGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCG +
Preference number: 3 (lower is better)
Translates to: LTKRKESKVVVT*SITSKPQFLGS
Trigger: CGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGACGACTTTGCTTTCTTTCCTCTTAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR TCA 72 bp GCTAAGATTTCTCATCTGGACGATGACATGGTTGGATaGGATGCTAAAAAGAGCCAGCAGGCTTGTGTTGAG +
Preference number: 3 (lower is better)
Translates to: AKISHLDDDMVG*DAKKSQQACVE
Trigger: CTCAACACAAGCCTGCTGGCTCTTTTTAGCATCTCATCCAACCATGTCATCGTCCAGATGAGAAATCTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR-3UTR CAA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCAAATGCAGTTTGACCTaGCCAGTGCCTCCAGAAGCC +
Preference number: 3 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIKCSLT*PVPPEA
Trigger: GGCTTCTGGAGGCACTGGCAAGGTCAAACTGCATTT...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGGGAGATGCCCCCGCTaGGGCTGCCAGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLGRCPR*GCQGCP
Trigger: GGGGCATCCCTGGCAGCCTCAGCGGGGGCATCTCCC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGGAGATGCCCCCGCTaGGGCTGCCAGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPGRCPR*GCQGCP
Trigger: GGGGCATCCCTGGCAGCCTCAGCGGGGGCATCTCCC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGTCGCCCTGGCCTTCTaGGCCCGTGTGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSVALAF*ARVQAG
Trigger: CCCCGCCTGCACACGGGCTCAGAAGGCCAGGGCGAC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGAGGTCGTGGACGGCTaGCTGCCCCCACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGEVVDG*LPPLSP
Trigger: GGGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCCGGCTGTCGCCCTaGCCTTCTGAGCCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLARLSP*PSEPVC
Trigger: GCACACGGGCTCAGAAGGCCAGGGCGACAGCCGGGC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTGAGGTCGTGGACGGCTaGCTGCCCCCACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVEVVDG*LPPLSP
Trigger: GGGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTC...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGCCCCGAGCGTCGCTTaGTGGGACTCCGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGAPSVA*WDSVTG
Trigger: ACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCCTTCTGAGCCCGTGTaGAGGCGGGGGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQPSEPV*RRGKSP
Trigger: GGGGCTCTTCCCCCGCCTGCACACGGGCTCAGAAGG...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCTGTGCTGTCACATCGTaGCCGGCTGTCGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLCAVTS*PAVALA
Trigger: GGCCAGGGCGACAGCCGGGCACGATGTGACAGCACA...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGCCTCGCCCTCCCCTaGAGTGCTGCTGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLGLALP*SAADAA
Trigger: AGCAGCGTCAGCAGCACTGCAGGGGAGGGCGAGGCC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGGCCTCGCCCTCCCCTaGAGTGCTGCTGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVGLALP*SAADAA
Trigger: AGCAGCGTCAGCAGCACTGCAGGGGAGGGCGAGGCC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGCTGGGGCTCTCGCTaGTCGGGGACGGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLGWGSR*SGTGCR
Trigger: TCTACAGCCCGTCCCCGAGCAGCGAGAGCCCCAGCC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGGCTGGGGCTCTCGCTaGTCGGGGACGGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQGWGSR*SGTGCR
Trigger: TCTACAGCCCGTCCCCGAGCAGCGAGAGCCCCAGCC...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGGAGAGCGGCCGGTCTaGGAGGGTCGCATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVGERPV*EGRIRA
Trigger: AGCTCGGATGCGACCCTCCCAGACCGGCCGCTCTCC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGAGGTCGTGGACGGCTaGCTGCCCCCACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQEVVDG*LPPLSP
Trigger: GGGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTC...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTCCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSPLTVH*QQGQGS
Trigger: GCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGG...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGGGAGATGCCCCCGCTaGGGCTGCCAGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRGRCPR*GCQGCP
Trigger: GGGGCATCCCTGGCAGCCTCAGCGGGGGCATCTCCC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTGCCCCGAGCGTCGCTTaGTGGGACTCCGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVAPSVA*WDSVTG
Trigger: ACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGC...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGGATGCCCCCACTGTaGGACTTCTTCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLGMPPL*DFFWPP
Trigger: GGGCGGCCAGAAGAAGTCGCACAGTGGGGGCATCCC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCCTTCTGAGCCCGTGTaGAGGCGGGGGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAPSEPV*RRGKSP
Trigger: GGGGCTCTTCCCCCGCCTGCACACGGGCTCAGAAGG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGTCAAAGGGAAGAGACTaGCTCGGGGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGSKGRD*LGAAPP
Trigger: GGGAGGGGCAGCCCCGAGGCAGTCTCTTCCCTTTGA...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACCTCCCTCTCAGCACTaGCCGGGTGGGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVPPSQH*PGGLEV
Trigger: CACTTCCAGCCCACCCGGGCAGTGCTGAGAGGGAGG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGALSLN*LEPRSR
Trigger: CCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCTTGTCAGCAGAGACCTaGGCTCCGGCCTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLLSAET*APAWPS
Trigger: TGAGGGCCAGGCCGGAGCCCAGGTCTCTGCTGACAA...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTAGGGTAGCTAGAGGCTaGGGGAGGAGCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSRVARG*GRSRGV
Trigger: GACCCCTCGGCTCCTCCCCCAGCCTCTAGCTACCCT...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGCCCCGAGCGTCGCTTaGTGGGACTCCGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAAPSVA*WDSVTG
Trigger: ACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGC...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCTCCTGCTTGAAGGGTaGGGTCGTGGACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWLLLEG*GRGRLA
Trigger: AGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGAAACATGGTTGTGGCTaGAGAGCCCGGGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGKHGCG*RARGPS
Trigger: GCTGGGACCCCGGGCTCTGCAGCCACAACCATGTTT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR GCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACCAGCGATGTTGGGGTaGCCACGTTCTCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVPAMLG*PRSPGP
Trigger: AGGACCCGGAGAACGTGGGCACCCCAACATCGCTGG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCCTCCTCACAGATGCTaGTCCCCAGCGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGPPHRC*SPAMLG
Trigger: CCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCACCCTCACCGAGGCTCTaGTCCCACCCCCTACTCTGT +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPPSPRL*SHPLLC
Trigger: ACAGAGTAGGGGGTGGGAGCAGAGCCTCGGTGAGGG...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGTCAAAGGGAAGAGACTaGCTCGGGGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLSKGRD*LGAAPP
Trigger: GGGAGGGGCAGCCCCGAGGCAGTCTCTTCCCTTTGA...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGCCTCCCTCTCAGCACTaGCCGGGTGGGCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQPPSQH*PGGLEV
Trigger: CACTTCCAGCCCACCCGGGCAGTGCTGAGAGGGAGG...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCCCAGCCCCACCAGGCTaGAGGATCAGGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLPAPPG*RIRLGK
Trigger: TTTGCCAAGCCTGATCCTGCAGCCTGGTGGGGCTGG...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGTGGGGTCTCTGTGCCTaGGGTCTCGACCTGCACGAC +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWWGLCA*GLDLHD
Trigger: GTCGTGCAGGTCGAGACCCCAGGCACAGAGACCCCA...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGGGACTGGGCAGAGGTaGACCAAAGGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGGTGQR*TKGGHI
Trigger: GATGTGCCCACCTTTGGTCCACCTCTGCCCAGTCCC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCATGGTCTCCATGGAGTaGCTGCGTACGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLMVSME*LRTRMA
Trigger: GGCCATCCGCGTACGCAGCCACTCCATGGAGACCAT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCCACCATGGTCTCCATaGAGTGGCTGCGTACGCGGA +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGPPWSP*SGCVRG
Trigger: TCCGCGTACGCAGCCACTCCATGGAGACCATGGTGG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGTCTGGCCGCCCACCATaGTCTCCATGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLSGRPP*SPWSGC
Trigger: GCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGA...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTATCTGGCCGCCCACCATaGTCTCCATGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVSGRPP*SPWSGC
Trigger: GCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGA...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCGTTGCCGCCACCACTaGAGGCGAGAAGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGRCRHH*RREGGL
Trigger: AAGACCACCTTCTCGCCTCCAGTGGTGGCGGCAACG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCGCCCGGCTGTCGCCCTaGCCTTCTGAGCCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFARLSP*PSEPVC
Trigger: GCACACGGGCTCAGAAGGCCAGGGCGACAGCCGGGC...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGCCCGGCTGTCGCCCTaGCCTTCTGAGCCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRARLSP*PSEPVC
Trigger: GCACACGGGCTCAGAAGGCCAGGGCGACAGCCGGGC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGAGGTCGTGGACGGCTaGCTGCCCCCACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHREVVDG*LPPLSP
Trigger: GGGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGGCTCCTGGGAACATaGGGCCTCCACCACCGAGTG +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSWLLGT*GLHHRV
Trigger: CACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCA...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGTGTGCAGCGCAGTTCTaGCCCGTCCAGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLCAAQF*PVQLWL
Trigger: GAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACA...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGTCAGGAGAAACCGGGTaGGACCCAAAGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGSGETG*DPKSPP
Trigger: AGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGA...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGTGTGGCAGGATGACCTaGGGGTACGGGCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQCGRMT*GYGPPF
Trigger: GAAGGGAGGCCCGTACCCTCAGGTCATCCTGCCACA...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACAAACTGTGGCAGGATaGCCTGAGGGTACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVQTVAG*PEGTGL
Trigger: GAGGCCCGTACCCTCAGGTCATCCTGCCACAGTTTG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGCCCCGAGCGTCGCTTaGTGGGACTCCGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTAPSVA*WDSVTG
Trigger: ACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGTCGCCCTGGCCTTCTaGGCCCGTGTGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGVALAF*ARVQAG
Trigger: CCCCGCCTGCACACGGGCTCAGAAGGCCAGGGCGAC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCACCCCAGATGGCAATGTaGCACGGCCCATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPPQMAM*HGPSTK
Trigger: CTTGGTGGATGGGCCGTGTCACATTGCCATCTGGGG...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCACCTCCTCACAGATGCTaGTCCCCAGCGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPPPHRC*SPAMLG
Trigger: CCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGG...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCAGGATGGGGTCTCTGTaGCTGGGGTCTCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSRMGSL*LGSRPA
Trigger: TGCAGGTCGAGACCCCAGGCACAGAGACCCCATCCT...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGGGGATGCCCCCACTGTaGGACTTCTTCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGGMPPL*DFFWPP
Trigger: GGGCGGCCAGAAGAAGTCGCACAGTGGGGGCATCCC...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCTGGTTCTTCACCGTTaGCGCCACCACTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWLVLHR*RHHWRR
Trigger: TCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAACCTTCTGAGCCCGTGTaGAGGCGGGGGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEPSEPV*RRGKSP
Trigger: GGGGCTCTTCCCCCGCCTGCACACGGGCTCAGAAGG...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTGTGCTGTCACATCGTaGCCGGCTGTCGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPCAVTS*PAVALA
Trigger: GGCCAGGGCGACAGCCGGGCACGATGTGACAGCACA...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGTGGGTGTGCTGGATGTaGTGTCACATCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLWVCWM*CHIVPG
Trigger: GCCGGGCACGATGTGACAGCACATCCAGCACACCCA...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGGGCCTCGCCCTCCCCTaGAGTGCTGCTGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVGLALP*SAADAA
Trigger: AGCAGCGTCAGCAGCACTGCAGGGGAGGGCGAGGCC...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGCCCTCACCGAGGCTCTaGTCCCACCCCCTACTCTGT +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQPSPRL*SHPLLC
Trigger: ACAGAGTAGGGGGTGGGAGCAGAGCCTCGGTGAGGG...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCTCCAGGAACCCGAGCTaGCCGCCCCGTGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFSRNPS*PPRGLG
Trigger: CCCTAGACCACGGGGCGGGCAGCTCGGGTTCCTGGA...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGACAGGACAGAGCCGCTaGCCCACAGCCTCTCACTCG +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQTGQSR*PTASHS
Trigger: CGAGTGAGAGGCTGTGGGGCAGCGGCTCTGTCCTGT...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGGCCAAACATGGTTGTaGCTGCAGAGCCCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQGQTWL*LQSPGS
Trigger: GGACCCCGGGCTCTGCAGCCACAACCATGTTTGGCC...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGGAGAGCGGCCGGTCTaGGAGGGTCGCATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEGERPV*EGRIRA
Trigger: AGCTCGGATGCGACCCTCCCAGACCGGCCGCTCTCC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGCTCCCCAGCGATGTTaGGGTGCCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPAPQRC*GAHVLR
Trigger: CCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGCCTCCGGTAGGCCCTaGCTTCACCCTTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAASGRP*LHPCTR
Trigger: TCGAGTGCAAGGGTGAAGCCAGGGCCTACCGGAGGC...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTTGGGGTCTCTGTGCCTaGGGTCTCGACCTGCACGAC +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAWGLCA*GLDLHD
Trigger: GTCGTGCAGGTCGAGACCCCAGGCACAGAGACCCCA...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGTGGACCAAAGGTaGGCACATCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWEVDQR*AHLPAQ
Trigger: CTGCGCGGGAAGATGTGCCCACCTTTGGTCCACCTC...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGATGGTCTCCATGGAGTaGCTGCGTACGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWMVSME*LRTRMA
Trigger: GGCCATCCGCGTACGCAGCCACTCCATGGAGACCAT...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGATGGTCTCCATGGAGTaGCTGCGTACGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQMVSME*LRTRMA
Trigger: GGCCATCCGCGTACGCAGCCACTCCATGGAGACCAT...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGTGCGACTTCTTCTaGCCGCCCACCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQLCDFF*PPTMVS
Trigger: GGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAG...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGACCTCCATGCTGTTGTaGGAGATGCCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWTSMLL*EMPPLR
Trigger: CCTCAGCGGGGGCATCTCCCACAACAGCATGGAGGT...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGACCTCCATGCTGTTGTaGGAGATGCCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQTSMLL*EMPPLR
Trigger: CCTCAGCGGGGGCATCTCCCACAACAGCATGGAGGT...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLTNLGS*EHGAST
Trigger: GGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTCAAGGGCACAGTAGCTaGAAAAGGCCCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVQGHSS*KRPQGQ
Trigger: CTGGCCCTGGGGCCTTTTCCAGCTACTGTGCCCTTG...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTCCTTGTCATTGGTCGTaGGGCAGGTGCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSPCHWS*GRCPAS
Trigger: ACTGGCTGGGCACCTGCCCCACGACCAATGACAAGG...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGTCAGCACTGCCCGGGTaGGCTGGAAGTGCACACTCT +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQSALPG*AGSAHS
Trigger: AGAGTGTGCACTTCCAGCCCACCCGGGCAGTGCTGA...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGTCAGCACTGCCCGGGTaGGCTGGAAGTGCACACTCT +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLSALPG*AGSAHS
Trigger: AGAGTGTGCACTTCCAGCCCACCCGGGCAGTGCTGA...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCCAGCTCCTGCTTCTTaGCCTTCAGACTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGPAPAS*PSDLPA
Trigger: TGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCAAACTGTGGCAGGATaGCCTGAGGGTACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAQTVAG*PEGTGL
Trigger: GAGGCCCGTACCCTCAGGTCATCCTGCCACAGTTTG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCCTGCTTCCTCGCACTTaGCGGACAGGATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLLLPRT*RTGSSS
Trigger: GGAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAG...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCAGAAGGTGGTCTTGGTaGCCTCCATGCTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLRRWSW*PPCCCG
Trigger: CCCACAACAGCATGGAGGTCACCAAGACCACCTTCT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGGTGGGTCACAGGGTCTaGCCCACACCCAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGVGHRV*PTPRWG
Trigger: ACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCAC...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGCCCCAGATGGCAATGTaGCACGGCCCATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQPQMAM*HGPSTK
Trigger: CTTGGTGGATGGGCCGTGTCACATTGCCATCTGGGG...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTCCTCACCAGCATCCTTaGCTGCTCACCTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSPHQHP*LLTSMP
Trigger: TGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGG...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCCCCCAAAGGAGACACTaGGCTTCCGGCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSPQRRH*ASGQTW
Trigger: CCATGTTTGGCCGGAAGCGCAGTGTCTCCTTTGGGG...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR GCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTATGGGGTCCCGGCTTCTaGTCTTCAAGCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVWGPGF*SSSLIP
Trigger: GGGGATCAAGCTTGAAGAGCAGAAGCCGGGACCCCA...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGGGGTCCCGGCTTCTaGTCTTCAAGCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSWGPGF*SSSLIP
Trigger: GGGGATCAAGCTTGAAGAGCAGAAGCCGGGACCCCA...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGGACACTGGGAAGCTTaGTCAGTCCAGCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVGHWEA*SVQPRG
Trigger: TCCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACTCTTTCTCTGGAGCTaGTGGGCGTCTCCGTCGGTA +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVLFLWS*WASPSV
Trigger: TACCGACGGAGACGCCCAGCAGCTCCAGAGAAAGAG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGGGGATGCCCCCACTGTaGGACTTCTTCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVGMPPL*DFFWPP
Trigger: GGGCGGCCAGAAGAAGTCGCACAGTGGGGGCATCCC...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGGGATGCCCCCACTGTaGGACTTCTTCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVGMPPL*DFFWPP
Trigger: GGGCGGCCAGAAGAAGTCGCACAGTGGGGGCATCCC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATGTGCTGTCACATCGTaGCCGGCTGTCGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRCAVTS*PAVALA
Trigger: GGCCAGGGCGACAGCCGGGCACGATGTGACAGCACA...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGGGCTGGGGCTCTCGCTaGTCGGGGACGGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVGWGSR*SGTGCR
Trigger: TCTACAGCCCGTCCCCGAGCAGCGAGAGCCCCAGCC...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCATCAGTCCAGGAAGTGTaGAGCGCAGTTCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPSVQEV*SAVLAR
Trigger: ACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGA...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCTCAAAGGGAAGAGACTaGCTCGGGGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTSKGRD*LGAAPP
Trigger: GGGAGGGGCAGCCCCGAGGCAGTCTCTTCCCTTTGA...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCTTCAGATGTGACAGCTaGCTACAGACCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLFRCDS*LQTRSW
Trigger: CCAGCTGCGGGTCTGTAGGCAGCTGTCACATCTGAA...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCACTCTGCAGCCCCGTCTaGACTGAAAGGGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPLCSPV*TERGSS
Trigger: TGAAGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAG...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCAGCTCCCCAGCGATGTTaGGGTGCCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPAAPQRC*GAHVLR
Trigger: CCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGC...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGCTCCCCAGCGATGTTaGGGTGCCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRAPQRC*GAHVLR
Trigger: CCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGGGACTGGGCAGAGGTaGACCAAAGGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAGTGQR*TKGGHI
Trigger: GATGTGCCCACCTTTGGTCCACCTCTGCCCAGTCCC...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTACCTCCATGCTGTTGTaGGAGATGCCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPATSMLL*EMPPLR
Trigger: CCTCAGCGGGGGCATCTCCCACAACAGCATGGAGGT...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGCGTTGCCGCCACCACTaGAGGCGAGAAGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQRCRHH*RREGGL
Trigger: AAGACCACCTTCTCGCCTCCAGTGGTGGCGGCAACG...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAATGGGACTCCGTGACTaGTTCTTCACCGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVMGLRD*FFTVAA
Trigger: GGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCAT...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGGGTCTTGGGTGTGCTaGATGTGCTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLGSWVC*MCCHIV
Trigger: CACGATGTGACAGCACATCCAGCACACCCAAGACCC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCCACCATCTGGGGTCTTaGGTGTGCTGGATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLHHLGS*VCWMCC
Trigger: ACAGCACATCCAGCACACCCAAGACCCCAGATGGTG...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTGGAGTGTCCACCATCTaGGGTCTTGGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVGVSTI*GLGCAG
Trigger: TCCAGCACACCCAAGACCCCAGATGGTGGACACTCC...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGAGTGTCCACCATCTaGGGTCTTGGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPGVSTI*GLGCAG
Trigger: TCCAGCACACCCAAGACCCCAGATGGTGGACACTCC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCAGGAGGAGCGGGAGATaGCACGGCCGTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSRRSGR*HGRFPS
Trigger: TGAAGGAAAACGGCCGTGCCATCTCCCGCTCCTCCT...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGCACCAGAGCTGGCATaGCTGAGCTTGTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWAPELA*LSLSKR
Trigger: CCGCTTTGACAAGCTCAGCCATGCCAGCTCTGGTGC...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPTNLGS*EHGAST
Trigger: GGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGT...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGCCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVPLTVH*QQGQGS
Trigger: GCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGG...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCTGTGCAGCGCAGTTCTaGCCCGTCCAGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTCAAQF*PVQLWL
Trigger: GAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACA...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTTGTCAGCAGAGACCTaGGCTCCGGCCTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPLSAET*APAWPS
Trigger: TGAGGGCCAGGCCGGAGCCCAGGTCTCTGCTGACAA...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCCTACAGACCCGCAGCTaGAGAGGGGAACAGGATTGG +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSLQTRS*RGEQDW
Trigger: CCAATCCTGTTCCCCTCTCCAGCTGCGGGTCTGTAG...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGAGGGTAGCTAGAGGCTaGGGGAGGAGCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRRVARG*GRSRGV
Trigger: GACCCCTCGGCTCCTCCCCCAGCCTCTAGCTACCCT...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTAGGGAGACATGGGATTaGGGTGTACAAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVRETWD*GVQGAG
Trigger: GCCAGCCCCTTGTACACCCCAATCCCATGTCTCCCT...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCCAAACTGTGGCAGGATaGCCTGAGGGTACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTQTVAG*PEGTGL
Trigger: GAGGCCCGTACCCTCAGGTCATCCTGCCACAGTTTG...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCCAAATGTGTTGGGGCTaGGGTTGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLQMCWG*GCPLPP
Trigger: AGGAGGAAGAGGACAACCTCAGCCCCAACACATTTG...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGCATCTTCCCGCGCAGTaGCAGAGACCTTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLHLPAQ*QRPCRM
Trigger: CATCCTACAAGGTCTCTGTCACTGCGCGGGAAGATG...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCATCTTCCCGCGCAGTaGCAGAGACCTTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWHLPAQ*QRPCRM
Trigger: CATCCTACAAGGTCTCTGTCACTGCGCGGGAAGATG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCGCGTGGAGCTCATCGTaGAGGTTGTCCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPAWSSS*RLSRRA
Trigger: TGCCCTCCTGGACAACCTTCACGATGAGCTCCACGC...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGAGAAGGTGGTCTTGGTaGCCTCCATGCTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQRRWSW*PPCCCG
Trigger: CCCACAACAGCATGGAGGTCACCAAGACCACCTTCT...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCAGAAGGTGGTCTTGGTaGCCTCCATGCTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSRRWSW*PPCCCG
Trigger: CCCACAACAGCATGGAGGTCACCAAGACCACCTTCT...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCGTCGCCCTGGCCTTCTaGGCCCGTGTGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIVALAF*ARVQAG
Trigger: CCCCGCCTGCACACGGGCTCAGAAGGCCAGGGCGAC...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGTCGCCCTGGCCTTCTaGGCCCGTGTGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYVALAF*ARVQAG
Trigger: CCCCGCCTGCACACGGGCTCAGAAGGCCAGGGCGAC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGGAGCAGGAGGAACCTaGGGAAGGAGGCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRGAGGT*GRRPRP
Trigger: TGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCGGATGTCCTTGGAGGTaGGCTGGCTGTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPGCPWR*AGCPSK
Trigger: CTTGCTGGGACAGCCAGCTCACCTCCAAGGACATCC...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCCCCGTCTGCACTaGAAGGGGCTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVQPRLH*KGLFRL
Trigger: GAGCCTGAAGAGCCCCTTTCAGTGCAGACGGGGCTG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGGCCCCCATCAGGAGCTaGAGAACCGATCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGAPIRS*RTDPTE
Trigger: CTCAGTGGGATCGGTTCTTCAGCTCCTGATGGGGGC...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGAAGCTGAGGGTGGGTaGACAGCATCTTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGEAEGG*TASFSL
Trigger: CAGGGAAAAAGATGCTGTTCACCCACCCTCAGCTTC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGGAGCCGAGGGGTCCTaGGCATGGCTGACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGGAEGS*AWLTGL
Trigger: CAGGCCAGTCAGCCATGCTCAGGACCCCTCGGCTCC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCGAGGTCAGCCCGGCTaGGGATGCGATGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGRGQPG*GCDAAA
Trigger: CGCAGCAGCATCGCATCCTCAGCCGGGCTGACCTCG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637138.1
CDS-3UTR GCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGAAACATGGTTGTGGCTaGAGAGCCCGGGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGKHGCG*RARGPS
Trigger: GCTGGGACCCCGGGCTCTGCAGCCACAACCATGTTT...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCAGCGATGTTGGGGTaGCCACGTTCTCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVPAMLG*PRSPGP
Trigger: AGGACCCGGAGAACGTGGGCACCCCAACATCGCTGG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCCCTCCTCACAGATGCTaGTCCCCAGCGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPPPHRC*SPAMLG
Trigger: CCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGG...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCCTCCTCCTCACAGATaGTGCTCCCCAGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAPPPHR*CSPAML
Trigger: CAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCCTGGCTTCACCCTTaGACTCGAGCTTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWPWLHP*TRACSQ
Trigger: TTGGCTACAAGCTCGAGTGCAAGGGTGAAGCCAGGG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGTACTCGATCCCCTCTaGTTCCTCGCACTTGACGGA +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSVLDPL*FLALDG
Trigger: TCCGTCAAGTGCGAGGAAGCAGAGGGGATCGAGTAC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCAGGATGGGGTCTCTGTaGCTGGGGTCTCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTRMGSL*LGSRPA
Trigger: TGCAGGTCGAGACCCCAGGCACAGAGACCCCATCCT...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCAGGATGGGGTCTCTGTaGCTGGGGTCTCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPRMGSL*LGSRPA
Trigger: TGCAGGTCGAGACCCCAGGCACAGAGACCCCATCCT...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCCAAACTTGTCCGACTTaGAGCAGGCGTTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLQTCPT*SRRSRH
Trigger: ATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTG...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCAAACTTGTCCGACTTaGAGCAGGCGTTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGQTCPT*SRRSRH
Trigger: ATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGTCTCCATGGAGTGGCTaGGTACGCGGATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGSPWSG*VRGWPS
Trigger: AGAGGGCCATCCGCGTACGCAGCCACTCCATGGAGA...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCTCTCCATGGAGTGGCTaGGTACGCGGATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTSPWSG*VRGWPS
Trigger: AGAGGGCCATCCGCGTACGCAGCCACTCCATGGAGA...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCCCTCACCGAGGCTCTaGTCCCACCCCCTACTCTGT +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVPSPRL*SHPLLC
Trigger: ACAGAGTAGGGGGTGGGAGCAGAGCCTCGGTGAGGG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCCCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCATTCAGATGTGACAGCTaGCTACAGACCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPFRCDS*LQTRSW
Trigger: CCAGCTGCGGGTCTGTAGGCAGCTGTCACATCTGAA...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCAACAGGACAGAGCCGCTaGCCCACAGCCTCTCACTCG +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPATGQSR*PTASHS
Trigger: CGAGTGAGAGGCTGTGGGGCAGCGGCTCTGTCCTGT...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGATAGCCCCCAAACTGTaGCAGGATGACCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGIAPKL*QDDLRV
Trigger: TACCCTCAGGTCATCCTGCCACAGTTTGGGGGCTAT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGCCTCCGGTAGGCCCTaGCTTCACCCTTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVASGRP*LHPCTR
Trigger: TCGAGTGCAAGGGTGAAGCCAGGGCCTACCGGAGGC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTAGAGACCTTGTAGGATaGGGTCTCTGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVRDLVG*GLCAWG
Trigger: ACCCCAGGCACAGAGACCCCATCCTACAAGGTCTCT...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGAGGTGGACCAAAGGTaGGCACATCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPEVDQR*AHLPAQ
Trigger: CTGCGCGGGAAGATGTGCCCACCTTTGGTCCACCTC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGGTGGACCAAAGGTaGGCACATCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTEVDQR*AHLPAQ
Trigger: CTGCGCGGGAAGATGTGCCCACCTTTGGTCCACCTC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGGACTGGGCAGAGGTaGACCAAAGGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPGTGQR*TKGGHI
Trigger: GATGTGCCCACCTTTGGTCCACCTCTGCCCAGTCCC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCTCTGGCCGCCCACCATaGTCTCCATGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVSGRPP*SPWSGC
Trigger: GCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGA...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCATCTGGCCGCCCACCATaGTCTCCATGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPASGRPP*SPWSGC
Trigger: GCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGA...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCCGTTGCCGCCACCACTaGAGGCGAGAAGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPRCRHH*RREGGL
Trigger: AAGACCACCTTCTCGCCTCCAGTGGTGGCGGCAACG...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGGGAGTTTCTGCTTTTaGCATCTGTGGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSGSFCF*HLWDSG
Trigger: GCCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTGGATGCTACGAATCTTaGCTCCTGGGAACATGGGGC +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVGCYES*LLGTWG
Trigger: GCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCC...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGGATGCTACGAATCTTaGCTCCTGGGAACATGGGGC +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQGCYES*LLGTWG
Trigger: GCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCC...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGCCTACGTCAGCAGATaGGAAAGGCGTTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVAYVSR*ERRSAQ
Trigger: CTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATGTGCAGCGCAGTTCTaGCCCGTCCAGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRCAAQF*PVQLWL
Trigger: GAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACA...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTCAGGAGAAACCGGGTaGGACCCAAAGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPSGETG*DPKSPP
Trigger: AGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGA...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGTCCTTGGAGGTGAGCTaGCTGTCCCAGCAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRSLEVS*LSQQGG
Trigger: GCCCCCTTGCTGGGACAGCCAGCTCACCTCCAAGGA...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCAAAGGACCCCAGATaGCAATGTGACACGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWPKDPR*QCDTAH
Trigger: ATGGGCCGTGTCACATTGCCATCTGGGGTCCTTTGG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGCTGAGCATGGCTGACTaGCCTGGTCCCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRLSMAD*PGPCWP
Trigger: AGGCCAGCAGGGACCAGGCCAGTCAGCCATGCTCAG...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGACTGAGCATGGCTGACTaGCCTGGTCCCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRLSMAD*PGPCWP
Trigger: AGGCCAGCAGGGACCAGGCCAGTCAGCCATGCTCAG...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCAAACTGTGGCAGGATaGCCTGAGGGTACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVQTVAG*PEGTGL
Trigger: GAGGCCCGTACCCTCAGGTCATCCTGCCACAGTTTG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCAAATGTGTTGGGGCTaGGGTTGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWQMCWG*GCPLPP
Trigger: AGGAGGAAGAGGACAACCTCAGCCCCAACACATTTG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGAAAGCCTTTGCAATCTaGGGGACACTGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGKAFAI*GTLGSL
Trigger: CAAGCTTCCCAGTGTCCCTCAGATTGCAAAGGCTTT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGGTACAGGACAGGATTaGATCTCAGTCCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLGTGQD*ISVPLH
Trigger: ATGCAGTGGGACTGAGATTCAATCCTGTCCTGTACC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGAATGTTGTGTACACTaGTTCCACCCCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGECCVH*FHPCLS
Trigger: GGACAGACAGGGGTGGAATCAGTGTACACAACATTC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGCGTGGAGCTCATCGTaGAGGTTGTCCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEAWSSS*RLSRRA
Trigger: TGCCCTCCTGGACAACCTTCACGATGAGCTCCACGC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAGGGAGATGCCCCCGCTaGGGCTGCCAGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKGRCPR*GCQGCP
Trigger: GGGGCATCCCTGGCAGCCTCAGCGGGGGCATCTCCC...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTAGAAGGTGGTCTTGGTaGCCTCCATGCTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPARRWSW*PPCCCG
Trigger: CCCACAACAGCATGGAGGTCACCAAGACCACCTTCT...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGCAGAGCTGGCATGGCTaGGCTTGTCAAAGCGGAATT +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLQSWHG*ACQSGI
Trigger: AATTCCGCTTTGACAAGCTCAGCCATGCCAGCTCTG...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGCTCCTTTGCTCTCCCTaGATTCCTTCTCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLLLCSP*IPSHSW
Trigger: CCAGGAGTGAGAAGGAATTCAGGGAGAGCAAAGGAG...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGCAGCCCCGTCTGCACTaGAAGGGGCTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVQPRLH*KGLFRL
Trigger: GAGCCTGAAGAGCCCCTTTCAGTGCAGACGGGGCTG...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAAGCTGAGGGTGGGTaGACAGCATCTTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWEAEGG*TASFSL
Trigger: CAGGGAAAAAGATGCTGTTCACCCACCCTCAGCTTC...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGCCTCCTGTACCCATaGGATCTACTCGAACCCCCA +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPGLLYP*DLLEPP
Trigger: TGGGGGTTCGAGTAGATCTCATGGGTACAGGAGGCC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGTCTTGTCGATCCTCTaGCCTCCATCCCGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTVLSIL*PPSRSA
Trigger: AGCTGACCGGGATGGAGGTCAGAGGATCGACAAGAC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS-3UTR GCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGGGGTCCCGGCTTCTaGTCTTCAAGCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPWGPGF*SSSLIP
Trigger: GGGGATCAAGCTTGAAGAGCAGAAGCCGGGACCCCA...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGTACTCGATCCCCTCTaGTTCCTCGCACTTGACGGA +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAVLDPL*FLALDG
Trigger: TCCGTCAAGTGCGAGGAAGCAGAGGGGATCGAGTAC...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCCTCTTTCTCTGGAGCTaGTGGGCGTCTCCGTCGGTA +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPLFLWS*WASPSV
Trigger: TACCGACGGAGACGCCCAGCAGCTCCAGAGAAAGAG...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCAGGATGGGGTCTCTGTaGCTGGGGTCTCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVRMGSL*LGSRPA
Trigger: TGCAGGTCGAGACCCCAGGCACAGAGACCCCATCCT...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGCCGGTCCTCCAGCTTTaGAAACTTGTCCGACTTGCA +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLPVLQL*KLVRLA
Trigger: TGCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGG...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCTCTCCATGGAGTGGCTaGGTACGCGGATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVSPWSG*VRGWPS
Trigger: AGAGGGCCATCCGCGTACGCAGCCACTCCATGGAGA...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCTGGTTCTTCACCGTTaGCGCCACCACTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVLVLHR*RHHWRR
Trigger: TCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGATCTCGGGGAGTTTCTaGTTTTGGCATCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGISGSF*FWHLWD
Trigger: GTCCCACAGATGCCAAAAGCAGAAACTCCCCGAGAT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCATCTCGGGGAGTTTCTaGTTTTGGCATCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLISGSF*FWHLWD
Trigger: GTCCCACAGATGCCAAAAGCAGAAACTCCCCGAGAT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAACCATGTAGGCGCTaGAGAGGAAGGGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVQPCRR*RGRDPG
Trigger: CCCAGGGTCCCTTCCTCTGCAGCGCCTACATGGTTG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCACCAGCCCCACCAGGCTaGAGGATCAGGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPAPAPPG*RIRLGK
Trigger: TTTGCCAAGCCTGATCCTGCAGCCTGGTGGGGCTGG...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTATGTGTCTCTTTCTCTaGAGCTGCTGGGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAMCLFL*SCWASP
Trigger: CGGAGACGCCCAGCAGCTCCAGAGAAAGAGACACAT...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGGGGACTGGGCAGAGGTaGACCAAAGGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVGTGQR*TKGGHI
Trigger: GATGTGCCCACCTTTGGTCCACCTCTGCCCAGTCCC...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTCTGGCCGCCCACCATaGTCTCCATGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVSGRPP*SPWSGC
Trigger: GCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCGTTGCCGCCACCACTaGAGGCGAGAAGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVRCRHH*RREGGL
Trigger: AAGACCACCTTCTCGCCTCCAGTGGTGGCGGCAACG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGCCCGGCTGTCGCCCTaGCCTTCTGAGCCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIARLSP*PSEPVC
Trigger: GCACACGGGCTCAGAAGGCCAGGGCGACAGCCGGGC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCAGGAGGAGCGGGAGATaGCACGGCCGTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPRRSGR*HGRFPS
Trigger: TGAAGGAAAACGGCCGTGCCATCTCCCGCTCCTCCT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGGAGGAGCGGGAGATaGCACGGCCGTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPRRSGR*HGRFPS
Trigger: TGAAGGAAAACGGCCGTGCCATCTCCCGCTCCTCCT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGGGAGTTTCTGCTTTTaGCATCTGTGGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQGSFCF*HLWDSG
Trigger: GCCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCC...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPTNLGS*EHGAST
Trigger: GGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGTGCAGCGCAGTTCTaGCCCGTCCAGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVCAAQF*PVQLWL
Trigger: GAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGATTCCTTCTCACTCCTaGCTTCCCACCCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLIPSHS*LPTPLW
Trigger: CCACAAAGGGGTGGGAAGCCAGGAGTGAGAAGGAAT...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGCTCTCCTCGAGTAAGTaGGGAGGGGAGATAACGACG +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQLSSSK*GGEITT
Trigger: CGTCGTTATCTCCCCTCCCCACTTACTCGAGGAGAG...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTCCTTGGAGGTGAGCTaGCTGTCCCAGCAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVSLEVS*LSQQGG
Trigger: GCCCCCTTGCTGGGACAGCCAGCTCACCTCCAAGGA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTAGCATGGTGACAACCTaGAAACCCCAAAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVSMVTT*KPQRTP
Trigger: TGGGGTCCTTTGGGGTTTCCAGGTTGTCACCATGCT...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCTTGGCAAACTTTACTaGCCTCCCCTTGCCTCGATA +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGLGKLY*PPLASI
Trigger: TATCGAGGCAAGGGGAGGCCAGTAAAGTTTGCCAAG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTCTGCAGGATCAGGCTTaGCAAACTTTACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSLQDQA*QTLLAS
Trigger: GGAGGCCAGTAAAGTTTGCCAAGCCTGATCCTGCAG...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACTGCAGGATCAGGCTTaGCAAACTTTACTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVLQDQA*QTLLAS
Trigger: GGAGGCCAGTAAAGTTTGCCAAGCCTGATCCTGCAG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGTCAGACTTGCCAGCATaGTCTTGTCGATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLSDLPA*SCRSWR
Trigger: CCTCCAGGATCGACAAGACCATGCTGGCAAGTCTGA...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637138.1
3UTR CAA 72 bp GCAGGATCAGGCTTGGCAAACTTTACTGGCCTCCCCTaGCCTCGATACAGGGTAGCTAGAGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AGSGLANFTGLP*PRYRVARGWGR
Trigger: CCTCCCCCAGCCTCTAGCTACCCTGTATCGAGGCAAGGGGAGGCCAGTAAAGTTTGCCAAGCCTGATCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCCCAGCTCCTGCTTCTTaGCCTTCAGACTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPPAPAS*PSDLPA
Trigger: TGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGG...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTTGTGGCAGGATGACCTaGGGGTACGGGCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPCGRMT*GYGPPF
Trigger: GAAGGGAGGCCCGTACCCTCAGGTCATCCTGCCACA...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGCTGCTTCCTCGCACTTaGCGGACAGGATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGLLPRT*RTGSSS
Trigger: GGAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAG...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCCTGCTTCCTCGCACTTaGCGGACAGGATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPLLPRT*RTGSSS
Trigger: GGAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAG...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAAAAGCCTTTGCAATCTaGGGGACACTGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVKAFAI*GTLGSL
Trigger: CAAGCTTCCCAGTGTCCCTCAGATTGCAAAGGCTTT...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGAAAGCCTTTGCAATCTaGGGGACACTGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWKAFAI*GTLGSL
Trigger: CAAGCTTCCCAGTGTCCCTCAGATTGCAAAGGCTTT...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGGGAGATGCCCCCGCTaGGGCTGCCAGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAGRCPR*GCQGCP
Trigger: GGGGCATCCCTGGCAGCCTCAGCGGGGGCATCTCCC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGCTTGATGGGACTCCGTaGCTGGTTCTTCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPLDGTP*LVLHRC
Trigger: GCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAG...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAAACACCTCCTGCTTaGAGGGTGAGGTCGTGGACG +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVQTPPA*RVRSWT
Trigger: CGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTAATGGGACAGCATGGTaGCAACCTGGAAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVNGTAW*QPGNPK
Trigger: TTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCATT...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGGTTTGGGCAAATCTTTaGGCCCCAAGACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGVWANL*APRLGA
Trigger: TGCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAAC...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGGCCTCCTGTACCCATaGGATCTACTCGAACCCCCA +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRGLLYP*DLLEPP
Trigger: TGGGGGTTCGAGTAGATCTCATGGGTACAGGAGGCC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACCACAACCTCGTCGATaGTGGGGTATGGGATATAGT +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVPQPRR*WGMGYS
Trigger: ACTATATCCCATACCCCAGCATCGACGAGGTTGTGG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGCCACAACCTCGTCGATaGTGGGGTATGGGATATAGT +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLPQPRR*WGMGYS
Trigger: ACTATATCCCATACCCCAGCATCGACGAGGTTGTGG...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGCCTCCTCACAGATGCTaGTCCCCAGCGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVPPHRC*SPAMLG
Trigger: CCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGG...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAACCTCCTCCTCACAGATaGTGCTCCCCAGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEPPPHR*CSPAML
Trigger: CAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGG...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCCCCTGGCTTCACCCTTaGACTCGAGCTTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPPWLHP*TRACSQ
Trigger: TTGGCTACAAGCTCGAGTGCAAGGGTGAAGCCAGGG...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGAGTTCCCCAGGCTGCTaGCGGTACAGTAAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGSSPGC*RYSKSL
Trigger: TAAACTTTTACTGTACCGGCAGCAGCCTGGGGAACT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGGACACTGGGAAGCTTaGTCAGTCCAGCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEGHWEA*SVQPRG
Trigger: TCCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCATCACAGAAAGCCTTTaGAATCTGAGGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLITESL*NLRDTG
Trigger: CCCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGAT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCTCTTTCTCTGGAGCTaGTGGGCGTCTCCGTCGGTA +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVLFLWS*WASPSV
Trigger: TACCGACGGAGACGCCCAGCAGCTCCAGAGAAAGAG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCAAACTTGTCCGACTTaGAGCAGGCGTTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPAQTCPT*SRRSRH
Trigger: ATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCGGCCTCGCCCTCCCCTaGAGTGCTGCTGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIGLALP*SAADAA
Trigger: AGCAGCGTCAGCAGCACTGCAGGGGAGGGCGAGGCC...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGGGCCTCGCCCTCCCCTaGAGTGCTGCTGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQGLALP*SAADAA
Trigger: AGCAGCGTCAGCAGCACTGCAGGGGAGGGCGAGGCC...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCGGCTGGGGCTCTCGCTaGTCGGGGACGGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIGWGSR*SGTGCR
Trigger: TCTACAGCCCGTCCCCGAGCAGCGAGAGCCCCAGCC...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGCTGGGGCTCTCGCTaGTCGGGGACGGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYGWGSR*SGTGCR
Trigger: TCTACAGCCCGTCCCCGAGCAGCGAGAGCCCCAGCC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQTALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCCTCACCGAGGCTCTaGTCCCACCCCCTACTCTGT +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPPSPRL*SHPLLC
Trigger: ACAGAGTAGGGGGTGGGAGCAGAGCCTCGGTGAGGG...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFASTTE*VPGSKA
Trigger: GGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGTCAGTCCAGGAAGTGTaGAGCGCAGTTCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRSVQEV*SAVLAR
Trigger: ACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGA...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGTCAGTCCAGGAAGTGTaGAGCGCAGTTCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVSVQEV*SAVLAR
Trigger: ACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGA...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCCCACACAGGGGAATCTaGACATTCACACGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPPHRGI*TFTRQQ
Trigger: CTGCTGGCGTGTGAATGTGCAGATTCCCCTGTGTGG...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAATAGGTGGACGTGTGTaGAGCGCCCCGCCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELIGGRV*SAPPAG
Trigger: CCCCGCGGGCGGGGCGCTGCACACACGTCCACCTAT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS-3UTR CCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTTCAGACTTGCCAGCATaGTCTTGTCGATCCATCCGA +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSSDLPA*SCRSIR
Trigger: TCGGATGGATCGACAAGACCATGCTGGCAAGTCTGA...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGAGAGCGGCCGGTCTaGGAGGGTCGCATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYGERPV*EGRIRA
Trigger: AGCTCGGATGCGACCCTCCCAGACCGGCCGCTCTCC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGTCGTCCTTGTTCTTCTaGGGTCCCGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGSSLFF*GPGFCS
Trigger: AGAGCAGAAGCCGGGACCCCAGAAGAACAAGGACGA...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254695.13
CDS-3UTR CCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGTCGATGCTGGGGTATaGGATATAGTCGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGVDAGV*DIVVLV
Trigger: AACAAGGACGACTATATCCCATACCCCAGCATCGAC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCAACCTCGTCGATGCTaGGGTATGGGATATAGTCGT +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQQPRRC*GMGYSR
Trigger: ACGACTATATCCCATACCCCAGCATCGACGAGGTTG...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGATAGCCCCCAAACTGTaGCAGGATGACCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQIAPKL*QDDLRV
Trigger: TACCCTCAGGTCATCCTGCCACAGTTTGGGGGCTAT...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGTCTCCGTCGGTAAATaGCAGCTTTGTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQVSVGK*QLCGNV
Trigger: CACGTTTCCACAAAGCTGCCATTTACCGACGGAGAC...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGTCTCCGTCGGTAAATaGCAGCTTTGTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVVSVGK*QLCGNV
Trigger: CACGTTTCCACAAAGCTGCCATTTACCGACGGAGAC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGGCGTGTTTTCCTCTTaGAAGATGATGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVGVFSS*KMMATM
Trigger: CATCGTGGCCATCATCTTCCAAGAGGAAAACACGCC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGGAGGCTATCATGTCTaGGACAAACGGCGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSGGYHV*DKRRVF
Trigger: GAAAACACGCCGTTTGTCCCAGACATGATAGCCTCC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCAGAGACCTTGTAGGATaGGGTCTCTGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPRDLVG*GLCAWG
Trigger: ACCCCAGGCACAGAGACCCCATCCTACAAGGTCTCT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGCCACCATGGTCTCCATaGAGTGGCTGCGTACGCGGA +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVPPWSP*SGCVRG
Trigger: TCCGCGTACGCAGCCACTCCATGGAGACCATGGTGG...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAATGGGACTCCGTGACTaGTTCTTCACCGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRMGLRD*FFTVAA
Trigger: GGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCAT...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGATGGGACTCCGTGACTaGTTCTTCACCGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVMGLRD*FFTVAA
Trigger: GGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCAT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCATGGGACTCCGTGACTaGTTCTTCACCGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFMGLRD*FFTVAA
Trigger: GGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCAT...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGTCTTGGGTGTGCTaGATGTGCTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTGSWVC*MCCHIV
Trigger: CACGATGTGACAGCACATCCAGCACACCCAAGACCC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCCCGGAGAGCTGGGATTaGATGAGGTCTCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSPESWD*MRSQTL
Trigger: TAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGG...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGAGATTTCCGGAGAGCTaGGATTGGATGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLRFPES*DWMRSQ
Trigger: CTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCT...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCAGGGCTTCTCCTTGTTaGGGCAGATTTCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTRASPC*GRFPES
Trigger: GCTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCT...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCCTCACCAGCATCCTTGACTGCTCACCTCCATGCCAGTGCCAAAGCAGCAGCGCACCAGAGCTGGCATaGCTGAGCTTGTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: SLTSILDCSPPCQCQSSSAPELA*LSLSKR
Trigger: CCGCTTTGACAAGCTCAGCCATGCCAGCTCTGGTGC...GCTGCTGCTTTGGCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGCACCAGAGCTGGCATaGCTGAGCTTGTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEAPELA*LSLSKR
Trigger: CCGCTTTGACAAGCTCAGCCATGCCAGCTCTGGTGC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVTRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTGAAGGCACTGCCCTGTaGCCAAGACCCTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPEGTAL*PRPSPR
Trigger: CCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTC...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCGGATGCTACGAATCTTaGCTCCTGGGAACATGGGGC +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPGCYES*LLGTWG
Trigger: GCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCC...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCCCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIPLTVH*QQGQGS
Trigger: GCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGG...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYPLTVH*QQGQGS
Trigger: GCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGG...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPALSLN*LEPRSR
Trigger: CCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGC...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTCAGGAGAAACCGGGTaGGACCCAAAGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVSGETG*DPKSPP
Trigger: AGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCACAGCAAACCGGGCATaGAGACCCCATCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPTANRA*RPHLRS
Trigger: AGACCTGAGATGGGGTCTCCATGCCCGGTTTGCTGT...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCTCGTGGAGATCACAGTaGAAATGCCTCAAACACCAG +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLSWRSQ*KCLKHQ
Trigger: CTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGA...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGAGGGAGACATGGGATTaGGGTGTACAAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVRETWD*GVQGAG
Trigger: GCCAGCCCCTTGTACACCCCAATCCCATGTCTCCCT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGCCTGTGACGCCGGATaGCTCCTCCGGAACGCAGTA +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGACDAG*LLRNAV
Trigger: TACTGCGTTCCGGAGGAGCCATCCGGCGTCACAGGC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS-3UTR TCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCTGCTTCCTCGCACTTaGCGGACAGGATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVLLPRT*RTGSSS
Trigger: GGAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCACTTGATGGGACTCCGTaGCTGGTTCTTCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPALDGTP*LVLHRC
Trigger: GCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAG...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAACTTGATGGGACTCCGTaGCTGGTTCTTCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQELDGTP*LVLHRC
Trigger: GCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAG...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCCTTGATGGGACTCCGTaGCTGGTTCTTCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFLDGTP*LVLHRC
Trigger: GCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAG...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGCCCCGAGCGTCGCTTaGTGGGACTCCGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYAPSVA*WDSVTG
Trigger: ACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCCAACAGCCAGCTGTGTaGCCTCAAGCAAGTTACTCC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTQQPAV*PQASYS
Trigger: GGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTTG...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCTTGTCACGGGAGCCTaGGTTTCTATTAACCACCTT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWLVTGA*VSINHL
Trigger: AAGGTGGTTAATAGAAACTCAGGCTCCCGTGACAAG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGCCCGCGGGGGTTTCTaGGGACGGTCACCCCACCTC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAARGGF*GRSPHL
Trigger: GAGGTGGGGTGACCGTCCTCAGAAACCCCCGCGGGC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS-3UTR GCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGAT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWLDLQT*QHGLVD
Trigger: ATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCCCTGGCTTCACCCTTaGACTCGAGCTTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVPWLHP*TRACSQ
Trigger: TTGGCTACAAGCTCGAGTGCAAGGGTGAAGCCAGGG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAAGTTCCCCAGGCTGCTaGCGGTACAGTAAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPSSPGC*RYSKSL
Trigger: TAAACTTTTACTGTACCGGCAGCAGCCTGGGGAACT...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTTCAAGTTCCCCAGGCTaGTGCCGGTACAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPASSSPG*CRYSKS
Trigger: ACTTTTACTGTACCGGCAGCAGCCTGGGGAACTTGA...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGAATCTCAGTCCCACTaGATCATCACAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGESQSH*IITESL
Trigger: AAGGCTTTCTGTGATGATGCAGTGGGACTGAGATTC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCCAAACTTGTCCGACTTaGAGCAGGCGTTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPQTCPT*SRRSRH
Trigger: ATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTG...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACTGTGCTGTCACATCGTaGCCGGCTGTCGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYCAVTS*PAVALA
Trigger: GGCCAGGGCGACAGCCGGGCACGATGTGACAGCACA...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGTGGGTGTGCTGGATGTaGTGTCACATCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGWVCWM*CHIVPG
Trigger: GCCGGGCACGATGTGACAGCACATCCAGCACACCCA...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPTALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAACCAGCATCCTTGACTaGTCACCTCCATGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQETSILD*SPPCQC
Trigger: GCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGT...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCGGAACCGCCCTTCCTaGACGTACCAGCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQRNRPS*TYQRTS
Trigger: GCTGGTGCGCTGGTACGTGCAGGAAGGGCGGTTCCG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637138.1
CDS-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAGGAGAGCGGCCGGTCTaGGAGGGTCGCATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKGERPV*EGRIRA
Trigger: AGCTCGGATGCGACCCTCCCAGACCGGCCGCTCTCC...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGTCGTCCTTGTTCTTCTaGGGTCCCGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVSSLFF*GPGFCS
Trigger: AGAGCAGAAGCCGGGACCCCAGAAGAACAAGGACGA...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGTCGATGCTGGGGTATaGGATATAGTCGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPVDAGV*DIVVLV
Trigger: AACAAGGACGACTATATCCCATACCCCAGCATCGAC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGCTCCCCAGCGATGTTaGGGTGCCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEAPQRC*GAHVLR
Trigger: CCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTATGGTCTCCATGGAGTaGCTGCGTACGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPMVSME*LRTRMA
Trigger: GGCCATCCGCGTACGCAGCCACTCCATGGAGACCAT...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCATGGTCTCCATaGAGTGGCTGCGTACGCGGA +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPPPWSP*SGCVRG
Trigger: TCCGCGTACGCAGCCACTCCATGGAGACCATGGTGG...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCCACCATGGTCTCCATaGAGTGGCTGCGTACGCGGA +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGPPWSP*SGCVRG
Trigger: TCCGCGTACGCAGCCACTCCATGGAGACCATGGTGG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCTGTGCGACTTCTTCTaGCCGCCCACCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGLCDFF*PPTMVS
Trigger: GGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCTGTGCGACTTCTTCTaGCCGCCCACCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPLCDFF*PPTMVS
Trigger: GGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAG...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCACCTCCATGCTGTTGTaGGAGATGCCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRTSMLL*EMPPLR
Trigger: CCTCAGCGGGGGCATCTCCCACAACAGCATGGAGGT...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCAGGGTCTTGGGTGTGCTaGATGTGCTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPAGSWVC*MCCHIV
Trigger: CACGATGTGACAGCACATCCAGCACACCCAAGACCC...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCCACCATCTGGGGTCTTaGGTGTGCTGGATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFHHLGS*VCWMCC
Trigger: ACAGCACATCCAGCACACCCAAGACCCCAGATGGTG...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAAGGGCTTCTCCTTGTTaGGGCAGATTTCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRRASPC*GRFPES
Trigger: GCTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCT...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGAGGTCGTGGACGGCTaGCTGCCCCCACTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTEVVDG*LPPLSP
Trigger: GGGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGGGAGTTTCTGCTTTTaGCATCTGTGGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVGSFCF*HLWDSG
Trigger: GCCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGTRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCGCTCACGGTACACTaGCAGCAGGGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELPLTVH*QQGQGS
Trigger: GCTGCCCTGCCCCTGCTGCCAGTGTACCGTGAGCGG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCATTCCTTCTCACTCCTaGCTTCCCACCCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTIPSHS*LPTPLW
Trigger: CCACAAAGGGGTGGGAAGCCAGGAGTGAGAAGGAAT...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGCTACAGACCCGCAGCTaGAGAGGGGAACAGGATTGG +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVLQTRS*RGEQDW
Trigger: CCAATCCTGTTCCCCTCTCCAGCTGCGGGTCTGTAG...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCACAGGCTCGTTGTACCTaGAGGATGCCCACCTTAACC +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPAQARCT*RMPTLT
Trigger: GGTTAAGGTGGGCATCCTCCAGGTACAACGAGCCTG...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCGGAAATCCTTGTCATTaGTCGTGGGGCAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVGNPCH*SWGRCP
Trigger: TGGGCACCTGCCCCACGACCAATGACAAGGATTTCC...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATCCACCAAGCACCTGTAATGCCGGCTTCCCACAGAGGCGAGCCAGATCCTGCAACAGCAAACCGGGCATaGAGACCCCATCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IHQAPVMPASHRGEPDPATANRA*RPHLRS
Trigger: AGACCTGAGATGGGGTCTCCATGCCCGGTTTGCTGT...TGCAGGATCTGGCTCGCCTCTGTGGGAAGCCGGCATTACAGGTGCTTGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGAGGGAAGAGGCATTTaGGGTCCTGTTCAGATCATT +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPEGRGI*GPVQII
Trigger: AATGATCTGAACAGGACCCCAAATGCCTCTTCCCTC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGAGGGAAGAGGCATTTaGGGTCCTGTTCAGATCATT +
Preference number: 4 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSEGRGI*GPVQII
Trigger: AATGATCTGAACAGGACCCCAAATGCCTCTTCCCTC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGACTGCCCGGGTGGGCTaGAAGTGCACACTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGTARVG*KCTLWK
Trigger: CTTCCAGAGTGTGCACTTCCAGCCCACCCGGGCAGT...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTGAAAACATCCCCTCGTaGAGATCACAGTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSENIPS*RSQWKC
Trigger: GCATTTCCACTGTGATCTCCACGAGGGGATGTTTTC...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAAGCGTCAACTGAGCTaGAGGCATATGGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPKRQLS*RHMGDP
Trigger: AGGGTCACCCATATGCCTCCAGCTCAGTTGACGCTT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCAGAGGAAGGGACCCTaGGTTGAGGGTTCTAATCCC +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVQRKGP*VEGSNP
Trigger: GGGATTAGAACCCTCAACCCAGGGTCCCTTCCTCTG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCTTGGCAAACTTTACTaGCCTCCCCTTGCCTCGATA +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPALGKLY*PPLASI
Trigger: TATCGAGGCAAGGGGAGGCCAGTAAAGTTTGCCAAG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGTGTGGCAGGATGACCTaGGGGTACGGGCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQCGRMT*GYGPPF
Trigger: GAAGGGAGGCCCGTACCCTCAGGTCATCCTGCCACA...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTGTGGCAGGATGACCTaGGGGTACGGGCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQCGRMT*GYGPPF
Trigger: GAAGGGAGGCCCGTACCCTCAGGTCATCCTGCCACA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAAAGCCTTTGCAATCTaGGGGACACTGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPKAFAI*GTLGSL
Trigger: CAAGCTTCCCAGTGTCCCTCAGATTGCAAAGGCTTT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAATGTTGTGTACACTaGTTCCACCCCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTECCVH*FHPCLS
Trigger: GGACAGACAGGGGTGGAATCAGTGTACACAACATTC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTATTTCCTTCAACTTCATaGAGGGCTTCTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVFPSTS*RASPCW
Trigger: CCAACAAGGAGAAGCCCTTCATGAAGTTGAAGGAAA...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGCTCCTGCTTGAAGGGTaGGGTCGTGGACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQLLLEG*GRGRLA
Trigger: AGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAG...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCCTCCTGCTTGAAGGGTaGGGTCGTGGACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRILLLEG*GRGRLA
Trigger: AGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAG...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGCAGAGCTGGCATGGCTaGGCTTGTCAAAGCGGAATT +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRQSWHG*ACQSGI
Trigger: AATTCCGCTTTGACAAGCTCAGCCATGCCAGCTCTG...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCCAACAGCCAGCTGTGTaGCCTCAAGCAAGTTACTCC +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFQQPAV*PQASYS
Trigger: GGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTTG...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCTTGTCACGGGAGCCTaGGTTTCTATTAACCACCTT +
Preference number: 4 (lower is better)
Translates to: KVPASVQEVCSAVLARPALVTGA*VSINHL
Trigger: AAGGTGGTTAATAGAAACTCAGGCTCCCGTGACAAG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCCAGCGATGTTGGGGTaGCCACGTTCTCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQPAMLG*PRSPGP
Trigger: AGGACCCGGAGAACGTGGGCACCCCAACATCGCTGG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCCAGCGATGTTGGGGTaGCCACGTTCTCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEPAMLG*PRSPGP
Trigger: AGGACCCGGAGAACGTGGGCACCCCAACATCGCTGG...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGAGTTCCCCAGGCTGCTaGCGGTACAGTAAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQSSPGC*RYSKSL
Trigger: TAAACTTTTACTGTACCGGCAGCAGCCTGGGGAACT...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGGACACTGGGAAGCTTaGTCAGTCCAGCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGGHWEA*SVQPRG
Trigger: TCCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGAATCTCAGTCCCACTaGATCATCACAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PKVPASVQEVCSAVLARPESQSH*IITESL
Trigger: AAGGCTTTCTGTGATGATGCAGTGGGACTGAGATTC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCCTCTTTCTCTGGAGCTaGTGGGCGTCTCCGTCGGTA +
Preference number: 4 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRLFLWS*WASPSV
Trigger: TACCGACGGAGACGCCCAGCAGCTCCAGAGAAAGAG...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGCCGGTCCTCCAGCTTTaGAAACTTGTCCGACTTGCA +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRPVLQL*KLVRLA
Trigger: TGCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGG...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAACCGGTCCTCCAGCTTTaGAAACTTGTCCGACTTGCA +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEPVLQL*KLVRLA
Trigger: TGCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGG...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGGGGATGCCCCCACTGTaGGACTTCTTCTGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQGMPPL*DFFWPP
Trigger: GGGCGGCCAGAAGAAGTCGCACAGTGGGGGCATCCC...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTATGTGCTGTCACATCGTaGCCGGCTGTCGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELCAVTS*PAVALA
Trigger: GGCCAGGGCGACAGCCGGGCACGATGTGACAGCACA...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATCTCGGGGAGTTTCTaGTTTTGGCATCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPISGSF*FWHLWD
Trigger: GTCCCACAGATGCCAAAAGCAGAAACTCCCCGAGAT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVTALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCCCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAACCTGGTAGTAAAGCCTaGCACGTTCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEPGSKA*HVQEGT
Trigger: AGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGASTTE*VPGSKA
Trigger: GGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGTCAAAGGGAAGAGACTaGCTCGGGGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQSKGRD*LGAAPP
Trigger: GGGAGGGGCAGCCCCGAGGCAGTCTCTTCCCTTTGA...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGTCAAAGGGAAGAGACTaGCTCGGGGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPESKGRD*LGAAPP
Trigger: GGGAGGGGCAGCCCCGAGGCAGTCTCTTCCCTTTGA...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGAGAAGCCCACGGCGCTaGAGACTCGGAAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPERSPRR*RLGRGR
Trigger: TCTCCCCCTTCCGAGTCTGCAGCGCCGTGGGCTTCT...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGAAAAAGAGCAGAAACTaGAGCCTCACCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWKKSRN*SLTSIL
Trigger: AAGGATGCTGGTGAGGCTGCAGTTTCTGCTCTTTTT...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTACTCGAACCCCCAACTaGTTAAAACAGATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSTRTPN*LKQICL
Trigger: GAGACAGATCTGTTTTAAGCAGTTGGGGGTTCGAGT...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGGGCCAAACATGGTTGTaGCTGCAGAGCCCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQGQTWL*LQSPGS
Trigger: GGACCCCGGGCTCTGCAGCCACAACCATGTTTGGCC...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTCAGACTTGCCAGCATaGTCTTGTCGATCCATCCGA +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPSDLPA*SCRSIR
Trigger: TCGGATGGATCGACAAGACCATGCTGGCAAGTCTGA...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGGAGAGCGGCCGGTCTaGGAGGGTCGCATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITGERPV*EGRIRA
Trigger: AGCTCGGATGCGACCCTCCCAGACCGGCCGCTCTCC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGCAACCTCGTCGATGCTaGGGTATGGGATATAGTCGT +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGQPRRC*GMGYSR
Trigger: ACGACTATATCCCATACCCCAGCATCGACGAGGTTG...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCCAACCTCGTCGATGCTaGGGTATGGGATATAGTCGT +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPQPRRC*GMGYSR
Trigger: ACGACTATATCCCATACCCCAGCATCGACGAGGTTG...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGATAGCCCCCAAACTGTaGCAGGATGACCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRIAPKL*QDDLRV
Trigger: TACCCTCAGGTCATCCTGCCACAGTTTGGGGGCTAT...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCGCCTCCGGTAGGCCCTaGCTTCACCCTTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSASGRP*LHPCTR
Trigger: TCGAGTGCAAGGGTGAAGCCAGGGCCTACCGGAGGC...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCGGAGGCTATCATGTCTaGGACAAACGGCGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: PGSKACHVQEGTALWPRPGGYHV*DKRRVF
Trigger: GAAAACACGCCGTTTGTCCCAGACATGATAGCCTCC...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGAGGCTATCATGTCTaGGACAAACGGCGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPGGYHV*DKRRVF
Trigger: GAAAACACGCCGTTTGTCCCAGACATGATAGCCTCC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCAGGCATGTAAGAAATTaGAGGCTATCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLRHVRN*RLSCLG
Trigger: TCCCAGACATGATAGCCTCCAATTTCTTACATGCCT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTGGGGTCTCTGTGCCTaGGGTCTCGACCTGCACGAC +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQWGLCA*GLDLHD
Trigger: GTCGTGCAGGTCGAGACCCCAGGCACAGAGACCCCA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGCCCGGCTGTCGCCCTaGCCTTCTGAGCCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHARLSP*PSEPVC
Trigger: GCACACGGGCTCAGAAGGCCAGGGCGACAGCCGGGC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTGGAGTGTCCACCATCTaGGGTCTTGGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPGVSTI*GLGCAG
Trigger: TCCAGCACACCCAAGACCCCAGATGGTGGACACTCC...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGGAGTGTCCACCATCTaGGGTCTTGGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGGVSTI*GLGCAG
Trigger: TCCAGCACACCCAAGACCCCAGATGGTGGACACTCC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCAGATTTCCGGAGAGCTaGGATTGGATGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTRFPES*DWMRSQ
Trigger: CTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCT...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGAGGAGGAGCGGGAGATaGCACGGCCGTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGRRSGR*HGRFPS
Trigger: TGAAGGAAAACGGCCGTGCCATCTCCCGCTCCTCCT...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGCGGAGGCAGGGCTGTaGCCAGACTGGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDAEAGL*PDWDTW
Trigger: CCAGGTGTCCCAGTCTGGCCACAGCCCTGCCTCCGC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTGGCTCCTGGGAACATaGGGCCTCCACCACCGAGTG +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIWLLGT*GLHHRV
Trigger: CACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCA...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTGGCTCCTGGGAACATaGGGCCTCCACCACCGAGTG +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQWLLGT*GLHHRV
Trigger: CACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPTNLGS*EHGAST
Trigger: GGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGT...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCCGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 4 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLRILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQALSLN*LEPRSR
Trigger: CCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGTCGTGGAGATCACAGTaGAAATGCCTCAAACACCAG +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQSWRSQ*KCLKHQ
Trigger: CTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGA...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCCAGCTCCTGCTTCTTaGCCTTCAGACTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGPAPAS*PSDLPA
Trigger: TGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCTGCTTCCTCGCACTTaGCGGACAGGATCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGLLPRT*RTGSSS
Trigger: GGAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGGTACAGGACAGGATTaGATCTCAGTCCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEGTGQD*ISVPLH
Trigger: ATGCAGTGGGACTGAGATTCAATCCTGTCCTGTACC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCATCTTCCCGCGCAGTaGCAGAGACCTTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGHLPAQ*QRPCRM
Trigger: CATCCTACAAGGTCTCTGTCACTGCGCGGGAAGATG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGCGTGGAGCTCATCGTaGAGGTTGTCCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIAWSSS*RLSRRA
Trigger: TGCCCTCCTGGACAACCTTCACGATGAGCTCCACGC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGAGAAGGTGGTCTTGGTaGCCTCCATGCTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGRRWSW*PPCCCG
Trigger: CCCACAACAGCATGGAGGTCACCAAGACCACCTTCT...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACTCCTGCTTGAAGGGTaGGGTCGTGGACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELLLLEG*GRGRLA
Trigger: AGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAACCAGCAGGCTTGTGTTaGGATGATGCTGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEPAGLC*DDADKA
Trigger: AGCTTTGTCAGCATCATCTCAACACAAGCCTGCTGG...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGAGCCGAGGGGTCCTaGGCATGGCTGACTGGCCTG +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHGAEGS*AWLTGL
Trigger: CAGGCCAGTCAGCCATGCTCAGGACCCCTCGGCTCC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCAAACATGGTTGTGGCTaGAGAGCCCGGGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIKHGCG*RARGPS
Trigger: GCTGGGACCCCGGGCTCTGCAGCCACAACCATGTTT...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR GCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGAT +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPLDLQT*QHGLVD
Trigger: ATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAG...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGAT +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTLDLQT*QHGLVD
Trigger: ATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAG...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGACCACAACCTCGTCGATaGTGGGGTATGGGATATAGT +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRPQPRR*WGMGYS
Trigger: ACTATATCCCATACCCCAGCATCGACGAGGTTGTGG...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCCACAACCTCGTCGATaGTGGGGTATGGGATATAGT +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVPQPRR*WGMGYS
Trigger: ACTATATCCCATACCCCAGCATCGACGAGGTTGTGG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCCCTCCTCACAGATGCTaGTCCCCAGCGATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIPPHRC*SPAMLG
Trigger: CCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGG...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCAGTTCCCCAGGCTGCTaGCGGTACAGTAAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPSSPGC*RYSKSL
Trigger: TAAACTTTTACTGTACCGGCAGCAGCCTGGGGAACT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATCAAGTTCCCCAGGCTaGTGCCGGTACAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRSSSPG*CRYSKS
Trigger: ACTTTTACTGTACCGGCAGCAGCCTGGGGAACTTGA...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCTCAAGTTCCCCAGGCTaGTGCCGGTACAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVSSSPG*CRYSKS
Trigger: ACTTTTACTGTACCGGCAGCAGCCTGGGGAACTTGA...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGTACTCGATCCCCTCTaGTTCCTCGCACTTGACGGA +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGVLDPL*FLALDG
Trigger: TCCGTCAAGTGCGAGGAAGCAGAGGGGATCGAGTAC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCATCACAGAAAGCCTTTaGAATCTGAGGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTITESL*NLRDTG
Trigger: CCCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGAT...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTCTCCATGGAGTGGCTaGGTACGCGGATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQSPWSG*VRGWPS
Trigger: AGAGGGCCATCCGCGTACGCAGCCACTCCATGGAGA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTCTGGTTCTTCACCGTTaGCGCCACCACTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKILVLHR*RHHWRR
Trigger: TCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAG...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCTGGTTCTTCACCGTTaGCGCCACCACTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQLVLHR*RHHWRR
Trigger: TCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTGGGTGTGCTGGATGTaGTGTCACATCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQWVCWM*CHIVPG
Trigger: GCCGGGCACGATGTGACAGCACATCCAGCACACCCA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGTGGGTGTGCTGGATGTaGTGTCACATCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEWVCWM*CHIVPG
Trigger: GCCGGGCACGATGTGACAGCACATCCAGCACACCCA...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGAGCTCCTCTCCAGCTTaGAAACAGGACTCAATCATT +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQSSSPA*KQDSII
Trigger: AATGATTGAGTCCTGTTTGCAAGCTGGAGAGGAGCT...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGATCACAGTGGAAATaGCTCAAACACCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPRSQWK*LKHQRE
Trigger: CTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAGGCCAAACATGGTTGTaGCTGCAGAGCCCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKGQTWL*LQSPGS
Trigger: GGACCCCGGGCTCTGCAGCCACAACCATGTTTGGCC...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCGCTTCCGGCCAAACATaGTTGTGGCTGCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIASGQT*LWLQSP
Trigger: CGGGCTCTGCAGCCACAACCATGTTTGGCCGGAAGC...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGTCGTCCTTGTTCTTCTaGGGTCCCGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGSSLFF*GPGFCS
Trigger: AGAGCAGAAGCCGGGACCCCAGAAGAACAAGGACGA...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAGCCTCCGGTAGGCCCTaGCTTCACCCTTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELASGRP*LHPCTR
Trigger: TCGAGTGCAAGGGTGAAGCCAGGGCCTACCGGAGGC...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTATGTGTCTCTTTCTCTaGAGCTGCTGGGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPMCLFL*SCWASP
Trigger: CGGAGACGCCCAGCAGCTCCAGAGAAAGAGACACAT...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCGGCGTGTTTTCCTCTTaGAAGATGATGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFGVFSS*KMMATM
Trigger: CATCGTGGCCATCATCTTCCAAGAGGAAAACACGCC...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCGAGGTGGACCAAAGGTaGGCACATCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIEVDQR*AHLPAQ
Trigger: CTGCGCGGGAAGATGTGCCCACCTTTGGTCCACCTC...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGAGGTGGACCAAAGGTaGGCACATCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIEVDQR*AHLPAQ
Trigger: CTGCGCGGGAAGATGTGCCCACCTTTGGTCCACCTC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGGGACTGGGCAGAGGTaGACCAAAGGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQGTGQR*TKGGHI
Trigger: GATGTGCCCACCTTTGGTCCACCTCTGCCCAGTCCC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCTGTGCGACTTCTTCTaGCCGCCCACCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYLCDFF*PPTMVS
Trigger: GGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAG...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCCGTTGCCGCCACCACTaGAGGCGAGAAGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIRCRHH*RREGGL
Trigger: AAGACCACCTTCTCGCCTCCAGTGGTGGCGGCAACG...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGCCGGAGAGCTGGGATTaGATGAGGTCTCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: GEHPKQERAARMLRSRKRPESWD*MRSQTL
Trigger: TAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGG...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCAGATTTCCGGAGAGCTaGGATTGGATGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFRFPES*DWMRSQ
Trigger: CTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCT...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGGGAGTTTCTGCTTTTaGCATCTGTGGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGGSFCF*HLWDSG
Trigger: GCCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGGACTGTCAGGGTCGTaGACGGCACTCCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIGLSGS*TALPNC
Trigger: GCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPETRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGTGGCTCCTGGGAACATaGGGCCTCCACCACCGAGTG +
Preference number: 4 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQWLLGT*GLHHRV
Trigger: CACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCA...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTATGGCTCCTGGGAACATaGGGCCTCCACCACCGAGTG +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELWLLGT*GLHHRV
Trigger: CACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCA...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 4 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVRILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMALSLN*LEPRSR
Trigger: CCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGC...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTATGGGATTCCCAAATaGGACAGCATGGTGACAACC +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPYGIPK*DSMVTT
Trigger: GGTTGTCACCATGCTGTCCCATTTGGGAATCCCATA...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGACTGCCCGGGTGGGCTaGAAGTGCACACTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPETARVG*KCTLWK
Trigger: CTTCCAGAGTGTGCACTTCCAGCCCACCCGGGCAGT...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAAAACATCCCCTCGTaGAGATCACAGTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: GLKDATNLGSWEHGASTTENIPS*RSQWKC
Trigger: GCATTTCCACTGTGATCTCCACGAGGGGATGTTTTC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGAAGCGTCAACTGAGCTaGAGGCATATGGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVKRQLS*RHMGDP
Trigger: AGGGTCACCCATATGCCTCCAGCTCAGTTGACGCTT...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCAGCAGTCCCCGAGCTaGAGTGTCCAAGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQQQSPS*SVQGEH
Trigger: GTGTTCCCCTTGGACACTCCAGCTCGGGGACTGCTG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCCAGCAGTCCCCGAGCTaGAGTGTCCAAGGGGAACAC +
Preference number: 4 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSQQSPS*SVQGEH
Trigger: GTGTTCCCCTTGGACACTCCAGCTCGGGGACTGCTG...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGCATTACATAGGCAGTTaGGATCTACGAATCACCTCC +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQHYIGS*DLRITS
Trigger: GGAGGTGATTCGTAGATCCCAACTGCCTATGTAATG...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCACACACCCTATAGGTaGACGTGTGTGCAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQHTPYR*TCVQRP
Trigger: GGGGCGCTGCACACACGTCCACCTATAGGGTGTGTG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS-3UTR TCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACAAACTGTGGCAGGATaGCCTGAGGGTACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELQTVAG*PEGTGL
Trigger: GAGGCCCGTACCCTCAGGTCATCCTGCCACAGTTTG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGGCGTGGAGCTCATCGTaGAGGTTGTCCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQAWSSS*RLSRRA
Trigger: TGCCCTCCTGGACAACCTTCACGATGAGCTCCACGC...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTTTCCTTCAACTTCATaGAGGGCTTCTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PPSAFLVVKPATFRKALPFPSTS*RASPCW
Trigger: CCAACAAGGAGAAGCCCTTCATGAAGTTGAAGGAAA...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACACTCCTGCTTGAAGGGTaGGGTCGTGGACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTLLLEG*GRGRLA
Trigger: AGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAG...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTCAAACACCTCCTGCTTaGAGGGTGAGGTCGTGGACG +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIQTPPA*RVRSWT
Trigger: CGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTG...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCAAACACCTCCTGCTTaGAGGGTGAGGTCGTGGACG +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQQTPPA*RVRSWT
Trigger: CGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCAAACACCTCCTGCTTaGAGGGTGAGGTCGTGGACG +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYQTPPA*RVRSWT
Trigger: CGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTG...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCTCCTTTGCTCTCCCTaGATTCCTTCTCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPLLCSP*IPSHSW
Trigger: CCAGGAGTGAGAAGGAATTCAGGGAGAGCAAAGGAG...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGAT +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFLDLQT*QHGLVD
Trigger: ATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAG...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCCTCCTCCTCACAGATaGTGCTCCCCAGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEPPPHR*CSPAML
Trigger: CAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGG...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCCCTCCTCCTCACAGATaGTGCTCCCCAGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIPPPHR*CSPAML
Trigger: CAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGG...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGGACACTGGGAAGCTTaGTCAGTCCAGCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQGHWEA*SVQPRG
Trigger: TCCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAAAACCTTTGAAATCCTaGAGTGTGATCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRKPLKS*SVIVSP
Trigger: GGGGGACACGATCACACTGCAGGATTTCAAAGGTTT...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCCTCTTTCTCTGGAGCTaGTGGGCGTCTCCGTCGGTA +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRILFLWS*WASPSV
Trigger: TACCGACGGAGACGCCCAGCAGCTCCAGAGAAAGAG...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACTGGTTCTTCACCGTTaGCGCCACCACTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELLVLHR*RHHWRR
Trigger: TCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIASTTE*VPGSKA
Trigger: GGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACAACCATGTAGGCGCTaGAGAGGAAGGGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELQPCRR*RGRDPG
Trigger: CCCAGGGTCCCTTCCTCTGCAGCGCCTACATGGTTG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGAAAAAGAGCAGAAACTaGAGCCTCACCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGKKSRN*SLTSIL
Trigger: AAGGATGCTGGTGAGGCTGCAGTTTCTGCTCTTTTT...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAGATCCTGACAGGGGCTaGACACCTCACGCACGCACA +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELDPDRG*TPHART
Trigger: TGTGCGTGCGTGAGGTGTGCAGCCCCTGTCAGGATC...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGCTCCCCAGCGATGTTaGGGTGCCCACGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHAPQRC*GAHVLR
Trigger: CCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGCCTCCGGTAGGCCCTaGCTTCACCCTTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITASGRP*LHPCTR
Trigger: TCGAGTGCAAGGGTGAAGCCAGGGCCTACCGGAGGC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGAACTCCTTAAAAGCTaGGCTCTCCTCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEELLKS*ALLIVP
Trigger: GGGAACAATGAGGAGAGCCCAGCTTTTAAGGAGTTC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGTTTCTCTGGAGCTGCTaGGCGTCTCCGTCGGTAAAT +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGFLWSC*ASPSVN
Trigger: ATTTACCGACGGAGACGCCCAGCAGCTCCAGAGAAA...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTTTTCTCTGGAGCTGCTaGGCGTCTCCGTCGGTAAAT +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPFLWSC*ASPSVN
Trigger: ATTTACCGACGGAGACGCCCAGCAGCTCCAGAGAAA...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGGGCGTGTTTTCCTCTTaGAAGATGATGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVGVFSS*KMMATM
Trigger: CATCGTGGCCATCATCTTCCAAGAGGAAAACACGCC...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGGGAGGCTATCATGTCTaGGACAAACGGCGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVGGYHV*DKRRVF
Trigger: GAAAACACGCCGTTTGTCCCAGACATGATAGCCTCC...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTTGGGGTCTCTGTGCCTaGGGTCTCGACCTGCACGAC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAWGLCA*GLDLHD
Trigger: GTCGTGCAGGTCGAGACCCCAGGCACAGAGACCCCA...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGTCTCTGTGCCTaGGGTCTCGACCTGCACGAC +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTWGLCA*GLDLHD
Trigger: GTCGTGCAGGTCGAGACCCCAGGCACAGAGACCCCA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCATGGGACTCCGTGACTaGTTCTTCACCGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIMGLRD*FFTVAA
Trigger: GGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCAT...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGCACCAGAGCTGGCATaGCTGAGCTTGTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEAPELA*LSLSKR
Trigger: CCGCTTTGACAAGCTCAGCCATGCCAGCTCTGGTGC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGGGCTGTGGCCAGACTaGGACACCTGGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDGLWPD*DTWTNS
Trigger: GCTGTTGGTCCAGGTGTCCCAGTCTGGCCACAGCCC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGCCTCGTCCAGAGATaGGAGGGGCTGGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHGLVQR*EGLGGH
Trigger: ATGCCCTCCCAGCCCCTCCCATCTCTGGACGAGGCC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGCTCTGAGCTTGAACTaGCTGGAGCCCCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTALSLN*LEPRSR
Trigger: CCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTTGTGCAGCGCAGTTCTaGCCCGTCCAGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILACAAQF*PVQLWL
Trigger: GAGCCAGAGCTGGACGGGCCAGAACTGCGCTGCACA...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTATCAGGAGAAACCGGGTaGGACCCAAAGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELSGETG*DPKSPP
Trigger: AGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGA...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGTAGTATTTATATCTTaGGCACAGGTCCAGATCCCT +
Preference number: 4 (lower is better)
Translates to: SGSELELAGAPLTVHWQQVVFIS*AQVQIP
Trigger: AGGGATCTGGACCTGTGCCCAAGATATAAATACTAC...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGGTCAGCCAGCGCAGTaGGGACAGGCAGGTATGGGA +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDGQPAQ*GQAGMG
Trigger: TCCCATACCTGCCTGTCCCCACTGCGCTGGCTGACC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGGTCAGCCAGCGCAGTaGGGACAGGCAGGTATGGGA +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTGQPAQ*GQAGMG
Trigger: TCCCATACCTGCCTGTCCCCACTGCGCTGGCTGACC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGTTTGAGCCCCAAGACTaGGCGCAGCATAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVFEPQD*AQHKRK
Trigger: TTTCCTTTTATGCTGCGCCCAGTCTTGGGGCTCAAA...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCAAAGCAGCAGCTAACTaGCTTCCCCAAAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRKAAAN*LPQNPG
Trigger: CCCTGGGTTTTGGGGAAGCCAGTTAGCTGCTGCTTT...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAAAAGTCGTCGTCACATaGAGCATCACTTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEKVVVT*SITSKP
Trigger: TGGCTTGGAAGTGATGCTCCATGTGACGACGACTTT...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 72 bp GGAAGGGACCCTGGGTTGAGGGTTCTAATCCCAGCTTaGCCAACAGCCAGCTGTGTGACCTCAAGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GRDPGLRVLIPA*PTASCVTSSKL
Trigger: TAACTTGCTTGAGGTCACACAGCTGGCTGTTGGCAAAGCTGGGATTAGAACCCTCAACCCAGGGTCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCCCAGCTCCTGCTTCTTaGCCTTCAGACTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSPAPAS*PSDLPA
Trigger: TGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGG...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTCTGCTCTTCAAGCTTaGTCCCCTGCATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVSALQA*SPAFSP
Trigger: TGGAGAAAATGCAGGGGATCAAGCTTGAAGAGCAGA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGCTTGATGGGACTCCGTaGCTGGTTCTTCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQLDGTP*LVLHRC
Trigger: GCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAG...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAATTTCCTTCAACTTCATaGAGGGCTTCTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEFPSTS*RASPCW
Trigger: CCAACAAGGAGAAGCCCTTCATGAAGTTGAAGGAAA...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCGAAACCCTTCAGATGTaGCAGCTGCCTACAGACCCG +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIETLQM*QLPTDP
Trigger: CGGGTCTGTAGGCAGCTGTCACATCTGAAGGGTTTC...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGTTTGGGCAAATCTTTaGGCCCCAAGACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEVWANL*APRLGA
Trigger: TGCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAAC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGCCTCACCAGCATCCTTaGCTGCTCACCTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMPHQHP*LLTSMP
Trigger: TGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGG...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCTCAAGCTTGATCCCCTaGATTTTCTCCAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVSSLIP*IFSSIS
Trigger: TGAGATGCTGGAGAAAATGCAGGGGATCAAGCTTGA...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATCCAGCGATGTTGGGGTaGCCACGTTCTCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHPAMLG*PRSPGP
Trigger: AGGACCCGGAGAACGTGGGCACCCCAACATCGCTGG...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGGTACTCGATCCCCTCTaGTTCCTCGCACTTGACGGA +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQVLDPL*FLALDG
Trigger: TCCGTCAAGTGCGAGGAAGCAGAGGGGATCGAGTAC...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGATCACAGAAAGCCTTTaGAATCTGAGGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVITESL*NLRDTG
Trigger: CCCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGAT...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTAGGATGGGGTCTCTGTaGCTGGGGTCTCGACCTGCA +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILARMGSL*LGSRPA
Trigger: TGCAGGTCGAGACCCCAGGCACAGAGACCCCATCCT...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATAGAAGCCCACGGCGCTaGAGACTCGGAAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHRSPRR*RLGRGR
Trigger: TCTCCCCCTTCCGAGTCTGCAGCGCCGTGGGCTTCT...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAACTCTGCAGCCCCGTCTaGACTGAAAGGGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKLCSPV*TERGSS
Trigger: TGAAGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAG...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCAGCTCCTCTCCAGCTTaGAAACAGGACTCAATCATT +
Preference number: 4 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFSSSPA*KQDSII
Trigger: AATGATTGAGTCCTGTTTGCAAGCTGGAGAGGAGCT...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGAAAACAGGAGAGAGCTaGACGCATGCTAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGKTGES*THAKEQ
Trigger: CTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTT...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGCCACACAGGGGAATCTaGACATTCACACGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQPHRGI*TFTRQQ
Trigger: CTGCTGGCGTGTGAATGTGCAGATTCCCCTGTGTGG...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTCGTCCTTGTTCTTCTaGGGTCCCGGCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRISSLFF*GPGFCS
Trigger: AGAGCAGAAGCCGGGACCCCAGAAGAACAAGGACGA...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCAACCTCGTCGATGCTaGGGTATGGGATATAGTCGT +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPQPRRC*GMGYSR
Trigger: ACGACTATATCCCATACCCCAGCATCGACGAGGTTG...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGGAACTCCTTAAAAGCTaGGCTCTCCTCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVELLKS*ALLIVP
Trigger: GGGAACAATGAGGAGAGCCCAGCTTTTAAGGAGTTC...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCATGTGTCTCTTTCTCTaGAGCTGCTGGGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIMCLFL*SCWASP
Trigger: CGGAGACGCCCAGCAGCTCCAGAGAAAGAGACACAT...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGATGTGTCTCTTTCTCTaGAGCTGCTGGGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQMCLFL*SCWASP
Trigger: CGGAGACGCCCAGCAGCTCCAGAGAAAGAGACACAT...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGAGACCTTGTAGGATaGGGTCTCTGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQRDLVG*GLCAWG
Trigger: ACCCCAGGCACAGAGACCCCATCCTACAAGGTCTCT...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACATGGTCTCCATGGAGTaGCTGCGTACGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDMVSME*LRTRMA
Trigger: GGCCATCCGCGTACGCAGCCACTCCATGGAGACCAT...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACACCACCATGGTCTCCATaGAGTGGCTGCGTACGCGGA +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITPPWSP*SGCVRG
Trigger: TCCGCGTACGCAGCCACTCCATGGAGACCATGGTGG...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCTGTGCGACTTCTTCTaGCCGCCCACCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILALCDFF*PPTMVS
Trigger: GGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAG...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGTCTTGGGTGTGCTaGATGTGCTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYGSWVC*MCCHIV
Trigger: CACGATGTGACAGCACATCCAGCACACCCAAGACCC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTCACCATCTGGGGTCTTaGGTGTGCTGGATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIHHLGS*VCWMCC
Trigger: ACAGCACATCCAGCACACCCAAGACCCCAGATGGTG...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAGGAGTGTCCACCATCTaGGGTCTTGGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELGVSTI*GLGCAG
Trigger: TCCAGCACACCCAAGACCCCAGATGGTGGACACTCC...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGGGGAGTTTCTGCTTTTaGCATCTGTGGGACTCCGGC +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQGSFCF*HLWDSG
Trigger: GCCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCC...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCCAGACTGGGACACCTaGACCAACAGCACATCTGTG +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYPDWDT*TNSTSV
Trigger: CACAGATGTGCTGTTGGTCCAGGTGTCCCAGTCTGG...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAACCCGGACATCACACTaGGAGGTCAGGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTTRTSH*EVRSRR
Trigger: CCTCCTGCTCCTGACCTCCCAGTGTGATGTCCGGGT...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAACGAATCTTGGCTCCTaGGAACATGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKTNLGS*EHGAST
Trigger: GGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGT...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGGATGCTACGAATCTTaGCTCCTGGGAACATGGGGC +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQGCYES*LLGTWG
Trigger: GCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGCCTACGTCAGCAGATaGGAAAGGCGTTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYAYVSR*ERRSAQ
Trigger: CTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGCCTACGTCAGCAGATaGGAAAGGCGTTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQAYVSR*ERRSAQ
Trigger: CTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACCCTTGTCATTGGTCGTaGGGCAGGTGCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDPCHWS*GRCPAS
Trigger: ACTGGCTGGGCACCTGCCCCACGACCAATGACAAGG...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGCCAAAGGACCCCAGATaGCAATGTGACACGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQPKDPR*QCDTAH
Trigger: ATGGGCCGTGTCACATTGCCATCTGGGGTCCTTTGG...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTTCAGACTTGCCAGCATaGTCTTGTCGATCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPSDLPA*SCRSSD
Trigger: GTCAGAGGATCGACAAGACCATGCTGGCAAGTCTGA...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540393.6
3UTR CAA 72 bp AATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGGCCTCCACCACCGAGT +
Preference number: 4 (lower is better)
Translates to: NFIRMASRMLRI*APGNMGPPPPS
Trigger: ACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
3UTR CAA 72 bp GATCCCTATGGGAATAAAGCATTCAGCTGGAAATCCTaGTCATTGGTCGTGGGGCAGGTGCCCAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: DPYGNKAFSWKS*SLVVGQVPSQC
Trigger: ACACTGGCTGGGCACCTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 72 bp GTCAGGGAGGAAAGCGAAACAGGCTCTTGTCCTGCCTaGTCACGGGAGCCTGAGTTTCTATTAACCACCTTC +
Preference number: 4 (lower is better)
Translates to: VREESETGSCPA*SREPEFLLTTF
Trigger: GAAGGTGGTTAATAGAAACTCAGGCTCCCGTGACAAGGCAGGACAAGAGCCTGTTTCGCTTTCCTCCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAACCAGCTCCTGCTTCTTaGCCTTCAGACTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKPAPAS*PSDLPA
Trigger: TGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGG...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCAAATGTGTTGGGGCTaGGGTTGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEQMCWG*GCPLPP
Trigger: AGGAGGAAGAGGACAACCTCAGCCCCAACACATTTG...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCAAATGTGTTGGGGCTaGGGTTGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYQMCWG*GCPLPP
Trigger: AGGAGGAAGAGGACAACCTCAGCCCCAACACATTTG...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTTTCCTTCAACTTCATaGAGGGCTTCTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVFPSTS*RASPCW
Trigger: CCAACAAGGAGAAGCCCTTCATGAAGTTGAAGGAAA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGCAGAGCTGGCATGGCTaGGCTTGTCAAAGCGGAATT +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQQSWHG*ACQSGI
Trigger: AATTCCGCTTTGACAAGCTCAGCCATGCCAGCTCTG...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGGAGAAAGGTAGTGTTTaGGTTGGCACCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQEKGSV*VGTWQG
Trigger: ACCCTGCCAGGTGCCAACTCAAACACTACCTTTCTC...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTCTCTCGCCAGATCCTaGCAGGGGCTGCACACCTCA +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHSLARS*QGLHTS
Trigger: TGAGGTGTGCAGCCCCTGTCAGGATCTGGCGAGAGA...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS-3UTR GCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACACCCCAAAGGAGACACTaGGCTTCCGGCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITPQRRH*ASGQTW
Trigger: CCATGTTTGGCCGGAAGCGCAGTGTCTCCTTTGGGG...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR GCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACATGGGGTCCCGGCTTCTaGTCTTCAAGCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITWGPGF*SSSLIP
Trigger: GGGGATCAAGCTTGAAGAGCAGAAGCCGGGACCCCA...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTCCTCCTCACAGATaGTGCTCCCCAGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAPPPHR*CSPAML
Trigger: CAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGG...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAACCCTGGCTTCACCCTTaGACTCGAGCTTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKPWLHP*TRACSQ
Trigger: TTGGCTACAAGCTCGAGTGCAAGGGTGAAGCCAGGG...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCCTGGCTTCACCCTTaGACTCGAGCTTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELPWLHP*TRACSQ
Trigger: TTGGCTACAAGCTCGAGTGCAAGGGTGAAGCCAGGG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGGTACTCGATCCCCTCTaGTTCCTCGCACTTGACGGA +
Preference number: 4 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMVLDPL*FLALDG
Trigger: TCCGTCAAGTGCGAGGAAGCAGAGGGGATCGAGTAC...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGGACACTGGGAAGCTTaGTCAGTCCAGCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAGHWEA*SVQPRG
Trigger: TCCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGAAACCTTTGAAATCCTaGAGTGTGATCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGKPLKS*SVIVSP
Trigger: GGGGGACACGATCACACTGCAGGATTTCAAAGGTTT...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCCGGTCCTCCAGCTTTaGAAACTTGTCCGACTTGCA +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEPVLQL*KLVRLA
Trigger: TGCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGG...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGCCTCCACCACCGAGTaGGTTCCTGGTAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAASTTE*VPGSKA
Trigger: GGCTTTACTACCAGGAACGCACTCGGTGGTGGAGGC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACATCAGTCCAGGAAGTGTaGAGCGCAGTTCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITSVQEV*SAVLAR
Trigger: ACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGA...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAACCAGCATCCTTGACTaGTCACCTCCATGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKTSILD*SPPCQC
Trigger: GCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGT...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTTTTTTCCCTGGCCTCTaGCCCCATTACACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAFFPGL*PHYTAP
Trigger: GGGGGCTGTGTAATGGGGGCAGAGGCCAGGGAAAAA...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGCTTCCGGCCAAACATaGTTGTGGCTGCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHASGQT*LWLQSP
Trigger: CGGGCTCTGCAGCCACAACCATGTTTGGCCGGAAGC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTGTCGATGCTGGGGTATaGGATATAGTCGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPVDAGV*DIVVLV
Trigger: AACAAGGACGACTATATCCCATACCCCAGCATCGAC...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGAACTCCTTAAAAGCTaGGCTCTCCTCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGELLKS*ALLIVP
Trigger: GGGAACAATGAGGAGAGCCCAGCTTTTAAGGAGTTC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGAGGCATGTAAGAAATTaGAGGCTATCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVRHVRN*RLSCLG
Trigger: TCCCAGACATGATAGCCTCCAATTTCTTACATGCCT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAAGAGACCTTGTAGGATaGGGTCTCTGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELRDLVG*GLCAWG
Trigger: ACCCCAGGCACAGAGACCCCATCCTACAAGGTCTCT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACACCATCTGGGGTCTTaGGTGTGCTGGATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELHHLGS*VCWMCC
Trigger: ACAGCACATCCAGCACACCCAAGACCCCAGATGGTG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAAGGAGGAGCGGGAGATaGCACGGCCGTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTRRSGR*HGRFPS
Trigger: TGAAGGAAAACGGCCGTGCCATCTCCCGCTCCTCCT...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCCTCACCAGCATCCTTGACTGCTCACCTCCATGCCAGTGCCAAAGCAGCAGCCGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 4 (lower is better)
Translates to: SLTSILDCSPPCQCQSSSRILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...GCTGCTGCTTTGGCACTGGCATGGAGGTGAGCAGTCAAGGATGCTGGTGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAGCCTACGTCAGCAGATaGGAAAGGCGTTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELAYVSR*ERRSAQ
Trigger: CTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGC...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGAGCATGGTGACAACCTaGAAACCCCAAAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPESMVTT*KPQRTP
Trigger: TGGGGTCCTTTGGGGTTTCCAGGTTGTCACCATGCT...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTGGAAGTGCACACTCTaGAAGCCACAGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIWKCTL*KPQDGA
Trigger: AGCTCCATCCTGTGGCTTCCAGAGTGTGCACTTCCA...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTTTTGAGCCCCAAGACTaGGCGCAGCATAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPFEPQD*AQHKRK
Trigger: TTTCCTTTTATGCTGCGCCCAGTCTTGGGGCTCAAA...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGCAGAGGAAGGGACCCTaGGTTGAGGGTTCTAATCCC +
Preference number: 4 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQQRKGP*VEGSNP
Trigger: GGGATTAGAACCCTCAACCCAGGGTCCCTTCCTCTG...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCAAAGCAGCAGCTAACTaGCTTCCCCAAAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSKAAAN*LPQNPG
Trigger: CCCTGGGTTTTGGGGAAGCCAGTTAGCTGCTGCTTT...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGAAAGCCTTTGCAATCTaGGGGACACTGGGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQKAFAI*GTLGSL
Trigger: CAAGCTTCCCAGTGTCCCTCAGATTGCAAAGGCTTT...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGGGTACAGGACAGGATTaGATCTCAGTCCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQGTGQD*ISVPLH
Trigger: ATGCAGTGGGACTGAGATTCAATCCTGTCCTGTACC...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCATCTTCCCGCGCAGTaGCAGAGACCTTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAHLPAQ*QRPCRM
Trigger: CATCCTACAAGGTCTCTGTCACTGCGCGGGAAGATG...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATCAAACACCTCCTGCTTaGAGGGTGAGGTCGTGGACG +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHQTPPA*RVRSWT
Trigger: CGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTG...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACAGAGCTGGCATGGCTaGGCTTGTCAAAGCGGAATT +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELQSWHG*ACQSGI
Trigger: AATTCCGCTTTGACAAGCTCAGCCATGCCAGCTCTG...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGAAACCCTTCAGATGTaGCAGCTGCCTACAGACCCG +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTETLQM*QLPTDP
Trigger: CGGGTCTGTAGGCAGCTGTCACATCTGAAGGGTTTC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGAGTCACGAGGGCCAATaGGGTTTGGGCAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPESHEGQ*GLGKSL
Trigger: CAAAGATTTGCCCAAACCTCATTGGCCCTCGTGACT...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCCCAGCAGGCTTGTGTTaGGATGATGCTGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIPAGLC*DDADKA
Trigger: AGCTTTGTCAGCATCATCTCAACACAAGCCTGCTGG...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCCACAACCTCGTCGATaGTGGGGTATGGGATATAGT +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQPQPRR*WGMGYS
Trigger: ACTATATCCCATACCCCAGCATCGACGAGGTTGTGG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTGAATCTCAGTCCCACTaGATCATCACAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: IRMASRMLRILAPGNMGPESQSH*IITESL
Trigger: AAGGCTTTCTGTGATGATGCAGTGGGACTGAGATTC...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGATCTCGGGGAGTTTCTaGTTTTGGCATCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SRWERRSAQKQIDGLELQISGSF*FWHLWD
Trigger: GTCCCACAGATGCCAAAAGCAGAAACTCCCCGAGAT...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAACGGCACTCCCAAACTaGTGGTACAGGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELTALPN*WYRSLF
Trigger: GAAAAGGCTCCTGTACCAGCAGTTTGGGAGTGCCGT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGAGATGGGGTCCAGGTTaGAGAAACCCTTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQRWGPG*RNPSDV
Trigger: CACATCTGAAGGGTTTCTGCAACCTGGACCCCATCT...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTTTTTCCCTGGCCTCTaGCCCCATTACACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHFFPGL*PHYTAP
Trigger: GGGGGCTGTGTAATGGGGGCAGAGGCCAGGGAAAAA...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTCAGACTTGCCAGCATaGTCTTGTCGATCCATCCGA +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRISDLPA*SCRSIR
Trigger: TCGGATGGATCGACAAGACCATGCTGGCAAGTCTGA...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGTCTCCGTCGGTAAATaGCAGCTTTGTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEVSVGK*QLCGNV
Trigger: CACGTTTCCACAAAGCTGCCATTTACCGACGGAGAC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGGCGTGTTTTCCTCTTaGAAGATGATGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQGVFSS*KMMATM
Trigger: CATCGTGGCCATCATCTTCCAAGAGGAAAACACGCC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGGAGGCTATCATGTCTaGGACAAACGGCGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIGGYHV*DKRRVF
Trigger: GAAAACACGCCGTTTGTCCCAGACATGATAGCCTCC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAAGAGACCTTGTAGGATaGGGTCTCTGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTRDLVG*GLCAWG
Trigger: ACCCCAGGCACAGAGACCCCATCCTACAAGGTCTCT...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGGGTCTTGGGTGTGCTaGATGTGCTGTCACATCGTG +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDGSWVC*MCCHIV
Trigger: CACGATGTGACAGCACATCCAGCACACCCAAGACCC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACACACCATCTGGGGTCTTaGGTGTGCTGGATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTHHLGS*VCWMCC
Trigger: ACAGCACATCCAGCACACCCAAGACCCCAGATGGTG...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCCGGAGAGCTGGGATTaGATGAGGTCTCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEPESWD*MRSQTL
Trigger: TAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGG...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCCGGAGAGCTGGGATTaGATGAGGTCTCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYPESWD*MRSQTL
Trigger: TAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGG...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAAGGGCTTCTCCTTGTTaGGGCAGATTTCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITRASPC*GRFPES
Trigger: GCTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCT...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGCCTACGTCAGCAGATaGGAAAGGCGTTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITAYVSR*ERRSAQ
Trigger: CTGTGCTGAACGCCTTTCCCATCTGCTGACGTAGGC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACCTCTCCTCGAGTAAGTaGGGAGGGGAGATAACGACG +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDLSSSK*GGEITT
Trigger: CGTCGTTATCTCCCCTCCCCACTTACTCGAGGAGAG...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGTGGAAGTGCACACTCTaGAAGCCACAGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMWKCTL*KPQDGA
Trigger: AGCTCCATCCTGTGGCTTCCAGAGTGTGCACTTCCA...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGCATTACATAGGCAGTTaGGATCTACGAATCACCTCC +
Preference number: 4 (lower is better)
Translates to: KAFSTEADRRFRAPELRGHYIGS*DLRITS
Trigger: GGAGGTGATTCGTAGATCCCAACTGCCTATGTAATG...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGTCTTGTCGATCCTaGAGGGAGACTCGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTWSCRS*RETRGQ
Trigger: CTGACCTCGAGTCTCCCTCCAGGATCGACAAGACCA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637138.1
3UTR CAA 72 bp GAGAAAGTACTAGCAAAGGGAGAGCTCCTCTCCAGCTaGCAAACAGGACTCAATCATTCCCACACACGTGGC +
Preference number: 4 (lower is better)
Translates to: EKVLAKGELLSS*QTGLNHSHTRG
Trigger: GCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTGGAGAGGAGCTCTCCCTTTGCTAGTACTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACACAAATGTGTTGGGGCTaGGGTTGTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTQMCWG*GCPLPP
Trigger: AGGAGGAAGAGGACAACCTCAGCCCCAACACATTTG...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGGAATGTTGTGTACACTaGTTCCACCCCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMECCVH*FHPCLS
Trigger: GGACAGACAGGGGTGGAATCAGTGTACACAACATTC...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAAATGGGACAGCATGGTaGCAACCTGGAAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELNGTAW*QPGNPK
Trigger: TTTGGGGTTTCCAGGTTGTCACCATGCTGTCCCATT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACTTTTTAAGCGTCAACTaGGCTGGAGGCATATGGGTG +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYFLSVN*AGGIWV
Trigger: CACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAA...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTATCAAGTTCCCCAGGCTaGTGCCGGTACAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELSSSPG*CRYSKS
Trigger: ACTTTTACTGTACCGGCAGCAGCCTGGGGAACTTGA...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTAAACCTTTGAAATCCTaGAGTGTGATCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIKPLKS*SVIVSP
Trigger: GGGGGACACGATCACACTGCAGGATTTCAAAGGTTT...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACCCTTCTGAGCCCGTGTaGAGGCGGGGGAAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDPSEPV*RRGKSP
Trigger: GGGGCTCTTCCCCCGCCTGCACACGGGCTCAGAAGG...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGGATGGCCTCAAGGATaGTACGAATCTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTGWPQG*YESWLL
Trigger: CAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAAGATGGGGTCCAGGTTaGAGAAACCCTTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELRWGPG*RNPSDV
Trigger: CACATCTGAAGGGTTTCTGCAACCTGGACCCCATCT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGAAAACAGGAGAGAGCTaGACGCATGCTAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQKTGES*THAKEQ
Trigger: CTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTT...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAATAGCCCCCAAACTGTaGCAGGATGACCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITIAPKL*QDDLRV
Trigger: TACCCTCAGGTCATCCTGCCACAGTTTGGGGGCTAT...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGAACTCCTTAAAAGCTaGGCTCTCCTCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIELLKS*ALLIVP
Trigger: GGGAACAATGAGGAGAGCCCAGCTTTTAAGGAGTTC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGAACTCCTTAAAAGCTaGGCTCTCCTCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: WERRSAQKQIDGLELQSYELLKS*ALLIVP
Trigger: GGGAACAATGAGGAGAGCCCAGCTTTTAAGGAGTTC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACATTTCTCTGGAGCTGCTaGGCGTCTCCGTCGGTAAAT +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITFLWSC*ASPSVN
Trigger: ATTTACCGACGGAGACGCCCAGCAGCTCCAGAGAAA...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATATGTGTCTCTTTCTCTaGAGCTGCTGGGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHMCLFL*SCWASP
Trigger: CGGAGACGCCCAGCAGCTCCAGAGAAAGAGACACAT...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGAAATCCTTGTCATTaGTCGTGGGGCAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHGNPCH*SWGRCP
Trigger: TGGGCACCTGCCCCACGACCAATGACAAGGATTTCC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGGTACAGGACAGGATTaGATCTCAGTCCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITGTGQD*ISVPLH
Trigger: ATGCAGTGGGACTGAGATTCAATCCTGTCCTGTACC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGAATGTTGTGTACACTaGTTCCACCCCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDECCVH*FHPCLS
Trigger: GGACAGACAGGGGTGGAATCAGTGTACACAACATTC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGAATGTTGTGTACACTaGTTCCACCCCTGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAECCVH*FHPCLS
Trigger: GGACAGACAGGGGTGGAATCAGTGTACACAACATTC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTTTCCTTCAACTTCATaGAGGGCTTCTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIFPSTS*RASPCW
Trigger: CCAACAAGGAGAAGCCCTTCATGAAGTTGAAGGAAA...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGAGAAAGGTAGTGTTTaGGTTGGCACCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHEKGSV*VGTWQG
Trigger: ACCCTGCCAGGTGCCAACTCAAACACTACCTTTCTC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGAT +
Preference number: 4 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQLDLQT*QHGLVD
Trigger: ATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAG...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCTCAAGCTTGATCCCCTaGATTTTCTCCAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKISSLIP*IFSSIS
Trigger: TGAGATGCTGGAGAAAATGCAGGGGATCAAGCTTGA...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254695.13
CDS-3UTR GCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATCAAGTTCCCCAGGCTaGTGCCGGTACAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTSSSPG*CRYSKS
Trigger: ACTTTTACTGTACCGGCAGCAGCCTGGGGAACTTGA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACACAACCTCGTCGATGCTaGGGTATGGGATATAGTCGT +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTQPRRC*GMGYSR
Trigger: ACGACTATATCCCATACCCCAGCATCGACGAGGTTG...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATATAGCCCCCAAACTGTaGCAGGATGACCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHIAPKL*QDDLRV
Trigger: TACCCTCAGGTCATCCTGCCACAGTTTGGGGGCTAT...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTTTCTCTGGAGCTGCTaGGCGTCTCCGTCGGTAAAT +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHFLWSC*ASPSVN
Trigger: ATTTACCGACGGAGACGCCCAGCAGCTCCAGAGAAA...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGGCGTGTTTTCCTCTTaGAAGATGATGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTGVFSS*KMMATM
Trigger: CATCGTGGCCATCATCTTCCAAGAGGAAAACACGCC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCGGAGAGCTGGGATTaGATGAGGTCTCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAPESWD*MRSQTL
Trigger: TAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGG...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTAGATTTCCGGAGAGCTaGGATTGGATGAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILARFPES*DWMRSQ
Trigger: CTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCT...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGTATGGGATTCCCAAATaGGACAGCATGGTGACAACC +
Preference number: 4 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQYGIPK*DSMVTT
Trigger: GGTTGTCACCATGCTGTCCCATTTGGGAATCCCATA...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAACCCTCCTCGTTTTCTTaGTTCAAGCTGCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKPSSFS*FKLHPK
Trigger: CTTTGGATGCAGCTTGAACCAAGAAAACGAGGAGGG...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAAAAGTCGTCGTCACATaGAGCATCACTTCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: MGKAFSTEADRRFRAPELKVVVT*SITSKP
Trigger: TGGCTTGGAAGTGATGCTCCATGTGACGACGACTTT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGTCGATGCTGGGGTATaGGATATAGTCGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAVDAGV*DIVVLH
Trigger: ATGCAGGACGACTATATCCCATACCCCAGCATCGAC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366401.8
3UTR CAA 72 bp ATCCTGCAACTGTTCTTAAAGAAATGCAGTTTGACCTaGCCAGTGCCTCCAGAAGCCCAGCCAACAAAACGC +
Preference number: 4 (lower is better)
Translates to: ILQLFLKKCSLT*PVPPEAQPTKR
Trigger: GCGTTTTGTTGGCTGGGCTTCTGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAAGAACAGTTGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
3UTR CAA 72 bp CCTGGGCTAAGATTTCTCATCTGGACGATGACATGGTaGGATGAGATGCTAAAAAGAGCCAGCAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGLRFLIWTMTW*DEMLKRASRLV
Trigger: CACAAGCCTGCTGGCTCTTTTTAGCATCTCATCCAACCATGTCATCGTCCAGATGAGAAATCTTAGCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACATCTGCTCTTCAAGCTTaGTCCCCTGCATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITSALQA*SPAFSP
Trigger: TGGAGAAAATGCAGGGGATCAAGCTTGAAGAGCAGA...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR TCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACTGGGGGCTGCTACGGTaGCTCTTCATAAAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDWGLLR*LFIKAK
Trigger: TTTAGCTTTTATGAAGAGTCACCGTAGCAGCCCCCA...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACATGGGGGCTGCTACGGTaGCTCTTCATAAAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITWGLLR*LFIKAK
Trigger: TTTAGCTTTTATGAAGAGTCACCGTAGCAGCCCCCA...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTTTTAAGCGTCAACTaGGCTGGAGGCATATGGGTG +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTFLSVN*AGGIWV
Trigger: CACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCGCCCCCATCAGGAGCTaGAGAACCGATCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIAPIRS*RTDPTE
Trigger: CTCAGTGGGATCGGTTCTTCAGCTCCTGATGGGGGC...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAAAACCTTTGAAATCCTaGAGTGTGATCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTKPLKS*SVIVSP
Trigger: GGGGGACACGATCACACTGCAGGATTTCAAAGGTTT...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAAGATCACAGTGGAAATaGCTCAAACACCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITRSQWK*LKHQRE
Trigger: CTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCT...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTTCTTGGTTCAAGCTaGATCCAAAGCCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTFLGSS*IQSPRV
Trigger: GACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACTTTCTTGGTTCAAGCTaGATCCAAAGCCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDFLGSS*IQSPRV
Trigger: GACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAA...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGTCTCCGTCGGTAAATaGCAGCTTTGTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHVSVGK*QLCGNV
Trigger: CACGTTTCCACAAAGCTGCCATTTACCGACGGAGAC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCAGGCATGTAAGAAATTaGAGGCTATCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIRHVRN*RLSCLG
Trigger: TCCCAGACATGATAGCCTCCAATTTCTTACATGCCT...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCACCTCCATGCTGTTGTaGGAGATGCCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NVILHDWHRQTLSLRPSITSMLL*EMPPLR
Trigger: CCTCAGCGGGGGCATCTCCCACAACAGCATGGAGGT...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CAGCTTGCAAACAGGACTCAATCATTCCCACACACGTGGCGGGGAAGAAAGATCCGAATTTTATCAGGATaGCCTCAAGGATGCTACGAA +
Preference number: 4 (lower is better)
Translates to: QLANRTQSFPHTWRGRKIRILSG*PQGCYE
Trigger: TTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG...GATCTTTCTTCCCCGCCACGTGTGTGGGAATGATTGAGTCCTGTTTGCAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCTCAGGAGAAACCGGGTaGGACCCAAAGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: NVILHDWHRQTLSLRPSISGETG*DPKSPP
Trigger: AGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGA...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCCTCCTCGTTTTCTTaGTTCAAGCTGCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILAPSSFS*FKLHPK
Trigger: CTTTGGATGCAGCTTGAACCAAGAAAACGAGGAGGG...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACGGATGTCCTTGGAGGTaGGCTGGCTGTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDGCPWR*AGCPSK
Trigger: CTTGCTGGGACAGCCAGCTCACCTCCAAGGACATCC...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATCAAGCTTGATCCCCTaGATTTTCTCCAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: RILSGWPQGCYESWLLGTSSLIP*IFSSIS
Trigger: TGAGATGCTGGAGAAAATGCAGGGGATCAAGCTTGA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATAGTTCCCCAGGCTGCTaGCGGTACAGTAAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHSSPGC*RYSKSL
Trigger: TAAACTTTTACTGTACCGGCAGCAGCCTGGGGAACT...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGAATCTCAGTCCCACTaGATCATCACAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDESQSH*IITESL
Trigger: AAGGCTTTCTGTGATGATGCAGTGGGACTGAGATTC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATAAACCTTTGAAATCCTaGAGTGTGATCGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHKPLKS*SVIVSP
Trigger: GGGGGACACGATCACACTGCAGGATTTCAAAGGTTT...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACTGGGTGTGCTGGATGTaGTGTCACATCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDWVCWM*CHIVPG
Trigger: GCCGGGCACGATGTGACAGCACATCCAGCACACCCA...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGACAAAGCTGAACCACTaGATCTTTTTCAAGAAACGT +
Preference number: 4 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQTKLNH*IFFKKR
Trigger: ACGTTTCTTGAAAAAGATTCAGTGGTTCAGCTTTGT...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTCAAGCTTGATCCCCTaGATTTTCTCCAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHSSLIP*IFSSIS
Trigger: TGAGATGCTGGAGAAAATGCAGGGGATCAAGCTTGA...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR GCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACTCAGTCCAGGAAGTGTaGAGCGCAGTTCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDSVQEV*SAVLAR
Trigger: ACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGA...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR GCA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATACTCGAACCCCCAACTaGTTAAAACAGATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHTRTPN*LKQICL
Trigger: GAGACAGATCTGTTTTAAGCAGTTGGGGGTTCGAGT...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACAGGCATGTAAGAAATTaGAGGCTATCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDRHVRN*RLSCLG
Trigger: TCCCAGACATGATAGCCTCCAATTTCTTACATGCCT...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTAGGCATGTAAGAAATTaGAGGCTATCATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: AIAPNFIRMASRMLRILARHVRN*RLSCLG
Trigger: TCCCAGACATGATAGCCTCCAATTTCTTACATGCCT...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCAGGGCTTCTCCTTGTTaGGGCAGATTTCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIRASPC*GRFPES
Trigger: GCTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCT...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCCAGGCTCGTTGTACCTaGAGGATGCCCACCTTAACC +
Preference number: 4 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIQARCT*RMPTLT
Trigger: GGTTAAGGTGGGCATCCTCCAGGTACAACGAGCCTG...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGAATAAAGCATTCAGCTaGAAATCCTTGTCATTGGTC +
Preference number: 4 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQNKAFS*KSLSLV
Trigger: GACCAATGACAAGGATTTCCAGCTGAATGCTTTATT...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACAAGAGGGGATTCCCTTaGACAGGCGAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDKRGFP*TGEGLH
Trigger: GTGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTT...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCGGTACAGGACAGGATTaGATCTCAGTCCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIGTGQD*ISVPLH
Trigger: ATGCAGTGGGACTGAGATTCAATCCTGTCCTGTACC...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACCAGAGCTGGCATGGCTaGGCTTGTCAAAGCGGAATT +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDQSWHG*ACQSGI
Trigger: AATTCCGCTTTGACAAGCTCAGCCATGCCAGCTCTG...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACACAAAGCTGAACCACTaGATCTTTTTCAAGAAACGT +
Preference number: 4 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDTKLNH*IFFKKR
Trigger: ACGTTTCTTGAAAAAGATTCAGTGGTTCAGCTTTGT...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAAATAAAGCATTCAGCTaGAAATCCTTGTCATTGGTC +
Preference number: 4 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITNKAFS*KSLSLV
Trigger: GACCAATGACAAGGATTTCCAGCTGAATGCTTTATT...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR TCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACTCTGCTCTTCAAGCTTaGTCCCCTGCATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDSALQA*SPAFSP
Trigger: TGGAGAAAATGCAGGGGATCAAGCTTGAAGAGCAGA...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000254695.13
CDS-3UTR GCA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCGAATCTCAGTCCCACTaGATCATCACAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIESQSH*IITESL
Trigger: AAGGCTTTCTGTGATGATGCAGTGGGACTGAGATTC...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CCA 90 bp GCTGAACCACTGAATCTTTTTCAAGAAACGTCATTTTACATGATTGGCATAGACGTAGTATTTATATCTTaGGCACAGGTCCAGATCCCT +
Preference number: 4 (lower is better)
Translates to: AEPLNLFQETSFYMIGIDVVFIS*AQVQIP
Trigger: AGGGATCTGGACCTGTGCCCAAGATATAAATACTAC...GTCTATGCCAATCATGTAAAATGACGTTTCTTGAAAAAGATTCAGTGGTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS GCA 90 bp CTGTCACATCGTGCCCGGCTGTCGCCCTGGCCTTCTGAGCCCGTGTaGAGGCGGGGGAAGAGCCCCGAGCGTCGCTTGATGGGACTCCGT +
Preference number: 5 (lower is better)
Translates to: LSHRARLSPWPSEPV*RRGKSPERRLMGLR
Trigger: ACGGAGTCCCATCAAGCGACGCTCGGGGCTCTTCCCCCGCCTGCACACGGGCTCAGAAGGCCAGGGCGACAGCCGGGCACGATGTGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS GCA 90 bp TGGAAGGCTGTCAGCGTCCTCTCCTCGATTCGGAACCGCCCTTCCTaGACGTACCAGCGCACCAGCTGCCAGCGCTTCTCCCCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: WKAVSVLSSIRNRPS*TYQRTSCQRFSPGA
Trigger: GGCGCCGGGGGAGAAGCGCTGGCAGCTGGTGCGCTGGTACGTGCAGGAAGGGCGGTTCCGAATCGAGGAGAGGACGCTGACAGCCTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637138.1
CDS CCA 90 bp CCCCCGCTGAGGCTGCCAGGGATGCCCCCACTGTGCGACTTCTTCTaGCCGCCCACCATGGTCTCCATGGAGTGGCTGCGTACGCGGATG +
Preference number: 5 (lower is better)
Translates to: PPLRLPGMPPLCDFF*PPTMVSMEWLRTRM
Trigger: CATCCGCGTACGCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAGTGGGGGCATCCCTGGCAGCCTCAGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS TCA 90 bp GGCTCTCGCTGCTCGGGGACGGGCTGTAGACAAACACCTCCTGCTTaGAGGGTGAGGTCGTGGACGGCTGGCTGCCCCCACTGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: GSRCSGTGCRQTPPA*RVRSWTAGCPHCRP
Trigger: AGGGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGTCTACAGCCCGTCCCCGAGCAGCGAGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS TCA 90 bp GTGCAGGCGGGGGAAGAGCCCCGAGCGTCGCTTGATGGGACTCCGTaGCTGGTTCTTCACCGTTGCCGCCACCACTGGAGGCGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: VQAGEEPRASLDGTP*LVLHRCRHHWRREG
Trigger: ACCTTCTCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCTCTTCCCCCGCCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS TCA 90 bp GCTGCTCGGGGACGGGCTGTAGACAAACACCTCCTGCTTGAAGGGTaGGGTCGTGGACGGCTGGCTGCCCCCACTGTCGCCCTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: AARGRAVDKHLLLEG*GRGRLAAPTVALLH
Trigger: ATGGAGGAGGGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGTCTACAGCCCGTCCCCGAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 90 bp CTTCATGGTGGGAGGTGCCGTGAGAGGAGGGGAGAGCGGCCGGTCTaGGAGGGTCGCATCCGAGCTGTTGGCCAGCTCCTGCTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: LHGGRCRERRGERPV*EGRIRAVGQLLLLD
Trigger: GTCAAGAAGCAGGAGCTGGCCAACAGCTCGGATGCGACCCTCCCAGACCGGCCGCTCTCCCCTCCTCTCACGGCACCTCCCACCATGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 90 bp AGGCGGGGGAAGAGCCCCGAGCGTCGCTTGATGGGACTCCGTGACTaGTTCTTCACCGTTGCCGCCACCACTGGAGGCGAGAAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RRGKSPERRLMGLRD*FFTVAATTGGEKVV
Trigger: GACCACCTTCTCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCTCTTCCCCCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 90 bp CTCAGGAGCAGGAGGGCACCTGATGTAAGGGTGCCCCACCTTGCGTaGCCCGAGAAGCTGCGCATAGCCACGGCTTTGGTGGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LRSRRAPDVRVPHLA*PEKLRIATALVGSG
Trigger: GCCACTGCCCACCAAAGCCGTGGCTATGCGCAGCTTCTCGGGCCACGCAAGGTGGGGCACCCTTACATCAGGTGCCCTCCTGCTCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAAGCCCCGAGCGTCGCTaGATGGGACTCCGTGACTGG +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVSPERR*MGLRDW
Trigger: CCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCT...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSALALS*NWLEPR
Trigger: GCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGAGGGCTCTGCTGCCCTaGGCCCTAGTGGGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLRALLP*ALVGLV
Trigger: GACAAGCCCCACTAGGGCCAAGGGCAGCAGAGCCCT...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS CCA 90 bp ACCACTGGAGGCGAGAAGGTGGTCTTGGTGACCTCCATGCTGTTGTaGGAGATGCCCCCGCTGAGGCTGCCAGGGATGCCCCCACTGTGC +
Preference number: 5 (lower is better)
Translates to: TTGGEKVVLVTSMLL*EMPPLRLPGMPPLC
Trigger: GCACAGTGGGGGCATCCCTGGCAGCCTCAGCGGGGGCATCTCCCACAACAGCATGGAGGTCACCAAGACCACCTTCTCGCCTCCAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 90 bp TGCGTGGCCCGAGAAGCTGCGCATAGCCACGGCTTTGGTGGGCAGTaGCGTCCAGAGTGCGTGATGGGAGCCGGGGGTGAAGGTCCATAT +
Preference number: 5 (lower is better)
Translates to: CVAREAAHSHGFGGQ*RPECVMGAGGEGPY
Trigger: ATATGGACCTTCACCCCCGGCTCCCATCACGCACTCTGGACGCCACTGCCCACCAAAGCCGTGGCTATGCGCAGCTTCTCGGGCCACGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGGACACTGGGAAGCTaGCTCAGTCCAGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLGTLGS*LSPAKG
Trigger: CCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCCC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGTGACCTCCATGCTGTaGTGGGAGATGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVVTSML*WEMPPL
Trigger: CAGCGGGGGCATCTCCCACAACAGCATGGAGGTCAC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAACTGGTTCTTCACCGTaGCCGCCACCACTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVTGSSP*PPPLEA
Trigger: CGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGT...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SGSELELAGAPLTVHWQQALALS*NWLEPR
Trigger: GCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGC...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCGGCTCTTCAGGCTCGTaGTACCTGGAGGATGCCCAC +
Preference number: 5 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLGSSGS*YLEDAH
Trigger: GTGGGCATCCTCCAGGTACAACGAGCCTGAAGAGCC...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS CCA 90 bp TCCGTACAGGAAGGAGGGGACGACGCGGACGTCGGGAGCAAGGGGTaGGGAACACGCCTGCCCATGGCTACAGCTCACTGGATACACTCA +
Preference number: 5 (lower is better)
Translates to: SVQEGGDDADVGSKG*GTRLPMATAHWIHS
Trigger: TGAGTGTATCCAGTGAGCTGTAGCCATGGGCAGGCGTGTTCCCCACCCCTTGCTCCCGACGTCCGCGTCGTCCCCTCCTTCCTGTACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGTGCTCCCCAGCGATGTaGGGGTGCCCACGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPCSPAM*GCPRSP
Trigger: CGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCA...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGGGGACACTGGGAAGCTaGCTCAGTCCAGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SGSELELAGAPLTVHWQQGTLGS*LSPAKG
Trigger: CCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCCC...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTGGGACACTGGGAAGCTaGCTCAGTCCAGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: KVPASVQEVCSAVLARPAGTLGS*LSPAKG
Trigger: CCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCCC...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCAGCCCCGAGCGTCGCTaGATGGGACTCCGTGACTGG +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPSPERR*MGLRDW
Trigger: CCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS TCA 90 bp GGACAGAAGAGGGGATTCCCTGAGGAGACAAGGAGGAGGCGGCGATaGGCGAACATTCCGTACAGGAAGGAGGGGACGACGCGGACGTCG +
Preference number: 5 (lower is better)
Translates to: GQKRGFPEETRRRRR*ANIPYRKEGTTRTS
Trigger: CGACGTCCGCGTCGTCCCCTCCTTCCTGTACGGAATGTTCGCTCATCGCCGCCTCCTCCTTGTCTCCTCAGGGAATCCCCTCTTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS GCA 90 bp CCAGCATGGTCTTGTCGATCCATCCGAAGCCCCCAAAGGAGACACTaGGCTTCCGGCCAAACATGGTTGTGGCTGCAGAGCCCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PAWSCRSIRSPQRRH*ASGQTWLWLQSPGS
Trigger: GGACCCCGGGCTCTGCAGCCACAACCATGTTTGGCCGGAAGCGCAGTGTCTCCTTTGGGGGCTTCGGATGGATCGACAAGACCATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS CCA 90 bp CTCTCAGCTGGCCAGGAGGCAGAGGGCGTGTTCCAGGGCTCCACGTaGCCGAAGCTGGCCTTTCCCACCCTCACTCTCTTACTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LSAGQEAEGVFQGST*PKLAFPTLTLLLLL
Trigger: AAGGAGAAGTAAGAGAGTGAGGGTGGGAAAGGCCAGCTTCGGCCACGTGGAGCCCTGGAACACGCCCTCTGCCTCCTGGCCAGCTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575979.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATCCGGCCAAACATGGTaGTGGCTGCAGAGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRSGQTW*WLQSPG
Trigger: CCCCGGGCTCTGCAGCCACAACCATGTTTGGCCGGA...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CAA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGCCAGCTCCTGCTTCTaGACCTTCAGACTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQASSCF*TFRLAS
Trigger: GCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGC...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCAGCTCCTGCTTCTaGACCTTCAGACTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLASSCF*TFRLAS
Trigger: GCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCTGCTCCCCAGCGATGTaGGGGTGCCCACGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVCSPAM*GCPRSP
Trigger: CGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCA...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATGCTCCCCAGCGATGTaGGGGTGCCCACGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRCSPAM*GCPRSP
Trigger: CGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCA...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCGGGACACTGGGAAGCTaGCTCAGTCCAGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPGTLGS*LSPAKG
Trigger: CCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCCC...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGCAAACTTGTCCGACTaGCAGCAGGCGTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVANLSD*QQAFSA
Trigger: TGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCAAACTTGTCCGACTaGCAGCAGGCGTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLANLSD*QQAFSA
Trigger: TGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCAAACTTGTCCGACTaGCAGCAGGCGTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: PKVPASVQEVCSAVLARPANLSD*QQAFSA
Trigger: TGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGC...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGGGCGAGAAGGTGGTCTaGGTGACCTCCATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQGEKVV*VTSMLL
Trigger: CAACAGCATGGAGGTCACCAAGACCACCTTCTCGCC...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCACTGGTTCTTCACCGTaGCCGCCACCACTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPTGSSP*PPPLEA
Trigger: CGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGT...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGAAGGGCTTCTCCTTGTaGGGGCAGATTTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGKGFSL*GQISGE
Trigger: CTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCTT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTGGGGAGTTTCTGCTTTaGGCATCTGTGGGACTCCGG +
Preference number: 5 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVGEFLL*ASVGLR
Trigger: CCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCCC...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCGGGGAGTTTCTGCTTTaGGCATCTGTGGGACTCCGG +
Preference number: 5 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSGEFLL*ASVGLR
Trigger: CCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCCC...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGG +
Preference number: 5 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLRMLRI*APGNMG
Trigger: CCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGTGGAAATCCTTGTCATaGGTCGTGGGGCAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLWKSLS*VVGQVP
Trigger: GGGCACCTGCCCCACGACCAATGACAAGGATTTCCA...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS TCA 90 bp CTGCGCATAGCCACGGCTTTGGTGGGCAGTGGCGTCCAGAGTGCGTaGTGGGAGCCGGGGGTGAAGGTCCATATGCCCATTTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LRIATALVGSGVQSA*WEPGVKVHMPICLL
Trigger: CAGAAGACAAATGGGCATATGGACCTTCACCCCCGGCTCCCATCACGCACTCTGGACGCCACTGCCCACCAAAGCCGTGGCTATGCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS TCA 90 bp CCATGGCTACAGCTCACTGGATACACTCAGGAGCAGGAGGGCACCTaGTGTAAGGGTGCCCCACCTTGCGTGGCCCGAGAAGCTGCGCAT +
Preference number: 5 (lower is better)
Translates to: PWLQLTGYTQEQEGT*CKGAPPCVAREAAH
Trigger: ATGCGCAGCTTCTCGGGCCACGCAAGGTGGGGCACCCTTACATCAGGTGCCCTCCTGCTCCTGAGTGTATCCAGTGAGCTGTAGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS GCA 90 bp GAAGCTGCGCATAGCCACGGCTTTGGTGGGCAGTGGCGTCCAGAGTaGGTGATGGGAGCCGGGGGTGAAGGTCCATATGCCCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: EAAHSHGFGGQWRPE*VMGAGGEGPYAHLS
Trigger: AGACAAATGGGCATATGGACCTTCACCCCCGGCTCCCATCACGCACTCTGGACGCCACTGCCCACCAAAGCCGTGGCTATGCGCAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS-3UTR CAA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTCCGGCCAAACATGGTaGTGGCTGCAGAGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVSGQTW*WLQSPG
Trigger: CCCCGGGCTCTGCAGCCACAACCATGTTTGGCCGGA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CAA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCTTGCCAGCATGGTCTaGTCGATCCATCCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: KVPASVQEVCSAVLARPALASMV*SIHPKP
Trigger: GGGCTTCGGATGGATCGACAAGACCATGCTGGCAAG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGTCGCATCCGAGCTGTaGGCCAGCTCCTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPVASEL*ASSCFL
Trigger: CAAGAAGCAGGAGCTGGCCAACAGCTCGGATGCGAC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGTCGCATCCGAGCTGTaGGCCAGCTCCTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GLKDATNLGSWEHGASTTVASEL*ASSCFL
Trigger: CAAGAAGCAGGAGCTGGCCAACAGCTCGGATGCGAC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGGGACACTGGGAAGCTaGCTCAGTCCAGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRGTLGS*LSPAKG
Trigger: CCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCCC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCCTGTCCCGGAATGTaGTGTACACTGATTCCACCC +
Preference number: 5 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWPCPGM*CTLIPP
Trigger: GGGTGGAATCAGTGTACACAACATTCCGGGACAGGG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCGGCGTGTTTTCCTCTaGGAAGATGATGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGRRVFL*EDDGHD
Trigger: ATCGTGGCCATCATCTTCCAAGAGGAAAACACGCCG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTTCGGCATTGGTGAGCTaGGTGAGCAGAAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVSALVS*VSRNSL
Trigger: CAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGA...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGTCGGCATTGGTGAGCTaGGTGAGCAGAAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWSALVS*VSRNSL
Trigger: CAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGA...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTCAGGCGTTCTCGGCATaGGTGAGCTTGGTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: KVPASVQEVCSAVLARPAQAFSA*VSLVSR
Trigger: TCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTG...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGTCCAGCTTTGCAAACTaGTCCGACTTGCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQSSFAN*SDLQQA
Trigger: CGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGA...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGTCCAGCTTTGCAAACTaGTCCGACTTGCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWSSFAN*SDLQQA
Trigger: CGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGA...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCCCTCCATTCTCAAACTaGTCCTCCTCTGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSPPFSN*SSSGPS
Trigger: ACTGGGCCCAGAGGAGGACAAGTTTGAGAATGGAGG...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCCTCCATTCTCAAACTaGTCCTCCTCTGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWPPFSN*SSSGPS
Trigger: ACTGGGCCCAGAGGAGGACAAGTTTGAGAATGGAGG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGACCTCCATGCTGTaGTGGGAGATGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRVTSML*WEMPPL
Trigger: CAGCGGGGGCATCTCCCACAACAGCATGGAGGTCAC...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAACTGGTTCTTCACCGTaGCCGCCACCACTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: AIIRRNRVGPKVPASVQETGSSP*PPPLEA
Trigger: CGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGT...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGAAGGGCTTCTCCTTGTaGGGGCAGATTTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQKGFSL*GQISGE
Trigger: CTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCTT...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAACAAACACCTCCTGCTaGAAGGGTGAGGTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVTNTSC*KGEVVD
Trigger: GTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGT...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCACAAACACCTCCTGCTaGAAGGGTGAGGTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSTNTSC*KGEVVD
Trigger: GTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGT...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGACAAACACCTCCTGCTaGAAGGGTGAGGTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWTNTSC*KGEVVD
Trigger: GTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGT...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGCTGGCATGGCTGAGCTaGTCAAAGCGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGLAWLS*SKRNFR
Trigger: CCTGAAATTCCGCTTTGACAAGCTCAGCCATGCCAG...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCGGCTCTTCAGGCTCGTaGTACCTGGAGGATGCCCAC +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPGSSGS*YLEDAH
Trigger: GTGGGCATCCTCCAGGTACAACGAGCCTGAAGAGCC...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGTTCAGCTGGAAATCCTaGTCATTGGTCGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGFSWKS*SLVVGQ
Trigger: CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAA...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCGAGGGAGACATGGGATaGGGGTGTACAAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPEGDMG*GCTRGW
Trigger: CCAGCCCCTTGTACACCCCAATCCCATGTCTCCCTC...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS CCA 90 bp GTTGTCCTCTTCCTCCTCCTCACAGATGCTGCTCCCCAGCGATGTTaGGGTGCCCACGTTCTCCGGGTCCTCGATCCAATAGCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: VVLFLLLTDAAPQRC*GAHVLRVLDPIAPK
Trigger: TTTGGGGGCTATTGGATCGAGGACCCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGGAAGAGGACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGCCAGCTCCTGCTTCTaGACCTTCAGACTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: GLKDATNLGSWEHGASTTASSCF*TFRLAS
Trigger: GCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGGTCGCATCCGAGCTGTaGGCCAGCTCCTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GEHPKQERAARMLRSRKRVASEL*ASSCFL
Trigger: CAAGAAGCAGGAGCTGGCCAACAGCTCGGATGCGAC...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCGTGTTGGGGCTGAGGTaGTCCTCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPVLGLR*SSSSSS
Trigger: TGAGGAGGAGGAAGAGGACAACCTCAGCCCCAACAC...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGTGTTGGGGCTGAGGTaGTCCTCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPVLGLR*SSSSSS
Trigger: TGAGGAGGAGGAAGAGGACAACCTCAGCCCCAACAC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGTGTACCGTCTTCAGTTaGGACCTAAGGATGACCCGG +
Preference number: 5 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWCTVFS*DLRMTR
Trigger: CCGGGTCATCCTTAGGTCCAAACTGAAGACGGTACA...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGGTACAGGACAGGATaGAATCTCAGTCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: QEQEEPEEGGLVQRWEGLGYRTG*NLSPTA
Trigger: TGCAGTGGGACTGAGATTCAATCCTGTCCTGTACCC...CAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTAGGGTACAGGACAGGATaGAATCTCAGTCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVGYRTG*NLSPTA
Trigger: TGCAGTGGGACTGAGATTCAATCCTGTCCTGTACCC...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGATAGGACACAATCATTaGGGAGGCCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGIGHNH*GGLGVQ
Trigger: CTGTACCCCAAGGCCTCCCAAATGATTGTGTCCTAT...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCACCGAGGCTCATAGGACACAATCATTaGGGAGGCCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: ACHVQEGTALWPRPSPRLIGHNH*GGLGVQ
Trigger: CTGTACCCCAAGGCCTCCCAAATGATTGTGTCCTAT...GAGCCTCGGTGAGGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTCGGCGTGTTTTCCTCTaGGAAGATGATGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSRRVFL*EDDGHD
Trigger: ATCGTGGCCATCATCTTCCAAGAGGAAAACACGCCG...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACGGCGTGTTTTCCTCTaGGAAGATGATGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVRRVFL*EDDGHD
Trigger: ATCGTGGCCATCATCTTCCAAGAGGAAAACACGCCG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTTCCGGTCCTCCAGCTTaGCAAACTTGTCCGACTTGC +
Preference number: 5 (lower is better)
Translates to: KVPASVQEVCSAVLARPASGPPA*QTCPTC
Trigger: GCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGA...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGCCTCCATTCTCAAACTaGTCCTCCTCTGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SGSELELAGAPLTVHWQQPPFSN*SSSGPS
Trigger: ACTGGGCCCAGAGGAGGACAAGTTTGAGAATGGAGG...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCGGCGAGAAGGTGGTCTaGGTGACCTCCATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPGEKVV*VTSMLL
Trigger: CAACAGCATGGAGGTCACCAAGACCACCTTCTCGCC...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCGGGGAGTTTCTGCTTTaGGCATCTGTGGGACTCCGG +
Preference number: 5 (lower is better)
Translates to: PGSKACHVQEGTALWPRPGEFLL*ASVGLR
Trigger: CCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCCC...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGAGCAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGCTGGCATGGCTGAGCTaGTCAAAGCGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSRRNLRKEASSRDGRGWLAWLS*SKRNFR
Trigger: CCTGAAATTCCGCTTTGACAAGCTCAGCCATGCCAG...CCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCAGCAGGGCTGGGACTGTCAGGGTCGTGGACGGCACTCCCAAACTGCTGGTACTGGCATGGCTGAGCTaGTCAAAGCGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: GSRAGTVRVVDGTPKLLVLAWLS*SKRNFR
Trigger: CCTGAAATTCCGCTTTGACAAGCTCAGCCATGCCAG...TACCAGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGCCCTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCACTGGCATGGCTGAGCTaGTCAAAGCGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: PKVPASVQEVCSAVLARPLAWLS*SKRNFR
Trigger: CCTGAAATTCCGCTTTGACAAGCTCAGCCATGCCAG...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGG +
Preference number: 5 (lower is better)
Translates to: SGSELELAGAPLTVHWQQRMLRI*APGNMG
Trigger: CCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCT...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCATCAGCACTGGCTCCTTaGCTCTCCCTGAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: PKVPASVQEVCSAVLARPSALAP*LSLNSF
Trigger: GAAGGAATTCAGGGAGAGCAAAGGAGCCAGTGCTGA...TGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGTGGAAATCCTTGTCATaGGTCGTGGGGCAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGWKSLS*VVGQVP
Trigger: GGGCACCTGCCCCACGACCAATGACAAGGATTTCCA...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGAGCTCCTCTCCAGCTaGCAAACAGGACTCAATCAT +
Preference number: 5 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGELLSS*QTGLNH
Trigger: ATGATTGAGTCCTGTTTGCAAGCTGGAGAGGAGCTC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGTTTGGGCAAATCTTaGAGCCCCAAGACTGGGCGC +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPGLGKS*SPKTGR
Trigger: GCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAACC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCGGCTCTTGTCCTGCCTaGTCACGGGAGCCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: PGSKACHVQEGTALWPRPGSCPA*SREPEF
Trigger: AAACTCAGGCTCCCGTGACAAGGCAGGACAAGAGCC...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGAGGGAGACATGGGATaGGGGTGTACAAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEEGDMG*GCTRGW
Trigger: CCAGCCCCTTGTACACCCCAATCCCATGTCTCCCTC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTTCTGCTTCCTCGCACTaGACGGACAGGATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: KVPASVQEVCSAVLARPASASSH*TDRIKF
Trigger: GAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAGA...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGTCTGCTTCCTCGCACTaGACGGACAGGATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SGSELELAGAPLTVHWQQSASSH*TDRIKF
Trigger: GAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAGA...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCATCACAGAAAGCCTTaGCAATCTGAGGGACACTGG +
Preference number: 5 (lower is better)
Translates to: PKSPPQSRKCAAQFWPVQHHRKP*QSEGHW
Trigger: CCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGATG...CTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCCATCACAGAAAGCCTTaGCAATCTGAGGGACACTGG +
Preference number: 5 (lower is better)
Translates to: QSPRLSPGSVQRSSGPSSHHRKP*QSEGHW
Trigger: CCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGATG...GCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCGGCATTGGTGAGCTaGGTGAGCAGAAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: PGSKACHVQEGTALWPRPSALVS*VSRNSL
Trigger: CAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGA...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGACAGGCGTTCTCGGCATaGGTGAGCTTGGTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRQAFSA*VSLVSR
Trigger: TCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTG...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGTCCGGTCCTCCAGCTTaGCAAACTTGTCCGACTTGC +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPSGPPA*QTCPTC
Trigger: GCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGA...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGTCCGGAGAGCTGGGATaGGATGAGGTCTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: SGSELELAGAPLTVHWQQSGELG*DEVSDF
Trigger: AAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGA...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGACAAACACCTCCTGCTaGAAGGGTGAGGTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPTNTSC*KGEVVD
Trigger: GTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 5 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGG +
Preference number: 5 (lower is better)
Translates to: GLKDATNLGSWEHGASTTRMLRI*APGNMG
Trigger: CCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCT...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAAGCGAAACAGGCTCTaGTCCTGCCTTGTCACGGGA +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPKRNRL*SCLVTG
Trigger: TCCCGTGACAAGGCAGGACAAGAGCCTGTTTCGCTT...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS TCA 90 bp TGGCTTCACCCTTGCACTCGAGCTTGTAGCCAAATGTGTTGGGGCTaGGGTTGTCCTCTTCCTCCTCCTCACAGATGCTGCTCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: WLHPCTRACSQMCWG*GCPLPPPHRCCSPA
Trigger: CGCTGGGGAGCAGCATCTGTGAGGAGGAGGAAGAGGACAACCTCAGCCCCAACACATTTGGCTACAAGCTCGAGTGCAAGGGTGAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 90 bp TCTCAGACTTTATCTCCTGAGAGGAGTGTCCACCATCTGGGGTCTTaGGTGTGCTGGATGTGCTGTCACATCGTGCCCGGCTGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: SQTLSPERSVHHLGS*VCWMCCHIVPGCRP
Trigger: AGGGCGACAGCCGGGCACGATGTGACAGCACATCCAGCACACCCAAGACCCCAGATGGTGGACACTCCTCTCAGGAGATAAAGTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTGCTCCCCAGCGATGTaGGGGTGCCCACGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: TGAIAPNFIRMASRMLRICSPAM*GCPRSP
Trigger: CGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCA...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTCTGCTTCCTCGCACTaGACGGACAGGATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPSASSH*TDRIKF
Trigger: GAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAGA...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCTGTCCCGGAATGTaGTGTACACTGATTCCACCC +
Preference number: 5 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVPCPGM*CTLIPP
Trigger: GGGTGGAATCAGTGTACACAACATTCCGGGACAGGG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCCCTGTCCCGGAATGTaGTGTACACTGATTCCACCC +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVPCPGM*CTLIPP
Trigger: GGGTGGAATCAGTGTACACAACATTCCGGGACAGGG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGCGGCGTGTTTTCCTCTaGGAAGATGATGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPRRVFL*EDDGHD
Trigger: ATCGTGGCCATCATCTTCCAAGAGGAAAACACGCCG...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAATCCGGTCCTCCAGCTTaGCAAACTTGTCCGACTTGC +
Preference number: 5 (lower is better)
Translates to: AIIRRNRVGPKVPASVQESGPPA*QTCPTC
Trigger: GCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGA...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATCCGGTCCTCCAGCTTaGCAAACTTGTCCGACTTGC +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRSGPPA*QTCPTC
Trigger: GCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGA...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GGGGAACACCCAAAACAGGAGAGAGCTGCACGCATGCTAAGGAGCAGGAAGCGGCCTCCATTCTCAAACTaGTCCTCCTCTGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: GEHPKQERAARMLRSRKRPPFSN*SSSGPS
Trigger: ACTGGGCCCAGAGGAGGACAAGTTTGAGAATGGAGG...CCGCTTCCTGCTCCTTAGCATGCGTGCAGCTCTCTCCTGTTTTGGGTGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGAGCCCCGAGCGTCGCTaGATGGGACTCCGTGACTGG +
Preference number: 5 (lower is better)
Translates to: QMGKAFSTEADRRFRAPESPERR*MGLRDW
Trigger: CCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCT...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTCCGGAGAGCTGGGATaGGATGAGGTCTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: PGSKACHVQEGTALWPRPSGELG*DEVSDF
Trigger: AAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGA...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGTCCGGAGAGCTGGGATaGGATGAGGTCTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPSGELG*DEVSDF
Trigger: AAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGA...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCAAGGGCTTCTCCTTGTaGGGGCAGATTTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVKGFSL*GQISGE
Trigger: CTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCTT...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 5 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGG +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVRMLRI*APGNMG
Trigger: CCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCAAGGTAGTGTTTGAGTaGGCACCTGGCAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVKVVFE*APGRVR
Trigger: CCTGACCCTGCCAGGTGCCAACTCAAACACTACCTT...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCAGGGCTCTGCTGCCCTaGGCCCTAGTGGGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIRALLP*ALVGLV
Trigger: GACAAGCCCCACTAGGGCCAAGGGCAGCAGAGCCCT...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGCTTGCCAGCATGGTCTaGTCGATCCTGGAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVLASMV*SILEGD
Trigger: GTCTCCCTCCAGGATCGACAAGACCATGCTGGCAAG...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637138.1
CDS-3UTR CAA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCCTTGCCAGCATGGTCTaGTCGATCCATCCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRLASMV*SIHPKP
Trigger: GGGCTTCGGATGGATCGACAAGACCATGCTGGCAAG...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AAAGTCCCCGCCTCAGTCCAGGAAGTGTGCAGCGCAGTTCTGGCCCGTCCAGCTTTCTGCTCTTCAAGCTaGATCCCCTGCATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: KVPASVQEVCSAVLARPAFCSSS*IPCIFS
Trigger: GGAGAAAATGCAGGGGATCAAGCTTGAAGAGCAGAA...AGCTGGACGGGCCAGAACTGCGCTGCACACTTCCTGGACTGAGGCGGGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTGTGTTGGGGCTGAGGTaGTCCTCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: IRMASRMLRILAPGNMGPVLGLR*SSSSSS
Trigger: TGAGGAGGAGGAAGAGGACAACCTCAGCCCCAACAC...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGGGGGGTGTTGGGGCTGAGGTaGTCCTCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KAFSTEADRRFRAPELRGVLGLR*SSSSSS
Trigger: TGAGGAGGAGGAAGAGGACAACCTCAGCCCCAACAC...CCCCCGTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGTCTGCTTCCTCGCACTaGACGGACAGGATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVSASSH*TDRIKF
Trigger: GAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAGA...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGATGTACCGTCTTCAGTTaGGACCTAAGGATGACCCGG +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRCTVFS*DLRMTR
Trigger: CCGGGTCATCCTTAGGTCCAAACTGAAGACGGTACA...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGGAGGAACCTGAGGAAGGAGGCCTCGTCCAGAGATGGGAGGGGCTGGGAGGGGGTCTGCCTGGCTTTTaGATAAATGACTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: QEEPEEGGLVQRWEGLGGGLPGF*INDSEF
Trigger: AAATTCGGAGTCATTTATCAAAAAGCCAGGCAGACC...CCCTCCCAGCCCCTCCCATCTCTGGACGAGGCCTCCTTCCTCAGGTTCCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACGTGACCTCCATGCTGTaGTGGGAGATGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: WERRSAQKQIDGLELQSYVTSML*WEMPPL
Trigger: CAGCGGGGGCATCTCCCACAACAGCATGGAGGTCAC...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGTGACCTCCATGCTGTaGTGGGAGATGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQVTSML*WEMPPL
Trigger: CAGCGGGGGCATCTCCCACAACAGCATGGAGGTCAC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGACTGGTTCTTCACCGTaGCCGCCACCACTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: QMGKAFSTEADRRFRAPETGSSP*PPPLEA
Trigger: CGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGT...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAAGCCCCGAGCGTCGCTaGATGGGACTCCGTGACTGG +
Preference number: 5 (lower is better)
Translates to: MGKAFSTEADRRFRAPELSPERR*MGLRDW
Trigger: CCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAATCCGGAGAGCTGGGATaGGATGAGGTCTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: AIIRRNRVGPKVPASVQESGELG*DEVSDF
Trigger: AAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGA...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGTCCGGAGAGCTGGGATaGGATGAGGTCTCAGACTTT +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVSGELG*DEVSDF
Trigger: AAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGA...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGATGAAGGGCTTCTCCTaGTTGGGGCAGATTTCCGGA +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVMKGFS*LGQISG
Trigger: TCCGGAAATCTGCCCCAACAAGGAGAAGCCCTTCAT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAATGAAGGGCTTCTCCTaGTTGGGGCAGATTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PQGCYESWLLGTWGLHHRMKGFS*LGQISG
Trigger: TCCGGAAATCTGCCCCAACAAGGAGAAGCCCTTCAT...TCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCTGGCATGGCTGAGCTaGTCAAAGCGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVLAWLS*SKRNFR
Trigger: CCTGAAATTCCGCTTTGACAAGCTCAGCCATGCCAG...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: MGKAFSTEADRRFRAPELALALS*NWLEPR
Trigger: GCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGC...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCATAACGACGTCTTCCTaGAACCCCCATTGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: PGSKACHVQEGTALWPRPITTSS*NPHCQQ
Trigger: CTGCTGACAATGGGGGTTCAAGGAAGACGTCGTTAT...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAATTCAGCTGGAAATCCTaGTCATTGGTCGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: AIIRRNRVGPKVPASVQEFSWKS*SLVVGQ
Trigger: CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAA...TTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GGGGGTGGCATGTGGGTCACAGGGTCTGACCCACACCCAGATGGGGTCCAGGTTTTAAAGAAATGCAGTTaGACCTTGCCAGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GGGMWVTGSDPHPDGVQVLKKCS*TLPVPP
Trigger: TGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAA...AACCTGGACCCCATCTGGGTGTGGGTCAGACCCTGTGACCCACATGCCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp TCTGGCTCTGAGCTTGAACTGGCTGGAGCCCCGCTCACGGTACACTGGCAGCAGTCCCTCCTCGTTTTCTaGGTTCAAGCTGCATCCAAA +
Preference number: 5 (lower is better)
Translates to: SGSELELAGAPLTVHWQQSLLVF*VQAASK
Trigger: TTTGGATGCAGCTTGAACCAAGAAAACGAGGAGGGA...CTGCTGCCAGTGTACCGTGAGCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTTCCGGCCAAACATGGTaGTGGCTGCAGAGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: AIAPNFIRMASRMLRILASGQTW*WLQSPG
Trigger: CCCCGGGCTCTGCAGCCACAACCATGTTTGGCCGGA...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGTTCTGCTCTTCAAGCTaGATCCCCTGCATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPFCSSS*IPCIFS
Trigger: GGAGAAAATGCAGGGGATCAAGCTTGAAGAGCAGAA...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCATCACAGAAAGCCTTaGCAATCTGAGGGACACTGG +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVHHRKP*QSEGHW
Trigger: CCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGATG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGATAGGACACAATCATTaGGGAGGCCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVIGHNH*GGLGVQ
Trigger: CTGTACCCCAAGGCCTCCCAAATGATTGTGTCCTAT...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCAGGTGCCCAGCCAGTGTCACTCTGCAGCCCCGTCTGCACTGAAAGGGGCTCTGGTCTGCCTGGCTTTTaGATAAATGACTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: AGAQPVSLCSPVCTERGSGLPGF*INDSEF
Trigger: AAATTCGGAGTCATTTATCAAAAAGCCAGGCAGACC...AGAGCCCCTTTCAGTGCAGACGGGGCTGCAGAGTGACACTGGCTGGGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGCCTCCTCGGAAACCTTaGAAATCCTGCAGTGTGATC +
Preference number: 5 (lower is better)
Translates to: NQEKPGGTQSPRLSPGSVPPRKP*KSCSVI
Trigger: GATCACACTGCAGGATTTCAAAGGTTTCCGAGGAGG...CACACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTTCGGCATTGGTGAGCTaGGTGAGCAGAAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: IRMASRMLRILAPGNMGPSALVS*VSRNSL
Trigger: CAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGA...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AAAACCCAGGGCCCCAGGAAACGCAGCCACTTATTCAACCAACCATGTAGGCGCTCCAGCTTTGCAAACTaGTCCGACTTGCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: KTQGPRKRSHLFNQPCRRSSFAN*SDLQQA
Trigger: CGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGA...GCGCCTACATGGTTGGTTGAATAAGTGGCTGCGTTTCCTGGGGCCCTGGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAAGCCCCGAGCGTCGCTaGATGGGACTCCGTGACTGG +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTSPERR*MGLRDW
Trigger: CCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCT...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTAAGGGCTTCTCCTTGTaGGGGCAGATTTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: IRMASRMLRILAPGNMGPKGFSL*GQISGE
Trigger: CTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCTT...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDALALS*NWLEPR
Trigger: GCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGCTCTGGCTCTGAGCTaGAACTGGCTGGAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTALALS*NWLEPR
Trigger: GCGGGGCTCCAGCCAGTTCAAGCTCAGAGCCAGAGC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGAAATGCAGTTTGACCTaGCCAGTGCCTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVKCSLT*PVPPEA
Trigger: GGCTTCTGGAGGCACTGGCAAGGTCAAACTGCATTT...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTAAGCGAAACAGGCTCTaGTCCTGCCTTGTCACGGGA +
Preference number: 5 (lower is better)
Translates to: IRMASRMLRILAPGNMGPKRNRL*SCLVTG
Trigger: TCCCGTGACAAGGCAGGACAAGAGCCTGTTTCGCTT...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTGCTGCAGGATCAGGCTaGGCAAACTTTACTGGCCTC +
Preference number: 5 (lower is better)
Translates to: IRMASRMLRILAPGNMGPAAGSG*ANFTGL
Trigger: GAGGCCAGTAAAGTTTGCCAAGCCTGATCCTGCAGC...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS TCA 90 bp GGGCTTCTCCTTGTTGGGGCAGATTTCCGGAGAGCTGGGATTGGATaGGGTCTCAGACTTTATCTCCTGAGAGGAGTGTCCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: GLLLVGADFRRAGIG*GLRLYLLRGVSTIW
Trigger: CCAGATGGTGGACACTCCTCTCAGGAGATAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTTGTACCGTCTTCAGTTaGGACCTAAGGATGACCCGG +
Preference number: 5 (lower is better)
Translates to: IRMASRMLRILAPGNMGPCTVFS*DLRMTR
Trigger: CCGGGTCATCCTTAGGTCCAAACTGAAGACGGTACA...AGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCAGGCGTTCTCGGCATaGGTGAGCTTGGTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SRWERRSAQKQIDGLELQQAFSA*VSLVSR
Trigger: TCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCCAGGCGTTCTCGGCATaGGTGAGCTTGGTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIQAFSA*VSLVSR
Trigger: TCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTG...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGGCAAACTTGTCCGACTaGCAGCAGGCGTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQANLSD*QQAFSA
Trigger: TGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGC...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACGTGACCTCCATGCTGTaGTGGGAGATGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDVTSML*WEMPPL
Trigger: CAGCGGGGGCATCTCCCACAACAGCATGGAGGTCAC...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGGCGAGAAGGTGGTCTaGGTGACCTCCATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEGEKVV*VTSMLL
Trigger: CAACAGCATGGAGGTCACCAAGACCACCTTCTCGCC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCGGGGAGTTTCTGCTTTaGGCATCTGTGGGACTCCGG +
Preference number: 5 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIGEFLL*ASVGLR
Trigger: CCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCCC...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 5 (lower is better)
Translates to: SRWERRSAQKQIDGLELQEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGGAAGAGGGGATTCCCTaGGACAGGCGAAGGACTCCA +
Preference number: 5 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEEEGIP*DRRRTP
Trigger: TGGAGTCCTTCGCCTGTCCAAGGGAATCCCCTCTTC...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGTGGCCAAGACCCTGTAGTATTTATATCTaGGGCACAGGTCCAGATCCC +
Preference number: 5 (lower is better)
Translates to: PGSKACHVQEGTALWPRPCSIYI*GTGPDP
Trigger: GGGATCTGGACCTGTGCCCAAGATATAAATACTACA...GGGTCTTGGCCACAGGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp TTCCTCCCAAAGGGGCACACGGTCCAGCTGAAGGGAGGGAGACATGGGATTGGGACATTACATAGGCAGTaGGGATCTACGAATCACCTC +
Preference number: 5 (lower is better)
Translates to: FLPKGHTVQLKGGRHGIGTLHRQ*GSTNHL
Trigger: GAGGTGATTCGTAGATCCCAACTGCCTATGTAATGT...CCCAATCCCATGTCTCCCTCCCTTCAGCTGGACCGTGTGCCCCTTTGGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS TCA 90 bp CTTTGGTGGGCAGTGGCGTCCAGAGTGCGTGATGGGAGCCGGGGGTaGAGGTCCATATGCCCATTTGTCTTCTGCTTTTTCATAAATCAG +
Preference number: 5 (lower is better)
Translates to: LWWAVASRVRDGSRG*RSICPFVFCFFINQ
Trigger: CTGATTTATGAAAAAGCAGAAGACAAATGGGCATATGGACCTTCACCCCCGGCTCCCATCACGCACTCTGGACGCCACTGCCCACCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS-3UTR CAA 90 bp GGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGTCTGCCTGGCTTTTaGATAAATGACTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: GLKDATNLGSWEHGASTTGLPGF*INDSEF
Trigger: AAATTCGGAGTCATTTATCAAAAAGCCAGGCAGACC...GGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGGGTCTGCCTGGCTTTTaGATAAATGACTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: ASRMLRILAPGNMGPPPPGLPGF*INDSEF
Trigger: AAATTCGGAGTCATTTATCAAAAAGCCAGGCAGACC...CGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCCCTGTCCCGGAATGTaGTGTACACTGATTCCACCC +
Preference number: 5 (lower is better)
Translates to: SRWERRSAQKQIDGLELQPCPGM*CTLIPP
Trigger: GGGTGGAATCAGTGTACACAACATTCCGGGACAGGG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGTCCGGTCCTCCAGCTTaGCAAACTTGTCCGACTTGC +
Preference number: 5 (lower is better)
Translates to: QMGKAFSTEADRRFRAPESGPPA*QTCPTC
Trigger: GCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGA...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp TGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTACCCTCCATTCTCAAACTaGTCCTCCTCTGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: WERRSAQKQIDGLELQSYPPFSN*SSSGPS
Trigger: ACTGGGCCCAGAGGAGGACAAGTTTGAGAATGGAGG...GTAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGGGCGAGAAGGTGGTCTaGGTGACCTCCATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQGEKVV*VTSMLL
Trigger: CAACAGCATGGAGGTCACCAAGACCACCTTCTCGCC...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGAGGATGCTACGAATCTaGGCTCCTGGGAACATGGGG +
Preference number: 5 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQRMLRI*APGNMG
Trigger: CCCCATGTTCCCAGGAGCCAAGATTCGTAGCATCCT...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGTGGCTTCCCACCCCTTaGTGGGAAAATATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVWLPTP*WENIFS
Trigger: TGAGAAGATATTTTCCCACAAAGGGGTGGGAAGCCA...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ATGCTACGAATCTTGGCTCCTGGGAACATGGGGCCTCCACCACCGAGTGCGTTCTTAAAGAAATGCAGTTaGACCTTGCCAGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: MLRILAPGNMGPPPPSAFLKKCS*TLPVPP
Trigger: TGGAGGCACTGGCAAGGTCAAACTGCATTTCTTTAA...GAACGCACTCGGTGGTGGAGGCCCCATGTTCCCAGGAGCCAAGATTCGTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAGGTTTGGGCAAATCTTaGAGCCCCAAGACTGGGCGC +
Preference number: 5 (lower is better)
Translates to: MGKAFSTEADRRFRAPELGLGKS*SPKTGR
Trigger: GCGCCCAGTCTTGGGGCTCAAAGATTTGCCCAAACC...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CCACCGAGTGCGTTCCTGGTAGTAAAGCCTGCCACGTTCAGGAAGGCACTGCCCTGGACGATGACATGGTaGGATGAGATGCTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: PPSAFLVVKPATFRKALPWTMTW*DEMLKR
Trigger: TCTTTTTAGCATCTCATCCAACCATGTCATCGTCCA...GGGCAGTGCCTTCCTGAACGTGGCAGGCTTTACTACCAGGAACGCACTCGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GTCGTCACATGGAGCATCACTTCCAAGCCACAGTTCTTAGGTTCGACCACACAGAAGGTAGTGTTTGAGTaGGCACCTGGCAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: VVTWSITSKPQFLGSTTQKVVFE*APGRVR
Trigger: CCTGACCCTGCCAGGTGCCAACTCAAACACTACCTT...CTGTGTGGTCGAACCTAAGAACTGTGGCTTGGAAGTGATGCTCCATGTGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp TCCCCTCACCCCACAGCAGCCATAATCAGGAGAAACCGGGTGGGACCCAAAGTCACATTACATAGGCAGTaGGGATCTACGAATCACCTC +
Preference number: 5 (lower is better)
Translates to: SPHPTAAIIRRNRVGPKVTLHRQ*GSTNHL
Trigger: GAGGTGATTCGTAGATCCCAACTGCCTATGTAATGT...GACTTTGGGTCCCACCCGGTTTCTCCTGATTATGGCTGCTGTGGGGTGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS GCA 90 bp CATCATCACAGAAAGCCTTTGCAATCTGAGGGACACTGGGAAGCTTaGTCAGTCCAGCCAAGGGGATCCGCTCATGTACCGTCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: HHHRKPLQSEGHWEA*SVQPRGSAHVPSSV
Trigger: AACTGAAGACGGTACATGAGCGGATCCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 90 bp TGCCTGGGGTCTCGACCTGCACGACGATGTAGGCATGTAAGAAATTaGAGGCTATCATGTCTGGGACAAACGGCGTGTTTTCCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: CLGSRPARRCRHVRN*RLSCLGQTACFPLG
Trigger: TCCAAGAGGAAAACACGCCGTTTGTCCCAGACATGATAGCCTCCAATTTCTTACATGCCTACATCGTCGTGCAGGTCGAGACCCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000574515.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGCCAGCTCCTGCTTCTaGACCTTCAGACTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: AIAPNFIRMASRMLRILAASSCF*TFRLAS
Trigger: GCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGCCAGCTCCTGCTTCTaGACCTTCAGACTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTASSCF*TFRLAS
Trigger: GCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGTGTTGGGGCTGAGGTaGTCCTCTTCCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTVLGLR*SSSSSS
Trigger: TGAGGAGGAGGAAGAGGACAACCTCAGCCCCAACAC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTGTACCGTCTTCAGTTaGGACCTAAGGATGACCCGG +
Preference number: 5 (lower is better)
Translates to: TGAIAPNFIRMASRMLRICTVFS*DLRMTR
Trigger: CCGGGTCATCCTTAGGTCCAAACTGAAGACGGTACA...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTGTACCGTCTTCAGTTaGGACCTAAGGATGACCCGG +
Preference number: 5 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQCTVFS*DLRMTR
Trigger: CCGGGTCATCCTTAGGTCCAAACTGAAGACGGTACA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACACAGGCGTTCTCGGCATaGGTGAGCTTGGTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTQAFSA*VSLVSR
Trigger: TCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTG...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCTAAAGGGCTTCTCCTTGTaGGGGCAGATTTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: MGKAFSTEADRRFRAPELKGFSL*GQISGE
Trigger: CTCTCCGGAAATCTGCCCCAACAAGGAGAAGCCCTT...TAGCTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACAGGGGAGTTTCTGCTTTaGGCATCTGTGGGACTCCGG +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTGEFLL*ASVGLR
Trigger: CCGGAGTCCCACAGATGCCAAAAGCAGAAACTCCCC...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAGGCTCTTGTCCTGCCTaGTCACGGGAGCCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITGSCPA*SREPEF
Trigger: AAACTCAGGCTCCCGTGACAAGGCAGGACAAGAGCC...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS TCA 90 bp TTACTTCTCCTTGTTGGGGCAGATTTCCGGAGAGCTGGGATTGGATaGGGTCTCAGACTTTATCTCCTGAGAGGAGTGTCCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: LLLLVGADFRRAGIG*GLRLYLLRGVSTIW
Trigger: CCAGATGGTGGACACTCCTCTCAGGAGATAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCTGCCCCAACAAGGAGAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575979.1
CDS CCA 90 bp CCTCACTCTCTTACTTCTCCTTGTTGGGGCAGATTTCCGGAGAGCTaGGATTGGATGAGGTCTCAGACTTTATCTCCTGAGAGGAGTGTC +
Preference number: 5 (lower is better)
Translates to: PHSLTSPCWGRFPES*DWMRSQTLSPERSV
Trigger: GACACTCCTCTCAGGAGATAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCTGCCCCAACAAGGAGAAGTAAGAGAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575979.1
CDS-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCCATCACAGAAAGCCTTaGCAATCTGAGGGACACTGG +
Preference number: 5 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIHHRKP*QSEGHW
Trigger: CCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGATG...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGGGGTACAGGACAGGATaGAATCTCAGTCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMGYRTG*NLSPTA
Trigger: TGCAGTGGGACTGAGATTCAATCCTGTCCTGTACCC...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp ACGGGGGCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCATAGGACACAATCATTaGGGAGGCCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: TGAIAPNFIRMASRMLRIIGHNH*GGLGVQ
Trigger: CTGTACCCCAAGGCCTCCCAAATGATTGTGTCCTAT...GATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ATAATCAGGAGAAACCGGGTGGGACCCAAAGTCCCCGCCTCAGTCCAGGAAGTGGGTCTGCCTGGCTTTTaGATAAATGACTCCGAATTT +
Preference number: 5 (lower is better)
Translates to: IIRRNRVGPKVPASVQEVGLPGF*INDSEF
Trigger: AAATTCGGAGTCATTTATCAAAAAGCCAGGCAGACC...CACTTCCTGGACTGAGGCGGGGACTTTGGGTCCCACCCGGTTTCTCCTGATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTCCTCCTCGGAAACCTTaGAAATCCTGCAGTGTGATC +
Preference number: 5 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIPPRKP*KSCSVI
Trigger: GATCACACTGCAGGATTTCAAAGGTTTCCGAGGAGG...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGAGCCTCCTCGGAAACCTTaGAAATCCTGCAGTGTGATC +
Preference number: 5 (lower is better)
Translates to: QMGKAFSTEADRRFRAPEPPRKP*KSCSVI
Trigger: GATCACACTGCAGGATTTCAAAGGTTTCCGAGGAGG...CTCTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGCCTCCTCGGAAACCTTaGAAATCCTGCAGTGTGATC +
Preference number: 5 (lower is better)
Translates to: SRWERRSAQKQIDGLELQPPRKP*KSCSVI
Trigger: GATCACACTGCAGGATTTCAAAGGTTTCCGAGGAGG...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACACCCTGTCCCGGAATGTaGTGTACACTGATTCCACCC +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTPCPGM*CTLIPP
Trigger: GGGTGGAATCAGTGTACACAACATTCCGGGACAGGG...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp ACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTCTCATCTGGACGATGCGGCGTGTTTTCCTCTaGGAAGATGATGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: TSSKLLPSPGLRFLIWTMRRVFL*EDDGHD
Trigger: ATCGTGGCCATCATCTTCCAAGAGGAAAACACGCCG...CATCGTCCAGATGAGAAATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATCGGCATTGGTGAGCTaGGTGAGCAGAAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTSALVS*VSRNSL
Trigger: CAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGCAAACTTGTCCGACTaGCAGCAGGCGTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHANLSD*QQAFSA
Trigger: TGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACATCCAGCTTTGCAAACTaGTCCGACTTGCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITSSFAN*SDLQQA
Trigger: CGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGA...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGCGAGAAGGTGGTCTaGGTGACCTCCATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHGEKVV*VTSMLL
Trigger: CAACAGCATGGAGGTCACCAAGACCACCTTCTCGCC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp CTCCTCGTTTTCTTGGTTCAAGCTGCATCCAAAGCCCAAGGGTCCTCACTGAAAATGAAGGGCTTCTCCTaGTTGGGGCAGATTTCCGGA +
Preference number: 5 (lower is better)
Translates to: LLVFLVQAASKAQGSSLKMKGFS*LGQISG
Trigger: TCCGGAAATCTGCCCCAACAAGGAGAAGCCCTTCAT...TTTCAGTGAGGACCCTTGGGCTTTGGATGCAGCTTGAACCAAGAAAACGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGTCAGCACTGGCTCCTTaGCTCTCCCTGAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQSALAP*LSLNSF
Trigger: GAAGGAATTCAGGGAGAGCAAAGGAGCCAGTGCTGA...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGATAACGACGTCTTCCTaGAACCCCCATTGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SRWERRSAQKQIDGLELQITTSS*NPHCQQ
Trigger: CTGCTGACAATGGGGGTTCAAGGAAGACGTCGTTAT...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTTACTGGCCTCCCCTaGCCTCGATACAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: RILSGWPQGCYESWLLGTFTGLP*PRYRVA
Trigger: AGCTACCCTGTATCGAGGCAAGGGGAGGCCAGTAAA...TGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AGCTTTTCTGCACCTGTTTTTAAGCGTCAACTGAGCTGGAGGCATATGGGTGACTTTACTGGCCTCCCCTaGCCTCGATACAGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SFSAPVFKRQLSWRHMGDFTGLP*PRYRVA
Trigger: AGCTACCCTGTATCGAGGCAAGGGGAGGCCAGTAAA...GTCACCCATATGCCTCCAGCTCAGTTGACGCTTAAAAACAGGTGCAGAAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTGCTGCAGGATCAGGCTaGGCAAACTTTACTGGCCTC +
Preference number: 5 (lower is better)
Translates to: AIAPNFIRMASRMLRILAAAGSG*ANFTGL
Trigger: GAGGCCAGTAAAGTTTGCCAAGCCTGATCCTGCAGC...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS CCA 90 bp TCTCTTACTTCTCCTTGTTGGGGCAGATTTCCGGAGAGCTGGGATTaGATGAGGTCTCAGACTTTATCTCCTGAGAGGAGTGTCCACCAT +
Preference number: 5 (lower is better)
Translates to: SLTSPCWGRFPESWD*MRSQTLSPERSVHH
Trigger: ATGGTGGACACTCCTCTCAGGAGATAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCTGCCCCAACAAGGAGAAGTAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575979.1
CDS-3UTR CAA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTTCTGCTCTTCAAGCTaGATCCCCTGCATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQFCSSS*IPCIFS
Trigger: GGAGAAAATGCAGGGGATCAAGCTTGAAGAGCAGAA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGCAGATGGGAAAGGCGTTCAGCACAGAAGCAGATAGACGGTTTAGAGCTCCAGTTCTGCTCTTCAAGCTaGATCCCCTGCATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SRWERRSAQKQIDGLELQFCSSS*IPCIFS
Trigger: GGAGAAAATGCAGGGGATCAAGCTTGAAGAGCAGAA...CTGGAGCTCTAAACCGTCTATCTGCTTCTGTGCTGAACGCCTTTCCCATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATTCCAGCTTTGCAAACTaGTCCGACTTGCAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHSSFAN*SDLQQA
Trigger: CGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGA...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTATGAAGGGCTTCTCCTaGTTGGGGCAGATTTCCGGA +
Preference number: 5 (lower is better)
Translates to: AIAPNFIRMASRMLRILAMKGFS*LGQISG
Trigger: TCCGGAAATCTGCCCCAACAAGGAGAAGCCCTTCAT...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATACAAACACCTCCTGCTaGAAGGGTGAGGTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHTNTSC*KGEVVD
Trigger: GTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGT...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AGGATGAATAGGATGATAAAGGACCCGGACATCACACTGGGAGGTCAGGAGCAGTGGCTTCCCACCCCTTaGTGGGAAAATATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RMNRMIKDPDITLGGQEQWLPTP*WENIFS
Trigger: TGAGAAGATATTTTCCCACAAAGGGGTGGGAAGCCA...CTGCTCCTGACCTCCCAGTGTGATGTCCGGGTCCTTTATCATCCTATTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CCGACACTTTTCCTCTCCAGGATGAATAGGATGATAAAGGACCCGGACATCACAAAATGCAGTTTGACCTaGCCAGTGCCTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PTLFLSRMNRMIKDPDITKCSLT*PVPPEA
Trigger: GGCTTCTGGAGGCACTGGCAAGGTCAAACTGCATTT...TGTGATGTCCGGGTCCTTTATCATCCTATTCATCCTGGAGAGGAAAAGTGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATGGGTACAGGACAGGATaGAATCTCAGTCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHGYRTG*NLSPTA
Trigger: TGCAGTGGGACTGAGATTCAATCCTGTCCTGTACCC...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTATAGGACACAATCATTaGGGAGGCCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: AIAPNFIRMASRMLRILAIGHNH*GGLGVQ
Trigger: CTGTACCCCAAGGCCTCCCAAATGATTGTGTCCTAT...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp GCAATAGCGCCGAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTCCTCGGAAACCTTaGAAATCCTGCAGTGTGATC +
Preference number: 5 (lower is better)
Translates to: AIAPNFIRMASRMLRILAPPRKP*KSCSVI
Trigger: GATCACACTGCAGGATTTCAAAGGTTTCCGAGGAGG...AGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTCGGCGCTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AAAACATCCCCTCGTGGAGATCACAGTGGAAATGCCTCAAACACCAGCGTGAGCTGTAGTATTTATATCTaGGGCACAGGTCCAGATCCC +
Preference number: 5 (lower is better)
Translates to: KTSPRGDHSGNASNTSVSCSIYI*GTGPDP
Trigger: GGGATCTGGACCTGTGCCCAAGATATAAATACTACA...GCTCACGCTGGTGTTTGAGGCATTTCCACTGTGATCTCCACGAGGGGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp CCCTATGGGAATAAAGCATTCAGCTGGAAATCCTTGTCATTGGTCGTGGGGCAGTCCCTCCTCGTTTTCTaGGTTCAAGCTGCATCCAAA +
Preference number: 5 (lower is better)
Translates to: PYGNKAFSWKSLSLVVGQSLLVF*VQAASK
Trigger: TTTGGATGCAGCTTGAACCAAGAAAACGAGGAGGGA...CTGCCCCACGACCAATGACAAGGATTTCCAGCTGAATGCTTTATTCCCATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCGTCGCATCCGAGCTGTaGGCCAGCTCCTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIVASEL*ASSCFL
Trigger: CAAGAAGCAGGAGCTGGCCAACAGCTCGGATGCGAC...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp GAATTTTATCAGGATGGCCTCAAGGATGCTACGAATCTTGGCTCCTGGGAACATCATCACAGAAAGCCTTaGCAATCTGAGGGACACTGG +
Preference number: 5 (lower is better)
Translates to: EFYQDGLKDATNLGSWEHHHRKP*QSEGHW
Trigger: CCAGTGTCCCTCAGATTGCAAAGGCTTTCTGTGATG...ATGTTCCCAGGAGCCAAGATTCGTAGCATCCTTGAGGCCATCCTGATAAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS-3UTR CAA 90 bp AACAGCCAGCTGTGTGACCTCAAGCAAGTTACTCCCCTCACCTGGGCTAAGATTTGGACGATGACATGGTaGGATGAGATGCTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: NSQLCDLKQVTPLTWAKIWTMTW*DEMLKR
Trigger: TCTTTTTAGCATCTCATCCAACCATGTCATCGTCCA...AATCTTAGCCCAGGTGAGGGGAGTAACTTGCTTGAGGTCACACAGCTGGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCTCTGCTTCCTCGCACTaGACGGACAGGATCAAGTTC +
Preference number: 5 (lower is better)
Translates to: NVILHDWHRQTLSLRPSISASSH*TDRIKF
Trigger: GAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAGA...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCATGAAGGGCTTCTCCTaGTTGGGGCAGATTTCCGGA +
Preference number: 5 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIMKGFS*LGQISG
Trigger: TCCGGAAATCTGCCCCAACAAGGAGAAGCCCTTCAT...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS-3UTR CAA 90 bp AACGTCATTTTACATGATTGGCATAGACAGACACTCTCATTAAGACCTTCCATCGAGCTCCTCTCCAGCTaGCAAACAGGACTCAATCAT +
Preference number: 5 (lower is better)
Translates to: NVILHDWHRQTLSLRPSIELLSS*QTGLNH
Trigger: ATGATTGAGTCCTGTTTGCAAGCTGGAGAGGAGCTC...GATGGAAGGTCTTAATGAGAGTGTCTGTCTATGCCAATCATGTAAAATGACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254695.13
ENST00000366401.8
CDS GCA 72 bp CGGAACCGCCCTTCCTGCACGTACCAGCGCACCAGCTaGCAGCGCTTCTCCCCCGGCGCCCGGCGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: RNRPSCTYQRTS*QRFSPGARRPA
Trigger: GGCGGGCCGCCGGGCGCCGGGGGAGAAGCGCTGGCAGCTGGTGCGCTGGTACGTGCAGGAAGGGCGGTTCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637138.1
CDS GCA 72 bp CGTGCCCGGCTGTCGCCCTGGCCTTCTGAGCCCGTGTaGAGGCGGGGGAAGAGCCCCGAGCGTCGCTTGATG +
Preference number: 6 (lower is better)
Translates to: RARLSPWPSEPV*RRGKSPERRLM
Trigger: CATCAAGCGACGCTCGGGGCTCTTCCCCCGCCTGCACACGGGCTCAGAAGGCCAGGGCGACAGCCGGGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 72 bp GGGAGGTGCCGTGAGAGGAGGGGAGAGCGGCCGGTCTaGGAGGGTCGCATCCGAGCTGTTGGCCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GRCRERRGERPV*EGRIRAVGQLL
Trigger: CAGGAGCTGGCCAACAGCTCGGATGCGACCCTCCCAGACCGGCCGCTCTCCCCTCCTCTCACGGCACCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 72 bp TCACCCCACCTCCCCAGCACAGCCTGTGACGCCGGATaGCTCCTCCGGAACGCAGTACCGGCTCGCGCCGTC +
Preference number: 6 (lower is better)
Translates to: SPHLPSTACDAG*LLRNAVPARAV
Trigger: GACGGCGCGAGCCGGTACTGCGTTCCGGAGGAGCCATCCGGCGTCACAGGCTGTGCTGGGGAGGTGGGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS TCA 72 bp CCGTGTGCAGGCGGGGGAAGAGCCCCGAGCGTCGCTTaGTGGGACTCCGTGACTGGTTCTTCACCGTTGCCG +
Preference number: 6 (lower is better)
Translates to: PCAGGGRAPSVA*WDSVTGSSPLP
Trigger: CGGCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCTCTTCCCCCGCCTGCACACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS GCA 72 bp TCACGCACGCACACACACCCTATAGGTGGACGTGTGTaGAGCGCCCCGCCCGCGGGGGTTTCTGAGGACGGT +
Preference number: 6 (lower is better)
Translates to: SRTHTHPIGGRV*SAPPAGVSEDG
Trigger: ACCGTCCTCAGAAACCCCCGCGGGCGGGGCGCTGCACACACGTCCACCTATAGGGTGTGTGTGCGTGCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS CCA 72 bp TGCCCCCACTGTGCGACTTCTTCTGGCCGCCCACCATaGTCTCCATGGAGTGGCTGCGTACGCGGATGGCCC +
Preference number: 6 (lower is better)
Translates to: CPHCATSSGRPP*SPWSGCVRGWP
Trigger: GGGCCATCCGCGTACGCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAGTGGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS TCA 72 bp GGGGAAGAGCCCCGAGCGTCGCTTGATGGGACTCCGTaGCTGGTTCTTCACCGTTGCCGCCACCACTGGAGG +
Preference number: 6 (lower is better)
Translates to: GEEPRASLDGTP*LVLHRCRHHWR
Trigger: CCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCTCTTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS TCA 72 bp GGACGGGCTGTAGACAAACACCTCCTGCTTGAAGGGTaGGGTCGTGGACGGCTGGCTGCCCCCACTGTCGCC +
Preference number: 6 (lower is better)
Translates to: GRAVDKHLLLEG*GRGRLAAPTVA
Trigger: GGCGACAGTGGGGGCAGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGTCTACAGCCCGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS TCA 72 bp TGCTCGGGGACGGGCTGTAGACAAACACCTCCTGCTTaGAGGGTGAGGTCGTGGACGGCTGGCTGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: CSGTGCRQTPPA*RVRSWTAGCPH
Trigger: GTGGGGGCAGCCAGCCGTCCACGACCTCACCCTTCAAGCAGGAGGTGTTTGTCTACAGCCCGTCCCCGAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS GCA 72 bp GGAGACACTGCGCTTCCGGCCAAACATGGTTGTGGCTaGAGAGCCCGGGGTCCCAGCGATGTCCCAACGACG +
Preference number: 6 (lower is better)
Translates to: GDTALPAKHGCG*RARGPSDVPTT
Trigger: CGTCGTTGGGACATCGCTGGGACCCCGGGCTCTGCAGCCACAACCATGTTTGGCCGGAAGCGCAGTGTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS GCA 72 bp GTCAGCGTCCTCTCCTCGATTCGGAACCGCCCTTCCTaGACGTACCAGCGCACCAGCTGCCAGCGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VSVLSSIRNRPS*TYQRTSCQRFS
Trigger: GGAGAAGCGCTGGCAGCTGGTGCGCTGGTACGTGCAGGAAGGGCGGTTCCGAATCGAGGAGAGGACGCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637138.1
CDS CCA 72 bp AGGCTGCCAGGGATGCCCCCACTGTGCGACTTCTTCTaGCCGCCCACCATGGTCTCCATGGAGTGGCTGCGT +
Preference number: 6 (lower is better)
Translates to: RLPGMPPLCDFF*PPTMVSMEWLR
Trigger: ACGCAGCCACTCCATGGAGACCATGGTGGGCGGCCAGAAGAAGTCGCACAGTGGGGGCATCCCTGGCAGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 72 bp GGCCAGGAGGCAGAGGGCGTGTTCCAGGGCTCCACGTaGCCGAAGCTGGCCTTTCCCACCCTCACTCTCTTA +
Preference number: 6 (lower is better)
Translates to: GQEAEGVFQGST*PKLAFPTLTLL
Trigger: TAAGAGAGTGAGGGTGGGAAAGGCCAGCTTCGGCCACGTGGAGCCCTGGAACACGCCCTCTGCCTCCTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575979.1
CDS CCA 72 bp CGAGAAGCTGCGCATAGCCACGGCTTTGGTGGGCAGTaGCGTCCAGAGTGCGTGATGGGAGCCGGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: REAAHSHGFGGQ*RPECVMGAGGE
Trigger: TTCACCCCCGGCTCCCATCACGCACTCTGGACGCCACTGCCCACCAAAGCCGTGGCTATGCGCAGCTTCTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS TCA 72 bp GCCACGGCTTTGGTGGGCAGTGGCGTCCAGAGTGCGTaGTGGGAGCCGGGGGTGAAGGTCCATATGCCCATT +
Preference number: 6 (lower is better)
Translates to: ATALVGSGVQSA*WEPGVKVHMPI
Trigger: AATGGGCATATGGACCTTCACCCCCGGCTCCCATCACGCACTCTGGACGCCACTGCCCACCAAAGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS GCA 72 bp CCTCCTCACAGATGCTGCTCCCCAGCGATGTTGGGGTaGCCACGTTCTCCGGGTCCTCGATCCAATAGCCCC +
Preference number: 6 (lower is better)
Translates to: PPHRCCSPAMLG*PRSPGPRSNSP
Trigger: GGGGCTATTGGATCGAGGACCCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS GCA 72 bp CATAGCCACGGCTTTGGTGGGCAGTGGCGTCCAGAGTaGGTGATGGGAGCCGGGGGTGAAGGTCCATATGCC +
Preference number: 6 (lower is better)
Translates to: HSHGFGGQWRPE*VMGAGGEGPYA
Trigger: GGCATATGGACCTTCACCCCCGGCTCCCATCACGCACTCTGGACGCCACTGCCCACCAAAGCCGTGGCTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS CCA 72 bp AAGAGCCCCGAGCGTCGCTTGATGGGACTCCGTGACTaGTTCTTCACCGTTGCCGCCACCACTGGAGGCGAG +
Preference number: 6 (lower is better)
Translates to: KSPERRLMGLRD*FFTVAATTGGE
Trigger: CTCGCCTCCAGTGGTGGCGGCAACGGTGAAGAACCAGTCACGGAGTCCCATCAAGCGACGCTCGGGGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 72 bp AGGAGGGCACCTGATGTAAGGGTGCCCCACCTTGCGTaGCCCGAGAAGCTGCGCATAGCCACGGCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: RRAPDVRVPHLA*PEKLRIATALV
Trigger: CACCAAAGCCGTGGCTATGCGCAGCTTCTCGGGCCACGCAAGGTGGGGCACCCTTACATCAGGTGCCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS CCA 72 bp GGGAGAAGCCAGGAGGGGATGTCCTTGGAGGTGAGCTaGCTGTCCCAGCAAGGGGGCTCTCTCTCCTCGAGT +
Preference number: 6 (lower is better)
Translates to: GRSQEGMSLEVS*LSQQGGSLSSS
Trigger: ACTCGAGGAGAGAGAGCCCCCTTGCTGGGACAGCCAGCTCACCTCCAAGGACATCCCCTCCTGGCTTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574709.1
CDS CAA 72 bp ACCGTTGCCGCCACCACTGGAGGCGAGAAGGTGGTCTaGGTGACCTCCATGCTGTTGTGGGAGATGCCCCCG +
Preference number: 6 (lower is better)
Translates to: TVAATTGGEKVV*VTSMLLWEMPP
Trigger: CGGGGGCATCTCCCACAACAGCATGGAGGTCACCAAGACCACCTTCTCGCCTCCAGTGGTGGCGGCAACGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS GCA 72 bp CCTGAGAGGAGTGTCCACCATCTGGGGTCTTGGGTGTaGTGGATGTGCTGTCACATCGTGCCCGGCTGTCGC +
Preference number: 6 (lower is better)
Translates to: PERSVHHLGSWV*WMCCHIVPGCR
Trigger: GCGACAGCCGGGCACGATGTGACAGCACATCCAGCACACCCAAGACCCCAGATGGTGGACACTCCTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 72 bp GAGAGGAGTGTCCACCATCTGGGGTCTTGGGTGTGCTaGATGTGCTGTCACATCGTGCCCGGCTGTCGCCCT +
Preference number: 6 (lower is better)
Translates to: ERSVHHLGSWVC*MCCHIVPGCRP
Trigger: AGGGCGACAGCCGGGCACGATGTGACAGCACATCCAGCACACCCAAGACCCCAGATGGTGGACACTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 72 bp ACGTCGGGAGCAAGGGGTGGGGAACACGCCTGCCCATaGCTACAGCTCACTGGATACACTCAGGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: TSGARGGEHACP*LQLTGYTQEQE
Trigger: CTCCTGCTCCTGAGTGTATCCAGTGAGCTGTAGCCATGGGCAGGCGTGTTCCCCACCCCTTGCTCCCGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS TCA 72 bp CAGCTCACTGGATACACTCAGGAGCAGGAGGGCACCTaGTGTAAGGGTGCCCCACCTTGCGTGGCCCGAGAA +
Preference number: 6 (lower is better)
Translates to: QLTGYTQEQEGT*CKGAPPCVARE
Trigger: TTCTCGGGCCACGCAAGGTGGGGCACCCTTACATCAGGTGCCCTCCTGCTCCTGAGTGTATCCAGTGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571555.1
CDS CAA 72 bp CTTCCTCCTCCTCACAGATGCTGCTCCCCAGCGATGTaGGGGTGCCCACGTTCTCCGGGTCCTCGATCCAAT +
Preference number: 6 (lower is better)
Translates to: LPPPHRCCSPAM*GCPRSPGPRSN
Trigger: ATTGGATCGAGGACCCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CAA 72 bp AGGGCAGCCCTGGTCCGGTCCTCCAGCTTTGCAAACTaGTCCGACTTGCAGCAGGCGTTCTCGGCATTGGTG +
Preference number: 6 (lower is better)
Translates to: RAALVRSSSFAN*SDLQQAFSALV
Trigger: CACCAATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGACCAGGGCTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000574515.1
ENST00000637138.1
CDS CCA 72 bp TTCCTCCTCCTCACAGATGCTGCTCCCCAGCGATGTTaGGGTGCCCACGTTCTCCGGGTCCTCGATCCAATA +
Preference number: 6 (lower is better)
Translates to: FLLLTDAAPQRC*GAHVLRVLDPI
Trigger: TATTGGATCGAGGACCCGGAGAACGTGGGCACCCCAACATCGCTGGGGAGCAGCATCTGTGAGGAGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 72 bp CTGTCCCAGCAAGGGGGCTCTCTCTCCTCGAGTAAGTaGGGAGGGGAGATAACGACGTCTTCCTTGAACCCC +
Preference number: 6 (lower is better)
Translates to: LSQQGGSLSSSK*GGEITTSSLNP
Trigger: GGGGTTCAAGGAAGACGTCGTTATCTCCCCTCCCCACTTACTCGAGGAGAGAGAGCCCCCTTGCTGGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574709.1
CDS CAA 90 bp AGGGCAGCCCTGGTCCGGTCCTCCAGCTTTGCAAACTTGTCCGACTaGCAGCAGGCGTTCTCGGCATTGGTGAGCTTGGTGAGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: RAALVRSSSFANLSD*QQAFSALVSLVSRN
Trigger: GTTTCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGACCAGGGCTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000574515.1
ENST00000637138.1
CDS GCA 72 bp TCTTGTCGATCCATCCGAAGCCCCCAAAGGAGACACTaGGCTTCCGGCCAAACATGGTTGTGGCTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: SCRSIRSPQRRH*ASGQTWLWLQS
Trigger: GCTCTGCAGCCACAACCATGTTTGGCCGGAAGCGCAGTGTCTCCTTTGGGGGCTTCGGATGGATCGACAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS GCA 72 bp GCTGTTGGCCAGCTCCTGCTTCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGATCCATCCGAAGCCCCC +
Preference number: 6 (lower is better)
Translates to: AVGQLLLLDLQT*QHGLVDPSEAP
Trigger: GGGGGCTTCGGATGGATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGCCAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000542807.1
CDS GCA 72 bp GGACCTAAGGATGACCCGGAGGTACTCGATCCCCTCTaGTTCCTCGCACTTGACGGACAGGATCAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: GPKDDPEVLDPL*FLALDGQDQVP
Trigger: GGGAACTTGATCCTGTCCGTCAAGTGCGAGGAAGCAGAGGGGATCGAGTACCTCCGGGTCATCCTTAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS GCA 72 bp GAGTCATGGTACGGACCTTGTAGGATGGGGTCTCTGTaGCTGGGGTCTCGACCTGCACGACGATGTAGGCAT +
Preference number: 6 (lower is better)
Translates to: ESWYGPCRMGSL*LGSRPARRCRH
Trigger: ATGCCTACATCGTCGTGCAGGTCGAGACCCCAGGCACAGAGACCCCATCCTACAAGGTCCGTACCATGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574515.1
CDS CCA 72 bp GCCTCCCTTCTCCACAACCTCGTCGATGCTGGGGTATaGGATATAGTCGTCCTTGTTCTTCTGGGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: ASLLHNLVDAGV*DIVVLVLLGSR
Trigger: CCGGGACCCCAGAAGAACAAGGACGACTATATCCCATACCCCAGCATCGACGAGGTTGTGGAGAAGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254695.13
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 72 bp GATGATCCTTCCCCAGGAAGTGCCTCCGGTAGGCCCTaGCTTCACCCTTGCACTCGAGCTTGTAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: DDPSPGSASGRP*LHPCTRACSQM
Trigger: CATTTGGCTACAAGCTCGAGTGCAAGGGTGAAGCCAGGGCCTACCGGAGGCACTTCCTGGGGAAGGATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CAA 72 bp CTGGTCCGGTCCTCCAGCTTTGCAAACTTGTCCGACTaGCAGCAGGCGTTCTCGGCATTGGTGAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LVRSSSFANLSD*QQAFSALVSLV
Trigger: CACCAAGCTCACCAATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGAGGACCGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000574515.1
ENST00000637138.1
CDS CAA 90 bp CGTGGCCGAAGCTGGCCTTTCCCACCCTCACTCTCTTACTTCTCCTaGTTGGGGCAGATTTCCGGAGAGCTGGGATTGGATGAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: RGRSWPFPPSLSYFS*LGQISGELGLDEVS
Trigger: TGAGACCTCATCCAATCCCAGCTCTCCGGAAATCTGCCCCAACAAGGAGAAGTAAGAGAGTGAGGGTGGGAAAGGCCAGCTTCGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575979.1
CDS GCA 72 bp GCTGTTGGCCAGCTCCTGCTTCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGATCCTGGAGGGAGACTC +
Preference number: 6 (lower is better)
Translates to: AVGQLLLLDLQT*QHGLVDPGGRL
Trigger: GAGTCTCCCTCCAGGATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGCCAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637138.1
CDS CAA 90 bp GCAAACTTGTCCGACTTGCAGCAGGCGTTCTCGGCATTGGTGAGCTaGGTGAGCAGAAACTCCCTGAATTCCGGGCCCTTCTGGAAAACG +
Preference number: 6 (lower is better)
Translates to: ANLSDLQQAFSALVS*VSRNSLNSGPFWKT
Trigger: CGTTTTCCAGAAGGGCCCGGAATTCAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000574515.1
ENST00000637138.1
CDS CAA 90 bp TCCAGCTTTGCAAACTTGTCCGACTTGCAGCAGGCGTTCTCGGCATaGGTGAGCTTGGTGAGCAGAAACTCCCTGAATTCCGGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: SSFANLSDLQQAFSA*VSLVSRNSLNSGPF
Trigger: GAAGGGCCCGGAATTCAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGCAAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000574515.1
ENST00000637138.1
CDS TCA 72 bp CCTTGCACTCGAGCTTGTAGCCAAATGTGTTGGGGCTaGGGTTGTCCTCTTCCTCCTCCTCACAGATGCTGC +
Preference number: 6 (lower is better)
Translates to: PCTRACSQMCWG*GCPLPPPHRCC
Trigger: GCAGCATCTGTGAGGAGGAGGAAGAGGACAACCTCAGCCCCAACACATTTGGCTACAAGCTCGAGTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS GCA 72 bp AGAAAGCCTTTGCAATCTGAGGGACACTGGGAAGCTTaGTCAGTCCAGCCAAGGGGATCCGCTCATGTACCG +
Preference number: 6 (lower is better)
Translates to: RKPLQSEGHWEA*SVQPRGSAHVP
Trigger: CGGTACATGAGCGGATCCCCTTGGCTGGACTGAGCAAGCTTCCCAGTGTCCCTCAGATTGCAAAGGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS GCA 72 bp GCTGTTGGCCAGCTCCTGCTTCTTGACCTTCAGACTTaGCAGCATGGTCTTGTCGATCCTCTGACCTCCATC +
Preference number: 6 (lower is better)
Translates to: AVGQLLLLDLQT*QHGLVDPLTSI
Trigger: GATGGAGGTCAGAGGATCGACAAGACCATGCTGGCAAGTCTGAAGGTCAAGAAGCAGGAGCTGGCCAACAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540393.6
CDS CCA 72 bp CTCAGACTTTATCTCCTGAGAGGAGTGTCCACCATCTaGGGTCTTGGGTGTGCTGGATGTGCTGTCACATCG +
Preference number: 6 (lower is better)
Translates to: LRLYLLRGVSTI*GLGCAGCAVTS
Trigger: CGATGTGACAGCACATCCAGCACACCCAAGACCCCAGATGGTGGACACTCCTCTCAGGAGATAAAGTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS CCA 72 bp GCCTCCCTTCTCCACAACCTCGTCGATGCTGGGGTATaGGATATAGTCGTCCTGCATTTTCTCCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: ASLLHNLVDAGV*DIVVLHFLQHL
Trigger: GAGATGCTGGAGAAAATGCAGGACGACTATATCCCATACCCCAGCATCGACGAGGTTGTGGAGAAGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366401.8
CDS CAA 72 bp GCAAACTTGTCCGACTTGCAGCAGGCGTTCTCGGCATaGGTGAGCTTGGTGAGCAGAAACTCCCTGAATTCC +
Preference number: 6 (lower is better)
Translates to: ANLSDLQQAFSA*VSLVSRNSLNS
Trigger: GGAATTCAGGGAGTTTCTGCTCACCAAGCTCACCAATGCCGAGAACGCCTGCTGCAAGTCGGACAAGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000574515.1
ENST00000637138.1
CDS TCA 72 bp TTTCACATTAGTGACCCGCACCAGAGCTGGCATGGCTaGGCTTGTCAAAGCGGAATTTCAGGTTCGATCTCG +
Preference number: 6 (lower is better)
Translates to: FHISDPHQSWHG*ACQSGISGSIS
Trigger: CGAGATCGAACCTGAAATTCCGCTTTGACAAGCTCAGCCATGCCAGCTCTGGTGCGGGTCACTAATGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1
CDS CCA 72 bp TCTCCTTGTTGGGGCAGATTTCCGGAGAGCTGGGATTaGATGAGGTCTCAGACTTTATCTCCTGAGAGGAGT +
Preference number: 6 (lower is better)
Translates to: SPCWGRFPESWD*MRSQTLSPERS
Trigger: ACTCCTCTCAGGAGATAAAGTCTGAGACCTCATCCAATCCCAGCTCTCCGGAAATCTGCCCCAACAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000575979.1
ENST00000637138.1
CDS GCA 72 bp CTTGGGGTACAGGACAGGATTGAATCTCAGTCCCACTaGATCATCACAGAAAGCCTTTGCAATCTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: LGVQDRIESQSH*IITESLCNLRD
Trigger: GTCCCTCAGATTGCAAAGGCTTTCTGTGATGATGCAGTGGGACTGAGATTCAATCCTGTCCTGTACCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254695.13
ENST00000366401.8
ENST00000540393.6
ENST00000542807.1
ENST00000637138.1