RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAP1GAP (Homo sapiens)

Ensembl gene IDs: ENSG00000076864

Ensembl transcript IDs: ENST00000290101.8, ENST00000317967.11, ENST00000374757.7, ENST00000374761.6, ENST00000374763.6, ENST00000374765.8, ENST00000374765.9, ENST00000447293.5, ENST00000464457.1, ENST00000471600.6, ENST00000482984.5, ENST00000495204.5, ENST00000542643.6, ENST00000611549.4

Found 1101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTaGACTCTCGGCCAGCTGAGACTCTTGGCCTGGAGGGCCCAGCAT +
Preference number: 1 (lower is better)
Translates to: LCRAAPSMAVGGGKA*TLGQLRLLAWRAQH
Trigger: ATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR TCA 90 bp CCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTaGGACTCTTGGCCTGGAGGGCCCAGCATGGGATGGCAGGGGTTA +
Preference number: 1 (lower is better)
Translates to: PPWRSGEARPGLSAS*DSWPGGPSMGWQGL
Trigger: TAACCCCTGCCATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR GCA 90 bp CAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: QNWRVQEAYWAQPAP*PSAHLGLQGPQEAG
Trigger: CCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR CCA 90 bp GGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATGGCAGGGGTTAAGCTGGGTGCTGGC +
Preference number: 1 (lower is better)
Translates to: GGGKAWTLGQLRLLA*RAQHGMAGVKLGAG
Trigger: GCCAGCACCCAGCTTAACCCCTGCCATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR GCA 90 bp GGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCT +
Preference number: 1 (lower is better)
Translates to: GSPRAGVGLQGRGLV*LGLTRHLPLVLLWP
Trigger: AGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
3UTR TCA 90 bp AGCCCAGCTGGGGCATGTGCTGCTCAGATGCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGT +
Preference number: 1 (lower is better)
Translates to: SPAGACAAQMLPAGS*SRDTQGPPTCRRLG
Trigger: ACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR GCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAAC +
Preference number: 1 (lower is better)
Translates to: APNPVLTPPHITSSL*CLQGLSSPHGAVSN
Trigger: GTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR GCA 90 bp CCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCT +
Preference number: 1 (lower is better)
Translates to: PNPVLTPPHITSSLC*LQGLSSPHGAVSNS
Trigger: AGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAGTCCAGGAGGCATACTaGGCACAGCCGGCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEAVQEAY*AQPAPC
Trigger: GCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGAC...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGGTCCAGGAGGCATACTaGGCACAGCCGGCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRVQEAY*AQPAPC
Trigger: GCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGAC...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 2 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGG +
Preference number: 2 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGAQPAP*PSAHLG
Trigger: CCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGC...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGCAGGGGTTAAGCTaGGTGCTGGCTGAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAWQGLS*VLAEEP
Trigger: TGGCTCCTCAGCCAGCACCCAGCTTAACCCCTGCCA...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGATGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 2 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCACGGCTCCCAACCCAGTaGTCACTCCCCCACATATCA +
Preference number: 2 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEARLPTQ*SLPHIS
Trigger: TGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLADSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATAC +
Preference number: 2 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRDLWQN*RVQEAY
Trigger: GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTC...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR CAA 90 bp GCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTaGGCCTGGAGGGCCCAGCATGGGATGGCAGGGGTTAAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: AVGGGKAWTLGQLRL*AWRAQHGMAGVKLG
Trigger: ACCCAGCTTAACCCCTGCCATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 2 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCAGAACCCAAATTaGAAACCAGGACCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGQQNPN*KPGPGS
Trigger: GGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTG...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 2 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTTGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 2 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGCATCGGCAGACCTGTaGCAGAACTGGAGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAASADL*QNWRVQ
Trigger: CTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGC...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAGTCATGTGTAGGCAGTaGACAGGGCATCGGCAGACC +
Preference number: 2 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRVMCRQ*TGHRQT
Trigger: GGTCTGCCGATGCCCTGTCCACTGCCTACACATGAC...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGSSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 2 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 2 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLALSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGG +
Preference number: 2 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGAQPAP*PSAHLG
Trigger: CCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGC...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGTTGCCGGCGTCTGGGTaGGGTGATCGAGAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQLPASG*GDREGP
Trigger: AGGCCCCTCTCGATCACCCCACCCAGACGCCGGCAA...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR CCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGTGGCAGGGGTTAAGCTaGGTGCTGGCTGAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWWQGLS*VLAEEP
Trigger: TGGCTCCTCAGCCAGCACCCAGCTTAACCCCTGCCA...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR CAA 90 bp CAGCCCAGCTGGGGCATGTGCTGCTCAGATGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGG +
Preference number: 2 (lower is better)
Translates to: QPSWGMCCSDASSWI*ISGHAGSPNLPASG
Trigger: CCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCTGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR GCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGAGCTGGGGCATGTGCTaGTCAGATGCTTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWSWGMC*SDASSW
Trigger: CCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCT...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR CCA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTTTGCCGGCGTCTGGGTaGGGTGATCGAGAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGLPASG*GDREGP
Trigger: AGGCCCCTCTCGATCACCCCACCCAGACGCCGGCAA...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR CCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 2 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATAC +
Preference number: 2 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWDLWQN*RVQEAY
Trigger: GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTC...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGLPAGS*SRDTQG
Trigger: ACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAG...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR TCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGCAGGGTCCCCCAACTTaGCGGCGTCTGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRQGPPT*RRLGGV
Trigger: CACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTG...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 2 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGTGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 2 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPDSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCATCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPSSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAAQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 2 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 2 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 2 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCGGCTCCCAACCCAGTaGTCACTCCCCCACATATCA +
Preference number: 2 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLRLPTQ*SLPHIS
Trigger: TGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: TRLPTQCSLPHISHPPCAGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LETRTRLPTQCSLPHISHDSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGAAGAAGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 2 (lower is better)
Translates to: GSRDLKKQGRVIGGPWEEGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...TTCTTCCCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 2 (lower is better)
Translates to: TRLPTQCSLPHISHPPCAGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCCCCCTTGTGCTTCTGTaGCCTCATCTGCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGPLVLL*PHLLSF
Trigger: GAAACTGAGCAGATGAGGCCACAGAAGCACAAGGGG...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACGCATCGGCAGACCTGTaGCAGAACTGGAGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHASADL*QNWRVQ
Trigger: CTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGC...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 2 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCATGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 2 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 2 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSTSSLC*LQGLSS
Trigger: AGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGT...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 2 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGCTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATG +
Preference number: 2 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRLRLLA*RAQHGM
Trigger: CATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAG...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLSSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGAGCTGGGGCATGTGCTaGTCAGATGCTTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRSWGMC*SDASSW
Trigger: CCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCT...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR GCA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 2 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR CCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTAGGGCTGCCCCCTCCATaGCGGTCGGGGGAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVGLPPP*RSGEAR
Trigger: CCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCC...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGCATGTGCTGCTCAGATaGTTCCAGCTGGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQHVLLR*FQLDLD
Trigger: ATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR GCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
3UTR-3UTR GCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 2 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGT +
Preference number: 2 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLLPAGS*SRDTQG
Trigger: ACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR TCA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGGGCTGGCCTTTGGCGTaGCGCCTAAAAAGTGTGACC +
Preference number: 2 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGGWPLA*RLKSVT
Trigger: GGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCC...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCGGCTCCCAACCCAGTaGTCACTCCCCCACATATCA +
Preference number: 2 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLRLPTQ*SLPHIS
Trigger: TGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CCA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 2 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR CCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCAGCAGAACCCAAATTaGAAACCAGGACCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLQQNPN*KPGPGS
Trigger: GGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR GCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGCATGTGCTGCTCAGATaGTTCCAGCTGGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRHVLLR*FQLDLD
Trigger: ATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR CCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 2 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR TCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTACCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR CCA 72 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATaGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCC +
Preference number: 3 (lower is better)
Translates to: RAPSSCAGLPPP*RSGEARPGLSA
Trigger: GGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR GCA 72 bp CCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTaGCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTG +
Preference number: 3 (lower is better)
Translates to: PDTQGLPAAVPG*PLHGGRGRQGL
Trigger: CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR CCA 72 bp GCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTaGACTCTCGGCCAGCTGAGACTCTTGGCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: AAPSMAVGGGKA*TLGQLRLLAWR
Trigger: CCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGGCCAGCTGAGACTCTaGGCCTGGAGGGCCCAGCAT +
Preference number: 3 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAGQLRL*AWRAQH
Trigger: ATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCC...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR GCA 72 bp AAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTaGCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: KCDQTHKGSQQL*RAAPSMAVGGG
Trigger: GCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAGCAGGGTCCCCCAACTaGCCGGCGTCTGGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: AASLIPGLDGSALQRQPRAGSPN*PASGWG
Trigger: ACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGC...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR GCA 72 bp GCCAGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAGATGGGTGGGCCATGG +
Preference number: 3 (lower is better)
Translates to: ASSFPDPRSGRL*PAETAQMGGPW
Trigger: CCATGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
3UTR-3UTR CAA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGG +
Preference number: 3 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPASSWI*ISGHAG
Trigger: CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGC...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR CCA 72 bp GCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCT +
Preference number: 3 (lower is better)
Translates to: AVDRASADLWQN*RVQEAYWAQPA
Trigger: AGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGCATATCACATCCTCCTaGTGCTGCCTCCAGGGGCTA +
Preference number: 3 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAHITSS*CCLQGL
Trigger: TAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATG...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR CCA 72 bp AAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATGGCAGGGGTTAAGCTG +
Preference number: 3 (lower is better)
Translates to: KAWTLGQLRLLA*RAQHGMAGVKL
Trigger: CAGCTTAACCCCTGCCATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR GCA 72 bp CGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCACCTTCCCCTTGTGCTT +
Preference number: 3 (lower is better)
Translates to: RAGVGLQGRGLV*LGLTRHLPLVL
Trigger: AAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCAACACCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
3UTR CCA 72 bp CCCAGCTGGGGCATGTGCTGCTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACACGCAGGGTCCCCCAAC +
Preference number: 3 (lower is better)
Translates to: PSWGMCCSDASS*ILISGHAGSPN
Trigger: GTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
3UTR-3UTR CAA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 3 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR TCA 72 bp TTGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTGTGCTTCTGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: LVFRAEVSSAWA*HGTFPLCFCGL
Trigger: GAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
3UTR GCA 72 bp GTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTC +
Preference number: 3 (lower is better)
Translates to: VLTPPHITSSLC*LQGLSSPHGAV
Trigger: GACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR GCA 72 bp CCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCT +
Preference number: 3 (lower is better)
Translates to: PVLTPPHITSSL*CLQGLSSPHGA
Trigger: AGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 3 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 3 (lower is better)
Translates to: LETRTRLPTQCSLPHISHHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 3 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLATSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR TCA 72 bp AAATGGGTATTGGGGCCAGGAGGCTGGCCTTTGGCGTaGCGCCTAAAAAGTGTGACCAGACACACAAGGGCT +
Preference number: 3 (lower is better)
Translates to: KWVLGPGGWPLA*RLKSVTRHTRA
Trigger: AGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCCAATACCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGCATATCACATCCTCCTaGTGCTGCCTCCAGGGGCTA +
Preference number: 3 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWHITSS*CCLQGL
Trigger: TAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATG...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp GGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGAAGAAACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 3 (lower is better)
Translates to: GSRDLKKQGRVIGGPWEETSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...TTCTTCCCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
3UTR-3UTR CAA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTAACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 3 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVTSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.8
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLAQPAP*PSAHLG
Trigger: CCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGC...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACGCAGCTGTGCCGGGCTaGCCCCTCCATGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDAAVPG*PLHGGR
Trigger: CCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGGCTCCCAGCAGCTGTaGCGGGCTGCCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLGSQQL*RAAPSM
Trigger: CATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCC...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGGGTCCCCCAACTTaGCGGCGTCTGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGQGPPT*RRLGGV
Trigger: CACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTG...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR GCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAGCAGCTGTGCCGGGCTaGCCCCTCCATGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRAAVPG*PLHGGR
Trigger: CCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCATCCGGCACTTGGTCCTaGGCAGCAGCCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEASGTWS*AAAAGA
Trigger: AGCACCTGCGGCTGCTGCTCAGGACCAAGTGCCGGA...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGCGACTTGGGCTCCTGTaGGACGTGCCCGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLRLGLL*DVPAVW
Trigger: CCAGACAGCGGGCACGTCTCACAGGAGCCCAAGTCG...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCGGACTCTCGGCCAGCTaGGACTCTTGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGGLSAS*DSWPGG
Trigger: CCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCC...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCGCAGAGAACAGCGCGTaGAGGCAGCCTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGAENSA*RQPPEP
Trigger: CGGCTCTGGAGGCTGCCTGCACGCGCTGTTCTCTGC...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR GCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGCGCCTCTGCTCTCTaGGCTGCGGTCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEASASAL*AAVSAL
Trigger: CAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCT...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACAGCGCCTCTGCTCTCTaGGCTGCGGTCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDSASAL*AAVSAL
Trigger: CAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCT...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCGCCCCATGGCATCCATaGACTGGCTGCGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAAPWHP*TGCGSG
Trigger: TCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGC...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCATTGCCGGCGTCTGGGTaGGGTGATCGAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEALPASG*GDREGP
Trigger: AGGCCCCTCTCGATCACCCCACCCAGACGCCGGCAA...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR CCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGGGGGAGGCAAGGCCTaGACTCTCGGCCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLGGGKA*TLGQLR
Trigger: TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCC...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGAGTCCTCCTCTGTTTTaGGGGGCGGCGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLSPPLF*GAAGRS
Trigger: GCTCCTTCCCGCCGCCCCTCAAAACAGAGGAGGACT...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGTCCTCCTCTGTTTTaGGGGGCGGCGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEASPPLF*GAAGRS
Trigger: GCTCCTTCCCGCCGCCCCTCAAAACAGAGGAGGACT...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLSSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCGCCCGCGGCCGCCGCTaGAGCTCTGCTCAGATGCGG +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGARGRR*SSAQMR
Trigger: CCGCATCTGAGCAGAGCTGCAGCGGCGGCCGCGGGC...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR GCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAATGTGCCGCTTCCGCTaGAACTGCTGGGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEAMCRFR*NCWASP
Trigger: AGGGGACGCCCAGCAGTTGCAGCGGAAGCGGCACAT...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGTGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGC +
Preference number: 4 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSCQWRC*GGSRTG
Trigger: GCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCA...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWAQPAP*PSAHLG
Trigger: CCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGC...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCGGCTCCCAGCAGCTGTaGCGGGCTGCCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVGSQQL*RAAPSM
Trigger: CATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCC...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTGTTCTCGATGCCAATaGCGCTGCTGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDCSRCQ*RCCGGS
Trigger: GCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACA...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKALVVGD*SGSVSG
Trigger: CCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAA...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCATTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEALVVGD*SGSVSG
Trigger: CCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAA...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGAGCAGCAGCCGCAGGTaGTCTTGGTCCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRSSSRR*SWSPMT
Trigger: TGTCATCGGGGACCAAGAGCACCTGCGGCTGCTGCT...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACCTTCCACGGTTCCTATaGCTATGGCACTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDLPRFL*LWHCPG
Trigger: GCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAG...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGAQPAP*PSAHLG
Trigger: CCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGC...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAGCCCCATGGCATCCATaGACTGGCTGCGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRAPWHP*TGCGSG
Trigger: TCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGC...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCATCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEASRCGW*TRCWAS
Trigger: AGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGA...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCGCTGGCGAAGCTGCTaGCACTGGACGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETRWRSC*HWTRSG
Trigger: CCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCG...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCACTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATG +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEALRLLA*RAQHGM
Trigger: CATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAG...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGGCAGGAGATGGGGATaGCATCATGGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLGRRWG*HHGMSG
Trigger: GCCGGACATACCATGATGTCATCCCCATCTCCTGCC...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCCGACTTGGGCTCCTGTaGGACGTGCCCGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVRLGLL*DVPAVW
Trigger: CCAGACAGCGGGCACGTCTCACAGGAGCCCAAGTCG...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRLPAGS*SRDTQG
Trigger: ACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAG...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCGGGAAGTGCTGGTTCTaGCCATCGCTCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAGKCWF*PSLLHT
Trigger: TGTGTGGAGGAGCGATGGGCAGAACCAGCACTTCCC...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCATGTCGTTCCCGATGTaGCGCTTCCGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAMSFPM*RFRCNC
Trigger: GCAGTTGCAGCGGAAGCGGCACATCGGGAACGACAT...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACATGTCGTTCCCGATGTaGCGCTTCCGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDMSFPM*RFRCNC
Trigger: GCAGTTGCAGCGGAAGCGGCACATCGGGAACGACAT...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACG +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGRCQWR*CGGSRT
Trigger: CGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCG...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCGGCTCCCAACCCAGTaGTCACTCCCCCACATATCA +
Preference number: 4 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGRLPTQ*SLPHIS
Trigger: TGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAGGTAGATGCGGGCTGTaGGGTTGCACTCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEAGRCGL*GCTRAS
Trigger: TGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACC...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGAGTGAGAAGACAAGGTaGCCGAGGGCAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRSEKTR*PRAASS
Trigger: ACTGGACGCTGCCCTCGGCCACCTTGTCTTCTCACT...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACAGCCGCAGGTGCTCTTaGTCCCCGATGACATCGTAC +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDSRRCS*SPMTSY
Trigger: GTACGATGTCATCGGGGACCAAGAGCACCTGCGGCT...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDPTSSS*GSSQGQ
Trigger: TTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGG...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGACGTGCCCGCTGTCTaGGGTCTTCTGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSDVPAV*GLLTSR
Trigger: CCGGCTGGTCAGAAGACCCCAGACAGCGGGCACGTC...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCTCTCCGCTCTGTTCTTaGTCGTGGGCATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGSPLCS*SWASLG
Trigger: CCCCAGAGATGCCCACGACCAAGAACAGAGCGGAGA...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPDSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAGTCATGTGTAGGCAGTaGACAGGGCATCGGCAGACC +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEAVMCRQ*TGHRQT
Trigger: GGTCTGCCGATGCCCTGTCCACTGCCTACACATGAC...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGGGGGAGGCAAGGCCTaGACTCTCGGCCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAGGGKA*TLGQLR
Trigger: TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCC...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGACTCAGGCCCCTTCCTaGACACAGCGGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWTQAPS*TQRGPG
Trigger: TCCCGGACCCCGCTGTGTTCAGGAAGGGGCCTGAGT...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTCTGTCTGGGGTCTTCTaGCCAGCCGGAGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPLSGVF*PAGGLS
Trigger: GGAGAGCCCTCCGGCTGGTCAGAAGACCCCAGACAG...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTCGACTTGGGCTCCTGTaGGACGTGCCCGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPRLGLL*DVPAVW
Trigger: CCAGACAGCGGGCACGTCTCACAGGAGCCCAAGTCG...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGATCTCTGGGGAGCTCTaGGTGGATGAGTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRISGEL*VDEFSD
Trigger: GTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGAT...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCGGACTCTCGGCCAGCTaGGACTCTTGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLAGLSAS*DSWPGG
Trigger: CCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCC...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGATGTGCCGCTTCCGCTaGAACTGCTGGGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSMCRFR*NCWASP
Trigger: AGGGGACGCCCAGCAGTTGCAGCGGAAGCGGCACAT...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCATGTGCCGCTTCCGCTaGAACTGCTGGGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVMCRFR*NCWASP
Trigger: AGGGGACGCCCAGCAGTTGCAGCGGAAGCGGCACAT...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAAGCCGCCGCCCCCACTaGCATTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRSRRPH*HSPSCP
Trigger: AGGACAAGATGGAGAATGGCAGTGGGGGCGGCGGCT...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGRCQWR*CGGSRT
Trigger: CGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCG...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCCAGGGTCCCCCAACTTaGCGGCGTCTGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGQGPPT*RRLGGV
Trigger: CACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTG...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR GCA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGTGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRTSSLC*LQGLSS
Trigger: AGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGT...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGCAGCTGTGCCGGGCTaGCCCCTCCATGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLAAVPG*PLHGGR
Trigger: CCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTGTCCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETVLERL*SLRCGL
Trigger: GAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGAC...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKARHAGS*TRSCRA
Trigger: TGCCCGACATGATCGCGTCCAACTTCCTGCATGCCT...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAATGGCATCCATGGACTaGCTGCGGCTCCGGATGACC +
Preference number: 4 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRMASMD*LRLRMT
Trigger: GGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCAT...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCGCCCCATGGCATCCATaGACTGGCTGCGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGAPWHP*TGCGSG
Trigger: TCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGC...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGTGGTGGACACGGTGTTaGGCTTCTTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRWWTRC*ASCCSA
Trigger: GGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCA...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTGGTGGACACGGTGTTaGGCTTCTTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDWWTRC*ASCCSA
Trigger: GGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCA...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTCCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPPGRGC*ARSSRC
Trigger: ACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGG...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGCGGTTCCTATGCCTATaGCACTGCCCCGGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSRFLCL*HCPGVR
Trigger: TCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCG...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGCTGGGGAGCTCTGAGTaGATGAGTTCTCCGACTTGG +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLLGSSE*MSSPTW
Trigger: CCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAG...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCCGCTGGCGAAGCTGCTaGCACTGGACGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGRWRSC*HWTRSG
Trigger: CCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCG...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCCGCTGGCGAAGCTGCTaGCACTGGACGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGRWRSC*HWTRSG
Trigger: CCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCG...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCAAGGAGTCCCGCTTGTaGGGTGTTCCTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAKESRL*GVPEDD
Trigger: GTCATCCTCAGGAACACCCCACAAGCGGGACTCCTT...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGDSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGGCTGCCCCCTCCATaGCGGTCGGGGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASGLPPP*RSGEAR
Trigger: CCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCC...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACGGGCTGCCCCCTCCATaGCGGTCGGGGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYGLPPP*RSGEAR
Trigger: CCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCC...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACATCGTACTTGAGTaGGAAGACAAGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLDIVLE*EDKVAE
Trigger: CTCGGCCACCTTGTCTTCTCACTCAAGTACGATGTC...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACGACATCGTACTTGAGTaGGAAGACAAGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDDIVLE*EDKVAE
Trigger: CTCGGCCACCTTGTCTTCTCACTCAAGTACGATGTC...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCACCCCAAAGCAGGTGCTaGGTGCCATCGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPPQSRC*VPSELP
Trigger: CGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGG...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR TCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGSSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLAQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGGACTCTCGGCCAGCTaGGACTCTTGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPGLSAS*DSWPGG
Trigger: CCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCGGACTCTCGGCCAGCTaGGACTCTTGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGGLSAS*DSWPGG
Trigger: CCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCC...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCAGCGGGAGAAGTCCTTaGGCGCCTCTGCTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPSGRSP*APLLSA
Trigger: CGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCT...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTCGTAGGCCCCGAAGGTaGAGCTGCGCTTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCARRPRR*SCASGR
Trigger: GCGGCCGGAAGCGCAGCTTCACCTTCGGGGCCTACG...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471600.6
ENST00000495204.5
CDS-3UTR TCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCGTAGGCCCCGAAGGTaGAGCTGCGCTTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVRRPRR*SCASGR
Trigger: GCGGCCGGAAGCGCAGCTTCACCTTCGGGGCCTACG...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471600.6
ENST00000495204.5
CDS-3UTR GCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCGCCCCAAGACCTCGTaGACGCTCGGGTATGGAATG +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETRPKTS*TLGYGM
Trigger: CATTCCATACCCGAGCGTGCACGAGGTCTTGGGGCG...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTTTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETLVVGD*SGSVSG
Trigger: CCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAA...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGAGCAGCAGCCGCAGGTaGTCTTGGTCCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMASSSRR*SWSPMT
Trigger: TGTCATCGGGGACCAAGAGCACCTGCGGCTGCTGCT...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGTGTTGGGCTTCTTGTTaGTCAGCCCCATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRCWASC*SAPWHP
Trigger: TGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACA...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGAGTGCCATCGGAGCTaGCGCCACTCCATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGECHRS*RHSIPH
Trigger: GTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTC...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR GCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTTGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGC +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLCQWRC*GGSRTG
Trigger: GCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCA...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGTGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVCQWRC*GGSRTG
Trigger: GCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCA...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGTGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGC +
Preference number: 4 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGCQWRC*GGSRTG
Trigger: GCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCA...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACG +
Preference number: 4 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLRCQWR*CGGSRT
Trigger: CGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCG...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCTCTCCCTCTTCTCCTaGACCTCCTGTATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRLSLFS*TSCMFS
Trigger: CGAGAACATACAGGAGGTGCAGGAGAAGAGGGAGAG...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCAGCGCCTCTGCTCTCTaGGCTGCGGTCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGSASAL*AAVSAL
Trigger: CAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCT...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCAGCGCCTCTGCTCTCTaGGCTGCGGTCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGSASAL*AAVSAL
Trigger: CAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCT...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCTGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAAAQPAP*PSAHLG
Trigger: CCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGC...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGGCAGCTGTGCCGGGCTaGCCCCTCCATGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWAAVPG*PLHGGR
Trigger: CCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACCAGGGTCCCCCAACTTaGCGGCGTCTGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHQGPPT*RRLGSC
Trigger: GCAGCTCCCCAGACGCCGGCAAGTTGGGGGACCCTG...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACGTGCACGCTCGGGTATaGAATGTAGTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDVHARV*NVVLLC
Trigger: ACAGAGGAGGACTACATTCCATACCCGAGCGTGCAC...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAGGTAGATGCGGGCTGTaGGGTTGCACTCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRGRCGL*GCTRAS
Trigger: TGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACC...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGGGAGTGTTCTCATCCTaGAAGACCACAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRGVFSS*KTTATM
Trigger: CATCGTGGCTGTGGTCTTCCAGGATGAGAACACTCC...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGCCCCATGGCATCCATaGACTGGCTGCGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPAPWHP*TGCGSG
Trigger: TCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCTCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVSRCGW*TRCWAS
Trigger: AGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGA...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGTCTCCTCCACCACGCTaGCGAAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWSPPPR*RSCWHW
Trigger: CCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGA...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHDSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCGTCCAGGAGGCATACTaGGCACAGCCGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGVQEAY*AQPAPC
Trigger: GCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGAC...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCGTCCAGGAGGCATACTaGGCACAGCCGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGVQEAY*AQPAPC
Trigger: GCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGAC...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGTGGCAGGGGTTAAGCTaGGTGCTGGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAWQGLS*VLAEEP
Trigger: TGGCTCCTCAGCCAGCACCCAGCTTAACCCCTGCCA...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGCTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATG +
Preference number: 4 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSLRLLA*RAQHGM
Trigger: CATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAG...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCGGGGGAGGCAAGGCCTaGACTCTCGGCCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGGGGKA*TLGQLR
Trigger: TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCC...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGCTGCCCCCTCCATaGCGGTCGGGGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPGLPPP*RSGEAR
Trigger: CCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCC...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGTTCCAAAATGGGTATTaGGGCCAGGAGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLFQNGY*GQEAGL
Trigger: AAGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAA...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCTCTGCTTCCTCCGAATaGGGGTCCGAGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPSASSE*GSEGGW
Trigger: CCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGA...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGCGGCACTTCAGCTaGCCCAGCCGGCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPGRHFS*PSRLLA
Trigger: GGCCAGGAGCCGGCTGGGCCAGCTGAAGTGCCGCCC...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374761.6
CDS-3UTR TCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTGACAGGTCTAGTGCCTaGGGGAAGTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETDRSSA*GKCWFC
Trigger: GCAGAACCAGCACTTCCCTCAGGCACTAGACCTGTC...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCAGTCCTCCTCTGTTTTaGGGGGCGGCGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGSPPLF*GAAGRS
Trigger: GCTCCTTCCCGCCGCCCCTCAAAACAGAGGAGGACT...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGAGTCCTCCTCTGTTTTaGGGGGCGGCGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGSPPLF*GAAGRS
Trigger: GCTCCTTCCCGCCGCCCCTCAAAACAGAGGAGGACT...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCGGCAGGAGATGGGGATaGCATCATGGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVGRRWG*HHGMSG
Trigger: GCCGGACATACCATGATGTCATCCCCATCTCCTGCC...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGTTTCCTCATTGGTGCTaGAGAGTTCTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLFPHWC*RVLPRR
Trigger: CCTCCGAGGAAGAACTCTTCAGCACCAATGAGGAAA...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGACTCAGGCCCCTTCCTaGACACAGCGGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQTQAPS*TQRGPG
Trigger: TCCCGGACCCCGCTGTGTTCAGGAAGGGGCCTGAGT...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCCCAGGGACAATCAGTaGCAGGCCCCAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGPRDNQ*QAPKQV
Trigger: CACCTGCTTTGGGGCCTGTCACTGATTGTCCCTGGG...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR GCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCTTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLALVVGD*SGSVSG
Trigger: CCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAA...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCTGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLACGLWG*TRASPW
Trigger: CCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCA...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGAGCAGCAGCCGCAGGTaGTCTTGGTCCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWSSSRR*SWSPMT
Trigger: TGTCATCGGGGACCAAGAGCACCTGCGGCTGCTGCT...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCTTCCACGGTTCCTATaGCTATGGCACTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWLPRFL*LWHCPG
Trigger: GCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAG...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCTGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGC +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPCQWRC*GGSRTG
Trigger: GCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCA...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPRCQWR*CGGSRT
Trigger: CGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCG...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCCTGTATGTTCTCGATaGCAATGGCGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETPVCSR*QWRCCG
Trigger: GCCGCAGCAGCGCCATTGGCATCGAGAACATACAGG...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGGCTCCTGTGAGACGTaGCCGCTGTCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPGSCET*PLSGVF
Trigger: GAAGACCCCAGACAGCGGGCACGTCTCACAGGAGCC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGCCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQPRWRS*WHWTRS
Trigger: GCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGG...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGACCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRPRWRS*WHWTRS
Trigger: GCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGG...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCAGGGTCCCCCAACTTaGCGGCGTCTGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWQGPPT*RRLGGV
Trigger: CACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR GCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCAGCTGGGGCATGTGCTaGTCAGATGCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVSWGMC*SDASSW
Trigger: CCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCT...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCGCACAGCCGGCTCCCTaGCCCTCAGCCCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPAQPAP*PSAHLG
Trigger: CCCCAGGTGGGCTGAGGGGCAGGGAGCCGGCTGTGC...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCGCAGCTGTGCCGGGCTaGCCCCTCCATGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGAAVPG*PLHGGR
Trigger: CCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTGGCTCCCAGCAGCTGTaGCGGGCTGCCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VLLWPHLLSFTFRGGGPAGSQQL*RAAPSM
Trigger: CATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCC...AGCCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR GCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGTCCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLVLERL*SLRCGL
Trigger: GAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGAC...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGATGGGGATGACATCATaGTATGTCCGGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLMGMTS*YVRHLV
Trigger: GACCAAGTGCCGGACATACCATGATGTCATCCCCAT...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTGTCCCCTTCCGTGTATaGCAGCTTGGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETVPFRV*QLGGHV
Trigger: CACGTGTCCACCAAGCTGCCATACACGGAAGGGGAC...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGGTCAGCAAAAATTCCTaGAACTCAGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRVSKNS*NSGPFL
Trigger: CAGGAAGGGGCCTGAGTTCCAGGAATTTTTGCTGAC...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACGTCAGCAAAAATTCCTaGAACTCAGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDVSKNS*NSGPFL
Trigger: CAGGAAGGGGCCTGAGTTCCAGGAATTTTTGCTGAC...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCATGGCATCCATGGACTaGCTGCGGCTCCGGATGACC +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGMASMD*LRLRMT
Trigger: GGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCAT...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCGCCCCATGGCATCCATaGACTGGCTGCGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLAPWHP*TGCGSG
Trigger: TCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGC...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCAGCTCCCGCTGTGGCTaGTGGACACGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGSSRCG*WTRCWA
Trigger: AGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCT...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCAGCTCCCGCTGTGGCTaGTGGACACGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGSSRCG*WTRCWA
Trigger: AGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCT...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGCCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVPGRGC*ARSSRC
Trigger: ACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGG...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTGTTCTCGATGCCAATaGCGCTGCTGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGCSRCQ*RCCGGS
Trigger: GCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACA...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACGACGTGCCCGCTGTCTaGGGTCTTCTGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHDVPAV*GLLTSR
Trigger: CCGGCTGGTCAGAAGACCCCAGACAGCGGGCACGTC...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGTCTCCTCCACCACGCTaGCGAAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGSPPPR*RSCWHW
Trigger: CCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGA...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLDSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGGGAGGCAAGGCCTaGACTCTCGGCCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVGGGKA*TLGQLR
Trigger: TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCC...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCGGGCTGCCCCCTCCATaGCGGTCGGGGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLGLPPP*RSGEAR
Trigger: CCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCC...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGGGCTGCCCCCTCCATaGCGGTCGGGGGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLGLPPP*RSGEAR
Trigger: CCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCTGTGTTCTGCCAGCTaGCCCCCGCGGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWLCSAS*PPRAAS
Trigger: GCTCGCTGCCCGCGGGGGCCAGCTGGCAGAACACAG...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374761.6
CDS-3UTR TCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTCACTCCGGCGAGAAGTaGAGGACTTGTCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPHSGEK*RTCPPQ
Trigger: TTGGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTG...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR TCA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGTCCGGCACTTGGTCCTaGGCAGCAGCCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGSGTWS*AAAAGA
Trigger: AGCACCTGCGGCTGCTGCTCAGGACCAAGTGCCGGA...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTCCGGCACTTGGTCCTaGGCAGCAGCCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLSGTWS*AAAAGA
Trigger: AGCACCTGCGGCTGCTGCTCAGGACCAAGTGCCGGA...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGTCCGGCACTTGGTCCTaGGCAGCAGCCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVSGTWS*AAAAGA
Trigger: AGCACCTGCGGCTGCTGCTCAGGACCAAGTGCCGGA...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGAACCGATCCACATTaGCGTCTTCACACACCAACT +
Preference number: 4 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEARTDPH*RLHTPT
Trigger: AGTTGGTGTGTGAAGACGTCAATGTGGATCGGTTCT...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGACTCAGGCCCCTTCCTaGACACAGCGGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLTQAPS*TQRGPG
Trigger: TCCCGGACCCCGCTGTGTTCAGGAAGGGGCCTGAGT...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTCCCCAAAGCAGGTGCTaGGTGCCATCGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAPQSRC*VPSELP
Trigger: CGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGG...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR TCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCGGACTCTCGGCCAGCTaGGACTCTTGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAGLSAS*DSWPGG
Trigger: CCCTCCAGGCCAAGAGTCTCAGCTGGCCGAGAGTCC...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCTGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGCGLWG*TRASPW
Trigger: CCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCA...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGATGTGCCGCTTCCGCTaGAACTGCTGGGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WILISGHAGSPNLPASGWMCRFR*NCWASP
Trigger: AGGGGACGCCCAGCAGTTGCAGCGGAAGCGGCACAT...CCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR GCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACG +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSRCQWR*CGGSRT
Trigger: CGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCG...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCCTGTATGTTCTCGATaGCAATGGCGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWPVCSR*QWRCCG
Trigger: GCCGCAGCAGCGCCATTGGCATCGAGAACATACAGG...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGGGCTCCTGTGAGACGTaGCCGCTGTCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQGSCET*PLSGVF
Trigger: GAAGACCCCAGACAGCGGGCACGTCTCACAGGAGCC...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTAGCGCCTCTGCTCTCTaGGCTGCGGTCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPSASAL*AAVSAL
Trigger: CAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACCCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYPRWRS*WHWTRS
Trigger: GCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGG...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLPRWRS*WHWTRS
Trigger: GCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGG...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTCAGGGTCCCCCAACTTaGCGGCGTCTGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VLLWPHLLSFTFRGGGPAQGPPT*RRLGGV
Trigger: CACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTG...AGCCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR GCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCAGGGTCCCCCAACTTaGCGGCGTCTGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHQGPPT*RRLGGV
Trigger: CACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTG...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
CDS-3UTR GCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGGCTCCCAGCAGCTGTaGCGGGCTGCCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLGSQQL*RAAPSM
Trigger: CATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGGTCCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQVLERL*SLRCGL
Trigger: GAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGAC...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGCGRLQ*LCLGDA
Trigger: AGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACA...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGCGRLQ*LCLGDA
Trigger: AGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACA...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGTCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGSRCGW*TRCWAS
Trigger: AGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGA...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAAGCTCCCGCTGTGGCTaGTGGACACGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRSSRCG*WTRCWA
Trigger: AGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCT...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLPGRGC*ARSSRC
Trigger: ACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGG...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACCGGTTCCTATGCCTATaGCACTGCCCCGGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHRFLCL*HCPGVR
Trigger: TCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCG...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGTGTTCTCGATGCCAATaGCGCTGCTGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQCSRCQ*RCCGGS
Trigger: GCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACA...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACGACGTGCCCGCTGTCTaGGGTCTTCTGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYDVPAV*GLLTSR
Trigger: CCGGCTGGTCAGAAGACCCCAGACAGCGGGCACGTC...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGACGTGCCCGCTGTCTaGGGTCTTCTGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVDVPAV*GLLTSR
Trigger: CCGGCTGGTCAGAAGACCCCAGACAGCGGGCACGTC...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCTCTCCGCTCTGTTCTTaGTCGTGGGCATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGSPLCS*SWASLG
Trigger: CCCCAGAGATGCCCACGACCAAGAACAGAGCGGAGA...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCGCTGGCGAAGCTGCTaGCACTGGACGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWRWRSC*HWTRSG
Trigger: CCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCG...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTTGCCGGCGTCTGGGTaGGGTGATCGAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLLPASG*GDREGP
Trigger: AGGCCCCTCTCGATCACCCCACCCAGACGCCGGCAA...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
CDS-3UTR CCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGTTGCCGGCGTCTGGGTaGGGTGATCGAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVLPASG*GDREGP
Trigger: AGGCCCCTCTCGATCACCCCACCCAGACGCCGGCAA...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCGTCCAGGAGGCATACTaGGCACAGCCGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAVQEAY*AQPAPC
Trigger: GCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGAC...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCATCGGCAGACCTGTaGCAGAACTGGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLASADL*QNWRVQ
Trigger: CTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGC...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTGTCATGTGTAGGCAGTaGACAGGGCATCGGCAGACC +
Preference number: 4 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPVMCRQ*TGHRQT
Trigger: GGTCTGCCGATGCCCTGTCCACTGCCTACACATGAC...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCCTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATG +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGLRLLA*RAQHGM
Trigger: CATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAG...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGACAGGTCTAGTGCCTaGGGGAAGTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPDRSSA*GKCWFC
Trigger: GCAGAACCAGCACTTCCCTCAGGCACTAGACCTGTC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGAGTCCTCCTCTGTTTTaGGGGGCGGCGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWSPPLF*GAAGRS
Trigger: GCTCCTTCCCGCCGCCCCTCAAAACAGAGGAGGACT...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCCAGTGAGTAGTAATTaGAATGCTCCTTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRPVSSN*NAPCRE
Trigger: TTCTCGGCAAGGAGCATTTCAATTACTACTCACTGG...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGGCAGGAGATGGGGATaGCATCATGGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGGRRWG*HHGMSG
Trigger: GCCGGACATACCATGATGTCATCCCCATCTCCTGCC...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAACTCAGGCCCCTTCCTaGACACAGCGGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPTQAPS*TQRGPG
Trigger: TCCCGGACCCCGCTGTGTTCAGGAAGGGGCCTGAGT...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTACTCAGGCCCCTTCCTaGACACAGCGGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCTQAPS*TQRGPG
Trigger: TCCCGGACCCCGCTGTGTTCAGGAAGGGGCCTGAGT...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCTGTCTGGGGTCTTCTaGCCAGCCGGAGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWLSGVF*PAGGLS
Trigger: GGAGAGCCCTCCGGCTGGTCAGAAGACCCCAGACAG...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTGTCTGGGGTCTTCTaGCCAGCCGGAGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHLSGVF*PAGGLS
Trigger: GGAGAGCCCTCCGGCTGGTCAGAAGACCCCAGACAG...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCGACTTGGGCTCCTGTaGGACGTGCCCGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHRLGLL*DVPAVW
Trigger: CCAGACAGCGGGCACGTCTCACAGGAGCCCAAGTCG...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCGGAGCTCTGAGTGGATaGGTTCTCCGACTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGGALSG*VLRLGL
Trigger: GAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCC...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTATCTCTGGGGAGCTCTaGGTGGATGAGTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPISGEL*VDEFSD
Trigger: GTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGAT...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLSSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVASSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGGCTGGCCTTTGGCGTaGCGCCTAAAAAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLGWPLA*RLKSVT
Trigger: GGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCC...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTAGCGGGAGAAGTCCTTaGGCGCCTCTGCTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPSGRSP*APLLSA
Trigger: CGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCACTCCGGCGAGAAGTaGAGGACTTGTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAHSGEK*RTCPPR
Trigger: GCGGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471600.6
ENST00000495204.5
CDS-3UTR GCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRCGLWG*TRASPW
Trigger: CCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCA...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCAGTGCTTCCGGTAGATaGGGGCTGTGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGSASGR*GLWGCT
Trigger: AGTGCAACCCCACAGCCCGCATCTACCGGAAGCACT...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATATGTGCCGCTTCCGCTaGAACTGCTGGGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHMCRFR*NCWASP
Trigger: AGGGGACGCCCAGCAGTTGCAGCGGAAGCGGCACAT...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTATGTGCCGCTTCCGCTaGAACTGCTGGGCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPMCRFR*NCWASP
Trigger: AGGGGACGCCCAGCAGTTGCAGCGGAAGCGGCACAT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGATGTCGTTCCCGATGTaGCGCTTCCGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLMSFPM*RFRCNC
Trigger: GCAGTTGCAGCGGAAGCGGCACATCGGGAACGACAT...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGATGTCGTTCCCGATGTaGCGCTTCCGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGMSFPM*RFRCNC
Trigger: GCAGTTGCAGCGGAAGCGGCACATCGGGAACGACAT...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCAGCCGCCGCCCCCACTaGCATTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLSRRPH*HSPSCP
Trigger: AGGACAAGATGGAGAATGGCAGTGGGGGCGGCGGCT...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCGCAGAGAACAGCGCGTaGAGGCAGCCTCCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPAENSA*RQPPEP
Trigger: CGGCTCTGGAGGCTGCCTGCACGCGCTGTTCTCTGC...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR GCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTGAGTGCCATCGGAGCTaGCGCCACTCCATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSECHRS*RHSIPH
Trigger: GTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTC...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR GCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCGGCTCCTGTGAGACGTaGCCGCTGTCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAGSCET*PLSGVF
Trigger: GAAGACCCCAGACAGCGGGCACGTCTCACAGGAGCC...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGGGCTCCTGTGAGACGTaGCCGCTGTCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGGSCET*PLSGVF
Trigger: GAAGACCCCAGACAGCGGGCACGTCTCACAGGAGCC...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACGGCTCCTGTGAGACGTaGCCGCTGTCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYGSCET*PLSGVF
Trigger: GAAGACCCCAGACAGCGGGCACGTCTCACAGGAGCC...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGGCTCCTGTGAGACGTaGCCGCTGTCTGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWGSCET*PLSGVF
Trigger: GAAGACCCCAGACAGCGGGCACGTCTCACAGGAGCC...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATAGCGCCTCTGCTCTCTaGGCTGCGGTCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHSASAL*AAVSAL
Trigger: CAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCT...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGGGAGCTGGGGCATGTGCTaGTCAGATGCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLDLGTRRVPQLAGVWVGSWGMC*SDASSW
Trigger: CCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCT...CCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR GCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATGGCTCCCAGCAGCTGTaGCGGGCTGCCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHGSQQL*RAAPSM
Trigger: CATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCC...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVCGRLQ*LCLGDA
Trigger: AGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACA...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCTTCACCTTGGTTGTaGGCGACTGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLASPWL*ATAVAL
Trigger: CAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGC...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCGCTTCACCTTGGTTGTaGGCGACTGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGASPWL*ATAVAL
Trigger: CAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGC...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGCTTCACCTTGGTTGTaGGCGACTGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGASPWL*ATAVAL
Trigger: CAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGC...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGGTAGATGCGGGCTGTaGGGTTGCACTCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPGRCGL*GCTRAS
Trigger: TGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCGTCCCCTTCCGTGTATaGCAGCTTGGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGVPFRV*QLGGHV
Trigger: CACGTGTCCACCAAGCTGCCATACACGGAAGGGGAC...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCTTCCGCTGCAACTGCTaGGCGTCCCCTTCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGFRCNC*ASPSVY
Trigger: ATACACGGAAGGGGACGCCCAGCAGTTGCAGCGGAA...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCATTCCGCTGCAACTGCTaGGCGTCCCCTTCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPFRCNC*ASPSVY
Trigger: ATACACGGAAGGGGACGCCCAGCAGTTGCAGCGGAA...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCGCCCCATGGCATCCATaGACTGGCTGCGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAAAPWHP*TGCGSG
Trigger: TCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGC...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGTGTTGCTCAGCCCCATaGCATCCATGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGCCSAP*HPWTGC
Trigger: GCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACA...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTAGCTCCCGCTGTGGCTaGTGGACACGGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLSSRCG*WTRCWA
Trigger: AGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCT...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCACCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPPGRGC*ARSSRC
Trigger: ACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGG...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAAPGRGC*ARSSRC
Trigger: ACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGG...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAATATTCCAGCCGCCTTaGCCAGGTCGGGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPIFQPP*PGRGCW
Trigger: CCAACAACCCCGACCTGGCCAAGGCGGCTGGAATAT...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCGGTTCCTATGCCTATaGCACTGCCCCGGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVARFLCL*HCPGVR
Trigger: TCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCACCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPPTSSS*GSSQGQ
Trigger: TTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGG...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCATCTCCGCTCTGTTCTTaGTCGTGGGCATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPSPLCS*SWASLG
Trigger: CCCCAGAGATGCCCACGACCAAGAACAGAGCGGAGA...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCGCTGGCGAAGCTGCTaGCACTGGACGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARRWRSC*HWTRSG
Trigger: CCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCG...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCTCCTCCACCACGCTaGCGAAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVASPPPR*RSCWHW
Trigger: CCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGA...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTCTCCTCCACCACGCTaGCGAAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPSPPPR*RSCWHW
Trigger: CCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGA...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCTTGCCGGCGTCTGGGTaGGGTGATCGAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAALPASG*GDREGP
Trigger: AGGCCCCTCTCGATCACCCCACCCAGACGCCGGCAA...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR CCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGTTGCCGGCGTCTGGGTaGGGTGATCGAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLLPASG*GDREGP
Trigger: AGGCCCCTCTCGATCACCCCACCCAGACGCCGGCAA...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR CCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCCCCCTTGTGCTTCTGTaGCCTCATCTGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVPLVLL*PHLLSF
Trigger: GAAACTGAGCAGATGAGGCCACAGAAGCACAAGGGG...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCGTCCAGGAGGCATACTaGGCACAGCCGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: CCSDASSWILISGHAGSPVQEAY*AQPAPC
Trigger: GCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGAC...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACGCATCGGCAGACCTGTaGCAGAACTGGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHASADL*QNWRVQ
Trigger: CTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGC...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGTCATGTGTAGGCAGTaGACAGGGCATCGGCAGACC +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPVMCRQ*TGHRQT
Trigger: GGTCTGCCGATGCCCTGTCCACTGCCTACACATGAC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACTGGCAGGGGTTAAGCTaGGTGCTGGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHWQGLS*VLAEEP
Trigger: TGGCTCCTCAGCCAGCACCCAGCTTAACCCCTGCCA...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGGGGCCCAGCATGGGATaGCAGGGGTTAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGGPSMG*QGLSWV
Trigger: CACCCAGCTTAACCCCTGCCATCCCATGCTGGGCCC...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCGGGGGAGGCAAGGCCTaGACTCTCGGCCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCGGGKA*TLGQLR
Trigger: TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCC...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGATTAACCCAAGGGCCTaGGCCGGGGGCGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARINPRA*AGGVLG
Trigger: GCCCAGGACGCCCCCGGCCCAGGCCCTTGGGTTAAT...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGACGAAGCTGCTGGCACTaGACGAGGAGCGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRRSCWH*TRSGRS
Trigger: ACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCG...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTTCCGGCACTTGGTCCTaGGCAGCAGCCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPSGTWS*AAAAGA
Trigger: AGCACCTGCGGCTGCTGCTCAGGACCAAGTGCCGGA...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGGGCAGGAGATGGGGATaGCATCATGGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQGRRWG*HHGMSG
Trigger: GCCGGACATACCATGATGTCATCCCCATCTCCTGCC...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCATCATCTCTTGCAGTaGCAGAGACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETHHLLQ*QRPCRG
Trigger: CCCTCTACAAGGTCTCTGTCACTGCAAGAGATGATG...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTGTCTGGGGTCTTCTaGCCAGCCGGAGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARLSGVF*PAGGLS
Trigger: GGAGAGCCCTCCGGCTGGTCAGAAGACCCCAGACAG...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCGACTTGGGCTCCTGTaGGACGTGCCCGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARRLGLL*DVPAVW
Trigger: CCAGACAGCGGGCACGTCTCACAGGAGCCCAAGTCG...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCCGACTTGGGCTCCTGTaGGACGTGCCCGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLRLGLL*DVPAVW
Trigger: CCAGACAGCGGGCACGTCTCACAGGAGCCCAAGTCG...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TGGATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGGGAGCTCTGAGTGGATaGGTTCTCCGACTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WILISGHAGSPNLPASGWGALSG*VLRLGL
Trigger: GAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCC...CCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR TCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGACCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGCACTCCGGCGAGAAGTaGAGGACTTGTCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLHSGEK*RTCPPK
Trigger: TTTGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTG...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR TCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTAGCGGGAGAAGTCCTTaGGCGCCTCTGCTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCSGRSP*APLLSA
Trigger: CGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCT...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGAAGTGCTGGTTCTaGCCATCGCTCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVGKCWF*PSLLHT
Trigger: TGTGTGGAGGAGCGATGGGCAGAACCAGCACTTCCC...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPLVVGD*SGSVSG
Trigger: CCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAA...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLLVVGD*SGSVSG
Trigger: CCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAA...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTAGCAGCAGCCGCAGGTaGTCTTGGTCCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLSSSRR*SWSPMT
Trigger: TGTCATCGGGGACCAAGAGCACCTGCGGCTGCTGCT...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGAGCAGCAGCCGCAGGTaGTCTTGGTCCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWSSSRR*SWSPMT
Trigger: TGTCATCGGGGACCAAGAGCACCTGCGGCTGCTGCT...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGAGCAGCAGCCGCAGGTaGTCTTGGTCCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLSSSRR*SWSPMT
Trigger: TGTCATCGGGGACCAAGAGCACCTGCGGCTGCTGCT...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTTCACACACCAACTTTaGCATCTGGACAACATTAGG +
Preference number: 4 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAFTHQL*HLDNIR
Trigger: CCTAATGTTGTCCAGATGGCAAAGTTGGTGTGTGAA...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCCCTTGTTGCGGAAGTTaGAGTACACAGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVPCCGS*STQIRS
Trigger: GGACCGAATCTGTGTACTGCAACTTCCGCAACAAGG...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGAGCCGCCGCCCCCACTaGCATTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWSRRPH*HSPSCP
Trigger: AGGACAAGATGGAGAATGGCAGTGGGGGCGGCGGCT...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCTGTTGGGCTTCTTGTTaGTCAGCCCCATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPCWASC*SAPWHP
Trigger: TGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACA...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGCTATGCCTATGGCACTaGCCCGGCGTCCGAATCTAC +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQLCLWH*PGVRIY
Trigger: GTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAG...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACG +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSRCQWR*CGGSRT
Trigger: CGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCG...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGAGCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPELERL*SLRCGL
Trigger: GAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGCTC...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR GCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLPRWRS*WHWTRS
Trigger: GCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGG...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGCCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRPRWRS*WHWTRS
Trigger: GCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGG...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: WILISGHAGSPNLPASGWGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...CCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR GCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATTGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTTGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCATGGACGGCTCTGCCCTaGAGAGACAGCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPWTALP*RDSPDG
Trigger: CCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCA...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCCACTGAGCAATCCCTaGCCCAGCCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLPLSNP*PSPDPQ
Trigger: CTGGGGGTCTGGGCTGGGGCAGGGATTGCTCAGTGG...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPTSSLC*LQGLSS
Trigger: AGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGT...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCGTCCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPVLERL*SLRCGL
Trigger: GAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGAC...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTGTCCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSVLERL*SLRCGL
Trigger: GAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGAC...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGAGCCGCAGGTGCTCTTaGTCCCCGATGACATCGTAC +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVSRRCS*SPMTSY
Trigger: GTACGATGTCATCGGGGACCAAGAGCACCTGCGGCT...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAGCCGCAGGTGCTCTTaGTCCCCGATGACATCGTAC +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQSRRCS*SPMTSY
Trigger: GTACGATGTCATCGGGGACCAAGAGCACCTGCGGCT...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACGTCCCCTTCCGTGTATaGCAGCTTGGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHVPFRV*QLGGHV
Trigger: CACGTGTCCACCAAGCTGCCATACACGGAAGGGGAC...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLRHAGS*TRSCRA
Trigger: TGCCCGACATGATCGCGTCCAACTTCCTGCATGCCT...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGRHAGS*TRSCRA
Trigger: TGCCCGACATGATCGCGTCCAACTTCCTGCATGCCT...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCATGGCATCCATGGACTaGCTGCGGCTCCGGATGACC +
Preference number: 4 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSMASMD*LRLRMT
Trigger: GGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCAT...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTATGGCATCCATGGACTaGCTGCGGCTCCGGATGACC +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPMASMD*LRLRMT
Trigger: GGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCAT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGTGTTGCTCAGCCCCATaGCATCCATGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVCCSAP*HPWTGC
Trigger: GCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACA...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGTGGTGGACACGGTGTTaGGCTTCTTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLWWTRC*ASCCSA
Trigger: GGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCA...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGTGGTGGACACGGTGTTaGGCTTCTTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGWWTRC*ASCCSA
Trigger: GGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCA...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCTGGTGGACACGGTGTTaGGCTTCTTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGWWTRC*ASCCSA
Trigger: GGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCA...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTTCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLSRCGW*TRCWAS
Trigger: AGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGA...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGTCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGSRCGW*TRCWAS
Trigger: AGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGA...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATTCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHSRCGW*TRCWAS
Trigger: AGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGA...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGATATTCCAGCCGCCTTaGCCAGGTCGGGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: WILISGHAGSPNLPASGWIFQPP*PGRGCW
Trigger: CCAACAACCCCGACCTGGCCAAGGCGGCTGGAATAT...CCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCTGTTCTCGATGCCAATaGCGCTGCTGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPCSRCQ*RCCGGS
Trigger: GCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACA...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCTGTTCTCGATGCCAATaGCGCTGCTGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: CCSDASSWILISGHAGSPCSRCQ*RCCGGS
Trigger: GCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACA...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGGACGTGCCCGCTGTCTaGGGTCTTCTGACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRDVPAV*GLLTSR
Trigger: CCGGCTGGTCAGAAGACCCCAGACAGCGGGCACGTC...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGGGCTGGGGAGCTCTGAGTaGATGAGTTCTCCGACTTGG +
Preference number: 4 (lower is better)
Translates to: DLDLGTRRVPQLAGVWVGLGSSE*MSSPTW
Trigger: CCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAG...CCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCACTCTGTTCTTGGTCGTaGGCATCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPLCSWS*ASLGSS
Trigger: AGAGCTCCCCAGAGATGCCCACGACCAAGAACAGAG...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCGAAGCTGCTGGCACTaGACGAGGAGCGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCRSCWH*TRSGSL
Trigger: CAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCG...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR CCA 90 bp CGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCTCCTCCACCACGCTaGCGAAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RLPTQCSLPHISHPPCAASPPPR*RSCWHW
Trigger: CCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGA...GGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCGACAGCCCAGATGGGTaGGCCATGGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLDSPDG*AMGRVG
Trigger: CCCCACCCTCCCCATGGCCCACCCATCTGGGCTGTC...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTGGCAGGGGTTAAGCTaGGTGCTGGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAWQGLS*VLAEEP
Trigger: TGGCTCCTCAGCCAGCACCCAGCTTAACCCCTGCCA...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGGGGCCCAGCATGGGATaGCAGGGGTTAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWGPSMG*QGLSWV
Trigger: CACCCAGCTTAACCCCTGCCATCCCATGCTGGGCCC...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTGGGCCCAGCATGGGATaGCAGGGGTTAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSGPSMG*QGLSWV
Trigger: CACCCAGCTTAACCCCTGCCATCCCATGCTGGGCCC...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATG +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWLRLLA*RAQHGM
Trigger: CATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTCGAAGCTGCTGGCACTaGACGAGGAGCGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCARSCWH*TRSGRS
Trigger: ACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCG...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGACAGGTCTAGTGCCTaGGGGAAGTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVDRSSA*GKCWFC
Trigger: GCAGAACCAGCACTTCCCTCAGGCACTAGACCTGTC...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTGACAGGTCTAGTGCCTaGGGGAAGTGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGDRSSA*GKCWFC
Trigger: GCAGAACCAGCACTTCCCTCAGGCACTAGACCTGTC...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGAGTCCTCCTCTGTTTTaGGGGGCGGCGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRSPPLF*GAAGRS
Trigger: GCTCCTTCCCGCCGCCCCTCAAAACAGAGGAGGACT...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLSRGCW*FRGWCP
Trigger: AGGGCACCAACCACGAAATCACCAGCATCCCCGAGA...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYSRGCW*FRGWCP
Trigger: AGGGCACCAACCACGAAATCACCAGCATCCCCGAGA...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPSRGCW*FRGWCP
Trigger: AGGGCACCAACCACGAAATCACCAGCATCCCCGAGA...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTGGCAGGAGATGGGGATaGCATCATGGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAGRRWG*HHGMSG
Trigger: GCCGGACATACCATGATGTCATCCCCATCTCCTGCC...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTAGAACCGATCCACATTaGCGTCTTCACACACCAACT +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETRTDPH*RLHTPT
Trigger: AGTTGGTGTGTGAAGACGTCAATGTGGATCGGTTCT...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCAGAACCGATCCACATTaGCGTCTTCACACACCAACT +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVRTDPH*RLHTPT
Trigger: AGTTGGTGTGTGAAGACGTCAATGTGGATCGGTTCT...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATACTCAGGCCCCTTCCTaGACACAGCGGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHTQAPS*TQRGPG
Trigger: TCCCGGACCCCGCTGTGTTCAGGAAGGGGCCTGAGT...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCCCCAGGAATAAGCAATaGTATTCCAGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGPRNKQ*YSSRLG
Trigger: GCCAAGGCGGCTGGAATATCATTGCTTATTCCTGGG...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCTGTCTGGGGTCTTCTaGCCAGCCGGAGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSLSGVF*PAGGLS
Trigger: GGAGAGCCCTCCGGCTGGTCAGAAGACCCCAGACAG...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CATGTGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCTGTCTGGGGTCTTCTaGCCAGCCGGAGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HVLLRCFQLDLDLGTRRVLSGVF*PAGGLS
Trigger: GGAGAGCCCTCCGGCTGGTCAGAAGACCCCAGACAG...GACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR TCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGGAGCTCTGAGTGGATaGGTTCTCCGACTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWGALSG*VLRLGL
Trigger: GAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCC...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGGCCACGTGCTATAGATaGAGGAGTCCCGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGATCYR*RSPACG
Trigger: CCCACAAGCGGGACTCCTTCATCTATAGCACGTGGC...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCGCCACGTGCTATAGATaGAGGAGTCCCGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAATCYR*RSPACG
Trigger: CCCACAAGCGGGACTCCTTCATCTATAGCACGTGGC...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTGCCACGTGCTATAGATaGAGGAGTCCCGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPATCYR*RSPACG
Trigger: CCCACAAGCGGGACTCCTTCATCTATAGCACGTGGC...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGCCACGTGCTATAGATaGAGGAGTCCCGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWATCYR*RSPACG
Trigger: CCCACAAGCGGGACTCCTTCATCTATAGCACGTGGC...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCALPAGS*SRDTQG
Trigger: ACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAG...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWLPAGS*SRDTQG
Trigger: ACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGGCTGGCCTTTGGCGTaGCGCCTAAAAAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVGWPLA*RLKSVT
Trigger: GGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCC...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTAGCGGGAGAAGTCCTTaGGCGCCTCTGCTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: TRLPTQCSLPHISHPPCASGRSP*APLLSA
Trigger: CGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCT...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCAGCGGGAGAAGTCCTTaGGCGCCTCTGCTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGSGRSP*APLLSA
Trigger: CGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCT...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCATGTGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGCACTCCGGCGAGAAGTaGAGGACTTGTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: GMCCSDASSWILISGHAGHSGEK*RTCPPR
Trigger: GCGGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTG...CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471600.6
CDS-3UTR GCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTGGGAAGTGCTGGTTCTaGCCATCGCTCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAGKCWF*PSLLHT
Trigger: TGTGTGGAGGAGCGATGGGCAGAACCAGCACTTCCC...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCCGCCCCAAGACCTCGTaGACGCTCGGGTATGGAATG +
Preference number: 4 (lower is better)
Translates to: CCSDASSWILISGHAGSPRPKTS*TLGYGM
Trigger: CATTCCATACCCGAGCGTGCACGAGGTCTTGGGGCG...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR GCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTCGCCCCAAGACCTCGTaGACGCTCGGGTATGGAATG +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSRPKTS*TLGYGM
Trigger: CATTCCATACCCGAGCGTGCACGAGGTCTTGGGGCG...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCTGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAACGLWG*TRASPW
Trigger: CCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCA...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCTGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPCGLWG*TRASPW
Trigger: CCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCA...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTAGTGCTTCCGGTAGATaGGGGCTGTGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASSASGR*GLWGCT
Trigger: AGTGCAACCCCACAGCCCGCATCTACCGGAAGCACT...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCCTTGTTGCGGAAGTTaGAGTACACAGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWPCCGS*STQIRS
Trigger: GGACCGAATCTGTGTACTGCAACTTCCGCAACAAGG...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTAGCCGCCGCCCCCACTaGCATTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSSRRPH*HSPSCP
Trigger: AGGACAAGATGGAGAATGGCAGTGGGGGCGGCGGCT...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGAGCCGCCGCCCCCACTaGCATTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLSRRPH*HSPSCP
Trigger: AGGACAAGATGGAGAATGGCAGTGGGGGCGGCGGCT...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTCTATGCCTATGGCACTaGCCCGGCGTCCGAATCTAC +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPLCLWH*PGVRIY
Trigger: GTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAG...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCCTTCCACGGTTCCTATaGCTATGGCACTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RLPTQCSLPHISHPPCAALPRFL*LWHCPG
Trigger: GCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAG...GGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGAAAGCAGGTGCTGAGTaGCATCGGAGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLKAGAE*HRSCRH
Trigger: GTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTT...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR GCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCCTGTATGTTCTCGATaGCAATGGCGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVPVCSR*QWRCCG
Trigger: GCCGCAGCAGCGCCATTGGCATCGAGAACATACAGG...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCTCTCCCTCTTCTCCTaGACCTCCTGTATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGLSLFS*TSCMFS
Trigger: CGAGAACATACAGGAGGTGCAGGAGAAGAGGGAGAG...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCTCTCCCTCTTCTCCTaGACCTCCTGTATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGLSLFS*TSCMFS
Trigger: CGAGAACATACAGGAGGTGCAGGAGAAGAGGGAGAG...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTAGCTGGGGCATGTGCTaGTCAGATGCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCASWGMC*SDASSW
Trigger: CCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCT...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCAGCTGGGGCATGTGCTaGTCAGATGCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVASWGMC*SDASSW
Trigger: CCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCT...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCAGGTCTGGACGGCTCTaGCCTGCAGAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLRSGRL*PAETAQ
Trigger: CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCT...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVTSSLC*LQGLSS
Trigger: AGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGT...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCGGCTCCCAACCCAGTaGTCACTCCCCCACATATCA +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWRLPTQ*SLPHIS
Trigger: TGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCGGCTCCCAACCCAGTaGTCACTCCCCCACATATCA +
Preference number: 4 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGRLPTQ*SLPHIS
Trigger: TGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCGTGCACGCTCGGGTATaGAATGTAGTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGVHARV*NVVLLC
Trigger: ACAGAGGAGGACTACATTCCATACCCGAGCGTGCAC...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGTGCACGCTCGGGTATaGAATGTAGTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGVHARV*NVVLLC
Trigger: ACAGAGGAGGACTACATTCCATACCCGAGCGTGCAC...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCATGCTGGTGATTTCGTaGTTGGTGCCCTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGMLVIS*LVPSIQ
Trigger: CTGGATTGAGGGCACCAACCACGAAATCACCAGCAT...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTGCTTCACCTTGGTTGTaGGCGACTGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAASPWL*ATAVAL
Trigger: CAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGC...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTGCTTCACCTTGGTTGTaGGCGACTGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGASPWL*ATAVAL
Trigger: CAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGC...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATGGTAGATGCGGGCTGTaGGGTTGCACTCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHGRCGL*GCTRAS
Trigger: TGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACC...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGTAGATGCGGGCTGTaGGGTTGCACTCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASGRCGL*GCTRAS
Trigger: TGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACC...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTAGTGAGAAGACAAGGTaGCCGAGGGCAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASSEKTR*PRAASS
Trigger: ACTGGACGCTGCCCTCGGCCACCTTGTCTTCTCACT...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGAGCCGCAGGTGCTCTTaGTCCCCGATGACATCGTAC +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWSRRCS*SPMTSY
Trigger: GTACGATGTCATCGGGGACCAAGAGCACCTGCGGCT...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGAGCCGCAGGTGCTCTTaGTCCCCGATGACATCGTAC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVSRRCS*SPMTSY
Trigger: GTACGATGTCATCGGGGACCAAGAGCACCTGCGGCT...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTTCCGCTGCAACTGCTaGGCGTCCCCTTCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPFRCNC*ASPSVY
Trigger: ATACACGGAAGGGGACGCCCAGCAGTTGCAGCGGAA...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVRHAGS*TRSCRA
Trigger: TGCCCGACATGATCGCGTCCAACTTCCTGCATGCCT...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCAAGCCCATCATGGACTaGCTGTGGATGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPKPIMD*LWMCSS
Trigger: GGAACTACACATCCACAGCCAGTCCATGATGGGCTT...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCAAGCCCATCATGGACTaGCTGTGGATGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGKPIMD*LWMCSS
Trigger: GGAACTACACATCCACAGCCAGTCCATGATGGGCTT...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTATGGCATCCATGGACTaGCTGCGGCTCCGGATGACC +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSMASMD*LRLRMT
Trigger: GGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCAT...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGTTGCTCAGCCCCATaGCATCCATGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLCCSAP*HPWTGC
Trigger: GCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACA...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTTGCTCAGCCCCATaGCATCCATGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPCCSAP*HPWTGC
Trigger: GCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACA...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTATATTCCAGCCGCCTTaGCCAGGTCGGGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPIFQPP*PGRGCW
Trigger: CCAACAACCCCGACCTGGCCAAGGCGGCTGGAATAT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCATATTCCAGCCGCCTTaGCCAGGTCGGGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAIFQPP*PGRGCW
Trigger: CCAACAACCCCGACCTGGCCAAGGCGGCTGGAATAT...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLPTSSS*GSSQGQ
Trigger: TTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGG...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGCTGGGGAGCTCTGAGTaGATGAGTTCTCCGACTTGG +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVLGSSE*MSSPTW
Trigger: CCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAG...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACCTGGGGAGCTCTGAGTaGATGAGTTCTCCGACTTGG +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHLGSSE*MSSPTW
Trigger: CCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAG...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGCTCTGTTCTTGGTCGTaGGCATCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVLCSWS*ASLGSS
Trigger: AGAGCTCCCCAGAGATGCCCACGACCAAGAACAGAG...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGCTCTGTTCTTGGTCGTaGGCATCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQLCSWS*ASLGSS
Trigger: AGAGCTCCCCAGAGATGCCCACGACCAAGAACAGAG...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTCTCCGCTCTGTTCTTaGTCGTGGGCATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYSPLCS*SWASLG
Trigger: CCCCAGAGATGCCCACGACCAAGAACAGAGCGGAGA...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTCCGCTCTGTTCTTaGTCGTGGGCATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCASPLCS*SWASLG
Trigger: CCCCAGAGATGCCCACGACCAAGAACAGAGCGGAGA...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCGCTGGCGAAGCTGCTaGCACTGGACGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLRWRSC*HWTRSG
Trigger: CCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 4 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCCCCCTTGTGCTTCTGTaGCCTCATCTGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGPLVLL*PHLLSF
Trigger: GAAACTGAGCAGATGAGGCCACAGAAGCACAAGGGG...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCACCCCTTGTGCTTCTGTaGCCTCATCTGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPPLVLL*PHLLSF
Trigger: GAAACTGAGCAGATGAGGCCACAGAAGCACAAGGGG...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCAGCAGAACCCAAATTaGAAACCAGGACCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLQQNPN*KPGPGS
Trigger: GGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTG...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGTCCAGGAGGCATACTaGGCACAGCCGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPVQEAY*AQPAPC
Trigger: GCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGAC...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTCATGTGTAGGCAGTaGACAGGGCATCGGCAGACC +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASVMCRQ*TGHRQT
Trigger: GGTCTGCCGATGCCCTGTCCACTGCCTACACATGAC...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTTGGCAGGGGTTAAGCTaGGTGCTGGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCWQGLS*VLAEEP
Trigger: TGGCTCCTCAGCCAGCACCCAGCTTAACCCCTGCCA...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCGGGTCCGAGGGAGGGTaGCCTCGGTTGGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSGSEGG*PRLAEV
Trigger: TACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCC...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGAGGGAGCCACCTCACTaGGGAGCTGCCCCCACTAGT +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARREPPH*GAAPTS
Trigger: ACTAGTGGGGGCAGCTCCCCAGTGAGGTGGCTCCCT...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471600.6
CDS-3UTR TCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATTCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHSRGCW*FRGWCP
Trigger: AGGGCACCAACCACGAAATCACCAGCATCCCCGAGA...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGCCAGTGAGTAGTAATTaGAATGCTCCTTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAPVSSN*NAPCRE
Trigger: TTCTCGGCAAGGAGCATTTCAATTACTACTCACTGG...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGGAGGGCAGCGTCCAGTaGGTAGTAATTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGEGSVQ*VVIEML
Trigger: GAGCATTTCAATTACTACTCACTGGACGCTGCCCTC...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAGACATCGTACTTGAGTaGGAAGACAAGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRDIVLE*EDKVAE
Trigger: CTCGGCCACCTTGTCTTCTCACTCAAGTACGATGTC...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGTCCGGCACTTGGTCCTaGGCAGCAGCCGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGSGTWS*AAAAGA
Trigger: AGCACCTGCGGCTGCTGCTCAGGACCAAGTGCCGGA...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCAGAACCGATCCACATTaGCGTCTTCACACACCAACT +
Preference number: 4 (lower is better)
Translates to: VAELEGPGGILGTAGSLPRTDPH*RLHTPT
Trigger: AGTTGGTGTGTGAAGACGTCAATGTGGATCGGTTCT...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCAGAACCGATCCACATTaGCGTCTTCACACACCAACT +
Preference number: 4 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLARTDPH*RLHTPT
Trigger: AGTTGGTGTGTGAAGACGTCAATGTGGATCGGTTCT...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGGGTTTCCTCATTGGTGCTaGAGAGTTCTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: DLDLGTRRVPQLAGVWVGFPHWC*RVLPRR
Trigger: CCTCCGAGGAAGAACTCTTCAGCACCAATGAGGAAA...CCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR TCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCCATCATCTCTTGCAGTaGCAGAGACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGHHLLQ*QRPCRG
Trigger: CCCTCTACAAGGTCTCTGTCACTGCAAGAGATGATG...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTATATGGCCTCCGTCCTaGGAGCGAGCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: VLLWPHLLSFTFRGGGPAIWPPS*ERAENS
Trigger: GCTGTTCTCTGCTCGCTCTCAGGACGGAGGCCATAT...AGCCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR TCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGGGAGCTCTGAGTGGATaGGTTCTCCGACTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWGALSG*VLRLGL
Trigger: GAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCC...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCGCCACGTGCTATAGATaGAGGAGTCCCGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CCSDASSWILISGHAGSPATCYR*RSPACG
Trigger: CCCACAAGCGGGACTCCTTCATCTATAGCACGTGGC...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR TCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCGTCTGCCTGGGCTTaGCACGGCACCTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLSSAWA*HGTFPL
Trigger: CAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGA...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGTCCTGCTTCCACTaGGCAATCCCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSQSCFH*AIPAPA
Trigger: GGCTGGGGCAGGGATTGCTCAGTGGAAGCAGGACTG...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACGGCTGGCCTTTGGCGTaGCGCCTAAAAAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHGWPLA*RLKSVT
Trigger: GGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCC...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCTGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGCGLWG*TRASPW
Trigger: CCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCA...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCAGTGCTTCCGGTAGATaGGGGCTGTGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAASASGR*GLWGCT
Trigger: AGTGCAACCCCACAGCCCGCATCTACCGGAAGCACT...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCCTTGTTGCGGAAGTTaGAGTACACAGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGPCCGS*STQIRS
Trigger: GGACCGAATCTGTGTACTGCAACTTCCGCAACAAGG...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGATGTCGTTCCCGATGTaGCGCTTCCGCTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLMSFPM*RFRCNC
Trigger: GCAGTTGCAGCGGAAGCGGCACATCGGGAACGACAT...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTAGCCGCCGCCCCCACTaGCATTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPSRRPH*HSPSCP
Trigger: AGGACAAGATGGAGAATGGCAGTGGGGGCGGCGGCT...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGTGTTGGGCTTCTTGTTaGTCAGCCCCATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVCWASC*SAPWHP
Trigger: TGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACA...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCAAAGCAGGTGCTGAGTaGCATCGGAGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLKAGAE*HRSCRH
Trigger: GTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTT...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR GCA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGTGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGC +
Preference number: 4 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWCQWRC*GGSRTG
Trigger: GCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCA...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTGTATGTTCTCGATaGCAATGGCGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWPVCSR*QWRCCG
Trigger: GCCGCAGCAGCGCCATTGGCATCGAGAACATACAGG...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLAFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAAGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGCAGAGGTCTCGTCTaGCTGGGCTTGACACGGCAC +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPGRGLV*LGLTRH
Trigger: GTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWTSSLC*LQGLSS
Trigger: AGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGT...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACATCCTCCTTGTGCTaGCTCCAGGGGCTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QWTGHRQTCGRTGGSRRHTSSLC*LQGLSS
Trigger: AGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGT...ATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCATGCTGGTGATTTCGTaGTTGGTGCCCTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGMLVIS*LVPSIQ
Trigger: CTGGATTGAGGGCACCAACCACGAAATCACCAGCAT...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRCGRLQ*LCLGDA
Trigger: AGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACA...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLCGRLQ*LCLGDA
Trigger: AGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACA...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: TRLPTQCSLPHISHPPCACGRLQ*LCLGDA
Trigger: AGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACA...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGAGTGAGAAGACAAGGTaGCCGAGGGCAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWSEKTR*PRAASS
Trigger: ACTGGACGCTGCCCTCGGCCACCTTGTCTTCTCACT...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGAGCCGCAGGTGCTCTTaGTCCCCGATGACATCGTAC +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLSRRCS*SPMTSY
Trigger: GTACGATGTCATCGGGGACCAAGAGCACCTGCGGCT...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTGTCCCCTTCCGTGTATaGCAGCTTGGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSVPFRV*QLGGHV
Trigger: CACGTGTCCACCAAGCTGCCATACACGGAAGGGGAC...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCTTCCGCTGCAACTGCTaGGCGTCCCCTTCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCFRCNC*ASPSVY
Trigger: ATACACGGAAGGGGACGCCCAGCAGTTGCAGCGGAA...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGTCAGCAAAAATTCCTaGAACTCAGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPVSKNS*NSGPFL
Trigger: CAGGAAGGGGCCTGAGTTCCAGGAATTTTTGCTGAC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTATGGCATCCATGGACTaGCTGCGGCTCCGGATGACC +
Preference number: 4 (lower is better)
Translates to: TRLPTQCSLPHISHPPCAMASMD*LRLRMT
Trigger: GGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCAT...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: CCSDASSWILISGHAGSPPTSSS*GSSQGQ
Trigger: TTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGG...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSPTSSS*GSSQGQ
Trigger: TTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGG...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCATGTTCTCGATGCCAATaGCGCTGCTGCGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPCSRCQ*RCCGGS
Trigger: GCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACA...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTCTGGGGAGCTCTGAGTaGATGAGTTCTCCGACTTGG +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLLGSSE*MSSPTW
Trigger: CCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAG...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCTCTGTTCTTGGTCGTaGGCATCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLLCSWS*ASLGSS
Trigger: AGAGCTCCCCAGAGATGCCCACGACCAAGAACAGAG...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTCTCTGTTCTTGGTCGTaGGCATCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPLCSWS*ASLGSS
Trigger: AGAGCTCCCCAGAGATGCCCACGACCAAGAACAGAG...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCTCCTCCACCACGCTaGCGAAGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLSPPPR*RSCWHW
Trigger: CCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGA...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTAAGGAGTCCCGCTTGTaGGGTGTTCCTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLKESRL*GVPEDD
Trigger: GTCATCCTCAGGAACACCCCACAAGCGGGACTCCTT...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCATCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 4 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGGGGCAGCCCACGGGCTaGTGTTGGTCTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGGQPTG*CWSSGQ
Trigger: CTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCC...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTCAGCAGAACCCAAATTaGAAACCAGGACCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAQQNPN*KPGPGS
Trigger: GGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTG...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSDLWQN*RVQEAY
Trigger: GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTC...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHDLWQN*RVQEAY
Trigger: GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTC...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCDLWQN*RVQEAY
Trigger: GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTC...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCGCATCGGCAGACCTGTaGCAGAACTGGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPASADL*QNWRVQ
Trigger: CTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGC...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCATCGGCAGACCTGTaGCAGAACTGGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TRLPTQCSLPHISHPPCAASADL*QNWRVQ
Trigger: CTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGC...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATGGGCCCAGCATGGGATaGCAGGGGTTAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHGPSMG*QGLSWV
Trigger: CACCCAGCTTAACCCCTGCCATCCCATGCTGGGCCC...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATTCCAAAATGGGTATTaGGGCCAGGAGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRFQNGY*GQEAGL
Trigger: AAGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAA...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCTTCCAAAATGGGTATTaGGGCCAGGAGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLFQNGY*GQEAGL
Trigger: AAGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAA...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCGAAGCTGCTGGCACTaGACGAGGAGCGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLRSCWH*TRSGRS
Trigger: ACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCG...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCGTTCTTAGGGTAGAGTaGAGGAGTATAGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGVLRVE*RSIGGN
Trigger: GTTCCCTCCTATACTCCTTCACTCTACCCTAAGAAC...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGTCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRSRGCW*FRGWCP
Trigger: AGGGCACCAACCACGAAATCACCAGCATCCCCGAGA...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGTTTCCTCATTGGTGCTaGAGAGTTCTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVFPHWC*RVLPRR
Trigger: CCTCCGAGGAAGAACTCTTCAGCACCAATGAGGAAA...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACTTTCCTCATTGGTGCTaGAGAGTTCTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHFPHWC*RVLPRR
Trigger: CCTCCGAGGAAGAACTCTTCAGCACCAATGAGGAAA...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCCCAGGAATAAGCAATaGTATTCCAGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLPRNKQ*YSSRLG
Trigger: GCCAAGGCGGCTGGAATATCATTGCTTATTCCTGGG...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCATATGGCCTCCGTCCTaGGAGCGAGCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLIWPPS*ERAENS
Trigger: GCTGTTCTCTGCTCGCTCTCAGGACGGAGGCCATAT...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR TCA 90 bp CATGTGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCAGGGACAATCAGTaGCAGGCCCCAAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HVLLRCFQLDLDLGTRRVPRDNQ*QAPKQV
Trigger: CACCTGCTTTGGGGCCTGTCACTGATTGTCCCTGGG...GACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR TCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTGGAGCTCTGAGTGGATaGGTTCTCCGACTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPGALSG*VLRLGL
Trigger: GAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCC...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCATCTCTGGGGAGCTCTaGGTGGATGAGTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCISGEL*VDEFSD
Trigger: GTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGAT...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCATCTCTGGGGAGCTCTaGGTGGATGAGTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: CCSDASSWILISGHAGSPISGEL*VDEFSD
Trigger: GTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGAT...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR TCA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPLPAGS*SRDTQG
Trigger: ACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAG...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTGGCTGGCCTTTGGCGTaGCGCCTAAAAAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPGWPLA*RLKSVT
Trigger: GGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCC...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCCCAGGGACAATCAGTaGCTCTTCCACGGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAPRDNQ*LFHGSY
Trigger: ATAGGAACCGTGGAAGAGTCACTGATTGTCCCTGGG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGGGGAAGTGCTGGTTCTaGCCATCGCTCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARGKCWF*PSLLHT
Trigger: TGTGTGGAGGAGCGATGGGCAGAACCAGCACTTCCC...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCACGCCCCAAGACCTCGTaGACGCTCGGGTATGGAATG +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPRPKTS*TLGYGM
Trigger: CATTCCATACCCGAGCGTGCACGAGGTCTTGGGGCG...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCGCCCCAAGACCTCGTaGACGCTCGGGTATGGAATG +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHRPKTS*TLGYGM
Trigger: CATTCCATACCCGAGCGTGCACGAGGTCTTGGGGCG...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTAGTGCTTCCGGTAGATaGGGGCTGTGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPSASGR*GLWGCT
Trigger: AGTGCAACCCCACAGCCCGCATCTACCGGAAGCACT...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGTGCTTCCGGTAGATaGGGGCTGTGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRSASGR*GLWGCT
Trigger: AGTGCAACCCCACAGCCCGCATCTACCGGAAGCACT...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTTTCACACACCAACTTTaGCATCTGGACAACATTAGG +
Preference number: 4 (lower is better)
Translates to: PLHGGRGRQGLDSRPAETFTHQL*HLDNIR
Trigger: CCTAATGTTGTCCAGATGGCAAAGTTGGTGTGTGAA...AGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCCTATGCCTATGGCACTaGCCCGGCGTCCGAATCTAC +
Preference number: 4 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLLCLWH*PGVRIY
Trigger: GTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAG...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCCTGTATGTTCTCGATaGCAATGGCGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARPVCSR*QWRCCG
Trigger: GCCGCAGCAGCGCCATTGGCATCGAGAACATACAGG...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCTGTATGTTCTCGATaGCAATGGCGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPPVCSR*QWRCCG
Trigger: GCCGCAGCAGCGCCATTGGCATCGAGAACATACAGG...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCCATGTGCTGCTCAGATaGTTCCAGCTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGHVLLR*FQLDLD
Trigger: ATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCAGCTGGGGCATGTGCTaGTCAGATGCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLSWGMC*SDASSW
Trigger: CCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCT...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCATCACATCCTCCTTGTaGTGCCTCCAGGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: RLPTQCSLPHISHPPCAAITSSL*CLQGLS
Trigger: GCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGAT...GGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCCGGCTCCCAACCCAGTaGTCACTCCCCCACATATCA +
Preference number: 4 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGRLPTQ*SLPHIS
Trigger: TGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGAAGAAGCTTCACCTTGGTTGTaGGCGACTGCAGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSRDLKKQGRVIGGPWEEASPWL*ATAVAL
Trigger: CAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGC...TTCTTCCCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTACTCGAGCTTCACCTTaGTTGTGGGCGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VLLWPHLLSFTFRGGGPATRASP*LWATAV
Trigger: CACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGT...AGCCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATACTCGAGCTTCACCTTaGTTGTGGGCGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHTRASP*LWATAV
Trigger: CACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGT...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGATGGGGATGACATCATaGTATGTCCGGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVMGMTS*YVRHLV
Trigger: GACCAAGTGCCGGACATACCATGATGTCATCCCCAT...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGAAGAAGTCCCCTTCCGTGTATaGCAGCTTGGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: GSRDLKKQGRVIGGPWEEVPFRV*QLGGHV
Trigger: CACGTGTCCACCAAGCTGCCATACACGGAAGGGGAC...TTCTTCCCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCGTCCCCTTCCGTGTATaGCAGCTTGGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLVPFRV*QLGGHV
Trigger: CACGTGTCCACCAAGCTGCCATACACGGAAGGGGAC...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGAGTGTTCTCATCCTaGAAGACCACAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASGVFSS*KTTATM
Trigger: CATCGTGGCTGTGGTCTTCCAGGATGAGAACACTCC...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGGAGTGTTCTCATCCTaGAAGACCACAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLGVFSS*KTTATM
Trigger: CATCGTGGCTGTGGTCTTCCAGGATGAGAACACTCC...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGGTCAGCAAAAATTCCTaGAACTCAGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQVSKNS*NSGPFL
Trigger: CAGGAAGGGGCCTGAGTTCCAGGAATTTTTGCTGAC...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGTGTTGCTCAGCCCCATaGCATCCATGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARCCSAP*HPWTGC
Trigger: GCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACA...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTTGGTGGACACGGTGTTaGGCTTCTTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLPGLDTAPSPCASVASSWWTRC*ASCCSA
Trigger: GGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCA...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGATATTCCAGCCGCCTTaGCCAGGTCGGGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRIFQPP*PGRGCW
Trigger: CCAACAACCCCGACCTGGCCAAGGCGGCTGGAATAT...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGATATTCCAGCCGCCTTaGCCAGGTCGGGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARIFQPP*PGRGCW
Trigger: CCAACAACCCCGACCTGGCCAAGGCGGCTGGAATAT...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCTGGGGAGCTCTGAGTaGATGAGTTCTCCGACTTGG +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAALGSSE*MSSPTW
Trigger: CCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAG...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCTCTCCGCTCTGTTCTTaGTCGTGGGCATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLSPLCS*SWASLG
Trigger: CCCCAGAGATGCCCACGACCAAGAACAGAGCGGAGA...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCAAGGAGTCCCGCTTGTaGGGTGTTCCTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAAKESRL*GVPEDD
Trigger: GTCATCCTCAGGAACACCCCACAAGCGGGACTCCTT...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTAAGGAGTCCCGCTTGTaGGGTGTTCCTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCKESRL*GVPEDD
Trigger: GTCATCCTCAGGAACACCCCACAAGCGGGACTCCTT...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCCCCTTGTGCTTCTGTaGCCTCATCTGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLPLVLL*PHLLSF
Trigger: GAAACTGAGCAGATGAGGCCACAGAAGCACAAGGGG...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTCCCCTTGTGCTTCTGTaGCCTCATCTGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASPLVLL*PHLLSF
Trigger: GAAACTGAGCAGATGAGGCCACAGAAGCACAAGGGG...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCAGCAGAACCCAAATTaGAAACCAGGACCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWQQNPN*KPGPGS
Trigger: GGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTG...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCAGCAGAACCCAAATTaGAAACCAGGACCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLQQNPN*KPGPGS
Trigger: GGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTG...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCCAGCAGAACCCAAATTaGAAACCAGGACCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPQQNPN*KPGPGS
Trigger: GGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTG...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCAGTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: GSGQGIGRPVAELEGPGGVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...GCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGGTCATGTGTAGGCAGTaGACAGGGCATCGGCAGACC +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRVMCRQ*TGHRQT
Trigger: GGTCTGCCGATGCCCTGTCCACTGCCTACACATGAC...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCACTGAGACTCTTGGCCTaGAGGGCCCAGCATGGGATG +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPLRLLA*RAQHGM
Trigger: CATCCCATGCTGGGCCCTCCAGGCCAAGAGTCTCAG...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTTCCAAAATGGGTATTaGGGCCAGGAGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPFQNGY*GQEAGL
Trigger: AAGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAA...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGTTCCAAAATGGGTATTaGGGCCAGGAGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVFQNGY*GQEAGL
Trigger: AAGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAA...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCGAAGCTGCTGGCACTaGACGAGGAGCGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSRSCWH*TRSGRS
Trigger: ACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCG...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCGAGGGCAGCGTCCAGTaGGTAGTAATTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSEGSVQ*VVIEML
Trigger: GAGCATTTCAATTACTACTCACTGGACGCTGCCCTC...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGCAGGAGATGGGGATaGCATCATGGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPGRRWG*HHGMSG
Trigger: GCCGGACATACCATGATGTCATCCCCATCTCCTGCC...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAGAACCGATCCACATTaGCGTCTTCACACACCAACT +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQRTDPH*RLHTPT
Trigger: AGTTGGTGTGTGAAGACGTCAATGTGGATCGGTTCT...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTCATCATCTCTTGCAGTaGCAGAGACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASHHLLQ*QRPCRG
Trigger: CCCTCTACAAGGTCTCTGTCACTGCAAGAGATGATG...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATGGAGCTCTGAGTGGATaGGTTCTCCGACTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHGALSG*VLRLGL
Trigger: GAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCC...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGATCTCTGGGGAGCTCTaGGTGGATGAGTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARISGEL*VDEFSD
Trigger: GTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGAT...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCATCTCTGGGGAGCTCTaGGTGGATGAGTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLISGEL*VDEFSD
Trigger: GTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGAT...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCGTTGTTCATCCATCCTaGTTCCCTGCATCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: GRPVAELEGPGGILGTAGVVHPS*FPASSQ
Trigger: TTGAGAAGATGCAGGGAAGCAGGATGGATGAACAAC...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGCGCCCCAAGACCTCGTaGACGCTCGGGTATGGAATG +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGRPKTS*TLGYGM
Trigger: CATTCCATACCCGAGCGTGCACGAGGTCTTGGGGCG...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCTTATTGCTGATGACATaGTCGTCAAAGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLALLLMT*SSKVTM
Trigger: CATCGTCACCTTTGACGAGCATGTCATCAGCAATAA...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCCTTGTTGCGGAAGTTaGAGTACACAGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSPCCGS*STQIRS
Trigger: GGACCGAATCTGTGTACTGCAACTTCCGCAACAAGG...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTCCTTGTTGCGGAAGTTaGAGTACACAGATTCGGTCC +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASPCCGS*STQIRS
Trigger: GGACCGAATCTGTGTACTGCAACTTCCGCAACAAGG...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCTGTTGGGCTTCTTGTTaGTCAGCCCCATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: CCSDASSWILISGHAGSPCWASC*SAPWHP
Trigger: TGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACA...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR GCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCCTCTCCCTCTTCTCCTaGACCTCCTGTATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPLSLFS*TSCMFS
Trigger: CGAGAACATACAGGAGGTGCAGGAGAAGAGGGAGAG...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTATGCTGGTGATTTCGTaGTTGGTGCCCTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASMLVIS*LVPSIQ
Trigger: CTGGATTGAGGGCACCAACCACGAAATCACCAGCAT...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGACTCGAGCTTCACCTTaGTTGTGGGCGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRTRASP*LWATAV
Trigger: CACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGT...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCAGTGAGAAGACAAGGTaGCCGAGGGCAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSSEKTR*PRAASS
Trigger: ACTGGACGCTGCCCTCGGCCACCTTGTCTTCTCACT...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTATGGGGATGACATCATaGTATGTCCGGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASMGMTS*YVRHLV
Trigger: GACCAAGTGCCGGACATACCATGATGTCATCCCCAT...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGATGGGGATGACATCATaGTATGTCCGGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVMGMTS*YVRHLV
Trigger: GACCAAGTGCCGGACATACCATGATGTCATCCCCAT...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCATTCCGCTGCAACTGCTaGGCGTCCCCTTCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPFRCNC*ASPSVY
Trigger: ATACACGGAAGGGGACGCCCAGCAGTTGCAGCGGAA...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCGGAGTGTTCTCATCCTaGAAGACCACAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPGVFSS*KTTATM
Trigger: CATCGTGGCTGTGGTCTTCCAGGATGAGAACACTCC...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGGGAGTGTTCTCATCCTaGAAGACCACAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLGVFSS*KTTATM
Trigger: CATCGTGGCTGTGGTCTTCCAGGATGAGAACACTCC...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGAAGCCCATCATGGACTaGCTGTGGATGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVKPIMD*LWMCSS
Trigger: GGAACTACACATCCACAGCCAGTCCATGATGGGCTT...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCTGTTGCTCAGCCCCATaGCATCCATGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSCCSAP*HPWTGC
Trigger: GCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACA...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSPTSSS*GSSQGQ
Trigger: TTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGG...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCCTCTGTTCTTGGTCGTaGGCATCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGLCSWS*ASLGSS
Trigger: AGAGCTCCCCAGAGATGCCCACGACCAAGAACAGAG...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTAAGGAGTCCCGCTTGTaGGGTGTTCCTGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPKESRL*GVPEDD
Trigger: GTCATCCTCAGGAACACCCCACAAGCGGGACTCCTT...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPDLWQN*RVQEAY
Trigger: GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTC...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGGCATCGGCAGACCTGTaGCAGAACTGGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGASADL*QNWRVQ
Trigger: CTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGC...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCGAAGCTGCTGGCACTaGACGAGGAGCGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLRSCWH*TRSGRS
Trigger: ACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGTTCTTAGGGTAGAGTaGAGGAGTATAGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVVLRVE*RSIGGN
Trigger: GTTCCCTCCTATACTCCTTCACTCTACCCTAAGAAC...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTTCTTAGGGTAGAGTaGAGGAGTATAGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLVLRVE*RSIGGN
Trigger: GTTCCCTCCTATACTCCTTCACTCTACCCTAAGAAC...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGACATCGTACTTGAGTaGGAAGACAAGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TRLPTQCSLPHISHPPCADIVLE*EDKVAE
Trigger: CTCGGCCACCTTGTCTTCTCACTCAAGTACGATGTC...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCGACATCGTACTTGAGTaGGAAGACAAGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGDIVLE*EDKVAE
Trigger: CTCGGCCACCTTGTCTTCTCACTCAAGTACGATGTC...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTTTTCCTCATTGGTGCTaGAGAGTTCTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCFPHWC*RVLPRR
Trigger: CCTCCGAGGAAGAACTCTTCAGCACCAATGAGGAAA...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCATCATCTCTTGCAGTaGCAGAGACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWHHLLQ*QRPCRG
Trigger: CCCTCTACAAGGTCTCTGTCACTGCAAGAGATGATG...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCATCATCTCTTGCAGTaGCAGAGACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHHHLLQ*QRPCRG
Trigger: CCCTCTACAAGGTCTCTGTCACTGCAAGAGATGATG...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGCCACCTTGTTCCCTCTaGGTCCAGAGGGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGPPCSL*VQRDAQ
Trigger: CTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGG...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCTTCACACACCAACTTTaGCATCTGGACAACATTAGG +
Preference number: 4 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGFTHQL*HLDNIR
Trigger: CCTAATGTTGTCCAGATGGCAAAGTTGGTGTGTGAA...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGTTATTGCTGATGACATaGTCGTCAAAGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGLLLMT*SSKVTM
Trigger: CATCGTCACCTTTGACGAGCATGTCATCAGCAATAA...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTAACCCCTTAAAGTCCTaGAGTTTGACCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPNPLKS*SLTFWP
Trigger: TGGCCAGAAGGTCAAACTGCAGGACTTTAAGGGGTT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACGGGCACATCATCTCTTaGAGTGACAGAGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYGHIIS*SDRDLV
Trigger: TACAAGGTCTCTGTCACTGCAAGAGATGATGTGCCC...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTTGTTGGGCTTCTTGTTaGTCAGCCCCATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: TRLPTQCSLPHISHPPCACWASC*SAPWHP
Trigger: TGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACA...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCATGTGCTGCTCAGATaGTTCCAGCTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWHVLLR*FQLDLD
Trigger: ATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTCATGTGCTGCTCAGATaGTTCCAGCTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPHVLLR*FQLDLD
Trigger: ATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCATGTGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGGTGCACGCTCGGGTATaGAATGTAGTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GMCCSDASSWILISGHAGVHARV*NVVLLC
Trigger: ACAGAGGAGGACTACATTCCATACCCGAGCGTGCAC...CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATATGCTGGTGATTTCGTaGTTGGTGCCCTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHMLVIS*LVPSIQ
Trigger: CTGGATTGAGGGCACCAACCACGAAATCACCAGCAT...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCACTCGAGCTTCACCTTaGTTGTGGGCGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLTRASP*LWATAV
Trigger: CACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGT...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATACTCGAGCTTCACCTTaGTTGTGGGCGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHTRASP*LWATAV
Trigger: CACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGT...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGGGTAGATGCGGGCTGTaGGGTTGCACTCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGGRCGL*GCTRAS
Trigger: TGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACC...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGAGTGAGAAGACAAGGTaGCCGAGGGCAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGSEKTR*PRAASS
Trigger: ACTGGACGCTGCCCTCGGCCACCTTGTCTTCTCACT...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGTGCAGTTTGACCTTCTaGCCAAGAAATTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLCSLTF*PRNSRN
Trigger: GTTCCTTGAATTTCTTGGCCAGAAGGTCAAACTGCA...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGTTCCGCTGCAACTGCTaGGCGTCCCCTTCCGTGTAT +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGFRCNC*ASPSVY
Trigger: ATACACGGAAGGGGACGCCCAGCAGTTGCAGCGGAA...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGGGAGTGTTCTCATCCTaGAAGACCACAGCCACGATG +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRGVFSS*KTTATM
Trigger: CATCGTGGCTGTGGTCTTCCAGGATGAGAACACTCC...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHRHAGS*TRSCRA
Trigger: TGCCCGACATGATCGCGTCCAACTTCCTGCATGCCT...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGGTCAGCAAAAATTCCTaGAACTCAGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWVSKNS*NSGPFL
Trigger: CAGGAAGGGGCCTGAGTTCCAGGAATTTTTGCTGAC...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCAAGCCCATCATGGACTaGCTGTGGATGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCKPIMD*LWMCSS
Trigger: GGAACTACACATCCACAGCCAGTCCATGATGGGCTT...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATTCAGATGCTTCCAGCTaGATCTTGATCTCGGGACAC +
Preference number: 4 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHSDASS*ILISGH
Trigger: GTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGA...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCCCCTTGTGCTTCTGTaGCCTCATCTGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLPLVLL*PHLLSF
Trigger: GAAACTGAGCAGATGAGGCCACAGAAGCACAAGGGG...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGTGTACGGCTGCTCAGTaGCAATGTCAGAATTCGAAC +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVCTAAQ*QCQNSN
Trigger: GTTCGAATTCTGACATTGCCACTGAGCAGCCGTACA...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR TCA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTCCAGTGAGTAGTAATTaGAATGCTCCTTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLPVSSN*NAPCRE
Trigger: TTCTCGGCAAGGAGCATTTCAATTACTACTCACTGG...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCCAGTGAGTAGTAATTaGAATGCTCCTTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSPVSSN*NAPCRE
Trigger: TTCTCGGCAAGGAGCATTTCAATTACTACTCACTGG...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCCAGTGAGTAGTAATTaGAATGCTCCTTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAPVSSN*NAPCRE
Trigger: TTCTCGGCAAGGAGCATTTCAATTACTACTCACTGG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTCCAGTGAGTAGTAATTaGAATGCTCCTTGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASPVSSN*NAPCRE
Trigger: TTCTCGGCAAGGAGCATTTCAATTACTACTCACTGG...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCGACATCGTACTTGAGTaGGAAGACAAGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSDIVLE*EDKVAE
Trigger: CTCGGCCACCTTGTCTTCTCACTCAAGTACGATGTC...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACGTTGTTCATCCATCCTaGTTCCCTGCATCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYVVHPS*FPASSQ
Trigger: TTGAGAAGATGCAGGGAAGCAGGATGGATGAACAAC...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGTTGTTCATCCATCCTaGTTCCCTGCATCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVVVHPS*FPASSQ
Trigger: TTGAGAAGATGCAGGGAAGCAGGATGGATGAACAAC...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGTTATTGCTGATGACATaGTCGTCAAAGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQLLLMT*SSKVTM
Trigger: CATCGTCACCTTTGACGAGCATGTCATCAGCAATAA...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCGGGCACATCATCTCTTaGAGTGACAGAGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPGHIIS*SDRDLV
Trigger: TACAAGGTCTCTGTCACTGCAAGAGATGATGTGCCC...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGGCACATCATCTCTTaGAGTGACAGAGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCGHIIS*SDRDLV
Trigger: TACAAGGTCTCTGTCACTGCAAGAGATGATGTGCCC...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTGTTGGGCTTCTTGTTaGTCAGCCCCATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLCWASC*SAPWHP
Trigger: TGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACA...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGCTGAGTCCAGAGGGATaGTCAGGGGTGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWLSPEG*SGVMEA
Trigger: GGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAG...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCGTGCACGCTCGGGTATaGAATGTAGTCCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSVHARV*NVVLLC
Trigger: ACAGAGGAGGACTACATTCCATACCCGAGCGTGCAC...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCATGGGGATGACATCATaGTATGTCCGGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPMGMTS*YVRHLV
Trigger: GACCAAGTGCCGGACATACCATGATGTCATCCCCAT...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGCAGTTTGACCTTCTaGCCAAGAAATTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: AASLIPGLDGSALQRQPRCSLTF*PRNSRN
Trigger: GTTCCTTGAATTTCTTGGCCAGAAGGTCAAACTGCA...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTGTCAGCAAAAATTCCTaGAACTCAGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPVSKNS*NSGPFL
Trigger: CAGGAAGGGGCCTGAGTTCCAGGAATTTTTGCTGAC...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGAAGCCCATCATGGACTaGCTGTGGATGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRKPIMD*LWMCSS
Trigger: GGAACTACACATCCACAGCCAGTCCATGATGGGCTT...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTACCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVPGRGC*ARSSRC
Trigger: ACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGG...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGTTCTTAGGGTAGAGTaGAGGAGTATAGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLVLRVE*RSIGGN
Trigger: GTTCCCTCCTATACTCCTTCACTCTACCCTAAGAAC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGAGGGCAGCGTCCAGTaGGTAGTAATTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPEGSVQ*VVIEML
Trigger: GAGCATTTCAATTACTACTCACTGGACGCTGCCCTC...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCGAGGGCAGCGTCCAGTaGGTAGTAATTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLEGSVQ*VVIEML
Trigger: GAGCATTTCAATTACTACTCACTGGACGCTGCCCTC...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCATCATCTCTTGCAGTaGCAGAGACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSHHLLQ*QRPCRG
Trigger: CCCTCTACAAGGTCTCTGTCACTGCAAGAGATGATG...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGGCATATTCAGCATTaGTCAGCTTTGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: GHRQTCGRTGGSRRHTGHRHIQH*SALSAK
Trigger: TTTTGCTGACAAAGCTGATCAATGCTGAATATGCCT...GTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGCCCAGGAATAAGCAATaGTATTCCAGCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGPRNKQ*YSSRLG
Trigger: GCCAAGGCGGCTGGAATATCATTGCTTATTCCTGGG...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTTCACACACCAACTTTaGCATCTGGACAACATTAGG +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAFTHQL*HLDNIR
Trigger: CCTAATGTTGTCCAGATGGCAAAGTTGGTGTGTGAA...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGGGCACATCATCTCTTaGAGTGACAGAGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLGHIIS*SDRDLV
Trigger: TACAAGGTCTCTGTCACTGCAAGAGATGATGTGCCC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGGGCACATCATCTCTTaGAGTGACAGAGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRGHIIS*SDRDLV
Trigger: TACAAGGTCTCTGTCACTGCAAGAGATGATGTGCCC...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGCTCTCCCTCTTCTCCTaGACCTCCTGTATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGLSLFS*TSCMFS
Trigger: CGAGAACATACAGGAGGTGCAGGAGAAGAGGGAGAG...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGCATGTGCTGCTCAGATaGTTCCAGCTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRHVLLR*FQLDLD
Trigger: ATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCTTCTGTGGCCTCATCTaGTCAGTTTCACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: APNPVLTPPHITSSLCCLFCGLI*SVSPSE
Trigger: CTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAA...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGAGTGAGAAGACAAGGTaGCCGAGGGCAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWSEKTR*PRAASS
Trigger: ACTGGACGCTGCCCTCGGCCACCTTGTCTTCTCACT...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCATGGGGATGACATCATaGTATGTCCGGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLMGMTS*YVRHLV
Trigger: GACCAAGTGCCGGACATACCATGATGTCATCCCCAT...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTGCAGTTTGACCTTCTaGCCAAGAAATTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVACSLTF*PRNSRN
Trigger: GTTCCTTGAATTTCTTGGCCAGAAGGTCAAACTGCA...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATAAGCCCATCATGGACTaGCTGTGGATGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHKPIMD*LWMCSS
Trigger: GGAACTACACATCCACAGCCAGTCCATGATGGGCTT...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTACAACTTGCCGGCGTCTaGGGAGCTGCCCCCACTAGT +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVQLAGV*GAAPTS
Trigger: ACTAGTGGGGGCAGCTCCCCAGACGCCGGCAAGTTG...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR TCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGGAGGGCAGCGTCCAGTaGGTAGTAATTGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGEGSVQ*VVIEML
Trigger: GAGCATTTCAATTACTACTCACTGGACGCTGCCCTC...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACAGGCATATTCAGCATTaGTCAGCTTTGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VDRASADLWQNWRVQEAYRHIQH*SALSAK
Trigger: TTTTGCTGACAAAGCTGATCAATGCTGAATATGCCT...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCAGGCATATTCAGCATTaGTCAGCTTTGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RSRLPGLDTAPSPCASVARHIQH*SALSAK
Trigger: TTTTGCTGACAAAGCTGATCAATGCTGAATATGCCT...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp ACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGTTGTTCATCCATCCTaGTTCCCTGCATCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TRLPTQCSLPHISHPPCAVVHPS*FPASSQ
Trigger: TTGAGAAGATGCAGGGAAGCAGGATGGATGAACAAC...AGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGGTTGTTCATCCATCCTaGTTCCCTGCATCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARVVHPS*FPASSQ
Trigger: TTGAGAAGATGCAGGGAAGCAGGATGGATGAACAAC...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGTTCACACACCAACTTTaGCATCTGGACAACATTAGG +
Preference number: 4 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLFTHQL*HLDNIR
Trigger: CCTAATGTTGTCCAGATGGCAAAGTTGGTGTGTGAA...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGTTATTGCTGATGACATaGTCGTCAAAGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWLLLMT*SSKVTM
Trigger: CATCGTCACCTTTGACGAGCATGTCATCAGCAATAA...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCAACCCCTTAAAGTCCTaGAGTTTGACCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLNPLKS*SLTFWP
Trigger: TGGCCAGAAGGTCAAACTGCAGGACTTTAAGGGGTT...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAAACCCCTTAAAGTCCTaGAGTTTGACCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPNPLKS*SLTFWP
Trigger: TGGCCAGAAGGTCAAACTGCAGGACTTTAAGGGGTT...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCAACCCCTTAAAGTCCTaGAGTTTGACCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSNPLKS*SLTFWP
Trigger: TGGCCAGAAGGTCAAACTGCAGGACTTTAAGGGGTT...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCATGTGCTGCTCAGATaGTTCCAGCTGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: LETRTRLPTQCSLPHISHHVLLR*FQLDLD
Trigger: ATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGATGCTGGTGATTTCGTaGTTGGTGCCCTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGMLVIS*LVPSIQ
Trigger: CTGGATTGAGGGCACCAACCACGAAATCACCAGCAT...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp CGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTGCAGTTTGACCTTCTaGCCAAGAAATTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: RLPTQCSLPHISHPPCAACSLTF*PRNSRN
Trigger: GTTCCTTGAATTTCTTGGCCAGAAGGTCAAACTGCA...GGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCGTGATAGGAGGTCCCTaGGAAGAAAATCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSVIGGP*EENPTF
Trigger: GAAGGTAGGATTTTCTTCCCAGGGACCTCCTATCAC...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVSRGCW*FRGWCP
Trigger: AGGGCACCAACCACGAAATCACCAGCATCCCCGAGA...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCAGGCATATTCAGCATTaGTCAGCTTTGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCRHIQH*SALSAK
Trigger: TTTTGCTGACAAAGCTGATCAATGCTGAATATGCCT...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTTTCACACACCAACTTTaGCATCTGGACAACATTAGG +
Preference number: 4 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPFTHQL*HLDNIR
Trigger: CCTAATGTTGTCCAGATGGCAAAGTTGGTGTGTGAA...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCTTATTGCTGATGACATaGTCGTCAAAGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLLLLMT*SSKVTM
Trigger: CATCGTCACCTTTGACGAGCATGTCATCAGCAATAA...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGAACCCCTTAAAGTCCTaGAGTTTGACCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGNPLKS*SLTFWP
Trigger: TGGCCAGAAGGTCAAACTGCAGGACTTTAAGGGGTT...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGGGGCACATCATCTCTTaGAGTGACAGAGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGGHIIS*SDRDLV
Trigger: TACAAGGTCTCTGTCACTGCAAGAGATGATGTGCCC...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTAGGCACCTTCCCCTTGTaGTTCTGTGGCCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVGTFPL*FCGLIC
Trigger: GCAGATGAGGCCACAGAAGCACAAGGGGAAGGTGCC...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTAGACCTGTGGCAGAACTaGAGGGTCCAGGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVDLWQN*RVQEAY
Trigger: GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTC...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp GTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGAGGCATATTCAGCATTaGTCAGCTTTGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VTPKKCDQTHKGSQQLCRRHIQH*SALSAK
Trigger: TTTTGCTGACAAAGCTGATCAATGCTGAATATGCCT...CCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGAGGCATATTCAGCATTaGTCAGCTTTGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LCFCGLICSVSPSEGVARRHIQH*SALSAK
Trigger: TTTTGCTGACAAAGCTGATCAATGCTGAATATGCCT...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR GCA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGGTTGTTCATCCATCCTaGTTCCCTGCATCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGVVHPS*FPASSQ
Trigger: TTGAGAAGATGCAGGGAAGCAGGATGGATGAACAAC...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTAAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVRHAGS*TRSCRA
Trigger: TGCCCGACATGATCGCGTCCAACTTCCTGCATGCCT...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR GCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTACTCTCCCTCTTCTCCTaGACCTCCTGTATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVLSLFS*TSCMFS
Trigger: CGAGAACATACAGGAGGTGCAGGAGAAGAGGGAGAG...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR TCA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTTCCTCATTGGTGCTaGAGAGTTCTTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVFPHWC*RVLPRR
Trigger: CCTCCGAGGAAGAACTCTTCAGCACCAATGAGGAAA...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CCA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGTGCAGTTTGACCTTCTaGCCAAGAAATTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWCSLTF*PRNSRN
Trigger: GTTCCTTGAATTTCTTGGCCAGAAGGTCAAACTGCA...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS GCA 90 bp ACCCCAAGGGCCTGGGCCGGGGGCGTCCTGGGCTCGGCACTCTGGTaGCCGCGGCCGCCGCTGCAGCTCTGCTCAGATGCGGCCGGCGCT +
Preference number: 5 (lower is better)
Translates to: TPRAWAGGVLGSALW*PRPPLQLCSDAAGA
Trigger: AGCGCCGGCCGCATCTGAGCAGAGCTGCAGCGGCGGCCGCGGGCACCAGAGTGCCGAGCCCAGGACGCCCCCGGCCCAGGCCCTTGGGGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374765.9
CDS-3UTR CAA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAARSGL*GAKLPL
Trigger: CAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGC...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAGCAGGGTCCCCCAACTaGCCGGCGTCTGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: RAPSSCAGLPPPWRSGEAAGSPN*PASGWG
Trigger: ACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGC...TGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR CAA 90 bp GCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACGGCCAGCTGAGACTCTaGGCCTGGAGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: AAVPGCPLHGGRGRQGLDGQLRL*AWRAQH
Trigger: ATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCC...GTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSARSGL*GAKLPL
Trigger: CAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGC...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGCAGGGTCCCCCAACTaGCCGGCGTCTGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSAGSPN*PASGEL
Trigger: CAGCTCCCCAGACGCCGGCAAGTTGGGGGACCCTGC...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR CAA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCGAGCTTCACCTTGGTaGTGGGCGACTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRRASPW*WATAVA
Trigger: AGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCG...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRDIPAA*ARSGLL
Trigger: CAACAACCCCGACCTGGCCAAGGCGGCTGGAATATC...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLDIPAA*ARSGLL
Trigger: CAACAACCCCGACCTGGCCAAGGCGGCTGGAATATC...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: PAAVPGCPLHGGRGRQGLASSWI*ISGHAG
Trigger: CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGC...CAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS TCA 90 bp AGGGGCACTGGCTCTGGCACAGGTACCAGGCCCCAAAGCAGGTGCTaGGTGCCATCGGAGCTGCCGCCACTCCATCCCGCACGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: RGTGSGTGTRPQSRC*VPSELPPLHPARPG
Trigger: CCCAGGGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGGTACCTGTGCCAGAGCCAGTGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS GCA 90 bp GCACTGGCTCTGGCACAGGTACCAGGCCCCAAAGCAGGTGCTGAGTaGCATCGGAGCTGCCGCCACTCCATCCCGCACGCCCTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: ALALAQVPGPKAGAE*HRSCRHSIPHALGP
Trigger: AGGCCCCAGGGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGGTACCTGTGCCAGAGCCAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS CCA 90 bp CCACACCCTCCGTCTCCTCCACCACGCTGGCGAAGCTGCTGGCACTaGACGAGGAGCGGGAGCTTGAGCGCCTCTGCTCTCTGCGCTGCG +
Preference number: 5 (lower is better)
Translates to: PHPPSPPPRWRSCWH*TRSGSLSASALCAA
Trigger: CGCAGCGCAGAGAGCAGAGGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGACGGAGGGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS CCA 90 bp TGGCGCTGCTGCGGCGGGAGCCGAACGGGCCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAATCAGTGACTGTGGGGAGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: WRCCGGSRTGPTSSS*GSSQGQSVTVGRGP
Trigger: GGGGCCTCTCCCCACAGTCACTGATTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS-3UTR CAA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCGCAGGGTCCCCCAACTaGCCGGCGTCTGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGAGSPN*PASGWG
Trigger: ACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGC...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
CDS-3UTR CAA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGCAGGGTCCCCCAACTaGCCGGCGTCTGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPAGSPN*PASGWG
Trigger: ACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
CDS-3UTR CAA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCGGCCAGCTGAGACTCTaGGCCTGGAGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVGQLRL*AWRAQH
Trigger: ATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCC...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCTTCCAAAATGGGTATaGGGGCCAGGAGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGLPKWV*GPGGWP
Trigger: AGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAAG...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS GCA 90 bp CCTCTCCGTCCACACCCTCCGTCTCCTCCACCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGCGGGAGCTTGAGCGCCTCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PLRPHPPSPPPRWRS*WHWTRSGSLSASAL
Trigger: GAGAGCAGAGGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGACGGAGGGTGTGGACGGAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS CCA 90 bp CTCCGTCCACACCCTCCGTCTCCTCCACCACGCTGGCGAAGCTGCTaGCACTGGACGAGGAGCGGGAGCTTGAGCGCCTCTGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LRPHPPSPPPRWRSC*HWTRSGSLSASALC
Trigger: GCAGAGAGCAGAGGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGACGGAGGGTGTGGACGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR CAA 90 bp CAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGGTCCGCTCCTCCAGTTaGGCAAACTTCTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: QGLPAAVPGCPLHGGRGRVRSSS*ANFSAL
Trigger: CAAGGCAGAGAAGTTTGCCAAACTGGAGGAGCGGAC...CCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLLARSG*LGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAA...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCATTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPLARSG*LGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAA...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGLARSG*LGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAA...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGCAGGGTCCCCCAACTaGCCGGCGTCTGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVAGSPN*PASGWG
Trigger: ACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGC...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
CDS TCA 90 bp CACCACGCTGGCGAAGCTGCTGGCACTGGACGAGGAGCGGGAGCTTaGGCGCCTCTGCTCTCTGCGCTGCGGTCTCCGCTCTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: HHAGEAAGTGRGAGA*APLLSALRSPLCSW
Trigger: CCAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS CCA 90 bp GCCGCCTTGGCCAGGTCGGGGTTGTTGGGCGCGAAGCTCCCGCTGTaGCTGGTGGACACGGTGTTGGGCTTCTTGTTGCTCAGCCCCATG +
Preference number: 5 (lower is better)
Translates to: AALARSGLLGAKLPL*LVDTVLGFLLLSPM
Trigger: CATGGGGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp TGGCGCTGCTGCGGCGGGAGCCGAACGGGCCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAATCAGTGACAGGCCCCAAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: WRCCGGSRTGPTSSS*GSSQGQSVTGPKAG
Trigger: ACCTGCTTTGGGGCCTGTCACTGATTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS-3UTR CAA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCATGCGGGCTGTGGGGTaGCACTCGAGCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVMRAVG*HSSFTL
Trigger: CAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCAT...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCGCGGGACTTTCCTCATaGGTGCTGAAGAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: CRAAPSMAVGGGKAWTLGAGLSS*VLKSSS
Trigger: GGAAGAACTCTTCAGCACCAATGAGGAAAGTCCCGC...GCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASARSGL*GAKLPL
Trigger: CAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGC...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCTCCGCTCTGTTCTaGGTCGTGGGCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAVSALF*VVGISG
Trigger: CCCAGAGATGCCCACGACCAAGAACAGAGCGGAGAC...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS TCA 90 bp CGCTGGCGAAGCTGCTGGCACTGGACGAGGAGCGGGAGAAGTCCTTaGGCGCCTCTGCTCTCTGCGCTGCGGTCTCCGCTCTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RWRSCWHWTRSGRSP*APLLSALRSPLCSW
Trigger: CCAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 90 bp TCTTCCCAGGGACAATCAGTGACAGGCCCCAAAGCAGGTGCTGAGTaGCATCGGAGCTGCCGCCACTCCATCCCGCACGCCCTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: SSQGQSVTGPKAGAE*HRSCRHSIPHALGP
Trigger: AGGCCCCAGGGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGTCACTGATTGTCCCTGGGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS GCA 90 bp CCCTCTTCTCCTGCACCTCCTGTATGTTCTCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACGGGCCCGACTTCTTCCTCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PSSPAPPVCSRCQWR*CGGSRTGPTSSSWG
Trigger: GCCCCACGAGGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACATACAGGAGGTGCAGGAGAAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 90 bp GCGAAGCTGCTGGCACTGGACGAGGAGCGGGAGCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTCCGCTCTGTTCTTGGTCGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: AKLLALDEERELERL*SLRCGLRSVLGRGH
Trigger: ATGCCCACGACCAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS CCA 90 bp TGGCGCTGCTGCGGCGGGAGCCGAACGGGCCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAATCAGTGATATTCCAGCCGCCTTGG +
Preference number: 5 (lower is better)
Translates to: WRCCGGSRTGPTSSS*GSSQGQSVIFQPPW
Trigger: CCAAGGCGGCTGGAATATCACTGATTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
CDS-3UTR CAA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTCGAGAAGTGAAGGACTaGTCCACCCCAAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPREVKD*STPRAW
Trigger: CCAGGCCCTTGGGGTGGACAAGTCCTTCACTTCTCG...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR CAA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGCGGGAAGGAGCAGCGTaGTTCATCCATCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAREGAA*FIHPAS
Trigger: GGAAGCAGGATGGATGAACAACGCTGCTCCTTCCCG...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGATGCGGGCTGTGGGGTaGCACTCGAGCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWMRAVG*HSSFTL
Trigger: CAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCAT...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCCCGATGACATCGTACTaGAGTGAGAAGACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAPMTSY*SEKTRW
Trigger: CCACCTTGTCTTCTCACTCAAGTACGATGTCATCGG...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VLLWPHLLSFTFRGGGPAARSGL*GAKLPL
Trigger: CAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGC...AGCCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CAA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHARSGL*GAKLPL
Trigger: CAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGC...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLADIPAA*ARSGLL
Trigger: CAACAACCCCGACCTGGCCAAGGCGGCTGGAATATC...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGAACAGCAGAACCCAAATaGGAAACCAGGACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: APSMAVGGGKAWTLGQLRTAEPK*ETRTRL
Trigger: GAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTGT...TCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCGGCCAGCTGAGACTCTaGGCCTGGAGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLGQLRL*AWRAQH
Trigger: ATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCC...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS TCA 90 bp AGCCCAGCTGGGGCATGTGCTGCTCAGATGCTTCCAGCTGGATCTTaGTCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SPAGACAAQMLPAGS*SRDTQGPPTCRRLG
Trigger: CCCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATGCCCCAGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS GCA 90 bp GCTGCTGGCACTGGACGAGGAGCGGGAGAAGTCCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTCCGCTCTGTTCTTGGTCGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: AAGTGRGAGEVLERL*SLRCGLRSVLGRGH
Trigger: ATGCCCACGACCAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp TGGCCAGGTCGGGGTTGTTGGGCGCGAAGCTCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCTTGTTGCTCAGCCCCATGGCATCCA +
Preference number: 5 (lower is better)
Translates to: WPGRGCWARSSRCGW*TRCWASCCSAPWHP
Trigger: TGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp CCTTGGCCAGGTCGGGGTTGTTGGGCGCGAAGCTCCCGCTGTGGCTaGTGGACACGGTGTTGGGCTTCTTGTTGCTCAGCCCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: PWPGRGCWARSSRCG*WTRCWASCCSAPWH
Trigger: ATGCCATGGGGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp TTCGAACTTGGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTaGCCTCGGTTGGCAGAGGTATTAACCCAAGGGCCTGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: FELGSASSEWGSEGG*PRLAEVLTQGPGPG
Trigger: CCCCGGCCCAGGCCCTTGGGTTAATACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317967.11
ENST00000542643.6
CDS CCA 90 bp TGGCGCTGCTGCGGCGGGAGCCGAACGGGCCCGACTTCTTCCTCGTaGGGCTCTTCCCAGGGACAATCAGTGACTCTTCCACGGTTCCTA +
Preference number: 5 (lower is better)
Translates to: WRCCGGSRTGPTSSS*GSSQGQSVTLPRFL
Trigger: TAGGAACCGTGGAAGAGTCACTGATTGTCCCTGGGAAGAGCCCCACGAGGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCCTCACTCGAGCTTCACCTaGGTTGTGGGCGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: GRTGGSRRHTGHSRLPAPHSSFT*VVGDCS
Trigger: ACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTG...AGGGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCTGCCATTCTCCATCTaGTCCTCGTCGCCGCCCAAG +
Preference number: 5 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGLPFSI*SSSPPK
Trigger: CTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAG...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGATGAAGGAGTCCCGCTaGTGGGGTGTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: DQTHKGSQQLCRAAPSMAMKESR*WGVPED
Trigger: ATCCTCAGGAACACCCCACAAGCGGGACTCCTTCAT...CGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS GCA 90 bp TCTTCTCCTGCACCTCCTGTATGTTCTCGATGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGCCCGACTTCTTCCTCGTGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: SSPAPPVCSRCQWRC*GGSRTGPTSSSWGS
Trigger: AGAGCCCCACGAGGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACATACAGGAGGTGCAGGAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp GGTTGTTGGGCGCGAAGCTCCCGCTGTGGCTGGTGGACACGGTGTTaGGCTTCTTGTTGCTCAGCCCCATGGCATCCATGGACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GCWARSSRCGWWTRC*ASCCSAPWHPWTGC
Trigger: GCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS-3UTR CAA 90 bp AGCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGCGAGCTTCACCTTGGTaGTGGGCGACTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SSFPDPRSGRLCPAETAQRASPW*WATAVA
Trigger: AGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCG...CTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCACTCGAGCTTCACCTaGGTTGTGGGCGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGHSSFT*VVGDCS
Trigger: ACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTG...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGATGCGGGCTGTGGGGTaGCACTCGAGCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVMRAVG*HSSFTL
Trigger: CAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCAT...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGACAGCCGCAGGTGCTCTaGGTCCCCGATGACATCGTA +
Preference number: 5 (lower is better)
Translates to: AASLIPGLDGSALQRQPRQPQVL*VPDDIV
Trigger: TACGATGTCATCGGGGACCAAGAGCACCTGCGGCTG...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCGTCCGCTCCTCCAGTTaGGCAAACTTCTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: HGGRGRQGLDSRPAETLGVRSSS*ANFSAL
Trigger: CAAGGCAGAGAAGTTTGCCAAACTGGAGGAGCGGAC...GCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp ATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCCCTCCGGATGACCCGCTaGAAAGACTCAAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: MAVGGGKAWTLGQLRLLALRMTR*KDSKKP
Trigger: CGGCTTCTTTGAGTCTTTCAAGCGGGTCATCCGGAG...GGCCAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LCCLQGLSSPHGAVSNSLARSGL*GAKLPL
Trigger: CAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGC...GAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: APNPVLTPPHITSSLCCLLARSG*LGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAA...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRLARSG*LGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAA...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCGATGAGTTCTCCGACTaGGGCTCCTGTGAGACGTGC +
Preference number: 5 (lower is better)
Translates to: LIPGLDGSALQRQPRWVGDEFSD*GSCETC
Trigger: GCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATC...GCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TGGATCTTGATCTCGGGACACGCAGGGTCCCCCAACTTGCCGGCGTCTGGGTGGGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: WILISGHAGSPNLPASGWASSWI*ISGHAG
Trigger: CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGC...CCACCCAGACGCCGGCAAGTTGGGGGACCCTGCGTGTCCCGAGATCAAGATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CAA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGAGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: AASLIPGLDGSALQRQPRASSWI*ISGHAG
Trigger: CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGC...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACGGCCAGCTGAGACTCTaGGCCTGGAGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHGQLRL*AWRAQH
Trigger: ATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCC...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCACCTTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGCCAGCTGAGACTCTaGGCCTGGAGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: SHLVPSESRGMLRGDGGPGQLRL*AWRAQH
Trigger: ATGCTGGGCCCTCCAGGCCAAGAGTCTCAGCTGGCC...TGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAAGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCGAGCGGGAGAAGTCCTaGAGCGCCTCTGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSEREKS*SASALC
Trigger: GCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTC...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGAGCGGGAGAAGTCCTaGAGCGCCTCTGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVEREKS*SASALC
Trigger: GCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTC...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS TCA 90 bp GCGGTCTCCGCTCTGTTCTTGGTCGTGGGCATCTCTGGGGAGCTCTaGGTGGATGAGTTCTCCGACTTGGGCTCCTGTGAGACGTGCCCG +
Preference number: 5 (lower is better)
Translates to: AVSALFLVVGISGEL*VDEFSDLGSCETCP
Trigger: CGGGCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGATGCCCACGACCAAGAACAGAGCGGAGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS TCA 90 bp AAACACACACACACAGGCGCCACAGCACGACAGCCATGCGCGCACTaGGGTCAAACGCTCAGCCCCCACAGCAGTCATAGCCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: KHTHTGATARQPCAH*GQTLSPHSSHSPGP
Trigger: TGGGCCTGGGCTATGACTGCTGTGGGGGCTGAGCGTTTGACCTCAGTGCGCGCATGGCTGTCGTGCTGTGGCGCCTGTGTGTGTGTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS GCA 90 bp AGGACTTGTCCACCCTATACATGTGAGCAGTTGCGCACACACGCATaGACACACACGCGCGCACACACAGGCGGAGTAGCCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RTCPPYTCEQLRTHA*THTRAHTGGVAPQP
Trigger: GGGCTGCGGGGCTACTCCGCCTGTGTGTGCGCGCGTGTGTGTGCATGCGTGTGTGCGCAACTGCTCACATGTATAGGGTGGACAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 90 bp GGCCCCCGCCCTCAGCCTGCACCACGACGTAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCACGAAAGGAGTGTTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: GPRPQPAPRRRHAGS*TRSCRARKECSHPG
Trigger: TCCAGGATGAGAACACTCCTTTCGTGCCCGACATGATCGCGTCCAACTTCCTGCATGCCTACGTCGTGGTGCAGGCTGAGGGCGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS-3UTR CAA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTCGAGCTTCACCTTGGTaGTGGGCGACTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCARASPW*WATAVA
Trigger: AGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCG...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCGAGCTTCACCTTGGTaGTGGGCGACTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWRASPW*WATAVA
Trigger: AGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGATGCGGGCTGTGGGGTaGCACTCGAGCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGMRAVG*HSSFTL
Trigger: CAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCAT...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCAGCCGCAGGTGCTCTaGGTCCCCGATGACATCGTA +
Preference number: 5 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAQPQVL*VPDDIV
Trigger: TACGATGTCATCGGGGACCAAGAGCACCTGCGGCTG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCAGCCGCAGGTGCTCTaGGTCCCCGATGACATCGTA +
Preference number: 5 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWQPQVL*VPDDIV
Trigger: TACGATGTCATCGGGGACCAAGAGCACCTGCGGCTG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTCAGCCGCAGGTGCTCTaGGTCCCCGATGACATCGTA +
Preference number: 5 (lower is better)
Translates to: GQRSRLPGLDTAPSPCASQPQVL*VPDDIV
Trigger: TACGATGTCATCGGGGACCAAGAGCACCTGCGGCTG...AGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACTGGTATGTCCGGCACTaGGTCCTGAGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHWYVRH*VLSSSR
Trigger: GCGGCTGCTGCTCAGGACCAAGTGCCGGACATACCA...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGTGGTATGTCCGGCACTaGGTCCTGAGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWWYVRH*VLSSSR
Trigger: GCGGCTGCTGCTCAGGACCAAGTGCCGGACATACCA...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTTGGTATGTCCGGCACTaGGTCCTGAGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: VLLWPHLLSFTFRGGGPAWYVRH*VLSSSR
Trigger: GCGGCTGCTGCTCAGGACCAAGTGCCGGACATACCA...AGCCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CAA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTTGGTATGTCCGGCACTaGGTCCTGAGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCWYVRH*VLSSSR
Trigger: GCGGCTGCTGCTCAGGACCAAGTGCCGGACATACCA...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCGCGGGACTTTCCTCATaGGTGCTGAAGAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: VAELEGPGGILGTAGSLPAGLSS*VLKSSS
Trigger: GGAAGAACTCTTCAGCACCAATGAGGAAAGTCCCGC...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGGGGGAGGCAAGGCCCAGGCATATTCAGCATaGATCAGCTTTGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SQQLCRAAPSMAVGGGKAQAYSA*ISFVSK
Trigger: TTTGCTGACAAAGCTGATCAATGCTGAATATGCCTG...GGCCTTGCCTCCCCCGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACCTGCCATTCTCCATCTaGTCCTCGTCGCCGCCCAAG +
Preference number: 5 (lower is better)
Translates to: VDRASADLWQNWRVQEAYLPFSI*SSSPPK
Trigger: CTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAG...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGCTCCGGATGACCCGCTaGAAAGACTCAAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLLRMTR*KDSKKP
Trigger: CGGCTTCTTTGAGTCTTTCAAGCGGGTCATCCGGAG...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLDIPAA*ARSGLL
Trigger: CAACAACCCCGACCTGGCCAAGGCGGCTGGAATATC...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPDIPAA*ARSGLL
Trigger: CAACAACCCCGACCTGGCCAAGGCGGCTGGAATATC...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGGTCTCCGCTCTGTTCTaGGTCGTGGGCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LQGRGLVCLGLTRHLPLVVSALF*VVGISG
Trigger: CCCAGAGATGCCCACGACCAAGAACAGAGCGGAGAC...CACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCATATCACATCCTCCTaGTGCTGCCTCCAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: PDPRSGRLCPAETAQMGGHITSS*CCLQGL
Trigger: TAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATG...CCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAACAGCAGAACCCAAATaGGAAACCAGGACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPTAEPK*ETRTRL
Trigger: GAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTGT...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCGAGCGGGAGAAGTCCTaGAGCGCCTCTGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAAEREKS*SASALC
Trigger: GCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTC...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATGAGCGGGAGAAGTCCTaGAGCGCCTCTGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHEREKS*SASALC
Trigger: GCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTC...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS GCA 90 bp CGGGCTGTGGGGTTGCACTCGAGCTTCACCTTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGGATGCTGGTGATTTCGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RAVGLHSSFTLVVGD*SGSVSGMLVISWLV
Trigger: CACCAACCACGAAATCACCAGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 90 bp GCTCCTTGCCGAGAAAGTGCTTCCGGTAGATGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGGTTGTGGGCGACTGCAGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: APCRESASGRCGLWG*TRASPWLWATAVAL
Trigger: CAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACCGGAAGCACTTTCTCGGCAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290101.8
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp GGCAGAGGTATTAACCTCCTGGCAGCAAAGGGGAGCAGGTCCACATaGACCACTCCACCACGGCGTTCACCCTTCCTCCTCTCCACCGCT +
Preference number: 5 (lower is better)
Translates to: GRGINLLAAKGSRST*TTPPRRSPFLLSTA
Trigger: AGCGGTGGAGAGGAGGAAGGGTGAACGCCGTGGTGGAGTGGTCCATGTGGACCTGCTCCCCTTTGCTGCCAGGAGGTTAATACCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482984.5
CDS-3UTR CAA 90 bp AGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCCGGGAAGGAGCAGCGTaGTTCATCCATCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RSRLPGLDTAPSPCASVAREGAA*FIHPAS
Trigger: GGAAGCAGGATGGATGAACAACGCTGCTCCTTCCCG...GGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGCGGGAAGGAGCAGCGTaGTTCATCCATCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGREGAA*FIHPAS
Trigger: GGAAGCAGGATGGATGAACAACGCTGCTCCTTCCCG...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCGGGAAGGAGCAGCGTaGTTCATCCATCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGREGAA*FIHPAS
Trigger: GGAAGCAGGATGGATGAACAACGCTGCTCCTTCCCG...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCGAGCTTCACCTTGGTaGTGGGCGACTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLRASPW*WATAVA
Trigger: AGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCG...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGATGCGGGCTGTGGGGTaGCACTCGAGCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLMRAVG*HSSFTL
Trigger: CAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCAT...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGTGGTATGTCCGGCACTaGGTCCTGAGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRWYVRH*VLSSSR
Trigger: GCGGCTGCTGCTCAGGACCAAGTGCCGGACATACCA...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTTGGTATGTCCGGCACTaGGTCCTGAGCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPWYVRH*VLSSSR
Trigger: GCGGCTGCTGCTCAGGACCAAGTGCCGGACATACCA...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGGCGGGACTTTCCTCATaGGTGCTGAAGAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLAGLSS*VLKSSS
Trigger: GGAAGAACTCTTCAGCACCAATGAGGAAAGTCCCGC...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCAGCGGGACTTTCCTCATaGGTGCTGAAGAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPAGLSS*VLKSSS
Trigger: GGAAGAACTCTTCAGCACCAATGAGGAAAGTCCCGC...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCGTCCGCTCCTCCAGTTaGGCAAACTTCTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLVRSSS*ANFSAL
Trigger: CAAGGCAGAGAAGTTTGCCAAACTGGAGGAGCGGAC...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGGTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: QLLPTSTRPQGLPKWVLGLARSG*LGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAA...CCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATGTCTCCGCTCTGTTCTaGGTCGTGGGCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHVSALF*VVGISG
Trigger: CCCAGAGATGCCCACGACCAAGAACAGAGCGGAGAC...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPASSWI*ISGHAG
Trigger: CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGC...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCTTCCAAAATGGGTATaGGGGCCAGGAGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGLPKWV*GPGGWP
Trigger: AGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAAG...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS TCA 90 bp CCTTGGTTGTGGGCGACTGCAGTGGCTCTGTCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCTCAATCCAGTAGCCCCCAAACTGGG +
Preference number: 5 (lower is better)
Translates to: PWLWATAVALSRGCW*FRGWCPQSSSPQTG
Trigger: CCCAGTTTGGGGGCTACTGGATTGAGGGCACCAACCACGAAATCACCAGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 90 bp GTTGTACGGCTGCTCAGTGGCAATGTCAGAATTCGAACTTGGGTCTaGTTCCTCCGAATGGGGGTCCGAGGGAGGGTGGCCTCGGTTGGC +
Preference number: 5 (lower is better)
Translates to: VVRLLSGNVRIRTWV*FLRMGVRGRVASVG
Trigger: GCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAGCCGTACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS GCA 90 bp CCGGCGAGAAGTGAAGGACTTGTCCACCCTATACATGTGAGCAGTTaGGCACACACGCATGCACACACACGCGCGCACACACAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PARSEGLVHPIHVSS*AHTHAHTRAHTQAE
Trigger: CTCCGCCTGTGTGTGCGCGCGTGTGTGTGCATGCGTGTGTGCGCAACTGCTCACATGTATAGGGTGGACAAGTCCTTCACTTCTCGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 90 bp TGTGGGGTTGCACTCGAGCTTCACCTTGGTTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCTGGTGATTTCGTGGTTGGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: CGVALELHLGCGRLQ*LCLGDAGDFVVGAL
Trigger: GAGGGCACCAACCACGAAATCACCAGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp TTCGAACTTGGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTaGCCTCGGTTGGCAGAGGTATTAACCTCCTGGCAGCAAAGGGGA +
Preference number: 5 (lower is better)
Translates to: FELGSASSEWGSEGG*PRLAEVLTSWQQRG
Trigger: TCCCCTTTGCTGCCAGGAGGTTAATACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482984.5
CDS-3UTR CAA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCGAGCTTCACCTTGGTaGTGGGCGACTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LCFCGLICSVSPSEGVARRASPW*WATAVA
Trigger: AGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCG...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCCACTCGAGCTTCACCTaGGTTGTGGGCGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: QNPNWKPGPGSQPSAHSPHSSFT*VVGDCS
Trigger: ACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTG...GGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCATGCGGGCTGTGGGGTaGCACTCGAGCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLMRAVG*HSSFTL
Trigger: CAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCAT...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCCCGATGACATCGTACTaGAGTGAGAAGACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GRPVAELEGPGGILGTAGPMTSY*SEKTRW
Trigger: CCACCTTGTCTTCTCACTCAAGTACGATGTCATCGG...GCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGCCGCAGGTGCTCTaGGTCCCCGATGACATCGTA +
Preference number: 5 (lower is better)
Translates to: APNPVLTPPHITSSLCCLQPQVL*VPDDIV
Trigger: TACGATGTCATCGGGGACCAAGAGCACCTGCGGCTG...GAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGCGGTCGAACATGATCTCCTTGTaGCGGAAGTTGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: RHTRAPSSCAGLPPPWRSNMISL*RKLQYT
Trigger: TGTGTACTGCAACTTCCGCAACAAGGAGATCATGTT...CGACCGCCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGGGGAGGCAGGGGGCAGCCCACGGGCTGGTGTTGGTCTTCAGGGCAGAGGTCAACATGATCTCCTTGTaGCGGAAGTTGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: VGRQGAAHGLVLVFRAEVNMISL*RKLQYT
Trigger: TGTGTACTGCAACTTCCGCAACAAGGAGATCATGTT...GACCTCTGCCCTGAAGACCAACACCAGCCCGTGGGCTGCCCCCTGCCTCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTGTCCGCTCCTCCAGTTaGGCAAACTTCTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCAVRSSS*ANFSAL
Trigger: CAAGGCAGAGAAGTTTGCCAAACTGGAGGAGCGGAC...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCCTGCCATTCTCCATCTaGTCCTCGTCGCCGCCCAAG +
Preference number: 5 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLLPFSI*SSSPPK
Trigger: CTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAG...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCTGCCATTCTCCATCTaGTCCTCGTCGCCGCCCAAG +
Preference number: 5 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPLPFSI*SSSPPK
Trigger: CTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAG...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCTCCGGATGACCCGCTaGAAAGACTCAAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGLRMTR*KDSKKP
Trigger: CGGCTTCTTTGAGTCTTTCAAGCGGGTCATCCGGAG...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGCTCCGGATGACCCGCTaGAAAGACTCAAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GRGLVCLGLTRHLPLVLLLRMTR*KDSKKP
Trigger: CGGCTTCTTTGAGTCTTTCAAGCGGGTCATCCGGAG...CAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp AGCAGAACCCAAATTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SRTQIGNQDPAPNPVLTPDIPAA*ARSGLL
Trigger: CAACAACCCCGACCTGGCCAAGGCGGCTGGAATATC...GGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGCTGATGAGTTCTCCGACTaGGGCTCCTGTGAGACGTGC +
Preference number: 5 (lower is better)
Translates to: VLLWPHLLSFTFRGGGPADEFSD*GSCETC
Trigger: GCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATC...AGCCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS-3UTR CAA 90 bp GGGGCCAGGAGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACGATGAGTTCTCCGACTaGGGCTCCTGTGAGACGTGC +
Preference number: 5 (lower is better)
Translates to: GARRLAFGVTPKKCDQTHDEFSD*GSCETC
Trigger: GCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATC...GTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCTCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGGTCTCCGCTCTGTTCTaGGTCGTGGGCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LCFCGLICSVSPSEGVARVSALF*VVGISG
Trigger: CCCAGAGATGCCCACGACCAAGAACAGAGCGGAGAC...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCGTCTCCGCTCTGTTCTaGGTCGTGGGCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLVSALF*VVGISG
Trigger: CCCAGAGATGCCCACGACCAAGAACAGAGCGGAGAC...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGCCCACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTATGAAGGAGTCCCGCTaGTGGGGTGTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: QPTWGSRDLKKQGRVIGGMKESR*WGVPED
Trigger: ATCCTCAGGAACACCCCACAAGCGGGACTCCTTCAT...ACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTATGAAGGAGTCCCGCTaGTGGGGTGTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLMKESR*WGVPED
Trigger: ATCCTCAGGAACACCCCACAAGCGGGACTCCTTCAT...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGGCAGGGTCCCCCAACTaGCCGGCGTCTGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWAGSPN*PASGWG
Trigger: ACCCCACCCAGACGCCGGCAAGTTGGGGGACCCTGC...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
CDS-3UTR CAA 90 bp GGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGAAGAAGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: GSRDLKKQGRVIGGPWEEASSWI*ISGHAG
Trigger: CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGC...TTCTTCCCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCACGGCACCTTCCCCTaGTGCTTCTGTGGCCTCATC +
Preference number: 5 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPHGTFP*CFCGLI
Trigger: GATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTG...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCTTCCAAAATGGGTATaGGGGCCAGGAGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAALPKWV*GPGGWP
Trigger: AGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAAG...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCGAGCGGGAGAAGTCCTaGAGCGCCTCTGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSEREKS*SASALC
Trigger: GCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTC...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS GCA 90 bp TTGGCAGAGGTATTAACCTCCGGAGACTGTGTGTGTGTGCAGGTGTaGGTACACAAGGTTTCTTCCCCAAGCCCAGGCGCCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LAEVLTSGDCVCVQV*VHKVSSPSPGAPQL
Trigger: CAGCTGCGGGGCGCCTGGGCTTGGGGAAGAAACCTTGTGTACGCACACCTGCACACACACACAGTCTCCGGAGGTTAATACCTCTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464457.1
CDS CCA 90 bp ACGGTGTTGGGCTTCTTGTTGCTCAGCCCCATGGCATCCATGGACTaGCTGCGGCTCCGGATGACCCGCTTGAAAGACTCAAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: TVLGFLLLSPMASMD*LRLRMTRLKDSKKP
Trigger: CGGCTTCTTTGAGTCTTTCAAGCGGGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACAAGAAGCCCAACACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp TTCGAACTTGGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTaGCCTCGGTTGGCAGAGGTATTAACCTCCGGAGACTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: FELGSASSEWGSEGG*PRLAEVLTSGDCVC
Trigger: ACACACACAGTCTCCGGAGGTTAATACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464457.1
CDS-3UTR CAA 90 bp CCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGCACTCGAGCTTCACCTaGGTTGTGGGCGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: PTYHILLVLPPGAKLSTRHSSFT*VVGDCS
Trigger: ACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTG...CCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCAGCTTCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGACCGATGACATCGTACTaGAGTGAGAAGACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: AASLIPGLDGSALQRQPRPMTSY*SEKTRW
Trigger: CCACCTTGTCTTCTCACTCAAGTACGATGTCATCGG...TCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGAAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCCCTGCCCAACATGATCTCCTTGTaGCGGAAGTTGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: VAELEGPGGILGTAGSLPNMISL*RKLQYT
Trigger: TGTGTACTGCAACTTCCGCAACAAGGAGATCATGTT...GGGCAGGGAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTGGAAACCAGGACCCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCTGCCATTCTCCATCTaGTCCTCGTCGCCGCCCAAG +
Preference number: 5 (lower is better)
Translates to: LETRTRLPTQCSLPHISHLPFSI*SSSPPK
Trigger: CTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAG...ATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGGGTCCTGGTTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGATGAGTTCTCCGACTaGGGCTCCTGTGAGACGTGC +
Preference number: 5 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLDEFSD*GSCETC
Trigger: GCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTGATGAGTTCTCCGACTaGGGCTCCTGTGAGACGTGC +
Preference number: 5 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPDEFSD*GSCETC
Trigger: GCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATC...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCCCCATGAAGGAGTCCCGCTaGTGGGGTGTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: CCSDASSWILISGHAGSPMKESR*WGVPED
Trigger: ATCCTCAGGAACACCCCACAAGCGGGACTCCTTCAT...GGGGGACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS-3UTR CAA 90 bp AGGCTGGCCTTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCGCTTCCAGCTGGATCTaGATCTCGGGACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: RLAFGVTPKKCDQTHKGSASSWI*ISGHAG
Trigger: CCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGC...GGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAAGGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCATATCACATCCTCCTaGTGCTGCCTCCAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHHITSS*CCLQGL
Trigger: TAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATG...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCACAGCAGAACCCAAATaGGAAACCAGGACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: PKKCDQTHKGSQQLCRAATAEPK*ETRTRL
Trigger: GAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTGT...GGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS TCA 90 bp CACACACTCCGGCGAGAAGTGAAGGACTTGTCCACCCTATACATGTaGGCAGTTGCGCACACACGCATGCACACACACGCGCGCACACAC +
Preference number: 5 (lower is better)
Translates to: HTLRREVKDLSTLYM*AVAHTRMHTHARTH
Trigger: GTGTGTGCGCGCGTGTGTGTGCATGCGTGTGTGCGCAACTGCTCACATGTATAGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 90 bp CCAAAAGTTGTACGGCTGCTCAGTGGCAATGTCAGAATTCGAACTTaGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PKVVRLLSGNVRIRT*VCFLRMGVRGRVAS
Trigger: CGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAGCCGTACAACTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCACACTCGAGCTTCACCTaGGTTGTGGGCGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPHSSFT*VVGDCS
Trigger: ACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTG...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTCCGATGACATCGTACTaGAGTGAGAAGACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLPMTSY*SEKTRW
Trigger: CCACCTTGTCTTCTCACTCAAGTACGATGTCATCGG...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp ACCTGGGGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGCCGATGACATCGTACTaGAGTGAGAAGACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: TWGSRDLKKQGRVIGGPWPMTSY*SEKTRW
Trigger: CCACCTTGTCTTCTCACTCAAGTACGATGTCATCGG...CCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATGCGGGACTTTCCTCATaGGTGCTGAAGAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHAGLSS*VLKSSS
Trigger: GGAAGAACTCTTCAGCACCAATGAGGAAAGTCCCGC...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCGCGGGACTTTCCTCATaGGTGCTGAAGAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCAGLSS*VLKSSS
Trigger: GGAAGAACTCTTCAGCACCAATGAGGAAAGTCCCGC...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCATGGCGGTCGGGGGAGGCAAGGCCTGGACTCTCGGCCAGCTGAGACTCTTGAACATGATCTCCTTGTaGCGGAAGTTGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: SMAVGGGKAWTLGQLRLLNMISL*RKLQYT
Trigger: TGTGTACTGCAACTTCCGCAACAAGGAGATCATGTT...CAAGAGTCTCAGCTGGCCGAGAGTCCAGGCCTTGCCTCCCCCGACCGCCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCGTCCGCTCCTCCAGTTaGGCAAACTTCTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLVRSSS*ANFSAL
Trigger: CAAGGCAGAGAAGTTTGCCAAACTGGAGGAGCGGAC...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CCCATCCCCCATGAGGGGGTTACTTGTCTGTCATGTGTAGGCAGTGGACAGGGCCATATCACATCCTCCTaGTGCTGCCTCCAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: PIPHEGVTCLSCVGSGQGHITSS*CCLQGL
Trigger: TAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATG...GCCCTGTCCACTGCCTACACATGACAGACAAGTAACCCCCTCATGGGGGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCTCCAGGGACCTCAAGAAGCAGGGTAGGGTGATAGGAGGTCCCTGGGAAGAAACAGCAGAACCCAAATaGGAAACCAGGACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: GSRDLKKQGRVIGGPWEETAEPK*ETRTRL
Trigger: GAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTGT...TTCTTCCCAGGGACCTCCTATCACCCTACCCTGCTTCTTGAGGTCCCTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTACAGCAGAACCCAAATaGGAAACCAGGACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: GSQPSAHSPTYHILLVLPTAEPK*ETRTRL
Trigger: GAGCCGGGTCCTGGTTTCCAATTTGGGTTCTGCTGT...AGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CATGTGCTGCTCAGATGCTTCCAGCTGGATCTTGATCTCGGGACACGCAGGGTCCTTCCAAAATGGGTATaGGGGCCAGGAGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: HVLLRCFQLDLDLGTRRVLPKWV*GPGGWP
Trigger: AGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAAG...GACCCTGCGTGTCCCGAGATCAAGATCCAGCTGGAAGCATCTGAGCAGCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000471600.6
CDS CCA 90 bp CACTGCCATTCTCCATCTTGTCCTCGTCGCCGCCCAAGCCCATCATaGACTGGCTGTGGATGTGTAGTTCCTCATAGAGCGTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: HCHSPSCPRRRPSPS*TGCGCVVPHRASPG
Trigger: TCCTGGAGACGCTCTATGAGGAACTACACATCCACAGCCAGTCCATGATGGGCTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 90 bp TCAGTGGCAATGTCAGAATTCGAACTTGGGTCTGCTTCCTCCGAATaGGGGTCCGAGGGAGGGTGGCCTCGGTTGGCAGAGGTATTAACC +
Preference number: 5 (lower is better)
Translates to: SVAMSEFELGSASSE*GSEGGWPRLAEVLT
Trigger: GGTTAATACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAATTCTGACATTGCCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATCTCCGATGACATCGTACTaGAGTGAGAAGACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RLPGLDTAPSPCASVASSPMTSY*SEKTRW
Trigger: CCACCTTGTCTTCTCACTCAAGTACGATGTCATCGG...AGATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp GATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGGGCCACAGGCATATTCAGCATaGATCAGCTTTGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: DPRSGRLCPAETAQMGGPQAYSA*ISFVSK
Trigger: TTTGCTGACAAAGCTGATCAATGCTGAATATGCCTG...TGGCCCACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAATGAAGGAGTCCCGCTaGTGGGGTGTTCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: SQPSAHSPTYHILLVLPPMKESR*WGVPED
Trigger: ATCCTCAGGAACACCCCACAAGCGGGACTCCTTCAT...TGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCTTCCAAAATGGGTATaGGGGCCAGGAGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLLPKWV*GPGGWP
Trigger: AGGCCAGCCTCCTGGCCCCAATACCCATTTTGGAAG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS GCA 90 bp AGTAGCCCCGCAGCCCCAGTCACATGCATAAGCGCCACTATCATGTaGTTAGACACAAACACAGCAATGTCCACCCTGCACTCACCTCCC +
Preference number: 5 (lower is better)
Translates to: SSPAAPVTCISATIM*LDTNTAMSTLHSPP
Trigger: GGGAGGTGAGTGCAGGGTGGACATTGCTGTGTTTGTGTCTAAGCACATGATAGTGGCGCTTATGCATGTGACTGGGGCTGCGGGGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 90 bp TCTTCCCAGGGACAATCAGTGACTCTTCCACGGTTCCTATGCCTATaGCACTGCCCCGGCGTCCGAATCTACTCGCACTTTTCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SSQGQSVTLPRFLCL*HCPGVRIYSHFSQE
Trigger: TTCCTGGGAAAAGTGCGAGTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAGAGTCACTGATTGTCCCTGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS-3UTR CAA 90 bp CAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCGGCTCTTAAAGTCCTGCAGTTaGACCTTCTGGCCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QTCGRTGGSRRHTGHSRLLKSCS*TFWPRN
Trigger: ATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAA...GAGCCGGCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCCCTGATCCCAGGTCTGGACGGCTCTGCCCTGCAGAGACAGCCCAGATGGGTGCAGGCATATTCAGCATaGATCAGCTTTGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SLIPGLDGSALQRQPRWVQAYSA*ISFVSK
Trigger: TTTGCTGACAAAGCTGATCAATGCTGAATATGCCTG...CACCCATCTGGGCTGTCTCTGCAGGGCAGAGCCGTCCAGACCTGGGATCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGCTGCCATTCTCCATCTaGTCCTCGTCGCCGCCCAAG +
Preference number: 5 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWLPFSI*SSSPPK
Trigger: CTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAG...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGCATATCACATCCTCCTaGTGCTGCCTCCAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLHITSS*CCLQGL
Trigger: TAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATG...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGCCCCCTCCATGGACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: VTRHTRAPSSCAGLPPPWTSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...CCATGGAGGGGGCAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGCACTCGAGCTTCACCTaGGTTGTGGGCGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWHSSFT*VVGDCS
Trigger: ACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTG...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GTGGACAGGGCATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTTAAAGTCCTGCAGTTaGACCTTCTGGCCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: VDRASADLWQNWRVQEAYLKSCS*TFWPRN
Trigger: ATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAA...GTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATGCCCTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTGTTCCCTCTGAGTCCAGAGGGATGCTCAGGGGTGATGGAGGCCCAGGGAGGGTTAAAGTCCTGCAGTTaGACCTTCTGGCCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: LFPLSPEGCSGVMEAQGGLKSCS*TFWPRN
Trigger: ATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAA...CCCTCCCTGGGCCTCCATCACCCCTGAGCATCCCTCTGGACTCAGAGGGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp CTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGCCTCATAACATGATCTCCTTGTaGCGGAAGTTGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: LVCLGLTRHLPLVLLWPHNMISL*RKLQYT
Trigger: TGTGTACTGCAACTTCCGCAACAAGGAGATCATGTT...ATGAGGCCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CATCGGCAGACCTGTGGCAGAACTGGAGGGTCCAGGAGGCATACTGGGCACAGCCAGGCATATTCAGCATaGATCAGCTTTGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: HRQTCGRTGGSRRHTGHSQAYSA*ISFVSK
Trigger: TTTGCTGACAAAGCTGATCAATGCTGAATATGCCTG...GCTGTGCCCAGTATGCCTCCTGGACCCTCCAGTTCTGCCACAGGTCTGCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCTCCAGGGGCTAAGCTCCGAGAAGTGAAGGACTaGTCCACCCAAAAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: AHSPTYHILLVLPPGAKLREVKD*STQKLY
Trigger: GTACAACTTTTGGGTGGACAAGTCCTTCACTTCTCG...GAGCTTAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS GCA 90 bp CTCCGGCGAGAAGTGAAGGACTTGTCCACCCAAAAGTTGTACGGCTaGTCAGTGGCAATGTCAGAATTCGAACTTGGGTCTGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRREVKDLSTQKLYG*SVAMSEFELGSASS
Trigger: GGAGGAAGCAGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAGCCGTACAACTTTTGGGTGGACAAGTCCTTCACTTCTCGCCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTGCCGGGCTGTTAAAGTCCTGCAGTTaGACCTTCTGGCCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: RLKSVTRHTRAPSSCAGLLKSCS*TFWPRN
Trigger: ATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAA...CAGCCCGGCACAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp AGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTTCTGTGGTTAAAGTCCTGCAGTTaGACCTTCTGGCCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: RGLVCLGLTRHLPLVLLWLKSCS*TFWPRN
Trigger: ATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAA...CCACAGAAGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp TTGTGCTTCTGTGGCCTCATCTGCTCAGTTTCACCTTCAGAGGGGGTGGCCCGGAACATGATCTCCTTGTaGCGGAAGTTGCAGTACACA +
Preference number: 5 (lower is better)
Translates to: LCFCGLICSVSPSEGVARNMISL*RKLQYT
Trigger: TGTGTACTGCAACTTCCGCAACAAGGAGATCATGTT...CCGGGCCACCCCCTCTGAAGGTGAAACTGAGCAGATGAGGCCACAGAAGCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
CDS-3UTR CAA 90 bp CCGGCTCCCAACCCAGTGCTCACTCCCCCACATATCACATCCTCCTTGTGCTGCCAGGCATATTCAGCATaGATCAGCTTTGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: PAPNPVLTPPHITSSLCCQAYSA*ISFVSK
Trigger: TTTGCTGACAAAGCTGATCAATGCTGAATATGCCTG...GCAGCACAAGGAGGATGTGATATGTGGGGGAGTGAGCACTGGGTTGGGAGCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTATTGGCTCCGGATGACCCGCTaGAAAGACTCAAAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: YNCYRHPHGHRGFQNGYWLRMTR*KDSKKP
Trigger: CGGCTTCTTTGAGTCTTTCAAGCGGGTCATCCGGAG...CCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS GCA 90 bp ATAAATGCTCAGTCTTCCAGTTACTCACCCACCCTCAGTGAGCTGTaGCCAGATCCAGCCATACCTTGGGGTAGAGCACAGGATAGAACC +
Preference number: 5 (lower is better)
Translates to: INAQSSSYSPTLSEL*PDPAIPWGRAQDRT
Trigger: GGTTCTATCCTGTGCTCTACCCCAAGGTATGGCTGGATCTGGGCACAGCTCACTGAGGGTGGGTGAGTAACTGGAAGACTGAGCATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 90 bp TCCAGGCCTCCTCGGAACCCCTTAAAGTCCTGCAGTTTGACCTTCTaGCCAAGAAATTCAAGGAACTCCACGAAAGCGGGACTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SRPPRNPLKSCSLTF*PRNSRNSTKAGLSS
Trigger: TGAGGAAAGTCCCGCTTTCGTGGAGTTCCTTGAATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAAGGGGTTCCGAGGAGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS-3UTR CAA 90 bp GTGCTGCCTCCAGGGGCTAAGCTCTCCACACGGAGCTGTCTCAAACTCTCTCTCCAGGCATATTCAGCATaGATCAGCTTTGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: VLPPGAKLSTRSCLKLSLQAYSA*ISFVSK
Trigger: TTTGCTGACAAAGCTGATCAATGCTGAATATGCCTG...GAGAGAGAGTTTGAGACAGCTCCGTGTGGAGAGCTTAGCCCCTGGAGGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTAGATGAGTTCTCCGACTaGGGCTCCTGTGAGACGTGC +
Preference number: 5 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVDEFSD*GSCETC
Trigger: GCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATC...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTGCTACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: SGQRSRLPGLDTAPSPCATSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...AGCACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp GGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: GLQGRGLVCLGLTRHLPLTSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...AAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TGGTCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: WSSGQRSRLPGLDTAPSPTSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...AGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTTATACAACTGTTACCGACATCCACACGGCCACAGGGGCTTCCAAAATGGGTACATATCACATCCTCCTaGTGCTGCCTCCAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: FIQLLPTSTRPQGLPKWVHITSS*CCLQGL
Trigger: TAGCCCCTGGAGGCAGCACAAGGAGGATGTGATATG...TACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTAACAGTTGTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TCTTCAGGGCAGAGGTCTCGTCTGCCTGGGCTTGACACGGCACCTTCCCCTTGTACCTCTGAAATAATCTaGTCCATTTGTAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: SSGQRSRLPGLDTAPSPCTSEII*SICSRH
Trigger: ATGTCTGCTACAAATGGACAAGATTATTTCAGAGGT...ACAAGGGGAAGGTGCCGTGTCAAGCCCAGGCAGACGAGACCTCTGCCCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS-3UTR CAA 90 bp TTTGGCGTGACGCCTAAAAAGTGTGACCAGACACACAAGGGCTCCCAGCAGCTGTTAAAGTCCTGCAGTTaGACCTTCTGGCCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: FGVTPKKCDQTHKGSQQLLKSCS*TFWPRN
Trigger: ATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAA...CAGCTGCTGGGAGCCCTTGTGTGTCTGGTCACACTTTTTAGGCGTCACGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000471600.6
ENST00000542643.6
CDS TCA 90 bp CCAGTTTGGCAAACTTCTCTGCCTTGTAGCAGGCATATTCAGCATTaGTCAGCTTTGTCAGCAAAAATTCCTGGAACTCAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: PVWQTSLPCSRHIQH*SALSAKIPGTQAPS
Trigger: GGAAGGGGCCTGAGTTCCAGGAATTTTTGCTGACAAAGCTGATCAATGCTGAATATGCCTGCTACAAGGCAGAGAAGTTTGCCAAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp TCGGCACTCTGGTGCCCGCGGCCGCCGCTGCAGCTCTaGTCAGATGCGGCCGGCGCTCGCCGCCGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: SALWCPRPPLQL*SDAAGARRRRS
Trigger: ACTGCGGCGGCGGCGAGCGCCGGCCGCATCTGAGCAGAGCTGCAGCGGCGGCCGCGGGCACCAGAGTGCCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374765.9
CDS TCA 72 bp GCCGCGCCACGCCCTACCCGCCGTAGGCCCCGAAGGTaGAGCTGCGCTTCCGGCCGCTCATGGTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: AAPRPTRRRPRR*SCASGRSWCRR
Trigger: GCGGCGGCACCATGAGCGGCCGGAAGCGCAGCTTCACCTTCGGGGCCTACGGCGGGTAGGGCGTGGCGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 72 bp GCCATCGGAGCTGCCGCCACTCCATCCCGCACGCCCTaGGGCCTGTCCCGGGGGCAGAGGGGCAACGTCCCC +
Preference number: 6 (lower is better)
Translates to: AIGAAATPSRTP*GLSRGQRGNVP
Trigger: GGGGACGTTGCCCCTCTGCCCCCGGGACAGGCCCCAGGGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000611549.4
CDS GCA 72 bp CCAGGCCCCAAAGCAGGTGCTGAGTGCCATCGGAGCTaGCGCCACTCCATCCCGCACGCCCTGGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: PGPKAGAECHRS*RHSIPHALGPV
Trigger: GACAGGCCCCAGGGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS TCA 72 bp GGCGAAGCTGCTGGCACTGGACGAGGAGCGGGAGCTTaGGCGCCTCTGCTCTCTGCGCTGCGGTCTCCGCTC +
Preference number: 6 (lower is better)
Translates to: GEAAGTGRGAGA*APLLSALRSPL
Trigger: GAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS GCA 72 bp ACAGGCCCCAAAGCAGGTGCTGAGTGCCATCGGAGCTaGCGCCACTCCATCCCGCACGCCCTGGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: TGPKAGAECHRS*RHSIPHALGPV
Trigger: GACAGGCCCCAGGGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS GCA 72 bp CCACACCCTCCGTCTCCTCCACCACGCTGGCGAAGCTaGTGGCACTGGACGAGGAGCGGGAGCTTGAGCGCC +
Preference number: 6 (lower is better)
Translates to: PHPPSPPPRWRS*WHWTRSGSLSA
Trigger: GGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGTGGTGGAGGAGACGGAGGGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS GCA 72 bp CTGGCACAGGTACCAGGCCCCAAAGCAGGTGCTGAGTaGCATCGGAGCTGCCGCCACTCCATCCCGCACGCC +
Preference number: 6 (lower is better)
Translates to: LAQVPGPKAGAE*HRSCRHSIPHA
Trigger: GGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGGTACCTGTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS TCA 72 bp AGCTGCTGGCACTGGACGAGGAGCGGGAGAAGTCCTTaGGCGCCTCTGCTCTCTGCGCTGCGGTCTCCGCTC +
Preference number: 6 (lower is better)
Translates to: SCWHWTRSGRSP*APLLSALRSPL
Trigger: GAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS TCA 72 bp GGCTCTGGCACAGGTACCAGGCCCCAAAGCAGGTGCTaGGTGCCATCGGAGCTGCCGCCACTCCATCCCGCA +
Preference number: 6 (lower is better)
Translates to: GSGTGTRPQSRC*VPSELPPLHPA
Trigger: TGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGGTACCTGTGCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS CCA 72 bp GTGATATTCCAGCCGCCTTGGCCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGTGGCTGGTGGACACGG +
Preference number: 6 (lower is better)
Translates to: VIFQPPWPGRGC*ARSSRCGWWTR
Trigger: CCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
CDS CAA 90 bp GTCAGGGCAGAGGAGAGGGATGGCGCTCCATGCAGACCGGCGATATaGGGGGACGTGCGGCTGGGTGTAGGGCCTTTGGGTACCGGATCC +
Preference number: 6 (lower is better)
Translates to: VRAEERDGAPCRPAI*GDVRLGVGPLGTGS
Trigger: GGATCCGGTACCCAAAGGCCCTACACCCAGCCGCACGTCCCCCAATATCGCCGGTCTGCATGGAGCGCCATCCCTCTCCTCTGCCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS TCA 72 bp GGCAGAGGGGCAACGTCCCCAATATGGCCTCCGTCCTaGGAGCGAGCAGAGAACAGCGCGTGCAGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: GRGATSPIWPPS*ERAENSACRQP
Trigger: AGGCTGCCTGCACGCGCTGTTCTCTGCTCGCTCTCAGGACGGAGGCCATATTGGGGACGTTGCCCCTCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000611549.4
CDS TCA 72 bp TCTGCCCATCGCTCCTCCACACACTCCGGCGAGAAGTaGAGGACTTGTCCACCCCGCCGTAGGCCCCGAAGG +
Preference number: 6 (lower is better)
Translates to: SAHRSSTHSGEK*RTCPPRRRPRR
Trigger: CCTTCGGGGCCTACGGCGGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAGGAGCGATGGGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471600.6
ENST00000495204.5
CDS GCA 72 bp CGGCCCCGCGGACGACAACCTCTTCCACGGTTCCTATaGCTATGGCACTGCCCCGGCGTCCGAATCTACTCG +
Preference number: 6 (lower is better)
Translates to: RPRGRQPLPRFL*LWHCPGVRIYS
Trigger: CGAGTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAGAGGTTGTCGTCCGCGGGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000611549.4
CDS GCA 72 bp GGACAATCAGTGACAGGCCCCAAAGCAGGTGCTGAGTaGCATCGGAGCTGCCGCCACTCCATCCCGCACGCC +
Preference number: 6 (lower is better)
Translates to: GQSVTGPKAGAE*HRSCRHSIPHA
Trigger: GGCGTGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGTCACTGATTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS GCA 72 bp GCACCTCCTGTATGTTCTCGATGCCAATGGCGCTGCTaGGGCGGGAGCCGAACGGGCCCGACTTCTTCCTCG +
Preference number: 6 (lower is better)
Translates to: APPVCSRCQWRC*GGSRTGPTSSS
Trigger: CGAGGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACATACAGGAGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp CCTGCACCTCCTGTATGTTCTCGATGCCAATGGCGCTaGTGCGGCGGGAGCCGAACGGGCCCGACTTCTTCC +
Preference number: 6 (lower is better)
Translates to: PAPPVCSRCQWR*CGGSRTGPTSS
Trigger: GGAAGAAGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACATACAGGAGGTGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp CTGGCACTGGACGAGGAGCGGGAGCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTCCGCTCTGTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: LALDEERELERL*SLRCGLRSVLG
Trigger: ACCAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGCTCCCGCTCCTCGTCCAGTGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290101.8
CDS GCA 72 bp GAGGAGCGGGAGAAGTCCTTGAGCGCCTCTGCTCTCTaGGCTGCGGTCTCCGCTCTGTTCTTGGTCGTGGGC +
Preference number: 6 (lower is better)
Translates to: EEREKSLSASAL*AAVSALFLVVG
Trigger: GCCCACGACCAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp CGGGGTTGTTGGGCGCGAAGCTCCCGCTGTGGCTGGTaGACACGGTGTTGGGCTTCTTGTTGCTCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: RGCWARSSRCGW*TRCWASCCSAP
Trigger: TGGGGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp GGTCGGGGTTGTTGGGCGCGAAGCTCCCGCTGTGGCTaGTGGACACGGTGTTGGGCTTCTTGTTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: GRGCWARSSRCG*WTRCWASCCSA
Trigger: GGCTGAGCAACAAGAAGCCCAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp ATGATATTCCAGCCGCCTTGGCCAGGTCGGGGTTGTTaGGCGCGAAGCTCCCGCTGTGGCTGGTGGACACGG +
Preference number: 6 (lower is better)
Translates to: MIFQPPWPGRGC*ARSSRCGWWTR
Trigger: CCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp AAGCTGCTGGCACTGGACGAGGAGCGGGAGAAGTCCTaGAGCGCCTCTGCTCTCTGCGCTGCGGTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: KLLALDEEREKS*SASALCAAVSA
Trigger: AGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp AGTGATATTCCAGCCGCCTTGGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTGTGGCTGGTGGACACG +
Preference number: 6 (lower is better)
Translates to: SDIPAALARSGL*GAKLPLWLVDT
Trigger: CGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
CDS CAA 72 bp GAGGAGAGGGATGGCGCTCCATGCAGACCGGCGATATaGGGGGACGTGCGGCTGGGTGTAGGGCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: EERDGAPCRPAI*GDVRLGVGPLG
Trigger: ACCCAAAGGCCCTACACCCAGCCGCACGTCCCCCAATATCGCCGGTCTGCATGGAGCGCCATCCCTCTCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611549.4
CDS CAA 90 bp ACGCTGGCGAAGCTGCTGGCACTGGACGAGGAGCGGGAGAAGTCCTaGAGCGCCTCTGCTCTCTGCGCTGCGGTCTCCGCTCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: TLAKLLALDEEREKS*SASALCAAVSALFL
Trigger: CAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTCCTCGTCCAGTGCCAGCAGCTTCGCCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS TCA 72 bp CCAGGGACAATCAGTGACAGGCCCCAAAGCAGGTGCTaGGTGCCATCGGAGCTGCCGCCACTCCATCCCGCA +
Preference number: 6 (lower is better)
Translates to: PGTISDRPQSRC*VPSELPPLHPA
Trigger: TGCGGGATGGAGTGGCGGCAGCTCCGATGGCACTCAGCACCTGCTTTGGGGCCTGTCACTGATTGTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290101.8
ENST00000374763.6
CDS CCA 72 bp GGGCTGTGGGGTTGCACTCGAGCTTCACCTTGGTTGTaGGCGACTGCAGTGGCTCTGTCTCGGGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: GLWGCTRASPWL*ATAVALSRGCW
Trigger: CCAGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCCCACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp TCTTCTCCTGCACCTCCTGTATGTTCTCGATGCCAATaGCGCTGCTGCGGCGGGAGCCGAACGGGCCCGACT +
Preference number: 6 (lower is better)
Translates to: SSPAPPVCSRCQ*RCCGGSRTGPT
Trigger: AGTCGGGCCCGTTCGGCTCCCGCCGCAGCAGCGCCATTGGCATCGAGAACATACAGGAGGTGCAGGAGAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp GGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTaGCCTCGGTTGGCAGAGGTATTAACCCAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: GSASSEWGSEGG*PRLAEVLTQGP
Trigger: AGGCCCTTGGGTTAATACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317967.11
ENST00000542643.6
CDS CCA 72 bp GGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTaGCCTCGGTTGGCAGAGGTATTAACCTCCGGAGAC +
Preference number: 6 (lower is better)
Translates to: GSASSEWGSEGG*PRLAEVLTSGD
Trigger: GTCTCCGGAGGTTAATACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464457.1
CDS CCA 72 bp GGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTaGCCTCGGTTGGCAGAGGTATTAACCTCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GSASSEWGSEGG*PRLAEVLTSWQ
Trigger: CTGCCAGGAGGTTAATACCTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482984.5
CDS CAA 72 bp TGCGGGCTGTGGGGTTGCACTCGAGCTTCACCTTGGTaGTGGGCGACTGCAGTGGCTCTGTCTCGGGGATGC +
Preference number: 6 (lower is better)
Translates to: CGLWGCTRASPW*WATAVALSRGC
Trigger: GCATCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp AATGATATTCCAGCCGCCTTGGCCAGGTCGGGGTTGTaGGGCGCGAAGCTCCCGCTGTGGCTGGTGGACACG +
Preference number: 6 (lower is better)
Translates to: NDIPAALARSGL*GAKLPLWLVDT
Trigger: CGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp AGCAATGATATTCCAGCCGCCTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCGCTGTGGCTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: SNDIPAALARSG*LGAKLPLWLVD
Trigger: GTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp ATCAGTGATATTCCAGCCGCCTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCGCTGTGGCTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: ISDIPAALARSG*LGAKLPLWLVD
Trigger: GTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCACTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
CDS CAA 90 bp CCAGGGACAATCAGTGATATTCCAGCCGCCTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCGCTGTGGCTGGTGGACACGGTGTTG +
Preference number: 6 (lower is better)
Translates to: PGTISDIPAALARSG*LGAKLPLWLVDTVL
Trigger: CAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCACTGATTGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
CDS GCA 72 bp ACTGGACGAGGAGCGGGAGAAGTCCTTGAGCGCCTCTaGTCTCTGCGCTGCGGTCTCCGCTCTGTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: TGRGAGEVLERL*SLRCGLRSVLG
Trigger: ACCAAGAACAGAGCGGAGACCGCAGCGCAGAGAGCAGAGGCGCTCAAGGACTTCTCCCGCTCCTCGTCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp AGATGCGGGCTGTGGGGTTGCACTCGAGCTTCACCTTaGTTGTGGGCGACTGCAGTGGCTCTGTCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: RCGLWGCTRASP*LWATAVALSRG
Trigger: TCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp TCTTCCCAGGGACAATCAGTGATATTCCAGCCGCCTTaGCCAGGTCGGGGTTGTTGGGCGCGAAGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: SSQGQSVIFQPP*PGRGCWARSSR
Trigger: GCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCACTGATTGTCCCTGGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
CDS CAA 72 bp TCAAAGAAGCCGCCGCCCCCACTGCCATTCTCCATCTaGTCCTCGTCGCCGCCCAAGCCCATCATGGACTGG +
Preference number: 6 (lower is better)
Translates to: SKKPPPPLPFSI*SSSPPKPIMDW
Trigger: CCAGTCCATGATGGGCTTGGGCGGCGACGAGGACAAGATGGAGAATGGCAGTGGGGGCGGCGGCTTCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp CTCTTCCCAGGGACAATCAGTGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTGGGCGCGAAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: LFPGTISDIPAA*ARSGLLGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCACTGATTGTCCCTGGGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374761.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
CDS CAA 90 bp CCAGGAATAAGCAATGATATTCCAGCCGCCTTGGCCAGGTCGGGGTaGTTGGGCGCGAAGCTCCCGCTGTGGCTGGTGGACACGGTGTTG +
Preference number: 6 (lower is better)
Translates to: PGISNDIPAALARSG*LGAKLPLWLVDTVL
Trigger: CAACACCGTGTCCACCAGCCACAGCGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCATTGCTTATTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
ENST00000611549.4
CDS TCA 72 bp TGGGCGACTGCAGTGGCTCTGTCTCGGGGATGCTGGTaGTTTCGTGGTTGGTGCCCTCAATCCAGTAGCCCC +
Preference number: 6 (lower is better)
Translates to: WATAVALSRGCW*FRGWCPQSSSP
Trigger: GGGGCTACTGGATTGAGGGCACCAACCACGAAATCACCAGCATCCCCGAGACAGAGCCACTGCAGTCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp CCACCCTATACATGTGAGCAGTTGCGCACACACGCATaGACACACACGCGCGCACACACAGGCGGAGTAGCC +
Preference number: 6 (lower is better)
Translates to: PPYTCEQLRTHA*THTRAHTGGVA
Trigger: GGCTACTCCGCCTGTGTGTGCGCGCGTGTGTGTGCATGCGTGTGTGCGCAACTGCTCACATGTATAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 72 bp TCTCTGGGGAGCTCTGAGTGGATGAGTTCTCCGACTTaGGCTCCTGTGAGACGTGCCCGCTGTCTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: SLGSSEWMSSPT*APVRRARCLGS
Trigger: AGACCCCAGACAGCGGGCACGTCTCACAGGAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp AGCCGCAGGTGCTCTTGGTCCCCGATGACATCGTACTaGAGTGAGAAGACAAGGTGGCCGAGGGCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: SRRCSWSPMTSY*SEKTRWPRAAS
Trigger: GGACGCTGCCCTCGGCCACCTTGTCTTCTCACTCAAGTACGATGTCATCGGGGACCAAGAGCACCTGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290101.8
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp GGGTTGCACTCGAGCTTCACCTTGGTTGTGGGCGACTaGAGTGGCTCTGTCTCGGGGATGCTGGTGATTTCG +
Preference number: 6 (lower is better)
Translates to: GLHSSFTLVVGD*SGSVSGMLVIS
Trigger: CGAAATCACCAGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp CGAGAAAGTGCTTCCGGTAGATGCGGGCTGTGGGGTTaGACTCGAGCTTCACCTTGGTTGTGGGCGACTGCA +
Preference number: 6 (lower is better)
Translates to: RESASGRCGLWG*TRASPWLWATA
Trigger: TGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGCAACCCCACAGCCCGCATCTACCGGAAGCACTTTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp CTGCTCAGTGGCAATGTCAGAATTCGAACTTGGGTCTaGTTCCTCCGAATGGGGGTCCGAGGGAGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LLSGNVRIRTWV*FLRMGVRGRVA
Trigger: GGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS CCA 72 bp GGCTTCTTGTTGCTCAGCCCCATGGCATCCATGGACTaGCTGCGGCTCCGGATGACCCGCTTGAAAGACTCA +
Preference number: 6 (lower is better)
Translates to: GFLLLSPMASMD*LRLRMTRLKDS
Trigger: TGAGTCTTTCAAGCGGGTCATCCGGAGCCGCAGCCAGTCCATGGATGCCATGGGGCTGAGCAACAAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp CGCGGACGACAACCTCTTCCACGGTTCCTATGCCTATaGCACTGCCCCGGCGTCCGAATCTACTCGCACTTT +
Preference number: 6 (lower is better)
Translates to: RGRQPLPRFLCL*HCPGVRIYSHF
Trigger: AAAGTGCGAGTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAGAGGTTGTCGTCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000611549.4
CDS CCA 72 bp ATGTCAGAATTCGAACTTGGGTCTGCTTCCTCCGAATaGGGGTCCGAGGGAGGGTGGCCTCGGTTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: MSEFELGSASSE*GSEGGWPRLAE
Trigger: CTCTGCCAACCGAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAATTCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS CCA 72 bp ATTAACCTCCTGGCAGCAAAGGGGAGCAGGTCCACATaGACCACTCCACCACGGCGTTCACCCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: INLLAAKGSRST*TTPPRRSPFLL
Trigger: GAGGAGGAAGGGTGAACGCCGTGGTGGAGTGGTCCATGTGGACCTGCTCCCCTTTGCTGCCAGGAGGTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482984.5
CDS CAA 72 bp TCGCTCCTCCACACACTCCGGCGAGAAGTGAAGGACTaGTCCACCCTAGGCAGGGTAAGTGGCGCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: SLLHTLRREVKD*STLGRVSGAAV
Trigger: AACTGCAGCGCCACTTACCCTGCCTAGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAGGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447293.5
CDS CAA 90 bp CCCAAAAGTTGTACGGCTGCTCAGTGGCAATGTCAGAATTCGAACTaGGGTCTGCTTCCTCCGAATGGGGGTCCGAGGGAGGGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: PKSCTAAQWQCQNSN*GLLPPNGGPREGGL
Trigger: GAGGCCACCCTCCCTCGGACCCCCATTCGGAGGAAGCAGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAGCCGTACAACTTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS CAA 90 bp TTCTGCCCATCGCTCCTCCACACACTCCGGCGAGAAGTGAAGGACTaGTCCACCCTAGGCAGGGTAAGTGGCGCTGCAGTTTCCCCATTT +
Preference number: 6 (lower is better)
Translates to: FCPSLLHTLRREVKD*STLGRVSGAAVSPF
Trigger: AAATGGGGAAACTGCAGCGCCACTTACCCTGCCTAGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAGGAGCGATGGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447293.5
CDS GCA 72 bp CGACAACCTCTTCCACGGTTCCTATGCCTATGGCACTaGCCCGGCGTCCGAATCTACTCGCACTTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: RQPLPRFLCLWH*PGVRIYSHFSQ
Trigger: CTGGGAAAAGTGCGAGTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAGAGGTTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000611549.4
CDS GCA 72 bp TCCCAGGGACAATCAGTGACTCTTCCACGGTTCCTATaGCTATGGCACTGCCCCGGCGTCCGAATCTACTCG +
Preference number: 6 (lower is better)
Translates to: SQGQSVTLPRFL*LWHCPGVRIYS
Trigger: CGAGTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAGAGTCACTGATTGTCCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS CCA 72 bp GCACTCGAGCTTCACCTTGGTTGTGGGCGACTGCAGTaGCTCTGTCTCGGGGATGCTGGTGATTTCGTGGTT +
Preference number: 6 (lower is better)
Translates to: ALELHLGCGRLQ*LCLGDAGDFVV
Trigger: AACCACGAAATCACCAGCATCCCCGAGACAGAGCCACTGCAGTCGCCCACAACCAAGGTGAAGCTCGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp CCTCAGCCTGCACCACGACGTAGGCATGCAGGAAGTTaGACGCGATCATGTCGGGCACGAAAGGAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: PQPAPRRRHAGS*TRSCRARKECS
Trigger: AGAACACTCCTTTCGTGCCCGACATGATCGCGTCCAACTTCCTGCATGCCTACGTCGTGGTGCAGGCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp CTTTTCCCAGGAATAAGCAATGATATTCCAGCCGCCTaGGCCAGGTCGGGGTTGTTGGGCGCGAAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: LFPGISNDIPAA*ARSGLLGAKLP
Trigger: CGGGAGCTTCGCGCCCAACAACCCCGACCTGGCCAAGGCGGCTGGAATATCATTGCTTATTCCTGGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290101.8
ENST00000374763.6
ENST00000542643.6
ENST00000611549.4
CDS TCA 72 bp TCTGCCCATCGCTCCTCCACACACTCCGGCGAGAAGTaGAGGACTTGTCCACCCAAAAGTTGTACGGCTGCT +
Preference number: 6 (lower is better)
Translates to: SAHRSSTHSGEK*RTCPPKSCTAA
Trigger: AGCAGCCGTACAACTTTTGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAGGAGCGATGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS GCA 72 bp CAGTCTTCCAGTTACTCACCCACCCTCAGTGAGCTGTaGCCAGATCCAGCCATACCTTGGGGTAGAGCACAG +
Preference number: 6 (lower is better)
Translates to: QSSSYSPTLSEL*PDPAIPWGRAQ
Trigger: CTGTGCTCTACCCCAAGGTATGGCTGGATCTGGGCACAGCTCACTGAGGGTGGGTGAGTAACTGGAAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS GCA 72 bp GTATTAACCTCCGGAGACTGTGTGTGTGTGCAGGTGTaGGTACACAAGGTTTCTTCCCCAAGCCCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: VLTSGDCVCVQV*VHKVSSPSPGA
Trigger: GGCGCCTGGGCTTGGGGAAGAAACCTTGTGTACGCACACCTGCACACACACACAGTCTCCGGAGGTTAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464457.1
CDS GCA 72 bp TCAGTGACTCTTCCACGGTTCCTATGCCTATGGCACTaGCCCGGCGTCCGAATCTACTCGCACTTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SVTLPRFLCLWH*PGVRIYSHFSQ
Trigger: CTGGGAAAAGTGCGAGTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAGAGTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS CCA 72 bp TCTCCATCTTGTCCTCGTCGCCGCCCAAGCCCATCATaGACTGGCTGTGGATGTGTAGTTCCTCATAGAGCG +
Preference number: 6 (lower is better)
Translates to: SPSCPRRRPSPS*TGCGCVVPHRA
Trigger: CGCTCTATGAGGAACTACACATCCACAGCCAGTCCATGATGGGCTTGGGCGGCGACGAGGACAAGATGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CCA 72 bp TGTTCTTGGTCGTGGGCATCTCTGGGGAGCTCTGAGTaGATGAGTTCTCCGACTTGGGCTCCTGTGAGACGT +
Preference number: 6 (lower is better)
Translates to: CSWSWASLGSSE*MSSPTWAPVRR
Trigger: ACGTCTCACAGGAGCCCAAGTCGGAGAACTCATCCACTCAGAGCTCCCCAGAGATGCCCACGACCAAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CAA 72 bp TCGCTCCTCCACACACTCCGGCGAGAAGTGAAGGACTaGTCCACCCAAAAGTTGTACGGCTGCTCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: SLLHTLRREVKD*STQKLYGCSVA
Trigger: TGCCACTGAGCAGCCGTACAACTTTTGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAGGAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS TCA 72 bp TCTGCCCATCGCTCCTCCACACACTCCGGCGAGAAGTaGAGGACTTGTCCACCCTATACATGTGAGCAGTTG +
Preference number: 6 (lower is better)
Translates to: SAHRSSTHSGEK*RTCPPYTCEQL
Trigger: CAACTGCTCACATGTATAGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAGGAGCGATGGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS GCA 72 bp AGTGAAGGACTTGTCCACCCTATACATGTGAGCAGTTaGGCACACACGCATGCACACACACGCGCGCACACA +
Preference number: 6 (lower is better)
Translates to: SEGLVHPIHVSS*AHTHAHTRAHT
Trigger: TGTGTGCGCGCGTGTGTGTGCATGCGTGTGTGCGCAACTGCTCACATGTATAGGGTGGACAAGTCCTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CCA 72 bp GGACAATCAGTGACTCTTCCACGGTTCCTATGCCTATaGCACTGCCCCGGCGTCCGAATCTACTCGCACTTT +
Preference number: 6 (lower is better)
Translates to: GQSVTLPRFLCL*HCPGVRIYSHF
Trigger: AAAGTGCGAGTAGATTCGGACGCCGGGGCAGTGCCATAGGCATAGGAACCGTGGAAGAGTCACTGATTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542643.6
CDS CAA 72 bp CTCCTCTGTTTTGAGGGGCGGCGGGAAGGAGCAGCGTaGTTCATCCATCCTGCTTCCCTGCATCTTCTCAAT +
Preference number: 6 (lower is better)
Translates to: LLCFEGRREGAA*FIHPASLHLLN
Trigger: ATTGAGAAGATGCAGGGAAGCAGGATGGATGAACAACGCTGCTCCTTCCCGCCGCCCCTCAAAACAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290101.8
ENST00000317967.11
ENST00000374757.7
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000447293.5
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS CAA 90 bp TTCTGCCCATCGCTCCTCCACACACTCCGGCGAGAAGTGAAGGACTaGTCCACCCAAAAGTTGTACGGCTGCTCAGTGGCAATGTCAGAA +
Preference number: 6 (lower is better)
Translates to: FCPSLLHTLRREVKD*STQKLYGCSVAMSE
Trigger: TTCTGACATTGCCACTGAGCAGCCGTACAACTTTTGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAGGAGCGATGGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS TCA 72 bp GGAACTCCACGAAAGCGGGACTTTCCTCATTGGTGCTaGAGAGTTCTTCCTCGGAGGTCTGCCCAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: GTPRKRDFPHWC*RVLPRRSAQAS
Trigger: AGAAGCTTGGGCAGACCTCCGAGGAAGAACTCTTCAGCACCAATGAGGAAAGTCCCGCTTTCGTGGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp GCAGCCCCAGTCACATGCATAAGCGCCACTATCATGTaGTTAGACACAAACACAGCAATGTCCACCCTGCAC +
Preference number: 6 (lower is better)
Translates to: AAPVTCISATIM*LDTNTAMSTLH
Trigger: GTGCAGGGTGGACATTGCTGTGTTTGTGTCTAAGCACATGATAGTGGCGCTTATGCATGTGACTGGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374757.7
CDS CAA 90 bp CTCCACACACTCCGGCGAGAAGTGAAGGACTTGTCCACCCAAAAGTaGTACGGCTGCTCAGTGGCAATGTCAGAATTCGAACTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: LHTLRREVKDLSTQK*YGCSVAMSEFELGS
Trigger: AGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAGCCGTACAACTTTTGGGTGGACAAGTCCTTCACTTCTCGCCGGAGTGTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS CCA 72 bp CCTCGGAACCCCTTAAAGTCCTGCAGTTTGACCTTCTaGCCAAGAAATTCAAGGAACTCCACGAAAGCGGGA +
Preference number: 6 (lower is better)
Translates to: PRNPLKSCSLTF*PRNSRNSTKAG
Trigger: TCCCGCTTTCGTGGAGTTCCTTGAATTTCTTGGCCAGAAGGTCAAACTGCAGGACTTTAAGGGGTTCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290101.8
ENST00000374761.6
ENST00000374763.6
ENST00000374765.9
ENST00000471600.6
ENST00000495204.5
ENST00000542643.6
ENST00000611549.4
CDS GCA 72 bp GAAGGACTTGTCCACCCTAGGCAGGGTAAGTGGCGCTaGAGTTTCCCCATTTTAGACACGAAGAAATTGAGA +
Preference number: 6 (lower is better)
Translates to: EGLVHPRQGKWR*SFPILDTKKLR
Trigger: TCTCAATTTCTTCGTGTCTAAAATGGGGAAACTGCAGCGCCACTTACCCTGCCTAGGGTGGACAAGTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447293.5
CDS CCA 72 bp AGGACTTGTCCACCCAAAAGTTGTACGGCTGCTCAGTaGCAATGTCAGAATTCGAACTTGGGTCTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: RTCPPKSCTAAQ*QCQNSNLGLLP
Trigger: AGGAAGCAGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAGCCGTACAACTTTTGGGTGGACAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6
CDS CCA 72 bp AGAAGTGAAGGACTTGTCCACCCTAGGCAGGGTAAGTaGCGCTGCAGTTTCCCCATTTTAGACACGAAGAAA +
Preference number: 6 (lower is better)
Translates to: RSEGLVHPRQGK*RCSFPILDTKK
Trigger: TTTCTTCGTGTCTAAAATGGGGAAACTGCAGCGCCACTTACCCTGCCTAGGGTGGACAAGTCCTTCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447293.5
CDS GCA 72 bp GAAGTGAAGGACTTGTCCACCCAAAAGTTGTACGGCTaGTCAGTGGCAATGTCAGAATTCGAACTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: EVKDLSTQKLYG*SVAMSEFELGS
Trigger: AGACCCAAGTTCGAATTCTGACATTGCCACTGAGCAGCCGTACAACTTTTGGGTGGACAAGTCCTTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317967.11
ENST00000464457.1
ENST00000482984.5
ENST00000542643.6