RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAP1B (Homo sapiens)

Ensembl gene IDs: ENSG00000127314

Ensembl transcript IDs: ENST00000250559.14, ENST00000422358.6, ENST00000425247.6, ENST00000460800.5, ENST00000489473.6, ENST00000501412.2, ENST00000534899.5, ENST00000537460.5, ENST00000538877.5, ENST00000541386.5, ENST00000542018.5, ENST00000545720.6

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGAGAATGCCCTGACCATGAGAATATCCTGTACTGGTTCAGAGTaGAAGGATGGGGGAGGGGTAGTGGATGCCACTTCTTTCTTTGGT +
Preference number: 1 (lower is better)
Translates to: GENALTMRISCTGSE*KDGGGVVDATSFFG
Trigger: ACCAAAGAAAGAAGTGGCATCCACTACCCCTCCCCCATCCTTCCACTCTGAACCAGTACAGGATATTCTCATGGTCAGGGCATTCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 90 bp TCCGATTCTATTCCATTTCCAGTAGGGAAAGATACTTTTGTCAAGTaGCAGGGTCTCCCTATGTTATCCATGCTGGCCTCAAACCACCGG +
Preference number: 1 (lower is better)
Translates to: SDSIPFPVGKDTFVK*QGLPMLSMLASNHR
Trigger: CCGGTGGTTTGAGGCCAGCATGGATAACATAGGGAGACCCTGTCACTTGACAAAAGTATCTTTCCCTACTGGAAATGGAATAGAATCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 90 bp GCCTCCAATGTCAGTAACTCCAAGGTCCAACCCTTCAAATCTGACTaGACAGAAAATACATGTTCAAAGGTAGCTGACAAGCTGGCTGTG +
Preference number: 1 (lower is better)
Translates to: ASNVSNSKVQPFKSD*TENTCSKVADKLAV
Trigger: CACAGCCAGCTTGTCAGCTACCTTTGAACATGTATTTTCTGTGCAGTCAGATTTGAAGGGTTGGACCTTGGAGTTACTGACATTGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 90 bp TTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTCTCTaGAGTTTTCGTCCATGTGTTGGGCTCGTTGGTACTTTGATTCGT +
Preference number: 1 (lower is better)
Translates to: FISCPLPLFWDCSVL*SFRPCVGLVGTLIR
Trigger: ACGAATCAAAGTACCAACGAGCCCAACACATGGACGAAAACTTCAGAGAACACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 90 bp ATATCCTTCAGTTGCTTTCTTCATCTCCTTTCCCAGGTGCCCACATaGATCCCTCACATACATCCTTCTCGGTATTCTGTTTTGTTCACT +
Preference number: 1 (lower is better)
Translates to: ISFSCFLHLLSQVPT*IPHIHPSRYSVLFT
Trigger: AGTGAACAAAACAGAATACCGAGAAGGATGTATGTGAGGGATGCATGTGGGCACCTGGGAAAGGAGATGAAGAAAGCAACTGAAGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 90 bp AGATGCTGTATTCTCAATTGCTGCTCAGCTATTTGCCTTGTTCTCTaGCCATGTCTTTGTAATAGCAATCCTTTGTACTCCAACCCTTCT +
Preference number: 1 (lower is better)
Translates to: RCCILNCCSAICLVL*PCLCNSNPLYSNPS
Trigger: AGAAGGGTTGGAGTACAAAGGATTGCTATTACAAAGACATGGGCAGAGAACAAGGCAAATAGCTGAGCAGCAATTGAGAATACAGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 90 bp ATTAATTCTGCATATGTCATTAACTACATCCTGCCAAGGAGAGAATaGCCTGACCATGAGAATATCCTGTACTGGTTCAGAGTGGAAGGA +
Preference number: 1 (lower is better)
Translates to: INSAYVINYILPRRE*PDHENILYWFRVEG
Trigger: TCCTTCCACTCTGAACCAGTACAGGATATTCTCATGGTCAGGGCATTCTCTCCTTGGCAGGATGTAGTTAATGACATATGCAGAATTAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 90 bp ATTATAATAGTCTTAGGGAGATCAACACTGTGCAACTGGCTCCTCTaGTACAGTATGGAGGTAGGTAGTGGCACTGTAAAATGTCTTAAC +
Preference number: 1 (lower is better)
Translates to: IIIVLGRSTLCNWLL*YSMEVGSGTVKCLN
Trigger: GTTAAGACATTTTACAGTGCCACTACCTACCTCCATACTGTATCAGAGGAGCCAGTTGCACAGTGTTGATCTCCCTAAGACTATTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 90 bp CTTTGCCATAAAAGATGCTGTATTCTCAATTGCTGCTCAGCTATTTaGCTTGTTCTCTGCCCATGTCTTTGTAATAGCAATCCTTTGTAC +
Preference number: 1 (lower is better)
Translates to: LCHKRCCILNCCSAI*LVLCPCLCNSNPLY
Trigger: GTACAAAGGATTGCTATTACAAAGACATGGGCAGAGAACAAGGCAAATAGCTGAGCAGCAATTGAGAATACAGCATCTTTTATGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CCA 90 bp TTCTGGCTCTACCATTACCCCTCTCTGGGTTATCTTTCACACAGCTaGCAAATCTGTTGCTTTAGTTATGTAACATTTACTATTAGTCTC +
Preference number: 1 (lower is better)
Translates to: FWLYHYPSLGYLSHS*QICCFSYVTFTISL
Trigger: GAGACTAATAGTAAATGTTACATAACTAAAGCAACAGATTTGCCAGCTGTGTGAAAGATAACCCAGAGAGGGGTAATGGTAGAGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 90 bp TTTGTGATTCATAGGACGGCAGAAAAGAAGAGCCAAGAAAGTCTGTaGAGGGATGATTTCAGATTGTTAACGTTATTTCTCTTTGGAAAA +
Preference number: 1 (lower is better)
Translates to: FVIHRTAEKKSQESL*RDDFRLLTLFLFGK
Trigger: TTTTCCAAAGAGAAATAACGTTAACAATCTGAAATCATCCCTGCACAGACTTTCTTGGCTCTTCTTTTCTGCCGTCCTATGAATCACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 90 bp TACCTCCGATATTGTAAACAGCGCCTGAAACACGGTAGAGAATACTaGATGCATTTATTGATTCTCAGATACAAAAATCAGGTAGATATG +
Preference number: 1 (lower is better)
Translates to: YLRYCKQRLKHGREY*MHLLILRYKNQVDM
Trigger: CATATCTACCTGATTTTTGTATCTGAGAATCAATAAATGCATTCAGTATTCTCTACCGTGTTTCAGGCGCTGTTTACAATATCGGAGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 90 bp AATAAATGGATAAAAAGGCTATCTGGAGAAGCCCAAATTCATTTTTaGGAAGTGATTACAGAGACAAGAAACCCAACCCTAACGCTGAAT +
Preference number: 1 (lower is better)
Translates to: NKWIKRLSGEAQIHF*EVITETRNPTLTLN
Trigger: ATTCAGCGTTAGGGTTGGGTTTCTTGTCTCTGTAATCACTTCTCAAAAATGAATTTGGGCTTCTCCAGATAGCCTTTTTATCCATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 90 bp ATTTTAGTCTTACAAATCACAATGTTAAGGCTCACTGACAGATTATaGGACAAGCCTGCAAGCACTTTTAAGGCTTCTAAGGTAATAGTA +
Preference number: 1 (lower is better)
Translates to: ILVLQITMLRLTDRL*DKPASTFKASKVIV
Trigger: TACTATTACCTTAGAAGCCTTAAAAGTGCTTGCAGGCTTGTCTCATAATCTGTCAGTGAGCCTTAACATTGTGATTTGTAAGACTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCGGGGCTGGGGTGGTGTaGCTGGCATCTAGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPGAGVV*LASSGQ
Trigger: CTGCCCACTAGATGCCAGTCACACCACCCCAGCCCC...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATGGAAACATTTTTGGTTaGCACAACTTGGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNGNIFG*HNLGAG
Trigger: CCCAGCCCCCAAGTTGTGGCAACCAAAAATGTTTCC...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAGGCAGAGGTTGGGGTaGGCCAAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPRQRLG*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACCCCAACCTCTGCCT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAGGCAGAGAACTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVRQRTA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAGTTCTCTGCCT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAGCTGCTCGGGAGGCTaGGGCAGAGAACTGCTTGAA +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVSCSGG*GRELLE
Trigger: TTCAAGCAGTTCTCTGCCTCAGCCTCCCGAGCAGCT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGTGATCTCAGCTCACTaGAACCTCGGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAVISAH*NLGLPG
Trigger: ACCTGGGAGGCCGAGGTTGCAGTGAGCTGAGATCAC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCCACAACTTGGGGGCTaGGGTGGTGTGACTGGCATC +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVPQLGG*GGVTGI
Trigger: GATGCCAGTCACACCACCCCAGCCCCCAAGTTGTGG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAGCACTTTGGGAGGCTaGAGCAGATGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVASTLGG*SRWITR
Trigger: CCTCGTGATCCATCTGCTTCAGCCTCCCAAAGTGCT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAGGGTCTCACTCTATTaGCATCGTGGGGGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVRVSLY*HRGGAV
Trigger: CACTGCACCCCCACGATGGCAATAGAGTGAGACCCT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTGGTTGCCACAACTTaGGGGCTGGGGTGGTGTGAC +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLVATT*GLGWCD
Trigger: GTCACACCACCCCAGCCCCCAAGTTGTGGCAACCAA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATGCAGCATTTTATAGTTaGTCTTGGTTGCTGCTACAT +
Preference number: 2 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNAAFYS*SWLLLH
Trigger: ATGTAGCAGCAACCAAGATCAACTATAAAATGCTGC...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAGCTACTGCACCCTCTaGCTCCTGGGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVSYCTL*LLGSSD
Trigger: ATCGCTTGAACCCAGGAGGCAGAGGGTGCAGTAGCT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCTCTCTAGGGAGACCTaGGGGTCTGCTGATTCAGTT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLSRET*GSADSV
Trigger: AACTGAATCAGCAGACCCTCAGGTCTCCCTAGAGAG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCCTTCCTACTCCCCTCTaGTCCAAACCTACTGCACTG +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPLPTPL*SKPTAL
Trigger: CAGTGCAGTAGGTTTGGAGCAGAGGGGAGTAGGAAG...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCCCCAACAATCCAACTaGGGAACATCTGGCAATGTC +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVPQQSN*GTSGNV
Trigger: GACATTGCCAGATGTTCCCCAGTTGGATTGTTGGGG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGGGGTTTCACCATGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAGVSPC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGCCAACATGGTGAAACCCC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 90 bp GGTTCTCTCCGAGAGCCTCTAGGAGTACATCCTAACACTTTGATTTaGGACTTCGACCTTCAGAACTGTGAAAGAGTACATTTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: GSLREPLGVHPNTLI*DFDLQNCERVHFCC
Trigger: GCAACAGAAATGTACTCTTTCACAGTTCTGAAGGTCGAAGTCCAAAATCAAAGTGTTAGGATGTACTCCTAGAGGCTCTCGGAGAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 90 bp GGAACAGGTTCTCTCCGAGAGCCTCTAGGAGTACATCCTAACACTTaGATTTTGGACTTCGACCTTCAGAACTGTGAAAGAGTACATTTC +
Preference number: 2 (lower is better)
Translates to: GTGSLREPLGVHPNT*ILDFDLQNCERVHF
Trigger: GAAATGTACTCTTTCACAGTTCTGAAGGTCGAAGTCCAAAATCAAAGTGTTAGGATGTACTCCTAGAGGCTCTCGGAGAGAACCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTCTCACTGACAGATTATaGGACAAGCCTGCAAGCACT +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVALTDRL*DKPAST
Trigger: AGTGCTTGCAGGCTTGTCTCATAATCTGTCAGTGAG...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTGCAACTGGCTCCTCTaGTACAGTATGGAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVCNWLL*YSMEVG
Trigger: ACCTACCTCCATACTGTATCAGAGGAGCCAGTTGCA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAAGTGTGAGCCACCATaGCAGGCCAGACTGGATTAT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVKCEPP*QARLDY
Trigger: ATAATCCAGTCTGGCCTGGCATGGTGGCTCACACTT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTTGCCCATGCTGAAGTaGAGTGGTGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPLPMLK*SGVISA
Trigger: AGCTGAGATCACACCACTGCACTTCAGCATGGGCAA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCTCCCCATAACTACCTaGTGTACCATACCCATCCGA +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLPITT*CTIPIR
Trigger: TCGGATGGGTATGGTACAGCAGGTAGTTATGGGGAG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCTTGTCTCAAACTCCTaGCTTCCAGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLVSNS*LPVIHP
Trigger: TGGGTGGATCACTGGAAGCCAGGAGTTTGAGACAAG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 90 bp GTGCCCACATGCATCCCTCACATACATCCTTCTCGGTATTCTGTTTaGTTCACTTTGCACGGGAATCCTTCTAAGTCAACCTTTAAACAT +
Preference number: 2 (lower is better)
Translates to: VPTCIPHIHPSRYSV*FTLHGNPSKSTFKH
Trigger: ATGTTTAAAGGTTGACTTAGAAGGATTCCCGTGCAAAGTGAACAAAACAGAATACCGAGAAGGATGTATGTGAGGGATGCATGTGGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAGTTCTTCACCAGGGTaGTTTTGCCCTCCAAGTTCA +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPSSSPG*FCPPSS
Trigger: TGAACTTGGAGGGCAAAATCACCCTGGTGAAGAACT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTGCTGCTCAGCTATTTaGCTTGTTCTCTGCCCATGT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVCCSAI*LVLCPC
Trigger: ACATGGGCAGAGAACAAGGCAAATAGCTGAGCAGCA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTGTATCCTTGATCTCCTaGGATCAAGCAATCCTTCTG +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVVSLIS*DQAILL
Trigger: CAGAAGGATTGCTTGATCCCAGGAGATCAAGGATAC...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 90 bp CTACTCCCCTCTGCTCCAAACCTACTGCACTGCACATTAAAGAGTTaGACAGTTAATAGAATTTCCTGTTCTGAAATTAGTGCTCACAGG +
Preference number: 2 (lower is better)
Translates to: LLPSAPNLLHCTLKS*TVNRISCSEISAHR
Trigger: CCTGTGAGCACTAATTTCAGAACAGGAAATTCTATTAACTGTCAAACTCTTTAATGTGCAGTGCAGTAGGTTTGGAGCAGAGGGGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCGTATCCTTGGGGACGTaGAAAGGAATTCATGCCTTT +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPVSLGT*KGIHAF
Trigger: AAAGGCATGAATTCCTTTTCACGTCCCCAAGGATAC...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCATCAAGCAATCCTTCTaGATAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPIKQSF*IAGTTG
Trigger: ACCTGTAGTCCCAGCTATTCAGAAGGATTGCTTGAT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTATTGTAAACAGCGCCTaGAACACGGTAGAGAATACT +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVIVNSA*NTVENT
Trigger: AGTATTCTCTACCGTGTTTCAGGCGCTGTTTACAAT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGGTCTTTCCCATCATTaGCTTGTTAAACACCTTGCC +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVGLSHH*LVKHLA
Trigger: GGCAAGGTGTTTAACAAGTCAATGATGGGAAAGACC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTATGTTCAAAGGTAGCTaGCAAGCTGGCTGTGTTAAT +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVMFKGS*QAGCVN
Trigger: ATTAACACAGCCAGCTTGTCAGCTACCTTTGAACAT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCAGTTCAGAATGTTTTaGGTTATCTTGGAGCAGACC +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVQFRMF*VILEQT
Trigger: GGTCTGCTCCAAGATAACTCAAAACATTCTGAACTG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGACCTGAGGGTCTGCTaGTTCAGTTCAGAATGTTTT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVDLRVC*FSSECF
Trigger: AAAACATTCTGAACTGAATCAGCAGACCCTCAGGTC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTGGGCAGAAAATCCCTaGTGTACCTCCGATATTGTA +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPWAENP*CTSDIV
Trigger: TACAATATCGGAGGTACAGCAGGGATTTTCTGCCCA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAGGCACACACCACCGTaGCCGTCTAATTTTTGTTAT +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPRHTPP*PSNFCY
Trigger: ATAACAAAAATTAGACGGGCACGGTGGTGTGTGCCT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTCAACTGGGGAACATCTaGCAATGTCTGGAAACATTT +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAQLGNI*QCLETF
Trigger: AAATGTTTCCAGACATTGCCAGATGTTCCCCAGTTG...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCATCCTTCTGAATAGCTaGGACTACAGGTACAGACGT +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPILLNS*DYRYRR
Trigger: ACGTCTGTACCTGTAGTCCCAGCTATTCAGAAGGAT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCCAGTATGTTGCTTCTaGAACTGTAGAACTAGTCCA +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVPVCCF*NCRTSP
Trigger: TGGACTAGTTCTACAGTTCCAGAAGCAACATACTGG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 90 bp GCCATAAAAGATGCTGTATTCTCAATTGCTGCTCAGCTATTTGCCTaGTTCTCTGCCCATGTCTTTGTAATAGCAATCCTTTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: AIKDAVFSIAAQLFA*FSAHVFVIAILCTP
Trigger: TGGAGTACAAAGGATTGCTATTACAAAGACATGGGCAGAGAACAAGGCAAATAGCTGAGCAGCAATTGAGAATACAGCATCTTTTATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAAATATCAAATGTATTaGTTAGGCTGGGTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVKYQMY*LGWVRW
Trigger: CCACCGCACCCAGCCTAATCAATACATTTGATATTT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTACATCCTAACACTTTaGTTTTGGACTTCGACCTTC +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAYILTL*FWTSTF
Trigger: GAAGGTCGAAGTCCAAAATCAAAGTGTTAGGATGTA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTGCTGTATTCTCAATTaGTGCTCAGCTATTTGCCTT +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVACCILN*CSAICL
Trigger: AAGGCAAATAGCTGAGCAGCAATTGAGAATACAGCA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCCCATACCCAGTATGTTaGTTCTGGAACTGTAGAACT +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPPYPVC*FWNCRT
Trigger: AGTTCTACAGTTCCAGAAGCAACATACTGGGTATGG...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTTCTTCAAGTATCCTTaGGGACGTGAAAAGGAATTC +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAFFKYP*GREKEF
Trigger: GAATTCCTTTTCACGTCCCCAAGGATACTTGAAGAA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCATGCCAGGCCAGACTaGATTATATCATTTACTCCT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVHARPD*IISFTP
Trigger: AGGAGTAAATGATATAATCCAGTCTGGCCTGGCATG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAGTGAAAGACCACTCTaGTTTTCTCCTAAAACTCAA +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVASERPL*FSPKTQ
Trigger: TTGAGTTTTAGGAGAAAATCAGAGTGGTCTTTCACT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCTTATAGAGAATGACTaGATTGACTTCTGGGAACTG +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLIEND*IDFWEL
Trigger: CAGTTCCCAGAAGTCAATTCAGTCATTCTCTATAAG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAAGTCTGTGCAGGGATaGTTTCAGATTGTTAACGTT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVKSVQG*FQIVNV
Trigger: AACGTTAACAATCTGAAATCATCCCTGCACAGACTT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGAAAATGGTGCTTTTTaGCAAACCACAGCCTTATTC +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVENGAF*QTTALF
Trigger: GAATAAGGCTGTGGTTTGGCAAAAAGCACCATTTTC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCCCTTCAAATCTGACTaGACAGAAAATACATGTTCA +
Preference number: 2 (lower is better)
Translates to: FISSIRRLSPYFIALLRVPFKSD*TENTCS
Trigger: TGAACATGTATTTTCTGTGCAGTCAGATTTGAAGGG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGATTTGCCTTGTTCTCTaGCCATGTCTTTGTAATAGC +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVICLVL*PCLCNS
Trigger: GCTATTACAAAGACATGGGCAGAGAACAAGGCAAAT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTATTGTCTCATTTATGTaGGTCTGTAAGGAAAGTCAG +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAIVSFM*VCKESQ
Trigger: CTGACTTTCCTTACAGACCCACATAAATGAGACAAT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTCATCAAATAGCTACTaGACATTACCCAAAGGCATT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVSSNSY*TLPKGI
Trigger: AATGCCTTTGGGTAATGTTCAGTAGCTATTTGATGA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTATGATAGTGGCCAATaGTGTCCTCTTATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVYDSGQ*CPLISE
Trigger: TTCAGAAATAAGAGGACATCATTGGCCACTATCATA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTATCGATTCTCTAAGTaGTTAATCCACATCACTCAA +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAYRFSK*LIHITQ
Trigger: TTGAGTGATGTGGATTAAGCACTTAGAGAATCGATA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTCATTATTGGTTGATTTaGTCAGGAAATCTGACATTG +
Preference number: 2 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAHYWLI*SGNLTL
Trigger: CAATGTCAGATTTCCTGAGCAAATCAACCAATAATG...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTGTATTCTCAATTGCTaGTCAGCTATTTGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVCILNC*SAICLV
Trigger: AACAAGGCAAATAGCTGAGCAGCAATTGAGAATACA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTATCTTTCACACAGCTaGCAAATCTGTTGCTTTAGT +
Preference number: 2 (lower is better)
Translates to: MNHICLIKGGMREMKRKPYLSHS*QICCFS
Trigger: ACTAAAGCAACAGATTTGCCAGCTGTGTGAAAGATA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 90 bp AAAGTCAATCTACATGAGTTGTGCTCCCAAACTGCAGTTACTATTTaGTATAGGAGAAAATGGTGCTTTTTGCCAAACCACAGCCTTATT +
Preference number: 2 (lower is better)
Translates to: KVNLHELCSQTAVTI*YRRKWCFLPNHSLI
Trigger: AATAAGGCTGTGGTTTGGCAAAAAGCACCATTTTCTCCTATACAAAATAGTAACTGCAGTTTGGGAGCACAACTCATGTAGATTGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTATCACTGATTAATTaGTCCAGTAGCTGGCAAATA +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLSLIN*SSSWQI
Trigger: TATTTGCCAGCTACTGGAGCAATTAATCAGTGATAA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCAAAAGGTGGTTATGTaGATATTCAAACAATACCAG +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVQKVVM*IFKQYQ
Trigger: CTGGTATTGTTTGAATATCCACATAACCACCTTTTG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAATTGCTCCAGTAGCTaGCAAATACTTTCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: SAINDSFLALYLSSGTVVNCSSS*QILSKS
Trigger: ACTTTTTGAAAGTATTTGCCAGCTACTGGAGCAATT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp GTTGTTTCCCACCAGAGCAGTAGTTCTTCACCAGGGTaGTTTTGCCCTCCAAGTTCACCTCCCTTGTCCCCC +
Preference number: 3 (lower is better)
Translates to: VVSHQSSSSSPG*FCPPSSPPLSP
Trigger: GGGGGACAAGGGAGGTGAACTTGGAGGGCAAAATCACCCTGGTGAAGAACTACTGCTCTGGTGGGAAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp CTAAGACAGGGTCTCACTCTATTGCCATCGTGGGGGTaGAGTGGCGCGAACACAGTTCACTGTATCCTTGAT +
Preference number: 3 (lower is better)
Translates to: LRQGLTLLPSWG*SGANTVHCILD
Trigger: ATCAAGGATACAGTGAACTGTGTTCGCGCCACTGCACCCCCACGATGGCAATAGAGTGAGACCCTGTCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp CTTTTGTCAAGTGACAGGGTCTCCCTATGTTATCCATaGTGGCCTCAAACCACCGGAGCTCAAGAGTTCCTC +
Preference number: 3 (lower is better)
Translates to: LLSSDRVSLCYP*WPQTTGAQEFL
Trigger: GAGGAACTCTTGAGCTCCGGTGGTTTGAGGCCAGCATGGATAACATAGGGAGACCCTGTCACTTGACAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CCA 72 bp TTGATCTCCTGGGATCAAGCAATCCTTCTGAATAGCTaGGACTACAGGTACAGACGTGCACCACCATGCCCA +
Preference number: 3 (lower is better)
Translates to: LISWDQAILLNS*DYRYRRAPPCP
Trigger: TGGGCATGGTGGTGCACGTCTGTACCTGTAGTCCCAGCTATTCAGAAGGATTGCTTGATCCCAGGAGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CCA 72 bp TTGTCAAGTGACAGGGTCTCCCTATGTTATCCATGCTaGCCTCAAACCACCGGAGCTCAAGAGTTCCTCCTA +
Preference number: 3 (lower is better)
Translates to: LSSDRVSLCYPC*PQTTGAQEFLL
Trigger: TAGGAGGAACTCTTGAGCTCCGGTGGTTTGAGGCCAGCATGGATAACATAGGGAGACCCTGTCACTTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CCA 72 bp GTGGCGCGAACACAGTTCACTGTATCCTTGATCTCCTaGGATCAAGCAATCCTTCTGAATAGCTGGGACTAC +
Preference number: 3 (lower is better)
Translates to: VARTQFTVSLIS*DQAILLNSWDY
Trigger: GTAGTCCCAGCTATTCAGAAGGATTGCTTGATCCCAGGAGATCAAGGATACAGTGAACTGTGTTCGCGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCGGGGTTTCACCATGTaGGCCAGGCTTGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: FISSIRRLSPYFIALLRVRGFTM*ARLVSN
Trigger: GTTTGAGACAAGCCTGGCCAACATGGTGAAACCCCG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp GTCTTAGGGAGATCAACACTGTGCAACTGGCTCCTCTaGTACAGTATGGAGGTAGGTAGTGGCACTGTAAAA +
Preference number: 3 (lower is better)
Translates to: VLGRSTLCNWLL*YSMEVGSGTVK
Trigger: TTTTACAGTGCCACTACCTACCTCCATACTGTATCAGAGGAGCCAGTTGCACAGTGTTGATCTCCCTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CCA 72 bp GGCTGTGTTAATTCTGGCTCTACCATTACCCCTCTCTaGGTTATCTTTCACACAGCTGGCAAATCTGTTGCT +
Preference number: 3 (lower is better)
Translates to: GCVNSGSTITPL*VIFHTAGKSVA
Trigger: AGCAACAGATTTGCCAGCTGTGTGAAAGATAACCCAGAGAGGGGTAATGGTAGAGCCAGAATTAACACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTCACCAGGGTGATTTaGCCCTCCAAGTTCACCTCC +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVFTRVI*PSKFTS
Trigger: GGAGGTGAACTTGGAGGGCAAAATCACCCTGGTGAA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp GAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTaGACAACACATGTAAAGTGCTTAGAGCAATGGTGG +
Preference number: 3 (lower is better)
Translates to: ETQPLFHSIAEG*TTHVKCLEQWW
Trigger: CCACCATTGCTCTAAGCACTTTACATGTGTTGTTCAACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGCTCAGCTATTTGCCTaGTTCTCTGCCCATGTCTTT +
Preference number: 3 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAAQLFA*FSAHVF
Trigger: AAAGACATGGGCAGAGAACAAGGCAAATAGCTGAGC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTTGCTGCTCAGCTATTaGCCTTGTTCTCTGCCCATG +
Preference number: 3 (lower is better)
Translates to: MNHICLIKGGMREMKRKPLLLSY*PCSLPM
Trigger: CATGGGCAGAGAACAAGGCAAATAGCTGAGCAGCAA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCCTCTTTACTCTCCCTaGAACAAAAGCCTTGACGGG +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVPLYSP*NKSLDG
Trigger: CCCGTCAAGGCTTTTGTTCAAGGGAGAGTAAAGAGG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTCACTCATGGTTTCAGTaGCCTCCAATGTCAGTAACT +
Preference number: 3 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAHSWFQ*PPMSVT
Trigger: AGTTACTGACATTGGAGGCAACTGAAACCATGAGTG...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTGTAAAATGTCTTAACTaGCCAGGGCTAACCTGGTTG +
Preference number: 3 (lower is better)
Translates to: FISSIRRLSPYFIALLRVVKCLN*PGLTWL
Trigger: CAACCAGGTTAGCCCTGGCAAGTTAAGACATTTTAC...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGGGCTCGTTGGTACTTaGATTCGTATTTCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVGLVGT*IRISLA
Trigger: AGCCAGAGAAATACGAATCAAAGTACCAACGAGCCC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp GAAGTTTTCGTCCATGTGTTGGGCTCGTTGGTACTTTaGTTCGTATTTCTCTGGCTACAGTTAGAGCATCTT +
Preference number: 3 (lower is better)
Translates to: EVFVHVLGSLVL*FVFLWLQLEHL
Trigger: AAGATGCTCTAACTGTAGCCAGAGAAATACGAATCAAAGTACCAACGAGCCCAACACATGGACGAAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp GTCAGTAACTCCAAGGTCCAACCCTTCAAATCTGACTaGACAGAAAATACATGTTCAAAGGTAGCTGACAAG +
Preference number: 3 (lower is better)
Translates to: VSNSKVQPFKSD*TENTCSKVADK
Trigger: CTTGTCAGCTACCTTTGAACATGTATTTTCTGTGCAGTCAGATTTGAAGGGTTGGACCTTGGAGTTACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTCTGTAACTAATGTGTaGTTTCCCACCAGAGCAGTA +
Preference number: 3 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVASVTNV*FPTRAV
Trigger: TACTGCTCTGGTGGGAAACAACACATTAGTTACAGA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTGTAATAGCAATCCTTaGTACTCCAACCCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVCNSNP*YSNPSP
Trigger: GGGAGAAGGGTTGGAGTACAAAGGATTGCTATTACA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCCTAACACTTTGATTTaGGACTTCGACCTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: FISSIRRLSPYFIALLRVPNTLI*DFDLQN
Trigger: GTTCTGAAGGTCGAAGTCCAAAATCAAAGTGTTAGG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTATGCCACTTCTTTCTTaGGTGACATCCTCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: FISSIRRLSPYFIALLRVMPLLS*VTSSVK
Trigger: TTTCACAGAGGATGTCACCAAAGAAAGAAGTGGCAT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCATGAAGAGTTTATTTaGTGCAGGTCAGGGAGACCT +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVHEEFI*CRSGRP
Trigger: AGGTCTCCCTGACCTGCACAAAATAAACTCTTCATG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp ACTGGATTATATCATTTACTCCTTCCTACTCCCCTCTaGTCCAAACCTACTGCACTGCACATTAAAGAGTTT +
Preference number: 3 (lower is better)
Translates to: TGLYHLLLPTPL*SKPTALHIKEF
Trigger: AAACTCTTTAATGTGCAGTGCAGTAGGTTTGGAGCAGAGGGGAGTAGGAAGGAGTAAATGATATAATCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp CATAGGACGGCAGAAAAGAAGAGCCAAGAAAGTCTGTaGAGGGATGATTTCAGATTGTTAACGTTATTTCTC +
Preference number: 3 (lower is better)
Translates to: HRTAEKKSQESL*RDDFRLLTLFL
Trigger: GAGAAATAACGTTAACAATCTGAAATCATCCCTGCACAGACTTTCTTGGCTCTTCTTTTCTGCCGTCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAGAAAATGGTGCTTTTaGCCAAACCACAGCCTTATT +
Preference number: 3 (lower is better)
Translates to: FISSIRRLSPYFIALLRVRKWCF*PNHSLI
Trigger: AATAAGGCTGTGGTTTGGCAAAAAGCACCATTTTCT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCGAAATATCAAATGTATaGATTAGGCTGGGTGCGGTG +
Preference number: 3 (lower is better)
Translates to: MNHICLIKGGMREMKRKPEISNV*IRLGAV
Trigger: CACCGCACCCAGCCTAATCAATACATTTGATATTTC...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTTCCCATCATTGACTaGTTAAACACCTTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVFPIID*LNTLPA
Trigger: TGCTGGCAAGGTGTTTAACAAGTCAATGATGGGAAA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAAATGTTTTGGTAGGTaGTTAATGGCTCCCAAAGGC +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVKCFGR*LMAPKG
Trigger: GCCTTTGGGAGCCATTAACAACCTACCAAAACATTT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTATCTGTTTAGTAGTCTaGTTTCAACAGGTATCCCAA +
Preference number: 3 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAICLVV*FQQVSQ
Trigger: TTGGGATACCTGTTGAAACAAGACTACTAAACAGAT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGTTACCAATAGAGCTTaGTTCATTTGCTGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAVTNRA*FICCVF
Trigger: AAACACACAGCAAATGAACAAAGCTCTATTGGTAAC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTCAGTTCAGAATGTTTaGAGTTATCTTGGAGCAGAC +
Preference number: 3 (lower is better)
Translates to: SAINDSFLALYLSSGTVVSVQNV*SYLGAD
Trigger: GTCTGCTCCAAGATAACTCAAAACATTCTGAACTGA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp GATCTGATAGTTTATTTGACTGGTCTTTCCCATCATTaGCTTGTTAAACACCTTGCCAGCAGAGACTGGATT +
Preference number: 3 (lower is better)
Translates to: DLIVYLTGLSHH*LVKHLASRDWI
Trigger: AATCCAGTCTCTGCTGGCAAGGTGTTTAACAAGTCAATGATGGGAAAGACCAGTCAAATAAACTATCAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp ATCAGCTCTACAATGCACATTTCCATCAGCAATAAATaGTTCATTTCTTGCCCTTTACCTCTCTTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: ISSTMHISISNK*FISCPLPLFWD
Trigger: GTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGATGGAAATGTGCATTGTAGAGCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCACTGCAGTTACTATTTaGTATAGGAGAAAATGGTGC +
Preference number: 3 (lower is better)
Translates to: MNHICLIKGGMREMKRKPTAVTI*YRRKWC
Trigger: GCACCATTTTCTCCTATACAAAATAGTAACTGCAGT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCGATCTGATAGTTTATTaGACTGGTCTTTCCCATCAT +
Preference number: 3 (lower is better)
Translates to: MNHICLIKGGMREMKRKPDLIVY*TGLSHH
Trigger: ATGATGGGAAAGACCAGTCAAATAAACTATCAGATC...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp TTACAAATCACAATGTTAAGGCTCACTGACAGATTATaGGACAAGCCTGCAAGCACTTTTAAGGCTTCTAAG +
Preference number: 3 (lower is better)
Translates to: LQITMLRLTDRL*DKPASTFKASK
Trigger: CTTAGAAGCCTTAAAAGTGCTTGCAGGCTTGTCTCATAATCTGTCAGTGAGCCTTAACATTGTGATTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp CCATTAAGCACCAGAAAAGTCAATCTACATGAGTTGTaGTCCCAAACTGCAGTTACTATTTTGTATAGGAGA +
Preference number: 3 (lower is better)
Translates to: PLSTRKVNLHEL*SQTAVTILYRR
Trigger: TCTCCTATACAAAATAGTAACTGCAGTTTGGGAGCACAACTCATGTAGATTGACTTTTCTGGTGCTTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp AAAAGATGCTGTATTCTCAATTGCTGCTCAGCTATTTaGCTTGTTCTCTGCCCATGTCTTTGTAATAGCAAT +
Preference number: 3 (lower is better)
Translates to: KRCCILNCCSAI*LVLCPCLCNSN
Trigger: ATTGCTATTACAAAGACATGGGCAGAGAACAAGGCAAATAGCTGAGCAGCAATTGAGAATACAGCATCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp ACATACATCCTTCTCGGTATTCTGTTTTGTTCACTTTaGACGGGAATCCTTCTAAGTCAACCTTTAAACATC +
Preference number: 3 (lower is better)
Translates to: TYILLGILFCSL*TGILLSQPLNI
Trigger: GATGTTTAAAGGTTGACTTAGAAGGATTCCCGTGCAAAGTGAACAAAACAGAATACCGAGAAGGATGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CCA 72 bp CTGCAGATATACATAGACCTGGTACTAATTAGAGGATaGTATTTCCAAAAACTATCCCATCATCTCCTTACA +
Preference number: 3 (lower is better)
Translates to: LQIYIDLVLIRG*YFQKLSHHLLT
Trigger: TGTAAGGAGATGATGGGATAGTTTTTGGAAATACCATCCTCTAATTAGTACCAGGTCTATGTATATCTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp GCAGATGTGATTAAGCATTTTGAGATGAGATTATCCTaGAGTATGTGGGTAAGCCCTAAATGTCAAAACAAT +
Preference number: 3 (lower is better)
Translates to: ADVIKHFEMRLS*SMWVSPKCQNN
Trigger: ATTGTTTTGACATTTAGGGCTTACCCACATACTTCAGGATAATCTCATCTCAAAATGCTTAATCACATCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR TCA 72 bp TATTGTAAACAGCGCCTGAAACACGGTAGAGAATACTaGATGCATTTATTGATTCTCAGATACAAAAATCAG +
Preference number: 3 (lower is better)
Translates to: YCKQRLKHGREY*MHLLILRYKNQ
Trigger: CTGATTTTTGTATCTGAGAATCAATAAATGCATTCAGTATTCTCTACCGTGTTTCAGGCGCTGTTTACAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR GCA 72 bp TCTCTGGGTTATCTTTCACACAGCTGGCAAATCTGTTaGTTTAGTTATGTAACATTTACTATTAGTCTCATT +
Preference number: 3 (lower is better)
Translates to: SLGYLSHSWQIC*FSYVTFTISLI
Trigger: AATGAGACTAATAGTAAATGTTACATAACTAAAGCAACAGATTTGCCAGCTGTGTGAAAGATAACCCAGAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCTCTTTACTCTCCCTTaGACAAAAGCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNLFTLP*TKALTG
Trigger: CCCCGTCAAGGCTTTTGTTCAAGGGAGAGTAAAGAG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATGGGGTTTCACCATGTTaGCCAGGCTTGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNGVSPC*PGLSQT
Trigger: AGTTTGAGACAAGCCTGGCCAACATGGTGAAACCCC...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATTGTGGCATAATGCCATaGGAACAGGTTCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNCGIMP*EQVLSE
Trigger: CTCGGAGAGAACCTGTTCCCATGGCATTATGCCACA...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATAGTTCTTCACCAGGGTaGTTTTGCCCTCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNSSSPG*FCPPSS
Trigger: TGAACTTGGAGGGCAAAATCACCCTGGTGAAGAACT...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATGCAAAGGCATATATTTaGAAGACAACTTGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNAKAYI*KTTCRA
Trigger: CGCCCGGCAAGTTGTCTTTCAAATATATGCCTTTGC...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCCCGAGATCGCGCCACTaGACACCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPPRSRH*TPAWVT
Trigger: TGTCACCCAGGCTGGTGTGCAGTGGCGCGATCTCGG...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCCACAACTTGGGGGCTaGGGTGGTGTGACTGGCATC +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVPQLGG*GGVTGI
Trigger: GATGCCAGTCACACCACCCCAGCCCCCAAGTTGTGG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAGGCAGAGGTTGGGGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVRQRLG*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACCCCAACCTCTGCCT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATGGTCTTTCCCATCATTaGCTTGTTAAACACCTTGCC +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNGLSHH*LVKHLA
Trigger: GGCAAGGTGTTTAACAAGTCAATGATGGGAAAGACC...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATTGGGCAGAAAATCCCTaGTGTACCTCCGATATTGTA +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNWAENP*CTSDIV
Trigger: TACAATATCGGAGGTACAGCAGGGATTTTCTGCCCA...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATATCCTTCTGAATAGCTaGGACTACAGGTACAGACGT +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNILLNS*DYRYRR
Trigger: ACGTCTGTACCTGTAGTCCCAGCTATTCAGAAGGAT...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATATGTTCAAAGGTAGCTaGCAAGCTGGCTGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNMFKGS*QAGCVN
Trigger: ATTAACACAGCCAGCTTGTCAGCTACCTTTGAACAT...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAGGCAGAGAACTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPRQRTA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAGTTCTCTGCCT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAGCACTTTGGGAGGCTaGAGCAGATGGATCACGAGG +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVSTLGG*SRWITR
Trigger: CCTCGTGATCCATCTGCTTCAGCCTCCCAAAGTGCT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTGGTGTGACACTTGCTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVGVTLA*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAGCAAGTGTCACACC...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAGGGTCTCACTCTATTaGCATCGTGGGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVARVSLY*HRGGAV
Trigger: CACTGCACCCCCACGATGGCAATAGAGTGAGACCCT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTTGGTTGCCACAACTTaGGGGCTGGGGTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPLVATT*GLGWCD
Trigger: GTCACACCACCCCAGCCCCCAAGTTGTGGCAACCAA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCATGCCAGGCCAGACTaGATTATATCATTTACTCCT +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNHARPD*IISFTP
Trigger: AGGAGTAAATGATATAATCCAGTCTGGCCTGGCATG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCCAGTATGTTGCTTCTaGAACTGTAGAACTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNPVCCF*NCRTSP
Trigger: TGGACTAGTTCTACAGTTCCAGAAGCAACATACTGG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAACCTCACCCAAGTCTaGCACGGTGGCTCATGCCTA +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVNLTQV*HGGSCL
Trigger: TAGGCATGAGCCACCGTGCCAGACTTGGGTGAGGTT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCTTCCTACTCCCCTCTaGTCCAAACCTACTGCACTG +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVLPTPL*SKPTAL
Trigger: CAGTGCAGTAGGTTTGGAGCAGAGGGGAGTAGGAAG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTGCCCAGGCTGGAGTaGAATGGCACCATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLPRLE*NGTILA
Trigger: AGCCAAGATGGTGCCATTGCACTCCAGCCTGGGCAA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTCCCAGGTGCCCACATaGATCCCTCACATACATCCT +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVASQVPT*IPHIHP
Trigger: AGGATGTATGTGAGGGATGCATGTGGGCACCTGGGA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAGCCTCCCAAGCAGCTaGGATTACAGGCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPSLPSS*DYRQAP
Trigger: TGGTGCTTGCCTGTAATCCCAGCTGCTTGGGAGGCT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTTGCAACTGGCTCCTCTaGTACAGTATGGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVCNWLL*YSMEVG
Trigger: ACCTACCTCCATACTGTATCAGAGGAGCCAGTTGCA...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAGTTCGCAACTAGCCTaGCCAACATGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPSSQLA*PTWRNP
Trigger: GGGGTTTCTCCATGTTGGTCAGGCTAGTTGCGAACT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGGAAACATTTTTGGTTaGCACAACTTGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAGNIFG*HNLGAG
Trigger: CCCAGCCCCCAAGTTGTGGCAACCAAAAATGTTTCC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCCCTTCAAATCTGACTaGACAGAAAATACATGTTCA +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNPFKSD*TENTCS
Trigger: TGAACATGTATTTTCTGTGCAGTCAGATTTGAAGGG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTCTTGTCTCAAACTCCTaGCTTCCAGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVALVSNS*LPVIHP
Trigger: TGGGTGGATCACTGGAAGCCAGGAGTTTGAGACAAG...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 72 bp CTTGTTCTCTGCCCATGTCTTTGTAATAGCAATCCTTaGTACTCCAACCCTTCTCCCCATCCCAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: LVLCPCLCNSNP*YSNPSPHPKTV
Trigger: AACAGTCTTGGGATGGGGAGAAGGGTTGGAGTACAAAGGATTGCTATTACAAAGACATGGGCAGAGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 72 bp ATGGAGGTAGGTAGTGGCACTGTAAAATGTCTTAACTaGCCAGGGCTAACCTGGTTGGCATTCTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: MEVGSGTVKCLN*PGLTWLAFCIH
Trigger: ATGGATACAGAATGCCAACCAGGTTAGCCCTGGCAAGTTAAGACATTTTACAGTGCCACTACCTACCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAAGTGTGAGCCACCATaGCAGGCCAGACTGGATTAT +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPKCEPP*QARLDY
Trigger: ATAATCCAGTCTGGCCTGGCATGGTGGCTCACACTT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTGCCCATGCTGAAGTaGAGTGGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLPMLK*SGVISA
Trigger: AGCTGAGATCACACCACTGCACTTCAGCATGGGCAA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCCAAGGTGTGACACTTaGTTGAGCCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVPRCDT*LSPGVQ
Trigger: TTGAACTCCTGGGCTCAAGCAAGTGTCACACCTTGG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCAAAAGGTGGTTATGTaGATATTCAAACAATACCAG +
Preference number: 4 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNQKVVM*IFKQYQ
Trigger: CTGGTATTGTTTGAATATCCACATAACCACCTTTTG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCCCCCAACAATCCAACTaGGGAACATCTGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPPQQSN*GTSGNV
Trigger: GACATTGCCAGATGTTCCCCAGTTGGATTGTTGGGG...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 72 bp TCTCTCCGAGAGCCTCTAGGAGTACATCCTAACACTTaGATTTTGGACTTCGACCTTCAGAACTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLREPLGVHPNT*ILDFDLQNCER
Trigger: TCTTTCACAGTTCTGAAGGTCGAAGTCCAAAATCAAAGTGTTAGGATGTACTCCTAGAGGCTCTCGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTGTATCCTTGGGGACGTaGAAAGGAATTCATGCCTTT +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVVSLGT*KGIHAF
Trigger: AAAGGCATGAATTCCTTTTCACGTCCCCAAGGATAC...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCTCACTGACAGATTATaGGACAAGCCTGCAAGCACT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLTDRL*DKPAST
Trigger: AGTGCTTGCAGGCTTGTCTCATAATCTGTCAGTGAG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAGTTCACTGTATCCTTaGTCTCCTGGGATCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVASSLYP*SPGIKQ
Trigger: TTGCTTGATCCCAGGAGATCAAGGATACAGTGAACT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTTCCATCCTGTTTGGATaGCATACTGAGACCTATCCT +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVSILFG*HTETYP
Trigger: AGGATAGGTCTCAGTATGTCATCCAAACAGGATGGA...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTGGCTCGTTGGTACTTTaGTTCGTATTTCTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVGSLVL*FVFLWL
Trigger: TAGCCAGAGAAATACGAATCAAAGTACCAACGAGCC...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCCTGCCAAGGAGAGAATaGCCTGACCATGAGAATATC +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPLPRRE*PDHENI
Trigger: GATATTCTCATGGTCAGGGCATTCTCTCCTTGGCAG...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCGGTGAACCAAGATCGTaGCATTATACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPGEPRS*HYTPVW
Trigger: CCAGACTGGAGTATAATGGCACGATCTTGGTTCACC...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGAGAATATCCTGTACTaGTTCAGAGTGGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAENILY*FRVEGW
Trigger: CCATCCTTCCACTCTGAACCAGTACAGGATATTCTC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTTGCCAGGGCTAACCTaGTTGGCATTCTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPLPGLT*LAFCIH
Trigger: ATGGATACAGAATGCCAACCAGGTTAGCCCTGGCAA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAATGTTAAGGCTCACTaGCAGATTATGAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVNVKAH*QIMRQA
Trigger: GGCTTGTCTCATAATCTGTCAGTGAGCCTTAACATT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTATTGTAAACAGCGCCTaGAACACGGTAGAGAATACT +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAIVNSA*NTVENT
Trigger: AGTATTCTCTACCGTGTTTCAGGCGCTGTTTACAAT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCAGTCGAGCCAATTGTaGCAAATTTCACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVQSSQL*QISLAP
Trigger: AGGAGCAAGTGAAATTTGTCACAATTGGCTCGACTG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTGACTGTAGTGTTCTCTaGAGTTTTCGTCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVDCSVL*SFRPCV
Trigger: AACACATGGACGAAAACTTCAGAGAACACTACAGTC...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAGGCACACACCACCGTaGCCGTCTAATTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVRHTPP*PSNFCY
Trigger: ATAACAAAAATTAGACGGGCACGGTGGTGTGTGCCT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCCATACCCAGTATGTTaGTTCTGGAACTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVPYPVC*FWNCRT
Trigger: AGTTCTACAGTTCCAGAAGCAACATACTGGGTATGG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAGCCAAGAAAGTCTGTaGAGGGATGATTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVASQESL*RDDFRL
Trigger: CAATCTGAAATCATCCCTGCACAGACTTTCTTGGCT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGTATCCTTGATCTCCTaGGATCAAGCAATCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVVSLIS*DQAILL
Trigger: CAGAAGGATTGCTTGATCCCAGGAGATCAAGGATAC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCACCATTACCCCTCTCTaGGTTATCTTTCACACAGCT +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPTITPL*VIFHTA
Trigger: AGCTGTGTGAAAGATAACCCAGAGAGGGGTAATGGT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAAGTGCTTAGAGCAATaGTGGCACATCTTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVKCLEQ*WHILGC
Trigger: ACACCCTAAGATGTGCCACCATTGCTCTAAGCACTT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTTTTCGTCCATGTGTTaGGCTCGTTGGTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAFSSMC*ARWYFD
Trigger: ATCAAAGTACCAACGAGCCCAACACATGGACGAAAA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAAATATCAAATGTATTaGTTAGGCTGGGTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPKYQMY*LGWVRW
Trigger: CCACCGCACCCAGCCTAATCAATACATTTGATATTT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCGACCTTCAGAACTGTaGAAGAGTACATTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVRPSEL*KSTFLL
Trigger: CAACAGAAATGTACTCTTTCACAGTTCTGAAGGTCG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCTTATAGAGAATGACTaGATTGACTTCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVLIEND*IDFWEL
Trigger: CAGTTCCCAGAAGTCAATTCAGTCATTCTCTATAAG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAAGTCTGTGCAGGGATaGTTTCAGATTGTTAACGTT +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAKSVQG*FQIVNV
Trigger: AACGTTAACAATCTGAAATCATCCCTGCACAGACTT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGAAAATGGTGCTTTTTaGCAAACCACAGCCTTATTC +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAENGAF*QTTALF
Trigger: GAATAAGGCTGTGGTTTGGCAAAAAGCACCATTTTC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAATCTACATGAGTTGTaGTCCCAAACTGCAGTTACT +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVNLHEL*SQTAVT
Trigger: AGTAACTGCAGTTTGGGAGCACAACTCATGTAGATT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTATTTGCCTTGTTCTCTaGCCATGTCTTTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVICLVL*PCLCNS
Trigger: GCTATTACAAAGACATGGGCAGAGAACAAGGCAAAT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTTGCTGTATTCTCAATTaGTGCTCAGCTATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVCCILN*CSAICL
Trigger: AAGGCAAATAGCTGAGCAGCAATTGAGAATACAGCA...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAACCCCAAAACCCACTaGGTTGAATTAATCTCTAAC +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVANPKTH*VELISN
Trigger: GTTAGAGATTAATTCAACCCAGTGGGTTTTGGGGTT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTATGTGTTGGGCTCGTTaGTACTTTGATTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAMCWAR*YFDSYF
Trigger: GAAATACGAATCAAAGTACCAACGAGCCCAACACAT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTCATCAAATAGCTACTaGACATTACCCAAAGGCATT +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVASSNSY*TLPKGI
Trigger: AATGCCTTTGGGTAATGTTCAGTAGCTATTTGATGA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGCAGCATTTTATAGTTaGTCTTGGTTGCTGCTACAT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVAAFYS*SWLLLH
Trigger: ATGTAGCAGCAACCAAGATCAACTATAAAATGCTGC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAGTGAAAGACCACTCTaGTTTTCTCCTAAAACTCAA +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVSERPL*FSPKTQ
Trigger: TTGAGTTTTAGGAGAAAATCAGAGTGGTCTTTCACT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTACATCCTAACACTTTaGTTTTGGACTTCGACCTTC +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVYILTL*FWTSTF
Trigger: GAAGGTCGAAGTCCAAAATCAAAGTGTTAGGATGTA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTAAAGGAATGAGTAAGTaGAGTGAGAACTTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: FISSIRRLSPYFIALLRVKGMSK*SENFFH
Trigger: GTGGAAAAAGTTCTCACTTCACTTACTCATTCCTTT...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTGAAAATGCAAAGGAATaGGTAAGTGAAGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAENAKE*VSEVRT
Trigger: AGTTCTCACTTCACTTACTCATTCCTTTGCATTTTC...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGACATCTGGCAATGTCTaGAAACATTTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVTSGNV*KHFWLP
Trigger: TGGCAACCAAAAATGTTTCCAGACATTGCCAGATGT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTATCTTTCACACAGCTaGCAAATCTGTTGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAYLSHS*QICCFS
Trigger: ACTAAAGCAACAGATTTGCCAGCTGTGTGAAAGATA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTTTCATTCACACTCATaGTTTCAGTTGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVFHSHS*FQLPPM
Trigger: CATTGGAGGCAACTGAAACCATGAGTGTGAATGAAA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTGTTTTGAGTTATCTTaGAGCAGACCCATACTAGTC +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVCFELS*SRPILV
Trigger: GACTAGTATGGGTCTGCTCCAAGATAACTCAAAACA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
3UTR CAA 72 bp CTACATGAGTTGTGCTCCCAAACTGCAGTTACTATTTaGTATAGGAGAAAATGGTGCTTTTTGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: LHELCSQTAVTI*YRRKWCFLPNH
Trigger: GTGGTTTGGCAAAAAGCACCATTTTCTCCTATACAAAATAGTAACTGCAGTTTGGGAGCACAACTCATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCGGTAATTCTGTGGGATaGCAATGGTTAACAATATTC +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPGNSVG*QWLTIF
Trigger: GAATATTGTTAACCATTGTCATCCCACAGAATTACC...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTATGATAGTGGCCAATaGTGTCCTCTTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPYDSGQ*CPLISE
Trigger: TTCAGAAATAAGAGGACATCATTGGCCACTATCATA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTTCGACTTACATTTTTaGCTTCTGATGGGCTTATTG +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPFDLHF*LLMGLL
Trigger: CAATAAGCCCATCAGAAGTCAAAAATGTAAGTCGAA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR TCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCATTCAACTATTCTATTaGTGGGCATGCACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPIQLFY*WACTLF
Trigger: AAACAGAGTGCATGCCCATCAATAGAATAGTTGAAT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTTATCACTGATTAATTaGTCCAGTAGCTGGCAAATA +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVALSLIN*SSSWQI
Trigger: TATTTGCCAGCTACTGGAGCAATTAATCAGTGATAA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGAAAACCCAGGAAGTCTaGCTCCAAACTTTATATTCT +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVKTQEV*LQTLYS
Trigger: AGAATATAAAGTTTGGAGCCAGACTTCCTGGGTTTT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCATTGTCTCATTTATGTaGGTCTGTAAGGAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPIVSFM*VCKESQ
Trigger: CTGACTTTCCTTACAGACCCACATAAATGAGACAAT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTATAAACGTCATATACTaGAATCTAGTTCTGGACTCA +
Preference number: 4 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAINVIY*NLVLDS
Trigger: TGAGTCCAGAACTAGATTCCAGTATATGACGTTTAT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCATTATTGGTTGATTTaGTCAGGAAATCTGACATTG +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVHYWLI*SGNLTL
Trigger: CAATGTCAGATTTCCTGAGCAAATCAACCAATAATG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCCAAGGCATGAAGTCATaGTTTACTAAAGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPQGMKS*FTKVGK
Trigger: TTTTCCAACTTTAGTAAAGCATGACTTCATGCCTTG...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR GCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGATATCAGCTCTACAATaGACATTTCCATCAGCAATA +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVISALQ*TFPSAI
Trigger: TATTGCTGATGGAAATGTGCATTGTAGAGCTGATAT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCAATTGCTCCAGTAGCTaGCAAATACTTTCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: MNHICLIKGGMREMKRKPNCSSS*QILSKS
Trigger: ACTTTTTGAAAGTATTTGCCAGCTACTGGAGCAATT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CCA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGAAGAGAAAACCCTCTaGATATGTCTGAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: SAINDSFLALYLSSGTVVEEKTL*ICLKMK
Trigger: TTTCATTTTCAGACATATCCAGAGGGTTTTCTCTTC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS GCA 90 bp CTCGAGCCCAGGAGTCGAGGCTGCAGTGACCCATGTTTGTGCCACTaGACTCCAGCAAGTTCTGCCTGCCAGGTTCCAGCGATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LEPRSRGCSDPCLCH*TPASSACQVPAILL
Trigger: CAGGAGAATCGCTGGAACCTGGCAGGCAGAACTTGCTGGAGTGCAGTGGCACAAACATGGGTCACTGCAGCCTCGACTCCTGGGCTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545720.6
CDS-3UTR CAA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCGGGGTTTCACCATGTaGGCCAGGCTTGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNRGFTM*ARLVSN
Trigger: GTTTGAGACAAGCCTGGCCAACATGGTGAAACCCCG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCCAAGTTCACCTCCCTaGTCCCCCAACAATCCAACT +
Preference number: 5 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNPSSPP*SPNNPT
Trigger: AGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATTTGCTGCTCAGCTATTaGCCTTGTTCTCTGCCCATG +
Preference number: 5 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNLLLSY*PCSLPM
Trigger: CATGGGCAGAGAACAAGGCAAATAGCTGAGCAGCAA...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGAGGCAGAGAACTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVEAENC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAGTTCTCTGCCTC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCCCTATTTCATAGCATaGCTGAGGGTTGAACAACAC +
Preference number: 5 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNPYFIA*LRVEQH
Trigger: GTGTTGTTCAACCCTCAGCAATGCTATGAAATAGGG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTTTCACCAGGGTGATTTaGCCCTCCAAGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVAFTRVI*PSKFTS
Trigger: GGAGGTGAACTTGGAGGGCAAAATCACCCTGGTGAA...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCCAGGGCTAACCTGGTaGGCATTCTGTATCCATCCT +
Preference number: 5 (lower is better)
Translates to: FISSIRRLSPYFIALLRVPGLTW*AFCIHP
Trigger: AGGATGGATACAGAATGCCAACCAGGTTAGCCCTGG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAGGTGTGACACTTGCTaGAGCCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVARCDTC*SPGVQD
Trigger: GTCTTGAACTCCTGGGCTCAAGCAAGTGTCACACCT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTGGGGTTTCTCCACGTaGGCCAGGCTAGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: MNHICLIKGGMREMKRKPWGFST*ARLVSN
Trigger: GTTTGAGACTAGCCTGGCCAACGTGGAGAAACCCCA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATACTGCAGTTACTATTTaGTATAGGAGAAAATGGTGC +
Preference number: 5 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNTAVTI*YRRKWC
Trigger: GCACCATTTTCTCCTATACAAAATAGTAACTGCAGT...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCCAAGTTCACCTCCCTTGTCCCCCAACAATCCAACTGGGGAACATCTGGCAATCTAGCTGTTAGCTGTTaGCTAAATAGTAATTACCAG +
Preference number: 5 (lower is better)
Translates to: SKFTSLVPQQSNWGTSGNLAVSC*LNSNYQ
Trigger: CTGGTAATTACTATTTAGCAAACAGCTAACAGCTAG...ATTGCCAGATGTTCCCCAGTTGGATTGTTGGGGGACAAGGGAGGTGAACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCCCTCTTTACTCTCCCTaGAACAAAAGCCTTGACGGG +
Preference number: 5 (lower is better)
Translates to: MNHICLIKGGMREMKRKPPLYSP*NKSLDG
Trigger: CCCGTCAAGGCTTTTGTTCAAGGGAGAGTAAAGAGG...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTTGTAATAGCAATCCTTaGTACTCCAACCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: FISSIRRLSPYFIALLRVCNSNP*YSNPSP
Trigger: GGGAGAAGGGTTGGAGTACAAAGGATTGCTATTACA...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCGGGCTCGTTGGTACTTaGATTCGTATTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: MNHICLIKGGMREMKRKPGLVGT*IRISLA
Trigger: AGCCAGAGAAATACGAATCAAAGTACCAACGAGCCC...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTTCTGTAACTAATGTGTaGTTTCCCACCAGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: FISSIRRLSPYFIALLRVSVTNV*FPTRAV
Trigger: TACTGCTCTGGTGGGAAACAACACATTAGTTACAGA...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCACTCATGGTTTCAGTaGCCTCCAATGTCAGTAACT +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVHSWFQ*PPMSVT
Trigger: AGTTACTGACATTGGAGGCAACTGAAACCATGAGTG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGTGCAAAGGCATATATTaGAAAGACAACTTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVCKGIY*KDNLPG
Trigger: GCCCGGCAAGTTGTCTTTCAAATATATGCCTTTGCA...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGTAAAATGTCTTAACTaGCCAGGGCTAACCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVVKCLN*PGLTWL
Trigger: CAACCAGGTTAGCCCTGGCAAGTTAAGACATTTTAC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCGTGCCCGGCCCATTTaGCTTAATTTCAATTTCAAA +
Preference number: 5 (lower is better)
Translates to: FISSIRRLSPYFIALLRVRARPI*LNFNFK
Trigger: TTTGAAATTGAAATTAAGCAAAATGGGCCGGGCACG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGCTTCTGATGGGCTTATaGGGACATAACCCCATTGTA +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVLLMGL*GHNPIV
Trigger: TACAATGGGGTTATGTCCCAATAAGCCCATCAGAAG...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCATTAAAGTCTCACCTAATCCCAGACTTCCCTCAGAATCCTTGTAGAGTAGCTAGAAAATGGTGCTTTTaGCCAAACCACAGCCTTATT +
Preference number: 5 (lower is better)
Translates to: SLKSHLIPDFPQNPCRVARKWCF*PNHSLI
Trigger: AATAAGGCTGTGGTTTGGCAAAAAGCACCATTTTCT...AGCTACTCTACAAGGATTCTGAGGGAAGTCTGGGATTAGGTGAGACTTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCATGCCACTTCTTTCTTaGGTGACATCCTCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: MNHICLIKGGMREMKRKPMPLLS*VTSSVK
Trigger: TTTCACAGAGGATGTCACCAAAGAAAGAAGTGGCAT...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp ATGAATCACATATGTCTGATTAAAGGTGGGATGCGTGAGATGAAGAGAAAACCCTCAGTTCAGAATGTTTaGAGTTATCTTGGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: MNHICLIKGGMREMKRKPSVQNV*SYLGAD
Trigger: GTCTGCTCCAAGATAACTCAAAACATTCTGAACTGA...GGGTTTTCTCTTCATCTCACGCATCCCACCTTTAATCAGACATATGTGATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TTCATTAGCTCTATTAGGAGACTCAGCCCCTATTTCATAGCATTGCTGAGGGTTCTTATAAATCTCCCGTaGAAATCCTGTATGATCCAA +
Preference number: 5 (lower is better)
Translates to: FISSIRRLSPYFIALLRVLINLP*KSCMIQ
Trigger: TTGGATCATACAGGATTTCAACGGGAGATTTATAAG...AACCCTCAGCAATGCTATGAAATAGGGGCTGAGTCTCCTAATAGAGCTAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGATGGGCCATTTGGATTaGTTCTTATCTAAACTGCCT +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVMGHLD*FLSKLP
Trigger: AGGCAGTTTAGATAAGAACAAATCCAAATGGCCCAT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGAGCATCTTTTTATGTaGATGGGCCATTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVEHLFM*MGHLDL
Trigger: CAAATCCAAATGGCCCATCAACATAAAAAGATGCTC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS GCA 90 bp AATGCGAATGCAAAAAGACATGTATTTGTACGCTCTCAATCTCTGTaGTTAGCTCAAATTGTATTCCAGCATAACTCGTGTCATTCTGGA +
Preference number: 5 (lower is better)
Translates to: NANAKRHVFVRSQSL*LAQIVFQHNSCHSG
Trigger: TCCAGAATGACACGAGTTATGCTGGAATACAATTTGAGCTAAGCACAGAGATTGAGAGCGTACAAATACATGTCTTTTTGCATTCGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501412.2
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGATCTGTTTAGTAGTCTaGTTTCAACAGGTATCCCAA +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVICLVV*FQQVSQ
Trigger: TTGGGATACCTGTTGAAACAAGACTACTAAACAGAT...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS-3UTR CAA 90 bp TCAGCAATAAATGATTCATTTCTTGCCCTTTACCTCTCTTCTGGGACTGTAGTGGATCTGATAGTTTATTaGACTGGTCTTTCCCATCAT +
Preference number: 5 (lower is better)
Translates to: SAINDSFLALYLSSGTVVDLIVY*TGLSHH
Trigger: ATGATGGGAAAGACCAGTCAAATAAACTATCAGATC...CACTACAGTCCCAGAAGAGAGGTAAAGGGCAAGAAATGAATCATTTATTGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250559.14
CDS GCA 72 bp AGGAGTCGAGGCTGCAGTGACCCATGTTTGTGCCACTaGACTCCAGCAAGTTCTGCCTGCCAGGTTCCAGCG +
Preference number: 6 (lower is better)
Translates to: RSRGCSDPCLCH*TPASSACQVPA
Trigger: CGCTGGAACCTGGCAGGCAGAACTTGCTGGAGTGCAGTGGCACAAACATGGGTCACTGCAGCCTCGACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545720.6
CDS TCA 72 bp GCCTTTCTAAGTGGCCAAGATGGTTTATCTTATGAGTaGGACAGAAGGTCAATCTATTTGCTTGTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: AFLSGQDGLSYE*DRRSIYLLVRL
Trigger: AAGCCTCACAAGCAAATAGATTGACCTTCTGTCTCACTCATAAGATAAACCATCTTGGCCACTTAGAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501412.2
CDS CCA 72 bp AGGCTCCTACATTCTTCAATCCTTGTCACTATCAAATaGTTCCATCGAGGAGCTTTTGTTGTTGTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: RLLHSSILVTIK*FHRGAFVVVVV
Trigger: AACAACAACAACAACAAAAGCTCCTCGATGGAACCATTTGATAGTGACAAGGATTGAAGAATGTAGGAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541386.5
CDS CAA 90 bp TCAGTCTTGCTAGGTAGGGGACTGAAAGTAACATGGGGCTACTACTaGAAATGGATGGTCTGCTTTAAAGTTTATGTGTCAAATTACAAA +
Preference number: 6 (lower is better)
Translates to: SVLLGRGLKVTWGYY*KWMVCFKVYVSNYK
Trigger: TTTGTAATTTGACACATAAACTTTAAAGCAGACCATCCATTTCAAGTAGTAGCCCCATGTTACTTTCAGTCCCCTACCTAGCAAGACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460800.5
CDS GCA 72 bp GCAAAAAGACATGTATTTGTACGCTCTCAATCTCTGTaGTTAGCTCAAATTGTATTCCAGCATAACTCGTGT +
Preference number: 6 (lower is better)
Translates to: AKRHVFVRSQSL*LAQIVFQHNSC
Trigger: ACACGAGTTATGCTGGAATACAATTTGAGCTAAGCACAGAGATTGAGAGCGTACAAATACATGTCTTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000501412.2
CDS CCA 72 bp TCAAAACCTAGTACTTCAATCCTTGTCACTATCAAATaGTTCCATCGAGGAGCTTTTGTTGTTGTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: SKPSTSILVTIK*FHRGAFVVVVV
Trigger: AACAACAACAACAACAAAAGCTCCTCGATGGAACCATTTGATAGTGACAAGGATTGAAGTACTAGGTTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000422358.6
ENST00000425247.6
ENST00000489473.6
ENST00000534899.5
ENST00000537460.5
ENST00000538877.5
ENST00000542018.5
CDS CAA 72 bp GTGAGACAGAAGGTCAATCTATTTGCTTGTGAGGCTTaGCTAAGCTCTGAACTATTCATCAAATTATTTTCC +
Preference number: 6 (lower is better)
Translates to: VRQKVNLFACEA*LSSELFIKLFS
Trigger: GGAAAATAATTTGATGAATAGTTCAGAGCTTAGCAAAGCCTCACAAGCAAATAGATTGACCTTCTGTCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501412.2