Pregenerated sensors for RAP1A (Homo sapiens)
Ensembl gene IDs: ENSG00000116473Ensembl transcript IDs: ENST00000356415.5, ENST00000369709.3, ENST00000494982.1
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTCACACCTTGGGCCCAGAACCACAGGAGGCCGCTTCTCAGCATaGCCAACGAACATACATCATCCCCAATTCCCATTTAAAGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: MSHLGPRTTGGRFSA*PTNIHHPQFPFKAH Trigger: ATGAGCTTTAAATGGGAATTGGGGATGATGTATGTTCGTTGGGCATGCTGAGAAGCGGCCTCCTGTGGTTCTGGGCCCAAGGTGTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR TCA 90 bp | GATACTTTTCATCCTGCTCAGCAACCACAGATTTCCTTGCACATCTaGCTTCAGCTGGTCCTGCTCTGCATATCACTGTGTGCCAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: DTFHPAQQPQISLHI*LQLVLLCISLCARK Trigger: CTTTCTGGCACACAGTGATATGCAGAGCAGGACCAGCTGAAGTCAGATGTGCAAGGAAATCTGTGGTTGCTGAGCAGGATGAAAAGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 90 bp | CTTGCACATCTGACTTCAGCTGGTCCTGCTCTGCATATCACTGTGTaGCAGAAAGGCGTTTTTCTTGACAGTTCCACCTTTAACCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: LAHLTSAGPALHITV*QKGVFLDSSTFNPS Trigger: ACTTGGGTTAAAGGTGGAACTGTCAAGAAAAACGCCTTTCTGGCACACAGTGATATGCAGAGCAGGACCAGCTGAAGTCAGATGTGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR TCA 90 bp | TTATTAAGGTTTTTCCTCAAGAGGAACAGCCAATCTCTTGCTTCTTaGGAGAAGCAATTAGTGGGAAATGTATGTCACACCTTGGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LLRFFLKRNSQSLAS*EKQLVGNVCHTLGP Trigger: TGGGCCCAAGGTGTGACATACATTTCCCACTAATTGCTTCTCTCAAGAAGCAAGAGATTGGCTGTTCCTCTTGAGGAAAAACCTTAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR TCA 90 bp | AATGACTTAGACTTTCTAGGACTGGTCTGTCTCCTCCTTAATATTTaGGGACAAGGCACAGGGTTTTCTAAGCTTGTTTCTTTCCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: NDLDFLGLVCLLLNI*GQGTGFSKLVSFLF Trigger: GAAAAGGAAAGAAACAAGCTTAGAAAACCCTGTGCCTTGTCCTCAAATATTAAGGAGGAGACAGACCAGTCCTAGAAAGTCTAAGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 90 bp | GGAAGGTTTATTAAGGTTTTTCCTCAAGAGGAACAGCCAATCTCTTaGTTCTTGAGAGAAGCAATTAGTGGGAAATGTATGTCACACCTT | + |
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Preference number: 1 (lower is better) Translates to: GRFIKVFPQEEQPIS*FLREAISGKCMSHL Trigger: AAGGTGTGACATACATTTCCCACTAATTGCTTCTCTCAAGAAGCAAGAGATTGGCTGTTCCTCTTGAGGAAAAACCTTAATAAACCTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR CCA 90 bp | ATTATAACCTCAAAGAAGAAGAATATTTCAGTGAGGAGTAAATGGTaGCCATTTATGATGGCAAATCAAGGTGCCAAACACAGATTAGTT | + |
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Preference number: 1 (lower is better) Translates to: IITSKKKNISVRSKW*PFMMANQGAKHRLV Trigger: AACTAATCTGTGTTTGGCACCTTGATTTGCCATCATAAATGGCCACCATTTACTCCTCACTGAAATATTCTTCTTCTTTGAGGTTATAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCCATTGCACTCTAGCCTaGGCGACAGGGCGAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSHCTLA*ATGRDS Trigger: GGAGTCTCGCCCTGTCGCCCAGGCTAGAGTGCAATG...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCGATGCCACCCTGACCTaGCAACTGGCCCTAATACTT | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSDATLT*QLALIL Trigger: AAGTATTAGGGCCAGTTGTCAGGTCAGGGTGGCATC...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCGACTTCAGCTGGTCCTaGTCTGCATATCACTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSDFSWS*SAYHCV Trigger: CACACAGTGATATGCAGAGCAGGACCAGCTGAAGTC...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR CAA 90 bp | CTGGTCCTGCTCTGCATATCACTGTGTGCCAGAAAGGCGTTTTTCTaGACAGTTCCACCTTTAACCCAAGTGGACTGTATAAGATGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LVLLCISLCARKAFF*TVPPLTQVDCIRCD Trigger: GTCACATCTTATACAGTCCACTTGGGTTAAAGGTGGAACTGTCAAGAAAAACGCCTTTCTGGCACACAGTGATATGCAGAGCAGGACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCTTTCAGTTTAGTAAGTaGCAGGCTGACCACATGCCT | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSFQFSK*QADHMP Trigger: AGGCATGTGGTCAGCCTGTCACTTACTAAACTGAAA...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCAACCACAGATTTCCTTaGACATCTGACTTCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSNHRFP*TSDFSW Trigger: CCAGCTGAAGTCAGATGTGCAAGGAAATCTGTGGTT...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACCAGCTGGTCCTGCTCTaGATATCACTGTGTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNQLVLL*ISLCAR Trigger: TCTGGCACACAGTGATATGCAGAGCAGGACCAGCTG...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCTCCTCCTTAATATTTaGGGACAAGGCACAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNLLLNI*GQGTGF Trigger: AAACCCTGTGCCTTGTCCTCAAATATTAAGGAGGAG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATGAGATCCCTGAGCAATaGCTTAGACTTTCTAGGACT | + |
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Preference number: 2 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNEIPEQ*LRLSRT Trigger: AGTCCTAGAAAGTCTAAGTCATTGCTCAGGGATCTC...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR TCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACATTTCCTTGCACATCTaGCTTCAGCTGGTCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNISLHI*LQLVLL Trigger: GAGCAGGACCAGCTGAAGTCAGATGTGCAAGGAAAT...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCAGAAGAATATTTCAGTaGGGAGTAAATGGTGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSRRIFQ*GVNGGH Trigger: ATGGCCACCATTTACTCCTCACTGAAATATTCTTCT...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCTCTAGCATTCTGCTGTaGTTGCTTGCAAAGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSSSILL*LLAKEN Trigger: ATTTTCCTTTGCAAGCAATCACAGCAGAATGCTAGA...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACGACAGGCTGACCACATaGCTGGAAAATCTCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNDRLTT*LENLSK Trigger: CTTGCTGAGATTTTCCAGGCATGTGGTCAGCCTGTC...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCGAGAGAATGTCTCTATaGCTTTTTGTGAACCACACA | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSERMSL*LFVNHT Trigger: TGTGTGGTTCACAAAAAGGCATAGAGACATTCTCTC...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGCACATAACACTTCATTaGTGGACTCACACCCAACAA | + |
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Preference number: 2 (lower is better) Translates to: AWKISARHEHFFIPSCKEHITLH*WTHTQQ Trigger: TTGTTGGGTGTGAGTCCACCAATGAAGTGTTATGTG...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCTTCTTCATACCTAGTTaGAAAGAGACAGTATCTAGA | + |
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Preference number: 2 (lower is better) Translates to: MSSFQTLDKNPNHSALLSFFIPS*KETVSR Trigger: TCTAGATACTGTCTCTTTGCAACTAGGTATGAAGAA...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR CAA 90 bp | AATTCCCATTTAAAGCTCATTAATGTCTACAAAACAGAATCCACGTaGCCTTCCCAGAAAACAGAACTAGGAACCCAGTCAAAGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: NSHLKLINVYKTEST*PSQKTELGTQSKPP Trigger: TGGAGGCTTTGACTGGGTTCCTAGTTCTGTTTTCTGGGAAGGCAACGTGGATTCTGTTTTGTAGACATTAATGAGCTTTAAATGGGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACCTGCATATCACTGTGTaGCAGAAAGGCGTTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNLHITV*QKGVFL Trigger: AAGAAAAACGCCTTTCTGGCACACAGTGATATGCAG...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGATAACACTTCATTGGTaGACTCACACCCAACAAATT | + |
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Preference number: 2 (lower is better) Translates to: AWKISARHEHFFIPSCKEITLHW*THTQQI Trigger: AATTTGTTGGGTGTGAGTCCACCAATGAAGTGTTAT...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATAGACATATGCATAATTaGATAAGTAGAAGGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNRHMHN*ISRREV Trigger: CACTTCCCTTCTACTTATCCAATTATGCATATGTCT...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 72 bp | CTTGGGCCCAGAACCACAGGAGGCCGCTTCTCAGCATaGCCAACGAACATACATCATCCCCAATTCCCATTT | + |
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Preference number: 3 (lower is better) Translates to: LGPRTTGGRFSA*PTNIHHPQFPF Trigger: AAATGGGAATTGGGGATGATGTATGTTCGTTGGGCATGCTGAGAAGCGGCCTCCTGTGGTTCTGGGCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 72 bp | CTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTaGCCTTTTAAGCCTGGAGCTGATTCAAGAGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LFPDPGQESKPL*PFKPGADSRGD Trigger: ATCCCCTCTTGAATCAGCTCCAGGCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR TCA 72 bp | GCCTCAAAGCTCACATTTATTTCCCTCTCGGCAAGATaGGCTCTTTCCAGACCCTGGACAAGAATCCAAACC | + |
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Preference number: 3 (lower is better) Translates to: ASKLTFISLSAR*ALSRPWTRIQT Trigger: GGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCATCTTGCCGAGAGGGAAATAAATGTGAGCTTTGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 72 bp | CTGACTTCAGCTGGTCCTGCTCTGCATATCACTGTGTaGCAGAAAGGCGTTTTTCTTGACAGTTCCACCTTT | + |
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Preference number: 3 (lower is better) Translates to: LTSAGPALHITV*QKGVFLDSSTF Trigger: AAAGGTGGAACTGTCAAGAAAAACGCCTTTCTGGCACACAGTGATATGCAGAGCAGGACCAGCTGAAGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 72 bp | CACAGATTTCCTTGCACATCTGACTTCAGCTGGTCCTaGTCTGCATATCACTGTGTGCCAGAAAGGCGTTTT | + |
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Preference number: 3 (lower is better) Translates to: HRFPCTSDFSWS*SAYHCVPERRF Trigger: AAAACGCCTTTCTGGCACACAGTGATATGCAGAGCAGGACCAGCTGAAGTCAGATGTGCAAGGAAATCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCTCACATAACACTTCATaGGTGGACTCACACCCAACA | + |
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Preference number: 3 (lower is better) Translates to: MSSFQTLDKNPNHSALLSSHNTS*VDSHPT Trigger: TGTTGGGTGTGAGTCCACCAATGAAGTGTTATGTGA...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCTGCAAAAGGATTCCCTaGATGAAATTACAAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: MSSFQTLDKNPNHSALLSCKRIP*MKLQAV Trigger: CACAGCTTGTAATTTCATCAAGGGAATCCTTTTGCA...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CAA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACCAGGTACCCTTCCCTTaGGAACCAAGACTAAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNQVPFP*EPRLRS Trigger: ACTCCTTAGTCTTGGTTCCAAAGGGAAGGGTACCTG...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCAGTTTAAAGGTATGTTaGAGGGGTGTTTTAAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: MSSFQTLDKNPNHSALLSSLKVC*RGVLKQ Trigger: CTGCTTTAAAACACCCCTCAAACATACCTTTAAACT...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR TCA 72 bp | GACTTTCTAGGACTGGTCTGTCTCCTCCTTAATATTTaGGGACAAGGCACAGGGTTTTCTAAGCTTGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: DFLGLVCLLLNI*GQGTGFSKLVS Trigger: AGAAACAAGCTTAGAAAACCCTGTGCCTTGTCCTCAAATATTAAGGAGGAGACAGACCAGTCCTAGAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 72 bp | CACCTATCTCACTTTCTAACAGGATACTTTTCATCCTaGTCAGCAACCACAGATTTCCTTGCACATCTGACT | + |
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Preference number: 3 (lower is better) Translates to: HLSHFLTGYFSS*SATTDFLAHLT Trigger: AGTCAGATGTGCAAGGAAATCTGTGGTTGCTGAGCAGGATGAAAAGTATCCTGTTAGAAAGTGAGATAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR TCA 72 bp | TTAGAGGACCTTAAAATAAAAGATGCCACCCTGACCTaGCAACTGGCCCTAATACTTCATTCAAGTTCGCTA | + |
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Preference number: 3 (lower is better) Translates to: LEDLKIKDATLT*QLALILHSSSL Trigger: TAGCGAACTTGAATGAAGTATTAGGGCCAGTTGTCAGGTCAGGGTGGCATCTTTTATTTTAAGGTCCTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR-3UTR CAA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATAGAAAGTTTTACTGGTaGATGAGATGTCTGTCTATG | + |
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Preference number: 3 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNRKFYW*MRCLSM Trigger: CATAGACAGACATCTCATCAACCAGTAAAACTTTCT...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR GCA 72 bp | ATTAAGGTTTTTCCTCAAGAGGAACAGCCAATCTCTTaGTTCTTGAGAGAAGCAATTAGTGGGAAATGTATG | + |
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Preference number: 3 (lower is better) Translates to: IKVFPQEEQPIS*FLREAISGKCM Trigger: CATACATTTCCCACTAATTGCTTCTCTCAAGAAGCAAGAGATTGGCTGTTCCTCTTGAGGAAAAACCTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCTCGGCCGTGGCTCCTaGTCCGGCTCTGCGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNLGRGS*SGSARR Trigger: TCGCCGCGCAGAGCCGGAGCAGGAGCCACGGCCGAG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCCCTCCTCTCGGCCGTaGCTCCTGCTCCGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNPSSRP*LLLRLC Trigger: GCAGAGCCGGAGCAGGAGCCACGGCCGAGAGGAGGG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCATTGCACTCTAGCCTaGGCGACAGGGCGAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNHCTLA*ATGRDS Trigger: GGAGTCTCGCCCTGTCGCCCAGGCTAGAGTGCAATG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATTCCCTCTCGGCAAGATaGGCTCTTTCCAGACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNSLSAR*ALSRPW Trigger: CCAGGGTCTGGAAAGAGCTCATCTTGCCGAGAGGGA...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCCAGCTGGTCCTGCTCTaGATATCACTGTGTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSQLVLL*ISLCAR Trigger: TCTGGCACACAGTGATATGCAGAGCAGGACCAGCTG...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGCGGAGACTGAGCCATTaGACTCTAGCCTGGGCGACA | + |
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Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKERRLSH*TLAWAT Trigger: TGTCGCCCAGGCTAGAGTGCAATGGCTCAGTCTCCG...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCGACAGGCTGACCACATaGCTGGAAAATCTCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSDRLTT*LENLSK Trigger: CTTGCTGAGATTTTCCAGGCATGTGGTCAGCCTGTC...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGGATGCCACCCTGACCTaGCAACTGGCCCTAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKEDATLT*QLALIL Trigger: AAGTATTAGGGCCAGTTGTCAGGTCAGGGTGGCATC...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATATGTATGTCACACCTTaGGCCCAGAACCACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNMYVTP*AQNHRR Trigger: CCTCCTGTGGTTCTGGGCCCAAGGTGTGACATACAT...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCAAATTGCTCTGTCCCTaGAGTATCCAGGATTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSKLLCP*SIQDFE Trigger: CTCGAAATCCTGGATACTGCAGGGACAGAGCAATTT...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACAGTATTAACCGATGTTaGAGCTCCCCCTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNSINRC*SSPWWR Trigger: CCTCCACCAGGGGGAGCTTCAACATCGGTTAATACT...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCCCTCCTCCAAATACCTaGCAATTTCTTCACACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSPPPNT*QFLHTL Trigger: CAAAGTGTGAAGAAATTGTCAGGTATTTGGAGGAGG...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATGAATCCAAACCACTCTaGCCTTTTAAGCCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNESKPL*PFKPGA Trigger: AGCTCCAGGCTTAAAAGGGCAGAGTGGTTTGGATTC...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCCACATAACACTTCATTaGTGGACTCACACCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSHITLH*WTHTQQ Trigger: TTGTTGGGTGTGAGTCCACCAATGAAGTGTTATGTG...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGGAGATCCCTGAGCAATaGCTTAGACTTTCTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKEEIPEQ*LRLSRT Trigger: AGTCCTAGAAAGTCTAAGTCATTGCTCAGGGATCTC...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCCTCTATGCCTTTTTGTaGACCACACAGTGTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSLYAFL*TTQCLC Trigger: ACATAAACACTGTGTGGTTCACAAAAAGGCATAGAG...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATAATGGTGGCCATTTATaGTGGCAAATCAAGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNNGGHL*WQIKVP Trigger: TGGCACCTTGATTTGCCATCATAAATGGCCACCATT...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACGACTTCAGCTGGTCCTaGTCTGCATATCACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNDFSWS*SAYHCV Trigger: CACACAGTGATATGCAGAGCAGGACCAGCTGAAGTC...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATAACCACAGATTTCCTTaGACATCTGACTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNNHRFP*TSDFSW Trigger: CCAGCTGAAGTCAGATGTGCAAGGAAATCTGTGGTT...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACGGCCGCTTCTCAGCATaGCCAACGAACATACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNGRFSA*PTNIHH Trigger: ATGATGTATGTTCGTTGGGCATGCTGAGAAGCGGCC...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCGAACAGCCAATCTCTTaGTTCTTGAGAGAAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSEQPIS*FLREAI Trigger: AATTGCTTCTCTCAAGAAGCAAGAGATTGGCTGTTC...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR CAA 72 bp | CTCTGCATATCACTGTGTGCCAGAAAGGCGTTTTTCTaGACAGTTCCACCTTTAACCCAAGTGGACTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LCISLCARKAFF*TVPPLTQVDCI Trigger: TATACAGTCCACTTGGGTTAAAGGTGGAACTGTCAAGAAAAACGCCTTTCTGGCACACAGTGATATGCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
||
| CDS-3UTR TCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCAATCTCTTGCTTCTTaGGAGAAGCAATTAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNQSLAS*EKQLVG Trigger: TCCCACTAATTGCTTCTCTCAAGAAGCAAGAGATTG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGCTGCATATCACTGTGTaGCAGAAAGGCGTTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKELHITV*QKGVFL Trigger: AAGAAAAACGCCTTTCTGGCACACAGTGATATGCAG...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATGGATACTTTTCATCCTaGTCAGCAACCACAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNGYFSS*SATTDF Trigger: GAAATCTGTGGTTGCTGAGCAGGATGAAAAGTATCC...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGGCCAACCAAAATCATTaGAACATCTTCCGTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKEANQNH*NIFRVL Trigger: AAGGACACGGAAGATGTTCCAATGATTTTGGTTGGC...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACGCTCTTTCCAGACCCTaGACAAGAATCCAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNALSRP*TRIQTT Trigger: AGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGC...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCATAAATACTAAAAGCTaGGTAGTTAGACCGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MSSFQTLDKNPNHSALLSINTKS*VVRPPQ Trigger: TTGAGGCGGTCTAACTACCCAGCTTTTAGTATTTAT...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACCTCCTCCTTAATATTTaGGGACAAGGCACAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNLLLNI*GQGTGF Trigger: AAACCCTGTGCCTTGTCCTCAAATATTAAGGAGGAG...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACTTTCAGTTTAGTAAGTaGCAGGCTGACCACATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNFQFSK*QADHMP Trigger: AGGCATGTGGTCAGCCTGTCACTTACTAAACTGAAA...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGAGAAGAATATTTCAGTaGGGAGTAAATGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKERRIFQ*GVNGGH Trigger: ATGGCCACCATTTACTCCTCACTGAAATATTCTTCT...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATTCTAGCATTCTGCTGTaGTTGCTTGCAAAGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNSSILL*LLAKEN Trigger: ATTTTCCTTTGCAAGCAATCACAGCAGAATGCTAGA...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGAGACAGGGCAATAAATaGACTGCACATTCAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKERQGNK*TAHSTN Trigger: GTTTGTTGAATGTGCAGTCCATTTATTGCCCTGTCT...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGTCGTTAAACGTGGACTaGGCTGTAATAGAATATACT | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKESLNVD*AVIEYT Trigger: AGTATATTCTATTACAGCTCAGTCCACGTTTAACGA...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR TCA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCTGAGGCACATAAACTaGCAAATACATGTGTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNLRHIN*QIHVYL Trigger: TAGATACACATGTATTTGTCAGTTTATGTGCCTCAG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGTTCTTCATACCTAGTTaGAAAGAGACAGTATCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWKISARHEHFFIPSCKEFFIPS*KETVSR Trigger: TCTAGATACTGTCTCTTTGCAACTAGGTATGAAGAA...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR GCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACGATGGCAAATCAAGGTaGCAAACACAGATTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNDGKSR*QTQISS Trigger: TGAACTAATCTGTGTTTGGCACCTTGATTTGCCATC...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CCA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACGTGAGGAGTAAATGGTaGCCATTTATGATGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNVRSKW*PFMMAN Trigger: ATTTGCCATCATAAATGGCCACCATTTACTCCTCAC...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| 3UTR CAA 72 bp | GCTGCAGTTCAGAAAACTAGGGTGTTATTCATATCTTaGATGAACTGTAGTATCTTCCCTGCCCAATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AAVQKTRVLFIS*MNCSIFPAQLD Trigger: ATCTAATTGGGCAGGGAAGATACTACAGTTCATCAAAGATATGAATAACACCCTAGTTTTCTGAACTGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS CCA 90 bp | CGACTTGCTCTCTTAAGGGCGGAGCCCAGTTTTTCACCAAATAAATaGAGGTCCTCAGGCAGCTTCCTGCTCTACCACCTCTCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLALLRAEPSFSPNK*RSSGSFLLYHLSAG Trigger: GCCAGCTGAGAGGTGGTAGAGCAGGAAGCTGCCTGAGGACCTCCATTTATTTGGTGAAAAACTGGGCTCCGCCCTTAAGAGAGCAAGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356415.5 |
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| CDS GCA 90 bp | AGCCCAGTTTTTCACCAAATAAATGGAGGTCCTCAGGCAGCTTCCTaGTCTACCACCTCTCAGCTGGCACAGTCCTTCACCCACGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPVFHQINGGPQAAS*STTSQLAQSFTHVE Trigger: TTCCACGTGGGTGAAGGACTGTGCCAGCTGAGAGGTGGTAGAGCAGGAAGCTGCCTGAGGACCTCCATTTATTTGGTGAAAAACTGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356415.5 |
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| CDS-3UTR CAA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACGCGGAGACTGAGCCATaGCACTCTAGCCTGGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNAETEP*HSSLGD Trigger: GTCGCCCAGGCTAGAGTGCAATGGCTCAGTCTCCGC...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CAA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGCTGAGGCACAACTGTTaGAACCCGGGAGGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AWKISARHEHFFIPSCKELRHNC*NPGGRG Trigger: ACCTCTGCCTCCCGGGTTCAAACAGTTGTGCCTCAG...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CAA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATAATGTATGTCACACCTaGGGCCCAGAACCACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNNVCHT*GPEPQE Trigger: CTCCTGTGGTTCTGGGCCCAAGGTGTGACATACATT...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CAA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCAGGTACCCTTCCCTTaGGAACCAAGACTAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNQVPFP*EPRLRS Trigger: ACTCCTTAGTCTTGGTTCCAAAGGGAAGGGTACCTG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS CCA 90 bp | GCAGCAGATGGTTCAGTGATGAGGGCAAGTTCGAACTATAATATTTaGTTAGAAATGCTGAAAGGCCCCAGCCTAGGTTCTTCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: AADGSVMRASSNYNI*LEMLKGPSLGSSSS Trigger: AGATGAGGAAGAACCTAGGCTGGGGCCTTTCAGCATTTCTAACCAAATATTATAGTTCGAACTTGCCCTCATCACTGAACCATCTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494982.1 |
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| CDS-3UTR CAA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGAAGTTCGCTATAGTTTaGGCCCCTCAATCCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: AWKISARHEHFFIPSCKEKFAIV*APQSQT Trigger: TGTCTGGGATTGAGGGGCCAAAACTATAGCGAACTT...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATCCAATCTCTTGCTTCTaGAGAGAAGCAATTAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNPISCF*REAISG Trigger: CCCACTAATTGCTTCTCTCAAGAAGCAAGAGATTGG...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369709.3 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGGGAACAGCCAATCTCTaGCTTCTTGAGAGAAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AWKISARHEHFFIPSCKEGTANL*LLERSN Trigger: ATTGCTTCTCTCAAGAAGCAAGAGATTGGCTGTTCC...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATAGAAAGGCGTTTTTCTaGACAGTTCCACCTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNRKAFF*TVPPLT Trigger: GGTTAAAGGTGGAACTGTCAAGAAAAACGCCTTTCT...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000369709.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGCTCTTTCCAGACCCTGGACAAGAATCCAAACCACTCTGCCCTTTTAAGCTTAGATTGTAAACTCTaGAGAGAATGTCTCTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: MSSFQTLDKNPNHSALLSLDCKL*RECLYA Trigger: GGCATAGAGACATTCTCTCAAGAGTTTACAATCTAA...GCTTAAAAGGGCAGAGTGGTTTGGATTCTTGTCCAGGGTCTGGAAAGAGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGTTCTGCTGTGATTGCTaGCAAAGGAAAATACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWKISARHEHFFIPSCKEFCCDC*QRKIPR Trigger: CCTTGGTATTTTCCTTTGCAAGCAATCACAGCAGAA...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
||
| CDS-3UTR CAA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACTGCCAACCAAAATCATaGGAACATCTTCCGTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNCQPKS*EHLPCP Trigger: AGGACACGGAAGATGTTCCAATGATTTTGGTTGGCA...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CAA 90 bp | AGCTCCCCCTGGTGGAGGGTAAGATTACAGCTGGATTGTGTATTTACTGTTAATTGCAAAAGGATTCCCTaGATGAAATTACAAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSPWWRVRLQLDCVFTVNCKRIP*MKLQAV Trigger: CACAGCTTGTAATTTCATCAAGGGAATCCTTTTGCA...ATTAACAGTAAATACACAATCCAGCTGTAATCTTACCCTCCACCAGGGGGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CAA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACTCACATAACACTTCATaGGTGGACTCACACCCAACA | + |
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Preference number: 5 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNSHNTS*VDSHPT Trigger: TGTTGGGTGTGAGTCCACCAATGAAGTGTTATGTGA...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CAA 90 bp | GCCTGGAAAATCTCAGCAAGGCATGAACACTTCTTCATACCTAGTTGCAAAGAGAGTTTAAAGGTATGTTaGAGGGGTGTTTTAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: AWKISARHEHFFIPSCKESLKVC*RGVLKQ Trigger: CTGCTTTAAAACACCCCTCAAACATACCTTTAAACT...CTCTTTGCAACTAGGTATGAAGAAGTGTTCATGCCTTGCTGAGATTTTCCAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS-3UTR CAA 90 bp | TCTAAAAGTAGACTGTTCAGGGATACCACCAAGCCATTAGAGCAAACTATGAACAGAAAGTTTTACTGGTaGATGAGATGTCTGTCTATG | + |
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Preference number: 5 (lower is better) Translates to: SKSRLFRDTTKPLEQTMNRKFYW*MRCLSM Trigger: CATAGACAGACATCTCATCAACCAGTAAAACTTTCT...GTTCATAGTTTGCTCTAATGGCTTGGTGGTATCCCTGAACAGTCTACTTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369709.3 |
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| CDS GCA 72 bp | CATTTCTCTCCTCCAACTCCTACACGGCCCTCGACTTaGTCTCTTAAGGGCGGAGCCCAGTTTTTCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: HFSPPTPTRPST*SLKGGAQFFTK Trigger: TTTGGTGAAAAACTGGGCTCCGCCCTTAAGAGAGCAAGTCGAGGGCCGTGTAGGAGTTGGAGGAGAGAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356415.5 |
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| CDS CCA 72 bp | GGTTCAGTGATGAGGGCAAGTTCGAACTATAATATTTaGTTAGAAATGCTGAAAGGCCCCAGCCTAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSVMRASSNYNI*LEMLKGPSLGS Trigger: AGAACCTAGGCTGGGGCCTTTCAGCATTTCTAACCAAATATTATAGTTCGAACTTGCCCTCATCACTGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494982.1 |
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