RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RANGAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100401

Ensembl transcript IDs: ENST00000356244.8, ENST00000405486.5, ENST00000418067.1, ENST00000422838.1, ENST00000446258.5, ENST00000452543.5, ENST00000455915.6

Found 567 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGTTCTGGCTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTaGGGACGGCCATCAGGGCCCAGGCGGAGATCAGCAGAGCGCCCT +
Preference number: 1 (lower is better)
Translates to: LGSGSAREPGRKAGG*GRPSGPRRRSAERP
Trigger: AGGGCGCTCTGCTGATCTCCGCCTGGGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAGCCAGAACCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR CCA 90 bp CTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTaGGTGGGGACGGCCATCAGGGCCCAGGCGGAGATCAGCAGAGCG +
Preference number: 1 (lower is better)
Translates to: LPGFWLRQGAGPEGR*VGTAIRAQAEISRA
Trigger: CGCTCTGCTGATCTCCGCCTGGGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR GCA 90 bp GCCGAGGCCGGGCCCTTCTGCAGGGCTGACTGCCCCACAGACTGCTaGGGGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAACGG +
Preference number: 1 (lower is better)
Translates to: AEAGPFCRADCPTDC*GAACSAEVGLHVQR
Trigger: CCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCAGCAGTCTGTGGGGCAGTCAGCCCTGCAGAAGGGCCCGGCCTCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 90 bp GAGGCCGAGGCCGGGCCCTTCTGCAGGGCTGACTGCCCCACAGACTaGTGCGGGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAA +
Preference number: 1 (lower is better)
Translates to: EAEAGPFCRADCPTD*CGAACSAEVGLHVQ
Trigger: TTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCAGCAGTCTGTGGGGCAGTCAGCCCTGCAGAAGGGCCCGGCCTCGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 90 bp ACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACG +
Preference number: 1 (lower is better)
Translates to: TTQRGRTARGQLPGF*LRQGAGPEGRWVGT
Trigger: CGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR CCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTaGGTTCTGGCTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGT +
Preference number: 1 (lower is better)
Translates to: PNHNTEGKDSTRATP*VLAPPGSRAGRQVG
Trigger: ACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR CCA 90 bp AGCCCAAAGGCAGGGTGCTGGGTGAGGTGTGGCCAGGCAGGAAAATaGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: SPKAGCWVRCGQAGK*APTQDCHFPGSGLR
Trigger: CCTCAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTGGCCACACCTCACCCAGCACCCTGCCTTTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 90 bp GGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGCTCCCCTaGCCCAGGAGGTCCTTTAAGAGCAGCGTCCAGATGCAGCTCGGA +
Preference number: 1 (lower is better)
Translates to: GRSYSICPVQTLPLP*PRRSFKSSVQMQLG
Trigger: TCCGAGCTGCATCTGGACGCTGCTCTTAAAGGACCTCCTGGGGCAGGGGAGCGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR GCA 90 bp AGACACACACAGAGCACAAAGGGGAAAGCATGGGGCAGTCACGGGTaGTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCG +
Preference number: 1 (lower is better)
Translates to: RHTQSTKGKAWGSHG*SGRSYSICPVQTLP
Trigger: CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCCCATGCTTTCCCCTTTGTGCTCTGTGTGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR GCA 90 bp TCCTTTAAGAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTaGCTCTCCCTCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACA +
Preference number: 1 (lower is better)
Translates to: SFKSSVQMQLGHWGP*LSLPRLENSFGLST
Trigger: TGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTCTTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR CCA 90 bp CAGGGGACAGGGCCAGCAGTATCCTCTGCCACCTGGTCACCTACGTaGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAACCTTGG +
Preference number: 1 (lower is better)
Translates to: QGTGPAVSSATWSPT*PTANEKILPSKKPW
Trigger: CCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATACTGCTGGCCCTGTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 90 bp TCACACAGAAGACAGGGGACAGGGCCAGCAGTATCCTCTGCCACCTaGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCT +
Preference number: 1 (lower is better)
Translates to: SHRRQGTGPAVSSAT*SPTWPTANEKILPS
Trigger: AGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATACTGCTGGCCCTGTCCCCTGTCTTCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 90 bp GCTCCCAAAGCACATACATGGTGTAGGGTAGGAGGTAAGGAAGGTTaGCTGGGCTGTCCTCACATATGTGGCAGTGGAGCAAAGGATCCC +
Preference number: 1 (lower is better)
Translates to: APKAHTWCRVGGKEG*LGCPHICGSGAKDP
Trigger: GGGATCCTTTGCTCCACTGCCACATATGTGAGGACAGCCCAGCCAACCTTCCTTACCTCCTACCCTACACCATGTATGTGCTTTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 90 bp ACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAACCTTaGAGGGACTTCTTGGAGGCCGTTTGTGGGGGACATGGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: TWPTANEKILPSKKP*RDFLEAVCGGHGLP
Trigger: TGGGAGCCCATGTCCCCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 90 bp CTGCCACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTaGCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTTGTG +
Preference number: 1 (lower is better)
Translates to: LPPGHLRGRLPMRKY*PLRNLGGTSWRPFV
Trigger: CACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 90 bp CACTCTCCATTTCCAGAACATCTTCATCATCCCAGAGAATCTGTTTaGAGCCTCACTCCCTATTCCACCCTTCCCCTAGCCCTGGCAACC +
Preference number: 1 (lower is better)
Translates to: HSPFPEHLHHPRESV*SLTPYSTLPLALAT
Trigger: GGTTGCCAGGGCTAGGGGAAGGGTGGAATAGGGAGTGAGGCTGCAAACAGATTCTCTGGGATGATGAAGATGTTCTGGAAATGGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 90 bp CCAATGAGAAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTaGAGGCCGTTTGTGGGGGACATGGGCTCCCAAAGCACATACATG +
Preference number: 1 (lower is better)
Translates to: PMRKYCPLRNLGGTS*RPFVGDMGSQSTYM
Trigger: CATGTATGTGCTTTGGGAGCCCATGTCCCCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGGGCCGGAAGGCAGGTaGGTGGGGACGGCCATCAGG +
Preference number: 2 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGGPEGR*VGTAIR
Trigger: CCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCC...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp TCTCAGCAGCCAGGAGAAGGCCCACTAGGTCCGGGGCCAGCGCAGTCCCAGCAGTGTGGGGCCCAGGGTTaGCCTCTGCCAACAACCCCA +
Preference number: 2 (lower is better)
Translates to: SQQPGEGPLGPGPAQSQQCGAQG*PLPTTP
Trigger: TGGGGTTGTTGGCAGAGGGCAACCCTGGGCCCCACA...CTGCTGGGACTGCGCTGGCCCCGGACCTAGTGGGCCTTCTCCTGGCTGCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGGACCCGCCCTGCCTGTaGCCAGAGTCCTGTCCAAGG +
Preference number: 2 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQDPPCL*PESCPR
Trigger: CCTTGGACAGGACTCTGGCCACAGGCAGGGCGGGTC...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGGGGCCGGAAGGCAGGTaGGTGGGGACGGCCATCAGG +
Preference number: 2 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWGPEGR*VGTAIR
Trigger: CCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCC...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp TGCGGGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAACGGCCCCCGAGAATGCAGCTCGGACATTaGGGACCCTGCCTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: CGAACSAEVGLHVQRPPRMQLGH*GPCLSL
Trigger: GAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCAT...TCTCGGGGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR TCA 90 bp TGCGGGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAACGGCCCCCGAGAACACGACTTTATTTGTaGAGCCCCCGGGCACAGCCC +
Preference number: 2 (lower is better)
Translates to: CGAACSAEVGLHVQRPPRTRLYL*SPRAQP
Trigger: GGGCTGTGCCCGGGGGCTTCACAAATAAAGTCGTGT...TCTCGGGGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCGGGCCGGAAGGCAGGTaGGTGGGGACGGCCATCAGG +
Preference number: 2 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGGPEGR*VGTAIR
Trigger: CCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCC...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGG +
Preference number: 2 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWQLPGF*LRQGAG
Trigger: CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTG...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGGCAATGGCGTAGGCTaGGCCTCAGTTCATCCGAGT +
Preference number: 2 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTGNGVG*ASVHPS
Trigger: ACTCGGATGAACTGAGGCGCAGCCTACGCCATTGCC...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCTCCTGTCCAAGGCAATaGCGTAGGCTGCGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTSCPRQ*RRLRLS
Trigger: ACTGAGGCGCAGCCTACGCCATTGCCTTGGACAGGA...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCGACCCGCCCTGCCTGTaGCCAGAGTCCTGTCCAAGG +
Preference number: 2 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPDPPCL*PESCPR
Trigger: CCTTGGACAGGACTCTGGCCACAGGCAGGGCGGGTC...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGG +
Preference number: 2 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLQLPGF*LRQGAG
Trigger: CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTG...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCGACACAGACCCGCCCTaGCTGTGGCCAGAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPDTDPP*LWPESC
Trigger: ACAGGACTCTGGCCACAGGCAGGGCGGGTCTGTGTC...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGACCCGCCCTGCCTGTaGCCAGAGTCCTGTCCAAGG +
Preference number: 2 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLDPPCL*PESCPR
Trigger: CCTTGGACAGGACTCTGGCCACAGGCAGGGCGGGTC...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp CCACGTTGTAGCTGGCATCAGAACTTAATGCCAGCCCCACACCCACCCCCTACCCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGG +
Preference number: 2 (lower is better)
Translates to: PRCSWHQNLMPAPHPPPTQLPGF*LRQGAG
Trigger: CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTG...GGTAGGGGGTGGGTGTGGGGCTGGCATTAAGTTCTGATGCCAGCTACAACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR GCA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGCAGGAGGCACAGACCTaGACATGCGCCACACCCACA +
Preference number: 2 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWQEAQT*TCATPT
Trigger: TGTGGGTGTGGCGCATGTGCAGGTCTGTGCCTCCTG...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGTGTGGGGCCCAGGGTTaGCCTCTGCCAACAACCCCA +
Preference number: 2 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPCGAQG*PLPTTP
Trigger: TGGGGTTGTTGGCAGAGGGCAACCCTGGGCCCCACA...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGACGCGGGCAACTCCCTaGGTTCTGGCTCCGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PMAFSALQAERSAQWYGWTRATP*VLAPPG
Trigger: CCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGT...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR TCA 90 bp GGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAACGGCCCCCGAGACTATACATACTCAGGGGACTaGCAGGACACATGGGACACA +
Preference number: 2 (lower is better)
Translates to: GPHALPRWDSTYNGPRDYTYSGD*QDTWDT
Trigger: TGTGTCCCATGTGTCCTGTCAGTCCCCTGAGTATGT...ATAGTCTCGGGGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR GCA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTAGAGCAGCGTCCAGATaGAGCTCGGACATTGGGGAC +
Preference number: 2 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPRAASR*SSDIGD
Trigger: GTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTCT...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTaGCGCAGGACCAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDGRGDS*RRTRAW
Trigger: CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACC...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCGGACAATCTGGTGTCTaGCTGTCCACACGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SPDWRTALGCQHSPSSQAGQSGV*LSTRCG
Trigger: CCCACACCGTGTGGACAGGCAGACACCAGATTGTCC...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp GCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGAGGAGTCCCAGCAGCTCCTaGTCCTGGACAATCTGGTGT +
Preference number: 2 (lower is better)
Translates to: AGKWAPTQDCHFPGSGLRSPSSS*SWTIWC
Trigger: ACACCAGATTGTCCAGGAGCAGGAGCTGCTGGGACT...CCTCAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp CAGAACTTAATGCCAGCCCCACACCCACCCCCTACCGTATCAACTCACACAGAACCTGTCCACACGGTGTaGGGCCCAGGGTTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: QNLMPAPHPPPTVSTHTEPVHTV*GPGLPS
Trigger: AGAGGGCAACCCTGGGCCCCACACCGTGTGGACAGG...TTCTGTGTGAGTTGATACGGTAGGGGGTGGGTGTGGGGCTGGCATTAAGTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR GCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGGCAATGGCGTAGGCTaGGCCTCAGTTCATCCGAGT +
Preference number: 2 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTGNGVG*ASVHPS
Trigger: ACTCGGATGAACTGAGGCGCAGCCTACGCCATTGCC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCGTCAGCACAGTGGTATaGATGGTAGGGGTGACAGCT +
Preference number: 2 (lower is better)
Translates to: SPDWRTALGCQHSPSSQAVSTVV*MVGVTA
Trigger: AGCTGTCACCCCTACCATCCATACCACTGTGCTGAC...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CCA 90 bp CAGAACTTAATGCCAGCCCCACACCCACCCCCTACCGTATCAACTCACACAGAAGGCCAGGCAGGAAAATaGGCCCCCACTCAGGACTGC +
Preference number: 2 (lower is better)
Translates to: QNLMPAPHPPPTVSTHTEGQAGK*APTQDC
Trigger: GCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTGGCC...TTCTGTGTGAGTTGATACGGTAGGGGGTGGGTGTGGGGCTGGCATTAAGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR TCA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTACATACTCAGGGGACTaGCAGGACACATGGGACACA +
Preference number: 2 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGTYSGD*QDTWDT
Trigger: TGTGTCCCATGTGTCCTGTCAGTCCCCTGAGTATGT...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR TCA 90 bp ACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAAAGGACCAGGGCTTGGTaGCGAGAAGCAGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: TWSPTWPTANEKILPSKKRTRAW*REAAPG
Trigger: GCCTGGGGCTGCTTCTCGTCACCAAGCCCTGGTCCT...TTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR GCA 90 bp ACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAAGGTAGGGGTGACAGCTaGCGCAGGACCAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: TWSPTWPTANEKILPSKKGRGDS*RRTRAW
Trigger: CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACC...TTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp ATATGTGGCAGTGGAGCAAAGGATCCCAAGGGAGGTGGCTTCCATAGTGAAGGACATGCTCTGCCGAGGTaGGACTCCACGTACAACGGC +
Preference number: 2 (lower is better)
Translates to: ICGSGAKDPKGGGFHSEGHALPR*DSTYNG
Trigger: GCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATG...TCCTTCACTATGGAAGCCACCTCCCTTGGGATCCTTTGCTCCACTGCCACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR TCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGACATACTCAGGGGACTaGCAGGACACATGGGACACA +
Preference number: 2 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRTYSGD*QDTWDT
Trigger: TGTGTCCCATGTGTCCTGTCAGTCCCCTGAGTATGT...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR GCA 90 bp AAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTTGTGGGCAGGAGGCACAGACCTaGACATGCGCCACACCCACA +
Preference number: 2 (lower is better)
Translates to: KILPSKKPWRDFLEAVCGQEAQT*TCATPT
Trigger: TGTGGGTGTGGCGCATGTGCAGGTCTGTGCCTCCTG...CCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR GCA 90 bp CCAGAACATCTTCATCATCCCAGAGAATCTGTTTGCAGCCTCACTCCCTATTCCACCCTACCGCTCCCCTaGCCCAGGAGGTCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: PEHLHHPRESVCSLTPYSTLPLP*PRRSFK
Trigger: CTTAAAGGACCTCCTGGGGCAGGGGAGCGGTAGGGT...GGAATAGGGAGTGAGGCTGCAAACAGATTCTCTGGGATGATGAAGATGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR GCA 90 bp AAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTTGTGGGTGGGGCAGTCACGGGTaGTCAGGGAGGTCATACAGC +
Preference number: 2 (lower is better)
Translates to: KILPSKKPWRDFLEAVCGWGSHG*SGRSYS
Trigger: GCTGTATGACCTCCCTGAGCACCCGTGACTGCCCCA...CCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp CAGAACTTAATGCCAGCCCCACACCCACCCCCTACCGTATCAACTCACACAGAATCTCCCTCCCCAGACTaGAGAACAGCTTTGGGTTGT +
Preference number: 2 (lower is better)
Translates to: QNLMPAPHPPPTVSTHTESPSPD*RTALGC
Trigger: ACAACCCAAAGCTGTTCTCCAGTCTGGGGAGGGAGA...TTCTGTGTGAGTTGATACGGTAGGGGGTGGGTGTGGGGCTGGCATTAAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp GTTTTCAAAGTTCATCCACGTTGTAGCTGGCATCAGAACTTAATGCCAGCCCCATCCTGTCCAAGGCAATaGCGTAGGCTGCGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: VFKVHPRCSWHQNLMPAPSCPRQ*RRLRLS
Trigger: ACTGAGGCGCAGCCTACGCCATTGCCTTGGACAGGA...TGGGGCTGGCATTAAGTTCTGATGCCAGCTACAACGTGGATGAACTTTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CAA 90 bp GCCAATGAGAAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTaGGAGGCCGTTTGTGGGGGACATGGGCTCCCAAAGCACATACAT +
Preference number: 2 (lower is better)
Translates to: ANEKILPSKKPWRDF*EAVCGGHGLPKHIH
Trigger: ATGTATGTGCTTTGGGAGCCCATGTCCCCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp TCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAACCTTGGACTGGAGAACAGCTTTaGGTTGTCAACACTCCCCCT +
Preference number: 2 (lower is better)
Translates to: SPTWPTANEKILPSKKPWTGEQL*VVNTPP
Trigger: AGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGT...CCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp ACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAACTGTCCTCACATATGTaGCAGTGGAGCAAAGGATCC +
Preference number: 2 (lower is better)
Translates to: TWSPTWPTANEKILPSKKLSSHM*QWSKGS
Trigger: GGATCCTTTGCTCCACTGCCACATATGTGAGGACAG...TTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR TCA 90 bp CCAGAACATCTTCATCATCCCAGAGAATCTGTTTGCAGCCTCACTCCCTATTCCGAGTTTCTGAGTCTCTaGAGCTGCCACACGACTTTA +
Preference number: 2 (lower is better)
Translates to: PEHLHHPRESVCSLTPYSEFLSL*SCHTTL
Trigger: TAAAGTCGTGTGGCAGCTTCAGAGACTCAGAAACTC...GGAATAGGGAGTGAGGCTGCAAACAGATTCTCTGGGATGATGAAGATGTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp CTTATTCTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCGTATCCTCTGCCACCTaGTCACCTACGTGGCCGACT +
Preference number: 2 (lower is better)
Translates to: LILDASSKWNHICPFVSGVSSAT*SPTWPT
Trigger: AGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATAC...GCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAGAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CCA 90 bp CTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCTTATTTCCCTCTAAGAAACCTTaGAGGGACTTCTTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LDASSKWNHICPFVSGLFPSKKP*RDFLEA
Trigger: GGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGG...AAATAAGCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 72 bp GCCGGGCCCTTCTGCAGGGCTGACTGCCCCACAGACTaGTGCGGGGCCGCATGCTCTGCCGAGGTGGGACTC +
Preference number: 3 (lower is better)
Translates to: AGPFCRADCPTD*CGAACSAEVGL
Trigger: GAGTCCCACCTCGGCAGAGCATGCGGCCCCGCAGCAGTCTGTGGGGCAGTCAGCCCTGCAGAAGGGCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 72 bp AGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: RGRTARGQLPGF*LRQGAGPEGRW
Trigger: CCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR GCA 72 bp AGGGCTGACTGCCCCACAGACTGCTGCGGGGCCGCATaGTCTGCCGAGGTGGGACTCCACGTACAACGGCCC +
Preference number: 3 (lower is better)
Translates to: RADCPTDCCGAA*SAEVGLHVQRP
Trigger: GGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCAGCAGTCTGTGGGGCAGTCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 72 bp AACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTaGGTTCTGGCTCCGCCAGGGAGCCGGGCCGGAAGG +
Preference number: 3 (lower is better)
Translates to: NTEGKDSTRATP*VLAPPGSRAGR
Trigger: CCTTCCGGCCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR CCA 72 bp CCACAGACTGCTGCGGGGCCGCATGCTCTGCCGAGGTaGGACTCCACGTACAACGGCCCCCGAGACTATCCC +
Preference number: 3 (lower is better)
Translates to: PQTAAGPHALPR*DSTYNGPRDYP
Trigger: GGGATAGTCTCGGGGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCAGCAGTCTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 72 bp CCTGCCCCAGGAGGTCCTTTAAGAGCAGCGTCCAGATaGAGCTCGGACATTGGGGACCCTGCCTCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: PAPGGPLRAASR*SSDIGDPASPS
Trigger: GGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTCTTAAAGGACCTCCTGGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR GCA 72 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTaGCTCTCCCTCCCCAGACTGGAGAACAGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: SSVQMQLGHWGP*LSLPRLENSFG
Trigger: CCCAAAGCTGTTCTCCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR-3UTR CAA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGAGAGAACAGCTTTGGGTaGTCAACACTCCCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRENSFG*STLPLQ
Trigger: CTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTC...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR GCA 72 bp TACAGCATCTGCCCAGTCCAGACCCTACCGCTCCCCTaGCCCAGGAGGTCCTTTAAGAGCAGCGTCCAGATG +
Preference number: 3 (lower is better)
Translates to: YSICPVQTLPLP*PRRSFKSSVQM
Trigger: CATCTGGACGCTGCTCTTAAAGGACCTCCTGGGGCAGGGGAGCGGTAGGGTCTGGACTGGGCAGATGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR CCA 72 bp AGACAGGGGACAGGGCCAGCAGTATCCTCTGCCACCTaGTCACCTACGTGGCCGACTGCCAATGAGAAAATA +
Preference number: 3 (lower is better)
Translates to: RQGTGPAVSSAT*SPTWPTANEKI
Trigger: TATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATACTGCTGGCCCTGTCCCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 72 bp ACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTaGACATGCGCCACACCCACACACATACTCAGGGGA +
Preference number: 3 (lower is better)
Translates to: TLKPKSRQEAQT*TCATPTHILRG
Trigger: TCCCCTGAGTATGTGTGTGGGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
3UTR CCA 72 bp TTGGAGGGACTTCTTGGAGGCCGTTTGTGGGGGACATaGGCTCCCAAAGCACATACATGGTGTAGGGTAGGA +
Preference number: 3 (lower is better)
Translates to: LEGLLGGRLWGT*APKAHTWCRVG
Trigger: TCCTACCCTACACCATGTATGTGCTTTGGGAGCCCATGTCCCCCACAAACGGCCTCCAAGAAGTCCCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR-3UTR CAA 90 bp GAGACTATCCCGCTTTCAGTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACGACTGGAGAACAGCTTaGGGTTGTCAACACTCCCCC +
Preference number: 3 (lower is better)
Translates to: ETIPLSVRVSESLKLPHDDWRTA*GCQHSP
Trigger: GGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTC...GTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAAAGCGGGATAGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 72 bp AAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTaGAGGCCGTTTGTGGGGGACATGGGCTCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: KYCPLRNLGGTS*RPFVGDMGSQS
Trigger: GCTTTGGGAGCCCATGTCCCCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 72 bp GGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTaGCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGG +
Preference number: 3 (lower is better)
Translates to: GHLRGRLPMRKY*PLRNLGGTSWR
Trigger: CCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR GCA 72 bp TTTCCAGAACATCTTCATCATCCCAGAGAATCTGTTTaGAGCCTCACTCCCTATTCCACCCTTCCCCTAGCC +
Preference number: 3 (lower is better)
Translates to: FPEHLHHPRESV*SLTPYSTLPLA
Trigger: GGCTAGGGGAAGGGTGGAATAGGGAGTGAGGCTGCAAACAGATTCTCTGGGATGATGAAGATGTTCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CCA 72 bp ACTGCCAATGAGAAAATATTGCCCTCTAAGAAACCTTaGAGGGACTTCTTGGAGGCCGTTTGTGGGGGACAT +
Preference number: 3 (lower is better)
Translates to: TANEKILPSKKP*RDFLEAVCGGH
Trigger: ATGTCCCCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCCGGGCGTGGGCCTGCTaGGAGGTGGCTCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRARAWAC*EVALRE
Trigger: CTCCCGCAGAGCCACCTCCCAGCAGGCCCACGCCCG...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR CCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCTCAAGGTCTCGGCCATaGCCACGGCGCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRASRSRP*PRRPSQ
Trigger: CTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGA...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCAGCAGGCTGAGCTCTTaGGCAGGGCCTCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRASRLSS*AGPRSL
Trigger: AAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCT...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCGCACCTTGGCCATGTTaGAGCCCTCCAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRAAPWPC*SPPAPP
Trigger: AGGAGGTGCTGGAGGGCTTCAACATGGCCAAGGTGC...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCCCACGCCCACTGTGTTaGCTTCCAGACGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRAPRPLC*LPDAEP
Trigger: AGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGG...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGQLPGF*LRQGAG
Trigger: CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTG...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCAGGGCCGGAAGGCAGGTaGGTGGGGACGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPGPEGR*VGTAIR
Trigger: CCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCC...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCCTTGGAGGCCGTTTGTaGGGGACATGGGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRALGGRL*GTWAPK
Trigger: TTTGGGAGCCCATGTCCCCCACAAACGGCCTCCAAG...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCGAGCTGCCCATTTCCTaGGCCCCTTCAGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRAELPIS*APSVNG
Trigger: GCCATTCACTGAAGGGGCCCAGGAAATGGGCAGCTC...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGACCCGCAGCAGGGGGTTaGCAGCGAAAGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGPAAGG*QRKPGP
Trigger: TGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGG...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCACGCGGGCAACTCCCTaGGTTCTGGCTCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTTRATP*VLAPPG
Trigger: CCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGT...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAACGCGGGCAACTCCCTaGGTTCTGGCTCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGTRATP*VLAPPG
Trigger: CCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGT...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGGCATGACTCTGGGGTaGGGCACAGGGGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTGMTLG*GTGVSP
Trigger: GGGGCTGACCCCTGTGCCCCACCCCAGAGTCATGCC...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGCCCGCAGCAGGGGGTTaGCAGCGAAAGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQPAAGG*QRKPGP
Trigger: TGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGG...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGGAAGGTGGAGACGTCTaGAGGAGGTGGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGEGGDV*RRWGGQ
Trigger: CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTC...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGCTGGGAGGTGGCTCTaGGGGAGCGACGCGCGAATA +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTAGRWL*GSDARI
Trigger: TATTCGCGCGTCGCTCCCGCAGAGCCACCTCCCAGC...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR CCA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGCCATTCTGTGGCATGTaGACCTCCTCCAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGPFCGM*TSSRVP
Trigger: CGGGACCCTGGAGGAGGTCCACATGCCACAGAATGG...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp TGCGGGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAACGGCCCCCGAGATCAGCACGGAGCTCTTaGGCCCTAGGCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CGAACSAEVGLHVQRPPRSARSS*ALGAAA
Trigger: AGCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGA...TCTCGGGGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCCTGTCCACACGGTGTaGGGCCCAGGGTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHPVHTV*GPGLPS
Trigger: AGAGGGCAACCCTGGGCCCCACACCGTGTGGACAGG...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGCCCTCCAGCACCTCCTaGAGCTGTTCACAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGPSSTS*SCSQPS
Trigger: AGAAGGCTGTGAACAGCTTCAGGAGGTGCTGGAGGG...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGCTCTGCTCTTCAGGCTaGGCGGTCAGCACAGTGGTA +
Preference number: 4 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGLCSSG*AVSTVV
Trigger: TACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAG...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGGGTAGGGGTGACAGCTaGCGCAGGACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQGRGDS*RRTRAW
Trigger: CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACC...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCCAGGGTTGCCCTCTaGCAACAACCCCACGATCCG +
Preference number: 4 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPPRVAL*QQPHDP
Trigger: CGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGG...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGATGTGGGGCCCAGGGTTaGCCTCTGCCAACAACCCCA +
Preference number: 4 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGCGAQG*PLPTTP
Trigger: TGGGGTTGTTGGCAGAGGGCAACCCTGGGCCCCACA...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGCAGGCCGCCGCGGATaGCATCTGCAATGGCAACTG +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTAGRRG*HLQWQL
Trigger: CAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGC...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACGGACAGCACGGGAGCTaGCTCCCCAGTGTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHGQHGS*LPSVRV
Trigger: GACCCTAACACTGGGGAGCCAGCTCCCGTGCTGTCC...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGGACCCGCCCTGCCTGTaGCCAGAGTCCTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWDPPCL*PESCPR
Trigger: CCTTGGACAGGACTCTGGCCACAGGCAGGGCGGGTC...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCACTGGAGAACAGCTTTaGGTTGTCAACACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRATGEQL*VVNTPP
Trigger: AGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGT...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGCCCCACTGCACGTCTaGTTTCAACCGTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTAPLHV*FQPWPG
Trigger: TCCCGGCCACGGTTGAAACCAGACGTGCAGTGGGGC...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCACAGTGGCGCCATCTaGGCTCACTGCAAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHHSGAI*AHCKLR
Trigger: GCGGAGCTTGCAGTGAGCCCAGATGGCGCCACTGTG...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTCCGTGGCCGGGAGACTaGGCAGGCCACAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPPWPGD*AGHNGP
Trigger: GGGGCCATTGTGGCCTGCCCAGTCTCCCGGCCACGG...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGCCGTCGAAGGCTAAGTaGAGAAGGCCGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWPSKAK*RRPRGQ
Trigger: CTGCCCCCTCGGCCTTCTTCACTTAGCCTTCGACGG...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR GCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGGCGATGACCCTGGCTaGTTCCACGCCCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTGDDPG*FHAHCV
Trigger: AACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCC...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGAGGGCCTCGAAGCCTTaGACACCGTCGGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWRASKP*TPSGPN
Trigger: ATTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCT...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGCCCAGGGTTGCCCTCTaGCAACAACCCCACGATCCG +
Preference number: 4 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWPRVAL*QQPHDP
Trigger: CGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGG...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGCGGGGCCGCATGCTCTaGCGAGGTGGGACTCCACGT +
Preference number: 4 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGRGRML*RGGTPR
Trigger: ACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCG...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGATCTTCCGTGAGGGCGTaGCTGACTTCTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGSSVRA*LTSLPA
Trigger: GGCAGGGAGAGAAGTCAGCCACGCCCTCACGGAAGA...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp ATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGTGACGAGAAGCAGCCCGACGTCTGCAGGAGGTaGGGAGGACAGCACGGGAGC +
Preference number: 4 (lower is better)
Translates to: MVGVTAAAGPGLGDEKQPDVCRR*GGQHGS
Trigger: GCTCCCGTGCTGTCCTCCCCACCTCCTGCAGACGTC...GGGCTGCTTCTCGTCACCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGGGGCGCTGTTGGGCTTaGTCACGAACGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQGRCWA*SRTPAA
Trigger: TGCTGCTGGCGTTCGTGACCAAGCCCAACAGCGCCC...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGACCCGCCCTGCCTGTaGCCAGAGTCCTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKDPPCL*PESCPR
Trigger: CCTTGGACAGGACTCTGGCCACAGGCAGGGCGGGTC...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTTCCGAGGCCATGTTaGCTAGGCTGGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRLPRPC*LGWWAP
Trigger: GGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAG...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCACATTCGGTCAGAGCTaGAGCCAGGATCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTTFGQS*SQDLAA
Trigger: GGCGGCAAGATCCTGGCTGCAGCTCTGACCGAATGT...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGGAAGGTGGAGACGTCTaGAGGAGGTGGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQEGGDV*RRWGGQ
Trigger: CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTC...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGGCAATGGCGTAGGCTaGGCCTCAGTTCATCCGAGT +
Preference number: 4 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGGNGVG*ASVHPS
Trigger: ACTCGGATGAACTGAGGCGCAGCCTACGCCATTGCC...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGGGTAGGGGTGACAGCTaGCGCAGGACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGGRGDS*RRTRAW
Trigger: CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACC...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TCTCAGCAGCCAGGAGAAGGCCCACTAGGTCCGGGGCCAGCGCAGTCCCAGCAGGGACAATCTGGTGTCTaGCTGTCCACACGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SQQPGEGPLGPGPAQSQQGQSGV*LSTRCG
Trigger: CCCACACCGTGTGGACAGGCAGACACCAGATTGTCC...CTGCTGGGACTGCGCTGGCCCCGGACCTAGTGGGCCTTCTCCTGGCTGCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGTGGGGCAGTCACGGGTaGTCAGGGAGGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWWGSHG*SGRSYS
Trigger: GCTGTATGACCTCCCTGAGCACCCGTGACTGCCCCA...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGTGGGGCAGTCACGGGTaGTCAGGGAGGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQWGSHG*SGRSYS
Trigger: GCTGTATGACCTCCCTGAGCACCCGTGACTGCCCCA...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCAATTCATCCCAGAGAATaGCCCACCACCCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPIHPRE*PTTHAG
Trigger: GCCAGCGTGGGTGGTGGGGCATTCTCTGGGATGAAT...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGGCCACCTGAGTCTTaGCAAGTGTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHRPPES*QVSLPA
Trigger: AGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCG...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACGGCCACCTGAGTCTTaGCAAGTGTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPRPPES*QVSLPA
Trigger: AGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCG...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGGGACAGCACGGGAGCTaGCTCCCCAGTGTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGGQHGS*LPSVRV
Trigger: GACCCTAACACTGGGGAGCCAGCTCCCGTGCTGTCC...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACGGGCCGGAAGGCAGGTaGGTGGGGACGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHGPEGR*VGTAIR
Trigger: CCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCC...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGQLPGF*LRQGAG
Trigger: CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTG...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGCGCAGGAGCCCCATCTaGAATCCCCGGCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPRRSPI*NPRRTR
Trigger: GCGAGTCCGCCGGGGATTCCAGATGGGGCTCCTGCG...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR CCA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCCCCACCACCCACGCTaGCATGACTCTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AEISRAPSGGGEFNGGAAPHHPR*HDSGVG
Trigger: CCCCACCCCAGAGTCATGCCAGCGTGGGTGGTGGGG...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACCCCGCAGCAGGGGGTTaGCAGCGAAAGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHPAAGG*QRKPGP
Trigger: TGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGG...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCCGGCGCCCTTCTCAGTaGAGGTGTTGTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTRRPSQ*RCCHSG
Trigger: ACCTGAATGACAACACCTTCACTGAGAAGGGCGCCG...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTGCCCTTCTGCAGGGCTaGCTGCCCCACAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: AEISRAPSGGGEFNGGAAALLQG*LPHRLL
Trigger: CAGCAGTCTGTGGGGCAGTCAGCCCTGCAGAAGGGC...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGGCCATCTCAGGAGTCTaGCCCTACCTCCCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQAISGV*PYLPCY
Trigger: ATAGCAGGGGAGGTAGGGTCAGACTCCTGAGATGGC...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGGCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGAGGGCCTCGAAGCCTTaGACACCGTCGGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: QAGKWAPTQDCHFPGSGLRASKP*TPSGPN
Trigger: ATTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCT...CAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGTTGAGCAGACCCATGTaGACGAGCAGCCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQLSRPM*TSSLVR
Trigger: CCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAA...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGGGACATTGGGGACCCTaGCTCTCCCTCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGGHWGP*LSLPRL
Trigger: CAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCC...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCGGACATTGGGGACCCTaGCTCTCCCTCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPGHWGP*LSLPRL
Trigger: CAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCC...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGCGCGCCTCCGCCCTCTaGGGCGGGGACGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: PMAFSALQAERSAQWYGWRASAL*GGDGFR
Trigger: CCTAAATCCGTCCCCGCCCCAGAGGGCGGAGGCGCG...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGAGGTCAAGGTCTCGGCCATaGCCACGGCGCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AGKWAPTQDCHFPGSGLRSRSRP*PRRPSQ
Trigger: CTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGA...CCTCAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCGGATGGCATCTGCAATaGCAACTGCACCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTGWHLQ*QLHPWS
Trigger: GCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCC...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCTCAGCTCCTTTAGCTTaGGCAGGCCGCCGCGGATGG +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPSAPLA*AGRRGW
Trigger: CCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGA...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGACGTCTGCAGGAGGTaGGGAGGACAGCACGGGAGC +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLDVCRR*GGQHGS
Trigger: GCTCCCGTGCTGTCCTCCCCACCTCCTGCAGACGTC...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGTCTGCAGCAGACTGTaGCGGGCGAAGGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKVCSRL*RAKEQD
Trigger: ATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGAC...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGGACCCGCCCTGCCTGTaGCCAGAGTCCTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGDPPCL*PESCPR
Trigger: CCTTGGACAGGACTCTGGCCACAGGCAGGGCGGGTC...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGGGGCCGGAAGGCAGGTaGGTGGGGACGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: PMAFSALQAERSAQWYGWGPEGR*VGTAIR
Trigger: CCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCC...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACCAACTCCCTGGGTTCTaGCTCCGCCAGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHQLPGF*LRQGAG
Trigger: CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTG...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGATGCTCCTGGACAATCTaGTGTCTGCCTGTCCACACG +
Preference number: 4 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGCSWTI*CLPVHT
Trigger: CGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCA...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGAATGCAGCTCGGACATTaGGGACCCTGCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRMQLGH*GPCLSL
Trigger: GAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCAT...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGATGCAGCTCGGACATTaGGGACCCTGCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKMQLGH*GPCLSL
Trigger: GAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCAT...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATTCCCACCGCCACCCCTaGGGCGCTCGGCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDSHRHP*GARPSK
Trigger: CTTCGACGGCCGAGCGCCCCAGGGGTGGCGGTGGGA...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR CCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCCTCAGTCGCCCAGGCTaGAGCACAGTGGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPLSRPG*STVAPS
Trigger: AGATGGCGCCACTGTGCTCCAGCCTGGGCGACTGAG...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGCTTCCGAGGCCATGTTaGCTAGGCTGGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLLPRPC*LGWWAP
Trigger: GGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAG...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGTCCGCAGCCTTCCCGTaGACATGTCACTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGSAAFP*TCHSSG
Trigger: GCCACTGGAGTGACATGTTCACGGGAAGGCTGCGGA...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTTCCGCAGCCTTCCCGTaGACATGTCACTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPSAAFP*TCHSSG
Trigger: GCCACTGGAGTGACATGTTCACGGGAAGGCTGCGGA...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCAGGGTGAAGCAGGCTaGGCTCTTGAGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGQGEAG*ALEQGL
Trigger: GAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTG...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGACACGACTTTATTTGTaGAGCCCCCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKTRLYL*SPRAQP
Trigger: GGGCTGTGCCCGGGGGCTTCACAAATAAAGTCGTGT...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGCAGTTTCCCCATTTGTaGAAGGAGCCAGCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGQFPHL*KEPAPL
Trigger: GAGCGGCGCTGGCTCCTTTCACAAATGGGGAAACTG...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR TCA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGGGTGGGAGGATTGATTaGGCCCCGGAGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWGGRID*APETEA
Trigger: AGCCTCTGTCTCCGGGGCTCAATCAATCCTCCCACC...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGCCTGGGCCCCTTCAGTaGATGGCAGTCAAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGPGPLQ*MAVKSQ
Trigger: TTGGGACTTGACTGCCATTCACTGAAGGGGCCCAGG...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGACATTCGGTCAGAGCTaGAGCCAGGATCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGTFGQS*SQDLAA
Trigger: GGCGGCAAGATCCTGGCTGCAGCTCTGACCGAATGT...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGGCCGCGGATGGCATCTaGAATGGCAACTGCACCCTT +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGAADGI*NGNCTL
Trigger: AAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGC...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGCAGCTCAGCTTTGTCTaGCATGGCCTCAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQQLSFV*HGLSNS
Trigger: GCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTG...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGGACACAGACCCGCCCTaGCTGTGGCCAGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPDTDPP*LWPESC
Trigger: ACAGGACTCTGGCCACAGGCAGGGCGGGTCTGTGTC...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCCAGGAGGCACAGACCTaGACATGCGCCACACCCACA +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPQEAQT*TCATPT
Trigger: TGTGGGTGTGGCGCATGTGCAGGTCTGTGCCTCCTG...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTTGTGGGGCCCAGGGTTaGCCTCTGCCAACAACCCCA +
Preference number: 4 (lower is better)
Translates to: AEISRAPSGGGEFNGGAACGAQG*PLPTTP
Trigger: TGGGGTTGTTGGCAGAGGGCAACCCTGGGCCCCACA...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGGCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGTGGGGCAGTCACGGGTaGTCAGGGAGGTCATACAGC +
Preference number: 4 (lower is better)
Translates to: QAGKWAPTQDCHFPGSGLWGSHG*SGRSYS
Trigger: GCTGTATGACCTCCCTGAGCACCCGTGACTGCCCCA...CAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCGCCCCCACTCAGGACTaGCACTTCCCAGGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGAPTQD*HFPGSG
Trigger: GCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGC...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp ATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGTGACGAGAAGCAGCCCAGGGGTCAGCCCCACTaGACGTCTGGTTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: MVGVTAAAGPGLGDEKQPRGQPH*TSGFNR
Trigger: ACGGTTGAAACCAGACGTGCAGTGGGGCTGACCCCT...GGGCTGCTTCTCGTCACCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGGCTTGCCTTGGGCACTaGATTTCCGGTGACATTCGG +
Preference number: 4 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWACLGH*ISGDIR
Trigger: CCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGC...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGCCATTCTGTGGCATGTaGACCTCCTCCAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGPFCGM*TSSRVP
Trigger: CGGGACCCTGGAGGAGGTCCACATGCCACAGAATGG...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCTGGCAACTGCACCCTTaGAGCGCACCAGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGWQLHP*SAPGSP
Trigger: GGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCA...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGTGGCAACTGCACCCTTaGAGCGCACCAGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGWQLHP*SAPGSP
Trigger: GGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCA...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCAGGCCGCCGCGGATaGCATCTGCAATGGCAACTG +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGAAGRRG*HLQWQL
Trigger: CAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGC...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTTCTTCCGTGAGGGCGTaGCTGACTTCTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPSSVRA*LTSLPA
Trigger: GGCAGGGAGAGAAGTCAGCCACGCCCTCACGGAAGA...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTGACGTCTGCAGGAGGTaGGGAGGACAGCACGGGAGC +
Preference number: 4 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGDVCRR*GGQHGS
Trigger: GCTCCCGTGCTGTCCTCCCCACCTCCTGCAGACGTC...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGTCAGCACGGAGCTCTTaGGCCCTAGGCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPSARSS*ALGAAA
Trigger: AGCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGA...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGGACGTGTCAGTCTGCTaGGCTATCAGCACGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGDVSVC*AISTEL
Trigger: GAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTC...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAACGCGGGCAACTCCCTaGGTTCTGGCTCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTTRATP*VLAPPG
Trigger: CCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGT...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp TCTCAGCAGCCAGGAGAAGGCCCACTAGGTCCGGGGCCAGCGCAGTCCCAGCAGCCCTCTAAGAAACCTTaGAGGGACTTCTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQQPGEGPLGPGPAQSQQPSKKP*RDFLEA
Trigger: GGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGG...CTGCTGGGACTGCGCTGGCCCCGGACCTAGTGGGCCTTCTCCTGGCTGCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGGCTGGTGGGCTCCCCTaGAGATCTGCAGACTGTAAT +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQAGGLP*RSADCN
Trigger: ATTACAGTCTGCAGATCTCCAGGGGAGCCCACCAGC...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR CCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGTCTGGTTTCAACCGTaGCCGGGAGACTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLVWFQP*PGDWAG
Trigger: GCCTGCCCAGTCTCCCGGCCACGGTTGAAACCAGAC...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCCTAAGGCCTTGGCGATaGCCCTGGCTGCTTCCACGC +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFLRPWR*PWLLPR
Trigger: GCGTGGAAGCAGCCAGGGTCATCGCCAAGGCCTTAG...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp ATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGTGACGAGAAGCAGCCCGCACTGGATTTCCGGTaGCATTCGGTCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: MVGVTAAAGPGLGDEKQPALDFR*HSVRAA
Trigger: TGCAGCTCTGACCGAATGTCACCGGAAATCCAGTGC...GGGCTGCTTCTCGTCACCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCGCACCTTGGCCATGTTaGAGCCCTCCAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGAPWPC*SPPAPP
Trigger: AGGAGGTGCTGGAGGGCTTCAACATGGCCAAGGTGC...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCGATGGGAAGATCGCTTaGGCCCAGCAGCTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPDGKIA*AQQLKT
Trigger: GGTCTTGAGCTGCTGGGCTCAAGCGATCTTCCCATC...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAAAGCACACACCTGCTTaGGCATCTTGGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGKHTPA*ASWLFS
Trigger: AGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTT...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGCCCAGCAACACCATGTaGGCTGCCCATTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPPSNTM*AAHFLG
Trigger: GCCCAGGAAATGGGCAGCTCACATGGTGTTGCTGGG...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCGGCGATGACCCTGGCTaGTTCCACGCCCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGGDDPG*FHAHCV
Trigger: AACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCC...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTTCAGGGCCAGAGGCTTaGCTTGGGCACTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPSGPEA*LGHWIS
Trigger: GGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGA...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGAGACCCTAAAAGCTTCTaGCAAGGCAGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRDPKSF*QGSGAI
Trigger: GATGGCGCCACTGCCTTGGCAGAAGCTTTTAGGGTC...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGAAGGTGGAGACGTCTaGAGGAGGTGGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGAEGGDV*RRWGGQ
Trigger: CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTC...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCACCTTGTACAGCGTCTaGAGCAGACTGTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SPDWRTALGCQHSPSSQATLYSV*SRLWRA
Trigger: CGCCCGCCACAGTCTGCTGCAGACGCTGTACAAGGT...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCAGGAGGCACAGACCTaGACATGCGCCACACCCACA +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGQEAQT*TCATPT
Trigger: TGTGGGTGTGGCGCATGTGCAGGTCTGTGCCTCCTG...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGGTAGGGGTGACAGCTaGCGCAGGACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTGRGDS*RRTRAW
Trigger: CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACGGACATTGGGGACCCTaGCTCTCCCTCCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHGHWGP*LSLPRL
Trigger: CAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCC...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTTCTGCAGGGCTGACTaGCCCACAGACTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFFCRAD*PTDCCG
Trigger: CCCGCAGCAGTCTGTGGGGCAGTCAGCCCTGCAGAA...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCAGAAGCCAAGCGAGCTaGAGCCCAAAGGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SPDWRTALGCQHSPSSQARSQAS*SPKAGC
Trigger: GCACCCTGCCTTTGGGCTGCAGCTCGCTTGGCTTCT...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCTCCTCTGCTAAACTaGCGCAGCTGGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGPPLLN*RSWTPS
Trigger: GCTGGGTGTCCAGCTGCGGCAGTTTAGCAGAGGAGG...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCGCTGGTGGGCTCCCCTaGAGATCTGCAGACGTAAAC +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPAGGLP*RSADVN
Trigger: GTTTACGTCTGCAGATCTCCAGGGGAGCCCACCAGC...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGCCATTCTGTGGCATGTaGACCTCCTCCAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLPFCGM*TSSRVP
Trigger: CGGGACCCTGGAGGAGGTCCACATGCCACAGAATGG...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGGTTGATCCCATTCTGTaGCATGTGGACCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQVDPIL*HVDLLQ
Trigger: CTGGAGGAGGTCCACATGCCACAGAATGGGATCAAC...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCATCTTCCGTGAGGGCGTaGCTGACTTCTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGASSVRA*LTSLPA
Trigger: GGCAGGGAGAGAAGTCAGCCACGCCCTCACGGAAGA...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACTCAGCACGGAGCTCTTaGGCCCTAGGCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHSARSS*ALGAAA
Trigger: AGCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGA...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGTGCTCCTGGACAATCTaGTGTCTGCCTGTCCACACG +
Preference number: 4 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKCSWTI*CLPVHT
Trigger: CGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCA...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCCATGCTCTGCCGAGGTaGGACTCCACGTACAACGGC +
Preference number: 4 (lower is better)
Translates to: SPDWRTALGCQHSPSSQAHALPR*DSTYNG
Trigger: GCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATG...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCCTTGGAGGGACTTCTTaGAGGCCGTTTGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPLGGTS*RPFVGD
Trigger: GTCCCCCACAAACGGCCTCCAAGAAGTCCCTCCAAG...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CAA 72 bp TGCCTCTCCCTCCCCAGACTGGAGAACAGCTTTGGGTaGTCAACACTCCCCCTCCAGCCAGGCCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: CLSLPRLENSFG*STLPLQPGQSQ
Trigger: CTGTGACTGGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGAGGGAGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACTCCGCAGCCTTCCCGTaGACATGTCACTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHSAAFP*TCHSSG
Trigger: GCCACTGGAGTGACATGTTCACGGGAAGGCTGCGGA...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCAGGCTGAGCTCTTaGGCAGGGCCTCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHSRLSS*AGPRSL
Trigger: AAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCT...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp TCTCAGCAGCCAGGAGAAGGCCCACTAGGTCCGGGGCCAGCGCAGTCCCAGCAGGGGCAGCATCCCTCTTaGTTTCACAGAATGACAAGT +
Preference number: 4 (lower is better)
Translates to: SQQPGEGPLGPGPAQSQQGQHPS*FHRMTS
Trigger: ACTTGTCATTCTGTGAAATCAAGAGGGATGCTGCCC...CTGCTGGGACTGCGCTGGCCCCGGACCTAGTGGGCCTTCTCCTGGCTGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGCCCTCCAGCACCTCCTaGAGCTGTTCACAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLPSSTS*SCSQPS
Trigger: AGAAGGCTGTGAACAGCTTCAGGAGGTGCTGGAGGG...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGCCCTCCAGCACCTCCTaGAGCTGTTCACAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPPSSTS*SCSQPS
Trigger: AGAAGGCTGTGAACAGCTTCAGGAGGTGCTGGAGGG...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGAGGACCAGGGCTTGGTaGCGAGAAGCAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRRTRAW*REAAPG
Trigger: GCCTGGGGCTGCTTCTCGTCACCAAGCCCTGGTCCT...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCTCTGCTCTTCAGGCTaGGCGGTCAGCACAGTGGTA +
Preference number: 4 (lower is better)
Translates to: AEISRAPSGGGEFNGGAALCSSG*AVSTVV
Trigger: TACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAG...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCCTAGCAGCTGCAGGCTaGGCTGCTCTGGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTLAAAG*AALASQ
Trigger: CTGACTCGCCAGAGCAGCTCAGCCTGCAGCTGCTAG...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR TCA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGTGGAGATCTGCAGACTaGGGAGGCCAAAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKWRSAD*GGQSCS
Trigger: ACTGCAACTTTGGCCTCCTCAGTCTGCAGATCTCCA...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGCAGGGCTGCTACCTATaGAGCCCTACTATACTCAAG +
Preference number: 4 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWQGCYL*SPTILK
Trigger: CTTGAGTATAGTAGGGCTTCATAGGTAGCAGCCCTG...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGCTTGGCAAGTGTCTCTaGCAGCTTGGCAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQLGKCL*QLGNVF
Trigger: GAAGACATTGCCAAGCTGGCAGAGACACTTGCCAAG...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCGGCGATGACCCTGGCTaGTTCCACGCCCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFGDDPG*FHAHCV
Trigger: AACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCC...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTGACCCTAAAAGCTTCTaGCAAGGCAGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPDPKSF*QGSGAI
Trigger: GATGGCGCCACTGCCTTGGCAGAAGCTTTTAGGGTC...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp ATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGTGACGAGAAGCAGCCCCATCAGGGCATCTACTaGATCCTGCACTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: MVGVTAAAGPGLGDEKQPHQGIY*ILHCHP
Trigger: AGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATG...GGGCTGCTTCTCGTCACCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACACCTTGTACAGCGTCTaGAGCAGACTGTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHTLYSV*SRLWRA
Trigger: CGCCCGCCACAGTCTGCTGCAGACGCTGTACAAGGT...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCGGCAATGGCGTAGGCTaGGCCTCAGTTCATCCGAGT +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGGNGVG*ASVHPS
Trigger: ACTCGGATGAACTGAGGCGCAGCCTACGCCATTGCC...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCGGACAATCTGGTGTCTaGCTGTCCACACGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGGQSGV*LSTRCG
Trigger: CCCACACCGTGTGGACAGGCAGACACCAGATTGTCC...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGAGAGCAGCGTCCAGATaGAGCTCGGACATTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPRAASR*SSDIGD
Trigger: GTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTCT...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTAGAGCAGCGTCCAGATaGAGCTCGGACATTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AEISRAPSGGGEFNGGAARAASR*SSDIGD
Trigger: GTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTCT...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCACCCTACCGCTCCCCTaGCCCAGGAGGTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFTLPLP*PRRSFK
Trigger: CTTAAAGGACCTCCTGGGGCAGGGGAGCGGTAGGGT...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCCAGGGTATGGTGGTGTaGACCAGTAATCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPQGMVV*TSNPSH
Trigger: GTGGCTGGGATTACTGGTGCACACCACCATACCCTG...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCCGGCCACCTGAGTCTTaGCAAGTGTCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPDWRTALGCQHSPSSQARPPES*QVSLPA
Trigger: AGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCG...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGCAGGCCGCCGCGGATaGCATCTGCAATGGCAACTG +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTAGRRG*HLQWQL
Trigger: CAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACATCAGCTCCTTTAGCTTaGGCAGGCCGCCGCGGATGG +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTSAPLA*AGRRGW
Trigger: CCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGA...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGAGGGCGCAGCAGCTTCTCTaGAGAGGGAAAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AGKWAPTQDCHFPGSGLRAQQLL*RGKSQE
Trigger: TTCCTGGCTTTTCCCTCTCCAGAGAAGCTGCTGCGC...CCTCAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGTCCTGTCCAAGGCAATaGCGTAGGCTGCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPSCPRQ*RRLRLS
Trigger: ACTGAGGCGCAGCCTACGCCATTGCCTTGGACAGGA...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATCCTGTCCACACGGTGTaGGGCCCAGGGTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDPVHTV*GPGLPS
Trigger: AGAGGGCAACCCTGGGCCCCACACCGTGTGGACAGG...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGTGCTCCTGGACAATCTaGTGTCTGCCTGTCCACACG +
Preference number: 4 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGCSWTI*CLPVHT
Trigger: CGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCA...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACATGCAGCTCGGACATTaGGGACCCTGCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHMQLGH*GPCLSL
Trigger: GAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCAT...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGGCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGACAAAGGGGAAAGCATaGGGCAGTCACGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QAGKWAPTQDCHFPGSGLTKGKA*GSHGCS
Trigger: TGAGCACCCGTGACTGCCCCATGCTTTCCCCTTTGT...CAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCACAAAGGGGAAAGCATaGGGCAGTCACGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPTKGKA*GSHGCS
Trigger: TGAGCACCCGTGACTGCCCCATGCTTTCCCCTTTGT...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGGCCAGGCAGGAAAATaGGCCCCCACTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTGQAGK*APTQDC
Trigger: GCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTGGCC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCAGGGTGAAGCAGGCTaGGCTCTTGAGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRQGEAG*ALEQGL
Trigger: GAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTG...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCACGGCGCCCTTCTCAGTaGAGGTGTTGTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGARRPSQ*RCCHSG
Trigger: ACCTGAATGACAACACCTTCACTGAGAAGGGCGCCG...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCGGCGCCCTTCTCAGTaGAGGTGTTGTCATTCAGGT +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGRRPSQ*RCCHSG
Trigger: ACCTGAATGACAACACCTTCACTGAGAAGGGCGCCG...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGACATACTCAGGGGACTaGCAGGACACATGGGACACA +
Preference number: 4 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWTYSGD*QDTWDT
Trigger: TGTGTCCCATGTGTCCTGTCAGTCCCCTGAGTATGT...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GCAGTATCCTCTGCCACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATAAGGACCAGGGCTTGGTaGCGAGAAGCAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVSSATWSPTWPTANEKIRTRAW*REAAPG
Trigger: GCCTGGGGCTGCTTCTCGTCACCAAGCCCTGGTCCT...TATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGATGGCTGTTCTCTGTTTaGGGGTCCCATTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRWLFSV*GSHSSN
Trigger: GTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCA...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGAGCTGCAGTAAGCTATaGCTGCCACTGCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLSCSKL*LPLHSS
Trigger: GCTGGAGTGCAGTGGCAGTCATAGCTTACTGCAGCT...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATAGGGCCTCGAAGCCTTaGACACCGTCGGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDRASKP*TPSGPN
Trigger: ATTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCT...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGTTAATCACCTCCACCTaGCGCAAGGTCTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGLITST*RKVFKV
Trigger: GACCTTGAAGACCTTGCGGCAGGTGGAGGTGATTAA...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGTTAATCACCTCCACCTaGCGCAAGGTCTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKLITST*RKVFKV
Trigger: GACCTTGAAGACCTTGCGGCAGGTGGAGGTGATTAA...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGCAGCTCAGCTTTGTCTaGCATGGCCTCAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPQLSFV*HGLSNS
Trigger: GCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTG...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCAGCTCAGCTTTGTCTaGCATGGCCTCAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGQLSFV*HGLSNS
Trigger: GCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTG...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACTTGAGCAGACCCATGTaGACGAGCAGCCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHLSRPM*TSSLVR
Trigger: CCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAA...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAACCTTGTACAGCGTCTaGAGCAGACTGTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTTLYSV*SRLWRA
Trigger: CGCCCGCCACAGTCTGCTGCAGACGCTGTACAAGGT...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGACACAGACCCGCCCTaGCTGTGGCCAGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRDTDPP*LWPESC
Trigger: ACAGGACTCTGGCCACAGGCAGGGCGGGTCTGTGTC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCCAGGAGGCACAGACCTaGACATGCGCCACACCCACA +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTQEAQT*TCATPT
Trigger: TGTGGGTGTGGCGCATGTGCAGGTCTGTGCCTCCTG...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATCCCAGGGTTGCCCTCTaGCAACAACCCCACGATCCG +
Preference number: 4 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDPRVAL*QQPHDP
Trigger: CGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGG...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGAGTCCCAGCAGCTCCTaGTCCTGGACAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGSPSSS*SWTIWC
Trigger: ACACCAGATTGTCCAGGAGCAGGAGCTGCTGGGACT...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGACCCTACCGCTCCCCTaGCCCAGGAGGTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: PMAFSALQAERSAQWYGWTLPLP*PRRSFK
Trigger: CTTAAAGGACCTCCTGGGGCAGGGGAGCGGTAGGGT...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAGGTCATACAGCATCTaGCCAGTCCAGACCCTACCG +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGRSYSI*PVQTLP
Trigger: CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCT...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAAGGTCATACAGCATCTaGCCAGTCCAGACCCTACCG +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGARSYSI*PVQTLP
Trigger: CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCT...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTAGGTCATACAGCATCTaGCCAGTCCAGACCCTACCG +
Preference number: 4 (lower is better)
Translates to: AEISRAPSGGGEFNGGAARSYSI*PVQTLP
Trigger: CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCT...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGCTTGCCTTGGGCACTaGATTTCCGGTGACATTCGG +
Preference number: 4 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLACLGH*ISGDIR
Trigger: CCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGC...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCTCAAGGTCTCGGCCATaGCCACGGCGCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRSRSRP*PRRPSQ
Trigger: CTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGA...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGACAGCACGGGAGCTaGCTCCCCAGTGTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDGQHGS*LPSVRV
Trigger: GACCCTAACACTGGGGAGCCAGCTCCCGTGCTGTCC...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGCGCAGCAGCTTCTCTaGAGAGGGAAAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLAQQLL*RGKSQE
Trigger: TTCCTGGCTTTTCCCTCTCCAGAGAAGCTGCTGCGC...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGGTCTGCAGCAGACTGTaGCGGGCGAAGGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PMAFSALQAERSAQWYGWVCSRL*RAKEQD
Trigger: ATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGAC...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTCCTGTCCAAGGCAATaGCGTAGGCTGCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFSCPRQ*RRLRLS
Trigger: ACTGAGGCGCAGCCTACGCCATTGCCTTGGACAGGA...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGAGGGTCAGCACAGTGGTATaGATGGTAGGGGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: AGKWAPTQDCHFPGSGLRVSTVV*MVGVTA
Trigger: AGCTGTCACCCCTACCATCCATACCACTGTGCTGAC...CCTCAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGAACTGGAGAACAGCTTTaGGTTGTCAACACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRTGEQL*VVNTPP
Trigger: AGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGT...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAACAAAGGGGAAAGCATaGGGCAGTCACGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGATKGKA*GSHGCS
Trigger: TGAGCACCCGTGACTGCCCCATGCTTTCCCCTTTGT...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGGCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGCGTTTGTGGGGGACATaGGCTCCCAAAGCACATACA +
Preference number: 4 (lower is better)
Translates to: QAGKWAPTQDCHFPGSGLRLWGT*APKAHT
Trigger: TGTATGTGCTTTGGGAGCCCATGTCCCCCACAAACG...CAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CAGGCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGACCTGGTCACCTACGTaGCCGACTGCCAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: QAGKWAPTQDCHFPGSGLTWSPT*PTANEK
Trigger: TTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGT...CAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTGTAGTCCCCATGACTTaGGAGGTTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AEISRAPSGGGEFNGGAAVVPMT*EVEVGG
Trigger: TCCTCCCACCTCAACCTCCCAAGTCATGGGGACTAC...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405486.5
CDS-3UTR CCA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGAAGCTCAAGACCAGTCTaGGCAACATGGCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRSSRPV*ATWQNP
Trigger: GGGATTTTGCCATGTTGCCCAGACTGGTCTTGAGCT...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCCTAAACTGCCGCAGCTaGACACCCAGCAACACCATG +
Preference number: 4 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGLNCRS*TPSNTM
Trigger: CATGGTGTTGCTGGGTGTCCAGCTGCGGCAGTTTAG...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp ATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGTGACGAGAAGCAGCCCGGGCAGCATCCCTCTTaGTTTCACAGAATGACAAGT +
Preference number: 4 (lower is better)
Translates to: MVGVTAAAGPGLGDEKQPGQHPS*FHRMTS
Trigger: ACTTGTCATTCTGTGAAATCAAGAGGGATGCTGCCC...GGGCTGCTTCTCGTCACCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGACATACTCAGGGGACTaGCAGGACACATGGGACACA +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPTYSGD*QDTWDT
Trigger: TGTGTCCCATGTGTCCTGTCAGTCCCCTGAGTATGT...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCACACGACTTTATTTGTaGAGCCCCCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTTRLYL*SPRAQP
Trigger: GGGCTGTGCCCGGGGGCTTCACAAATAAAGTCGTGT...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAACACGACTTTATTTGTaGAGCCCCCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTTRLYL*SPRAQP
Trigger: GGGCTGTGCCCGGGGGCTTCACAAATAAAGTCGTGT...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGGAGTTTCTGAGTCTCTaGAGCTGCCACACGACTTTA +
Preference number: 4 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGEFLSL*SCHTTL
Trigger: TAAAGTCGTGTGGCAGCTTCAGAGACTCAGAAACTC...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTAGACAGAGGCTACAGTaGGCCATGATCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLRQRLQ*AMISPL
Trigger: CAGTGGTGAGATCATGGCTCACTGTAGCCTCTGTCT...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACATCAGGGCCAGAGGCTTaGCTTGGGCACTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTSGPEA*LGHWIS
Trigger: GGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGA...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGTCTCCAGACGGTTTCTaGCAGCCACAAAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGSPDGF*QPQRPS
Trigger: TGAAGGTCTTTGTGGCTGGCAGAAACCGTCTGGAGA...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTTCTCCAGACGGTTTCTaGCAGCCACAAAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPSPDGF*QPQRPS
Trigger: TGAAGGTCTTTGTGGCTGGCAGAAACCGTCTGGAGA...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGTACTGCATCCTGCACTaGCATCCTCACAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWYCILH*HPHSSF
Trigger: GAAGCTACTGTGAGGATGGCAGTGCAGGATGCAGTA...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGCATCAGGGCATCTACTaGATCCTGCACTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPHQGIY*ILHCHP
Trigger: AGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATG...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCACATCAGGGCATCTACTaGATCCTGCACTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGAHQGIY*ILHCHP
Trigger: AGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATG...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACATTGAGCAGACCCATGTaGACGAGCAGCCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTLSRPM*TSSLVR
Trigger: CCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAA...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCAGTATCCTCTGCCACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATGTGGGGCCCAGGGTTaGCCTCTGCCAACAACCCCA +
Preference number: 4 (lower is better)
Translates to: AVSSATWSPTWPTANEKICGAQG*PLPTTP
Trigger: TGGGGTTGTTGGCAGAGGGCAACCCTGGGCCCCACA...TATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGGACAATCTGGTGTCTaGCTGTCCACACGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTGQSGV*LSTRCG
Trigger: CCCACACCGTGTGGACAGGCAGACACCAGATTGTCC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACTTTATTTGTGAAGCCCCCTGCTGCGGGGCCGCATaGTCTGCCGAGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: VRVSESLKLPHDFICEAPCCGAA*SAEVGL
Trigger: GAGTCCCACCTCGGCAGAGCATGCGGCCCCGCAGCA...GGGGGCTTCACAAATAAAGTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGAACATGTCACTCCAGTaGCAGCGCTTCAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGNMSLQ*QRFNSD
Trigger: GTCGGAGTTGAAGCGCTGCCACTGGAGTGACATGTT...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGTTGATCCCATTCTGTaGCATGTGGACCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLVDPIL*HVDLLQ
Trigger: CTGGAGGAGGTCCACATGCCACAGAATGGGATCAAC...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCGCAGTGATGCCAGGGTaGTTGATCCCATTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFAVMPG*LIPFCG
Trigger: GCCACAGAATGGGATCAACCACCCTGGCATCACTGC...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGACGTGTCAGTCTGCTaGGCTATCAGCACGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTDVSVC*AISTEL
Trigger: GAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACATCCTGTCCAAGGCAATaGCGTAGGCTGCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTSCPRQ*RRLRLS
Trigger: ACTGAGGCGCAGCCTACGCCATTGCCTTGGACAGGA...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCATCTCCCTCCCCAGACTaGAGAACAGCTTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGASPSPD*RTALGC
Trigger: ACAACCCAAAGCTGTTCTCCAGTCTGGGGAGGGAGA...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTCTTGGCAAGTGTCTCTaGCAGCTTGGCAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLLGKCL*QLGNVF
Trigger: GAAGACATTGCCAAGCTGGCAGAGACACTTGCCAAG...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATACATTCGGTCAGAGCTaGAGCCAGGATCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDTFGQS*SQDLAA
Trigger: GGCGGCAAGATCCTGGCTGCAGCTCTGACCGAATGT...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCTCAGGGCCAGAGGCTTaGCTTGGGCACTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRSGPEA*LGHWIS
Trigger: GGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGA...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCATCTCCAGACGGTTTCTaGCAGCCACAAAGACCTTCA +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGASPDGF*QPQRPS
Trigger: TGAAGGTCTTTGTGGCTGGCAGAAACCGTCTGGAGA...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGTTAATCACCTCCACCTaGCGCAAGGTCTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGLITST*RKVFKV
Trigger: GACCTTGAAGACCTTGCGGCAGGTGGAGGTGATTAA...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGCCGCGGATGGCATCTaGAATGGCAACTGCACCCTT +
Preference number: 4 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRAADGI*NGNCTL
Trigger: AAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCGCCGCGGATGGCATCTaGAATGGCAACTGCACCCTT +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRAADGI*NGNCTL
Trigger: AAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGC...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCAGTCCCAGCAGCTCCTaGTCCTGGACAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTSPSSS*SWTIWC
Trigger: ACACCAGATTGTCCAGGAGCAGGAGCTGCTGGGACT...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTCCCAGAGAATCTGTTTaGAGCCTCACTCCCTATTCC +
Preference number: 4 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLPRESV*SLTPYS
Trigger: GGAATAGGGAGTGAGGCTGCAAACAGATTCTCTGGG...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTAACATGTCACTCCAGTaGCAGCGCTTCAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGNMSLQ*QRFNSD
Trigger: GTCGGAGTTGAAGCGCTGCCACTGGAGTGACATGTT...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCTTGCCTTGGGCACTaGATTTCCGGTGACATTCGG +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTACLGH*ISGDIR
Trigger: CCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGC...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCAGTGATGCCAGGGTaGTTGATCCCATTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTAVMPG*LIPFCG
Trigger: GCCACAGAATGGGATCAACCACCCTGGCATCACTGC...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGGATGGCATCTGCAATaGCAACTGCACCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTGWHLQ*QLHPWS
Trigger: GCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGGATGGCATCTGCAATaGCAACTGCACCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTGWHLQ*QLHPWS
Trigger: GCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCC...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp ATATGTGGCAGTGGAGCAAAGGATCCCAAGGGAGGTGGCTTCCATAGTGAAGGATCAGCTCCTTTAGCTTaGGCAGGCCGCCGCGGATGG +
Preference number: 4 (lower is better)
Translates to: ICGSGAKDPKGGGFHSEGSAPLA*AGRRGW
Trigger: CCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGA...TCCTTCACTATGGAAGCCACCTCCCTTGGGATCCTTTGCTCCACTGCCACATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGACGTGTCAGTCTGCTaGGCTATCAGCACGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRDVSVC*AISTEL
Trigger: GAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACTCTCCCTCCCCAGACTaGAGAACAGCTTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHSPSPD*RTALGC
Trigger: ACAACCCAAAGCTGTTCTCCAGTCTGGGGAGGGAGA...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCGGCCCCTTCAGTGAATaGCAGTCAAGTCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFGPFSE*QSSPKP
Trigger: TGGTTTGGGACTTGACTGCCATTCACTGAAGGGGCC...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp GTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACTTTATTTGTGAAGCCCCCCTTCCGAGGCCATGTTaGCTAGGCTGGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VRVSESLKLPHDFICEAPLPRPC*LGWWAP
Trigger: GGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAG...GGGGGCTTCACAAATAAAGTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp GAGACTATCCCGCTTTCAGTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACAGCAGGCTGAGCTCTTaGGCAGGGCCTCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ETIPLSVRVSESLKLPHDSRLSS*AGPRSL
Trigger: AAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCT...GTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAAAGCGGGATAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGCACTGGATTTCCGGTaGCATTCGGTCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRALDFR*HSVRAA
Trigger: TGCAGCTCTGACCGAATGTCACCGGAAATCCAGTGC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCTTCAGTGAGAGTTTCTaGGTCTCTGAAGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SPDWRTALGCQHSPSSQAFSESF*VSEAAT
Trigger: TGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAA...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGGCAGGAGGATCATTTaGGCCCAGGAGTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTGRRII*AQEFKA
Trigger: AGCTTTGAACTCCTGGGCTCAAATGATCCTCCTGCC...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp CCACGTTGTAGCTGGCATCAGAACTTAATGCCAGCCCCACACCCACCCCCTACCTACTGCATCCTGCACTaGCATCCTCACAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRCSWHQNLMPAPHPPPTYCILH*HPHSSF
Trigger: GAAGCTACTGTGAGGATGGCAGTGCAGGATGCAGTA...GGTAGGGGGTGGGTGTGGGGCTGGCATTAAGTTCTGATGCCAGCTACAACGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTACTGCATCCTGCACTaGCATCCTCACAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: NPITTQRGRTARGQLPGFYCILH*HPHSSF
Trigger: GAAGCTACTGTGAGGATGGCAGTGCAGGATGCAGTA...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGACTATCCCGCTTTCAGTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACACCCTACCGCTCCCCTaGCCCAGGAGGTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: ETIPLSVRVSESLKLPHDTLPLP*PRRSFK
Trigger: CTTAAAGGACCTCCTGGGGCAGGGGAGCGGTAGGGT...GTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAAAGCGGGATAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp AAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTTGTGGGGACTGCCCCACAGACTaGTGCGGGGCCGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: KILPSKKPWRDFLEAVCGDCPTD*CGAACS
Trigger: AGAGCATGCGGCCCCGCAGCAGTCTGTGGGGCAGTC...CCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCGCCCAAGCACACACCTaGTTGAGCATCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTAQAHT*LSILAV
Trigger: AACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGC...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR GCA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATCAACACCATGTGAGCTaGCCATTTCCTGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDQHHVS*PFPGPL
Trigger: AAGGGGCCCAGGAAATGGGCAGCTCACATGGTGTTG...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGAACATGTCACTCCAGTaGCAGCGCTTCAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: PMAFSALQAERSAQWYGWNMSLQ*QRFNSD
Trigger: GTCGGAGTTGAAGCGCTGCCACTGGAGTGACATGTT...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCACCCAAAGCACATACATaGTGTAGGGTAGGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: QAEISRAPSGGGEFNGGAPKAHT*CRVGGK
Trigger: CTTACCTCCTACCCTACACCATGTATGTGCTTTGGG...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GTAAGGAAGGTTGGCTGGGCTGTCCTCACATATGTGGCAGTGGAGCAAAGGATCGTATCCTCTGCCACCTaGTCACCTACGTGGCCGACT +
Preference number: 4 (lower is better)
Translates to: VRKVGWAVLTYVAVEQRIVSSAT*SPTWPT
Trigger: AGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATAC...GATCCTTTGCTCCACTGCCACATATGTGAGGACAGCCCAGCCAACCTTCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp ACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAACAGGGTGAAGCAGGCTaGGCTCTTGAGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TWSPTWPTANEKILPSKKQGEAG*ALEQGL
Trigger: GAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTG...TTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCACATACTCAGGGGACTaGCAGGACACATGGGACACA +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRTYSGD*QDTWDT
Trigger: TGTGTCCCATGTGTCCTGTCAGTCCCCTGAGTATGT...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR GCA 90 bp GAGACTATCCCGCTTTCAGTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACAGAGCAGCGTCCAGATaGAGCTCGGACATTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ETIPLSVRVSESLKLPHDRAASR*SSDIGD
Trigger: GTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTCT...GTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAAAGCGGGATAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp CATCACCACTCTCCATTTCCAGAACATCTTCATCATCCCAGAGAATCTGTTTGCGAGGCCGGGCCCTTCTaGAGGGCTGACTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: HHHSPFPEHLHHPRESVCEAGPF*RADCPT
Trigger: TGTGGGGCAGTCAGCCCTGCAGAAGGGCCCGGCCTC...GCAAACAGATTCTCTGGGATGATGAAGATGTTCTGGAAATGGAGAGTGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GAGACTATCCCGCTTTCAGTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACGCCAGCAGTATCCTCTaGCACCTGGTCACCTACGTG +
Preference number: 4 (lower is better)
Translates to: ETIPLSVRVSESLKLPHDASSIL*HLVTYV
Trigger: CACGTAGGTGACCAGGTGGCAGAGGATACTGCTGGC...GTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAAAGCGGGATAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GTAAGGAAGGTTGGCTGGGCTGTCCTCACATATGTGGCAGTGGAGCAAAGGATCGCAGTGATGCCAGGGTaGTTGATCCCATTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VRKVGWAVLTYVAVEQRIAVMPG*LIPFCG
Trigger: GCCACAGAATGGGATCAACCACCCTGGCATCACTGC...GATCCTTTGCTCCACTGCCACATATGTGAGGACAGCCCAGCCAACCTTCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCGTCAGCACAGTGGTATaGATGGTAGGGGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRVSTVV*MVGVTA
Trigger: AGCTGTCACCCCTACCATCCATACCACTGTGCTGAC...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGTCAGCACAGTGGTATaGATGGTAGGGGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRVSTVV*MVGVTA
Trigger: AGCTGTCACCCCTACCATCCATACCACTGTGCTGAC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGCTGTCCTCACATATGTaGCAGTGGAGCAAAGGATCC +
Preference number: 4 (lower is better)
Translates to: PMAFSALQAERSAQWYGWLSSHM*QWSKGS
Trigger: GGATCCTTTGCTCCACTGCCACATATGTGAGGACAG...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCTTGGCAAGTGTCTCTaGCAGCTTGGCAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRLGKCL*QLGNVF
Trigger: GAAGACATTGCCAAGCTGGCAGAGACACTTGCCAAG...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CCA 90 bp GCAGAAGACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCACTGGAGAACAGCTTTaGGTTGTCAACACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AEDVKTQIPTGGTDLHMRTGEQL*VVNTPP
Trigger: AGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGT...GCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR TCA 90 bp GTTTTCAAAGTTCATCCACGTTGTAGCTGGCATCAGAACTTAATGCCAGCCCCAGCACCTTGGCCATGTTaGAGCCCTCCAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: VFKVHPRCSWHQNLMPAPAPWPC*SPPAPP
Trigger: AGGAGGTGCTGGAGGGCTTCAACATGGCCAAGGTGC...TGGGGCTGGCATTAAGTTCTGATGCCAGCTACAACGTGGATGAACTTTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GTTTTCAAAGTTCATCCACGTTGTAGCTGGCATCAGAACTTAATGCCAGCCCCACCACGCCCACTGTGTTaGCTTCCAGACGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VFKVHPRCSWHQNLMPAPPRPLC*LPDAEP
Trigger: AGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGG...TGGGGCTGGCATTAAGTTCTGATGCCAGCTACAACGTGGATGAACTTTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACTTTATTTGTGAAGCCCCCAGTCCCAGCAGCTCCTaGTCCTGGACAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VRVSESLKLPHDFICEAPSPSSS*SWTIWC
Trigger: ACACCAGATTGTCCAGGAGCAGGAGCTGCTGGGACT...GGGGGCTTCACAAATAAAGTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGACATTCACAATGTTATaGAACCATCACCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLTFTML*NHHHSP
Trigger: TGGAGAGTGGTGATGGTTGCATAACATTGTGAATGT...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp GTAAGGAAGGTTGGCTGGGCTGTCCTCACATATGTGGCAGTGGAGCAAAGGATCGTAAGGAAGGTTGGCTaGGCTGTCCTCACATATGTG +
Preference number: 4 (lower is better)
Translates to: VRKVGWAVLTYVAVEQRIVRKVG*AVLTYV
Trigger: CACATATGTGAGGACAGCCCAGCCAACCTTCCTTAC...GATCCTTTGCTCCACTGCCACATATGTGAGGACAGCCCAGCCAACCTTCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGGACACAGATGGCTATaGGATCCAGATCATTCATCC +
Preference number: 4 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRGHRWL*DPDHSS
Trigger: GGATGAATGATCTGGATCCCATAGCCATCTGTGTCC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CCA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGCAAACAGGACACAGATaGCTATGGGATCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: PMAFSALQAERSAQWYGWQTGHR*LWDPDH
Trigger: ATGATCTGGATCCCATAGCCATCTGTGTCCTGTTTG...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR TCA 90 bp AAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTTGTGGGGCACTGGATTTCCGGTaGCATTCGGTCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KILPSKKPWRDFLEAVCGALDFR*HSVRAA
Trigger: TGCAGCTCTGACCGAATGTCACCGGAAATCCAGTGC...CCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp ATTCACAATGTTATGCAACCATCACCACTCTCCATTTCCAGAACATCTTCATCATGCCCCACAGACTGCTaGGGGGCCGCATGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: IHNVMQPSPLSISRTSSSCPTDC*GAACSA
Trigger: GGCAGAGCATGCGGCCCCGCAGCAGTCTGTGGGGCA...TGATGAAGATGTTCTGGAAATGGAGAGTGGTGATGGTTGCATAACATTGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGCCAATGAGAAAATATTaGCCTCTAAGAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPPMRKY*PLRNLG
Trigger: TCCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGG...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp AATGAGAAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTCTCTGCTCTTCAGGCTaGGCGGTCAGCACAGTGGTA +
Preference number: 4 (lower is better)
Translates to: NEKILPSKKPWRDFLEAVLCSSG*AVSTVV
Trigger: TACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAG...AACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR GCA 90 bp GTTTTCAAAGTTCATCCACGTTGTAGCTGGCATCAGAACTTAATGCCAGCCCCAGACCCTAAAAGCTTCTaGCAAGGCAGTGGCGCCATC +
Preference number: 4 (lower is better)
Translates to: VFKVHPRCSWHQNLMPAPDPKSF*QGSGAI
Trigger: GATGGCGCCACTGCCTTGGCAGAAGCTTTTAGGGTC...TGGGGCTGGCATTAAGTTCTGATGCCAGCTACAACGTGGATGAACTTTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CCAGAACATCTTCATCATCCCAGAGAATCTGTTTGCAGCCTCACTCCCTATTCCGTTGATCCCATTCTGTaGCATGTGGACCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PEHLHHPRESVCSLTPYSVDPIL*HVDLLQ
Trigger: CTGGAGGAGGTCCACATGCCACAGAATGGGATCAAC...GGAATAGGGAGTGAGGCTGCAAACAGATTCTCTGGGATGATGAAGATGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp TCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAACCTTGGTCTCCCTCCCCAGACTaGAGAACAGCTTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: SPTWPTANEKILPSKKPWSPSPD*RTALGC
Trigger: ACAACCCAAAGCTGTTCTCCAGTCTGGGGAGGGAGA...CCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CAA 72 bp TCCACCCTTCCCCTAGCCCTGGCAACCTCTACCTTCTaGTCTCTGAATTTGCTTATTCTAGATGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: STLPLALATSTF*SLNLLILDASS
Trigger: AGATGAGGCATCTAGAATAAGCAAATTCAGAGACAAGAAGGTAGAGGTTGCCAGGGCTAGGGGAAGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
3UTR CAA 72 bp ATTTCCAGAACATCTTCATCATCCCAGAGAATCTGTTaGCAGCCTCACTCCCTATTCCACCCTTCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: ISRTSSSSQRIC*QPHSLFHPSPS
Trigger: GCTAGGGGAAGGGTGGAATAGGGAGTGAGGCTGCAAACAGATTCTCTGGGATGATGAAGATGTTCTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp CTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCTTATTTCTAAGGCCTTGGCGATaGCCCTGGCTGCTTCCACGC +
Preference number: 4 (lower is better)
Translates to: LDASSKWNHICPFVSGLFLRPWR*PWLLPR
Trigger: GCGTGGAAGCAGCCAGGGTCATCGCCAAGGCCTTAG...AAATAAGCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCTTATTTTGGCAACTGCACCCTTaGAGCGCACCAGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LDASSKWNHICPFVSGLFWQLHP*SAPGSP
Trigger: GGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCA...AAATAAGCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CTTATTCTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCGTCTGCAGCAGACTGTaGCGGGCGAAGGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LILDASSKWNHICPFVSGVCSRL*RAKEQD
Trigger: ATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGAC...GCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp TCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAACCTTGGCATCCACGTTGTAGCTaGCATCAGAACTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: SPTWPTANEKILPSKKPWHPRCS*HQNLMP
Trigger: TGGCATTAAGTTCTGATGCCAGCTACAACGTGGATG...CCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR TCA 90 bp CATCACCACTCTCCATTTCCAGAACATCTTCATCATCCCAGAGAATCTGTTTGCGGGCAGCATCCCTCTTaGTTTCACAGAATGACAAGT +
Preference number: 4 (lower is better)
Translates to: HHHSPFPEHLHHPRESVCGQHPS*FHRMTS
Trigger: ACTTGTCATTCTGTGAAATCAAGAGGGATGCTGCCC...GCAAACAGATTCTCTGGGATGATGAAGATGTTCTGGAAATGGAGAGTGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CCA 90 bp CTTATTCTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCTCACATATGTGGCAGTaGAGCAAAGGATCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LILDASSKWNHICPFVSGSHMWQ*SKGSQG
Trigger: CCCTTGGGATCCTTTGCTCCACTGCCACATATGTGA...GCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAGAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp CTCCGCCAGGGAGCCGGGCCGGAAGGCAGGTGGGTGGGGACGGCCATCAGGGCCTCTTCCGAGGCCATGTaGACTAGGCTGGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LRQGAGPEGRWVGTAIRASSEAM*TRLVGS
Trigger: GGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGA...GGCCCTGATGGCCGTCCCCACCCACCTGCCTTCCGGCCCGGCTCCCTGGCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TCTCAGCAGCCAGGAGAAGGCCCACTAGGTCCGGGGCCAGCGCAGTCCCAGCAGCAGGGCCTCGAAGCCTaGCACACCGTCGGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: SQQPGEGPLGPGPAQSQQQGLEA*HTVGPE
Trigger: TTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCTG...CTGCTGGGACTGCGCTGGCCCCGGACCTAGTGGGCCTTCTCCTGGCTGCTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCAACCCGCAGCAGGGGGTaGACAGCGAAAGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPTRSRG*TAKAWA
Trigger: GGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGT...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TGCGGGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAACGGCCCCCGAGAAGGGCGCTGTTGGGCTaGGTCACGAACGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CGAACSAEVGLHVQRPPRRALLG*VTNASS
Trigger: GCTGCTGGCGTTCGTGACCAAGCCCAACAGCGCCCT...TCTCGGGGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGGATGCAGCTCGGACATaGGGGACCCTGCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGDAART*GTLPLP
Trigger: AGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATC...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACAGGGCGCTGTTGGGCTaGGTCACGAACGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHRALLG*VTNASS
Trigger: GCTGCTGGCGTTCGTGACCAAGCCCAACAGCGCCCT...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCATCCACGCCCACTGTGTaGCCTTCCAGACGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPSTPTV*PSRRRA
Trigger: GGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGA...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGGCCAGAGGCTTGCCTaGGGCACTGGATTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGGQRLA*GTGFPV
Trigger: CACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCC...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGGCCGCATGCTCTGCCGAGGTGGGACTCCACGTACAACGGCCCCCGAGACTATATCAGCACGGAGCTCTaGGGCCCTAGGCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPHALPRWDSTYNGPRDYISTEL*GPRRSS
Trigger: GCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGAT...ATAGTCTCGGGGGCCGTTGTACGTGGAGTCCCACCTCGGCAGAGCATGCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGATCAGCACGGAGCTCTaGGGCCCTAGGCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQISTEL*GPRRSS
Trigger: GCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGAT...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TCTCAGCAGCCAGGAGAAGGCCCACTAGGTCCGGGGCCAGCGCAGTCCCAGCAGTCTTCCGAGGCCATGTaGACTAGGCTGGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SQQPGEGPLGPGPAQSQQSSEAM*TRLVGS
Trigger: GGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGA...CTGCTGGGACTGCGCTGGCCCCGGACCTAGTGGGCCTTCTCCTGGCTGCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGCAGGGCCTCGAAGCCTaGCACACCGTCGGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGQGLEA*HTVGPE
Trigger: TTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCTG...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGCCCATGCCACAGTTGTaGAGCTTGAGTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGPMPQL*SLSSCR
Trigger: CCTGCAGGAACTCAAGCTCAACAACTGTGGCATGGG...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGACCCGCAGCAGGGGGTaGACAGCGAAAGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWTRSRG*TAKAWA
Trigger: GGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGT...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCAGGGGGCCGTACAGGTaGGCAATGGCCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTRGPYR*AMALTL
Trigger: CAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCT...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAAGGGGGCCGTACAGGTaGGCAATGGCCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGRGPYR*AMALTL
Trigger: CAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCT...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 90 bp GCCCTAGGCGCAGCAGCTTCTCTGGAGAGGGAAAAGCCAGGAAGGTaGAGACGTCTGCAGGAGGTGGGGAGGACAGCACGGGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ALGAAASLEREKPGR*RRLQEVGRTARELA
Trigger: AGCCAGCTCCCGTGCTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTTCCCTCTCCAGAGAAGCTGCTGCGCCTAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCAGGGCCTCGAAGCCTaGCACACCGTCGGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGQGLEA*HTVGPE
Trigger: TTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCTG...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGGCTGCAGCCAGGATCTaGCCGCCGCCAATGCCCATG +
Preference number: 5 (lower is better)
Translates to: QHSGMDGRGDSCRRTRAWAAARI*PPPMPM
Trigger: CATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGC...CCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGATTCAGCTCCTTTAGCTaGGGCAGGCCGCCGCGGATG +
Preference number: 5 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRFSSFS*GRPPRM
Trigger: CATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAA...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GAGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGAGCACCTTGGCCATGTaGAAGCCCTCCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: EQRPDAARTLGTLPLPPQSTLAM*KPSSTS
Trigger: GGAGGTGCTGGAGGGCTTCAACATGGCCAAGGTGCT...CTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGATCTTCCGAGGCCATGTaGACTAGGCTGGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRSSEAM*TRLVGS
Trigger: GGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGA...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGATTCTTCTCTAAGGCCTaGGCGATGACCCTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGFFSKA*AMTLAA
Trigger: AGCAGCCAGGGTCATCGCCAAGGCCTTAGAGAAGAA...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGGGCCAGAGGCTTGCCTaGGGCACTGGATTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGGQRLA*GTGFPV
Trigger: CACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCC...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGGTGTTGTCATTCAGGTaGATGACCCGCAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWVLSFR*MTRSRG
Trigger: CCCCCTGCTGCGGGTCATCAACCTGAATGACAACAC...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCATTCTCCAGCTCAGCTTaGTCTGCCATGGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPFSSSA*SAMASA
Trigger: TGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAA...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGGATGCAGCTCGGACATaGGGGACCCTGCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGDAART*GTLPLP
Trigger: AGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATC...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGTCCACGCCCACTGTGTaGCCTTCCAGACGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPSTPTV*PSRRRA
Trigger: GGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGA...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGCCCATGCCACAGTTGTaGAGCTTGAGTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWPMPQL*SLSSCR
Trigger: CCTGCAGGAACTCAAGCTCAACAACTGTGGCATGGG...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGCCAGAGGCTTGCCTaGGGCACTGGATTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLGQRLA*GTGFPV
Trigger: CACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCC...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCACCCGCAGCAGGGGGTaGACAGCGAAAGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTTRSRG*TAKAWA
Trigger: GGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGT...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGGTGTTGTCATTCAGGTaGATGACCCGCAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGVLSFR*MTRSRG
Trigger: CCCCCTGCTGCGGGTCATCAACCTGAATGACAACAC...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTAGCACCTTGGCCATGTaGAAGCCCTCCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPSTLAM*KPSSTS
Trigger: GGAGGTGCTGGAGGGCTTCAACATGGCCAAGGTGCT...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGAGGGACGCCAGCACCTaGGCCATGTTGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGRDAST*AMLKPS
Trigger: GGAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCT...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCATCAGCACGGAGCTCTaGGGCCCTAGGCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: NPITTQRGRTARGQLPGFISTEL*GPRRSS
Trigger: GCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGAT...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGATGCAGCTCGGACATaGGGGACCCTGCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLDAART*GTLPLP
Trigger: AGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATC...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS TCA 90 bp CATGCCACAGTTGTTGAGCTTGAGTTCCTGCAGGGTGAAGCAGGCTaGGCTCTTGAGCAGGGCCTCGAAGCCTTGCACACCGTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: HATVVELEFLQGEAG*ALEQGLEALHTVGP
Trigger: GGGCCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTGCAGGAACTCAAGCTCAACAACTGTGGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGCCAGGCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCTTGAGGCTCTTGCCTTaGAAACTCAGCTGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: GQAGKWAPTQDCHFPGSGLRLLP*KLSCPP
Trigger: CGGGGGACAGCTGAGTTTCAAAGGCAAGAGCCTCAA...GCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAGCCGGGTTGAGTTTGAGGCTCTaGCCTTTGAAACTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GRTARGQLPGFWLRQGAGLSLRL*PLKLSC
Trigger: ACAGCTGAGTTTCAAAGGCAAGAGCCTCAAACTCAA...CCCGGCTCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTTCGGGCCCGAATGCGTaGTCGCTTAAGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AEISRAPSGGGEFNGGAASGPNA*SLKSSS
Trigger: GGAGCTGGACTTAAGCGACAACGCATTCGGGCCCGA...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGTCGGGCCCGAATGCGTaGTCGCTTAAGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPSGPNA*SLKSSS
Trigger: GGAGCTGGACTTAAGCGACAACGCATTCGGGCCCGA...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGACTGGCCACAGTTGTTGAGCTaGAGTTCCTGCAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ASRCSSDIGDPASPSPDWPQLLS*SSCRVK
Trigger: CTTCACCCTGCAGGAACTCAAGCTCAACAACTGTGG...CCAGTCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTTCAGCTCCTTTAGCTaGGGCAGGCCGCCGCGGATG +
Preference number: 5 (lower is better)
Translates to: NPITTQRGRTARGQLPGFFSSFS*GRPPRM
Trigger: CATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAA...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTTCAGCTCCTTTAGCTaGGGCAGGCCGCCGCGGATG +
Preference number: 5 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGFSSFS*GRPPRM
Trigger: CATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAA...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGGATGGGTTCTCCAGCTCAGCTTaGTCTGCCATGGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ASVHPSPSPAHWSRPRDGFSSSA*SAMASA
Trigger: TGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAA...CCCATCCCTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTAGGGACGCCAGCACCTaGGCCATGTTGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGRDAST*AMLKPS
Trigger: GGAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCT...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACGCAATGGCCTTGACCTaGTCTTCACTCTTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHAMALT*SSLLSR
Trigger: TCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATTGC...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAAGGGCGCTGTTGGGCTaGGTCACGAACGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTRALLG*VTNASS
Trigger: GCTGCTGGCGTTCGTGACCAAGCCCAACAGCGCCCT...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACCTTCTTGGAGGCCGTTaGTGGGGGACATGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHLLGGR*WGTWAP
Trigger: GGGAGCCCATGTCCCCCACAAACGGCCTCCAAGAAG...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCATGTAATCCCAGCACATaGGGAAGCTGTGATGGGAAG +
Preference number: 5 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPCNPST*GSCDGK
Trigger: CTTCCCATCACAGCTTCCCAATGTGCTGGGATTACA...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS TCA 90 bp ATCTTCCGTGAGGGCGTGGCTGACTTCTCTCCCTGCCCTCGCTGCTaGGGCTCTTCTTCCTCCTCCTCCTCCTCTTCTTCCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: IFREGVADFSPCPRC*GSSSSSSSSSSSSS
Trigger: GGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAGCGAGGGCAGGGAGAGAAGTCAGCCACGCCCTCACGGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS GCA 90 bp TTGCCGCCGCCAATGCCCATGCCACAGTTGTTGAGCTTGAGTTCCTaGAGGGTGAAGCAGGCTGAGCTCTTGAGCAGGGCCTCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LPPPMPMPQLLSLSS*RVKQAELLSRASKP
Trigger: AGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTGCAGGAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CCA 90 bp AGCCTGGGCCAGGGCAGTGATGCCAGGGTGGTTGATCCCATTCTGTaGCATGTGGACCTCCTCCAGGGTCCCGATGACCCTAAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SLGQGSDARVVDPIL*HVDLLQGPDDPKSF
Trigger: GAAGCTTTTAGGGTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCACTGCCCTGGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGAGTGTCTCTGCCAGCTaGGCAATGTCTTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGSVSAS*AMSSEA
Trigger: GGCCTCGGAAGACATTGCCAAGCTGGCAGAGACACT...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGTGACGAGAAGCAGCCCCCACAGTTGTTGAGCTaGAGTTCCTGCAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: MVGVTAAAGPGLGDEKQPPQLLS*SSCRVK
Trigger: CTTCACCCTGCAGGAACTCAAGCTCAACAACTGTGG...GGGCTGCTTCTCGTCACCAAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGCTGCAGCCAGGATCTaGCCGCCGCCAATGCCCATG +
Preference number: 5 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRAAARI*PPPMPM
Trigger: CATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGGCAGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTGTGATGCCAGGGTGGTaGATCCCATTCTGTGGCATG +
Preference number: 5 (lower is better)
Translates to: GQSRVLREVIQHLPSPDPVMPGW*IPFCGM
Trigger: CATGCCACAGAATGGGATCAACCACCCTGGCATCAC...AGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTAGCACCTTGGCCATGTaGAAGCCCTCCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGSTLAM*KPSSTS
Trigger: GGAGGTGCTGGAGGGCTTCAACATGGCCAAGGTGCT...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGCTCCGCCAGGGAAGGAAGGTGTTGGAGTaGAAGGACGAGGAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: QRGRTARGQLPGFWLRQGRKVLE*KDEELK
Trigger: TTTCAACTCCTCGTCCTTCAACTCCAACACCTTCCT...TCCCTGGCGGAGCCAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACAGGAAGGTGTTGGAGTaGAAGGACGAGGAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHRKVLE*KDEELK
Trigger: TTTCAACTCCTCGTCCTTCAACTCCAACACCTTCCT...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGGATTCCAGGGCGCTGTaGGGCTTGGTCACGAACGCC +
Preference number: 5 (lower is better)
Translates to: PMAFSALQAERSAQWYGWDSRAL*GLVTNA
Trigger: GGCGTTCGTGACCAAGCCCAACAGCGCCCTGGAATC...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGGAGAACAGCTTTGGGTaGTCAACACTCCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGENSFG*STLPLQ
Trigger: CTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTC...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACCTTGGCTGTTCTCTGTTaGAGGGTCCCATTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: AQGCPLPTTPRSDPHSPTLAVLC*RVPFLK
Trigger: TTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAA...GGTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS TCA 90 bp AGTGGCAGCGCTTCAACTCCGACTTCTTCTCTAAGGCCTTGGCGATaGCCCTGGCTGCTTCCACGCCCACTGTGTTGCCTTCCAGACGCA +
Preference number: 5 (lower is better)
Translates to: SGSASTPTSSLRPWR*PWLLPRPLCCLPDA
Trigger: TGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS GCA 90 bp AAGCTTCTGCCAAGGCAGTGGCGCCATCATTCTCCAGACGGTTTCTaGCAGCCACAAAGACCTTCAGGGCCAGAGGCTTGCCTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: KLLPRQWRHHSPDGF*QPQRPSGPEACLGH
Trigger: GTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTTGTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGGCAGAAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 90 bp TGCCAGCCACAAAGACCTTCAGGGCCAGAGGCTTGCCTTGGGCACTaGATTTCCGGTGACATTCGGTCAGAGCTGCAGCCAGGATCTTGC +
Preference number: 5 (lower is better)
Translates to: CQPQRPSGPEACLGH*ISGDIRSELQPGSC
Trigger: GCAAGATCCTGGCTGCAGCTCTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTTGTGGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 90 bp GCCAGGGCAGTGATGCCAGGGTGGTTGATCCCATTCTGTGGCATGTaGACCTCCTCCAGGGTCCCGATGACCCTAAAAGCTTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: ARAVMPGWLIPFCGM*TSSRVPMTLKASAK
Trigger: CTTGGCAGAAGCTTTTAGGGTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCACTGCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 90 bp AGAATGACAAGTTCAGCTCCTTTAGCTTGGGCAGGCCGCCGCGGATaGCATCTGCAATGGCAACTGCACCCTTGGAGCGCACCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: RMTSSAPLAWAGRRG*HLQWQLHPWSAPGS
Trigger: ACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTGTCATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CCA 90 bp GCCGCAGCTGGACACCCAGCAACACCATGTGAGCTGCCCATTTCCTaGGCCCCTTCAGTGAATGGCAGTCAAGTCCCAAACCAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: AAAGHPATPCELPIS*APSVNGSQVPNQRL
Trigger: CAGCCTTTGGTTTGGGACTTGACTGCCATTCACTGAAGGGGCCCAGGAAATGGGCAGCTCACATGGTGTTGCTGGGTGTCCAGCTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CAA 90 bp GCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTTTGAGGCTCTTGCCTTaGAAACTCAGCTGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: AEISRAPSGGGEFNGGAALRLLP*KLSCPP
Trigger: CGGGGGACAGCTGAGTTTCAAAGGCAAGAGCCTCAA...AGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCATTGAGTTTGAGGCTCTaGCCTTTGAAACTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GPRVALCQQPHDPTPTVPLSLRL*PLKLSC
Trigger: ACAGCTGAGTTTCAAAGGCAAGAGCCTCAAACTCAA...TGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATTCCACGCCCACTGTGTaGCCTTCCAGACGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDSTPTV*PSRRRA
Trigger: GGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGA...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTCGGGCCCGAATGCGTaGTCGCTTAAGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PMAFSALQAERSAQWYGWSGPNA*SLKSSS
Trigger: GGAGCTGGACTTAAGCGACAACGCATTCGGGCCCGA...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCAGCAGCTCCTGCTCCTGGACAATCTGGTGTCTGCCTGTCCACACGGTGTGGGATGCCCATGCCACAGTaGTTGAGCTTGAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PAAPAPGQSGVCLSTRCGMPMPQ*LSLSSC
Trigger: GCAGGAACTCAAGCTCAACAACTGTGGCATGGGCAT...CCCACACCGTGTGGACAGGCAGACACCAGATTGTCCAGGAGCAGGAGCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CAGGCGGAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGTGATGCCAGGGTGGTaGATCCCATTCTGTGGCATG +
Preference number: 5 (lower is better)
Translates to: QAEISRAPSGGGEFNGGAVMPGW*IPFCGM
Trigger: CATGCCACAGAATGGGATCAACCACCCTGGCATCAC...TGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCTGGTGATGCCAGGGTGGTaGATCCCATTCTGTGGCATG +
Preference number: 5 (lower is better)
Translates to: PNHNTEGKDSTRATPWVLVMPGW*IPFCGM
Trigger: CATGCCACAGAATGGGATCAACCACCCTGGCATCAC...CAGAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACTTCTCAGTGAAGGTGTaGTCATTCAGGTTGATGACC +
Preference number: 5 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHFSVKV*SFRLMT
Trigger: GGTCATCAACCTGAATGACAACACCTTCACTGAGAA...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGTCACGGGTGCTCAGGGAGGTCATACAGCATCTGCCCAGTCCAGACCCTACCGTCTTCTCCCAGGGTGTaGCCATTCAGGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SHGCSGRSYSICPVQTLPSSPRV*PFRSSF
Trigger: GAAGCTGGACCTGAATGGCAACACCCTGGGAGAAGA...CGGTAGGGTCTGGACTGGGCAGATGCTGTATGACCTCCCTGAGCACCCGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTTCTTCTCCCAGGGTGTaGCCATTCAGGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLSSPRV*PFRSSF
Trigger: GAAGCTGGACCTGAATGGCAACACCCTGGGAGAAGA...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGCAGCGTCCAGATGCAGCTCGGACATTGGGGACCCTGCCTCTCCCTCCCCAGATTGAAGGACGAGGAGTaGAAAGCCTTCTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: SSVQMQLGHWGPCLSLPRLKDEE*KAFCIR
Trigger: CCTGATGCAGAAGGCTTTCAACTCCTCGTCCTTCAA...TCTGGGGAGGGAGAGGCAGGGTCCCCAATGTCCGAGCTGCATCTGGACGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGATTCCAGGGCGCTGTaGGGCTTGGTCACGAACGCC +
Preference number: 5 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDDSRAL*GLVTNA
Trigger: GGCGTTCGTGACCAAGCCCAACAGCGCCCTGGAATC...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCGGGATGGGAGAGGCTTaGAGTCTAGACCTTGTACAG +
Preference number: 5 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPGMGEA*SLDLVQ
Trigger: CTGTACAAGGTCTAGACTCAAAGCCTCTCCCATCCC...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCCAAGCACACACCTGCTaGAGCATCTTGGCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPQAHTC*SILAVL
Trigger: GAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTG...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS TCA 90 bp ACCCAGCAACACCATGTGAGCTGCCCATTTCCTGGGCCCCTTCAGTaGATGGCAGTCAAGTCCCAAACCAAAGGCTGCAGAGTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: TQQHHVSCPFPGPLQ*MAVKSQTKGCRVWP
Trigger: GGGCCAGACTCTGCAGCCTTTGGTTTGGGACTTGACTGCCATTCACTGAAGGGGCCCAGGAAATGGGCAGCTCACATGGTGTTGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS TCA 90 bp CCTCCTCTGCTAAACTGCCGCAGCTGGACACCCAGCAACACCATGTaGGCTGCCCATTTCCTGGGCCCCTTCAGTGAATGGCAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: PPLLNCRSWTPSNTM*AAHFLGPFSEWQSS
Trigger: ACTTGACTGCCATTCACTGAAGGGGCCCAGGAAATGGGCAGCTCACATGGTGTTGCTGGGTGTCCAGCTGCGGCAGTTTAGCAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CAA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAAGTGTCTCTGCCAGCTaGGCAATGTCTTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTSVSAS*AMSSEA
Trigger: GGCCTCGGAAGACATTGCCAAGCTGGCAGAGACACT...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGATGCCCATGCCACAGTaGTTGAGCTTGAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGGGEFNGGAAHSPFPWGMPMPQ*LSLSSC
Trigger: GCAGGAACTCAAGCTCAACAACTGTGGCATGGGCAT...CCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGGTGTTGTCATTCAGGTaGATGACCCGCAGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PMAFSALQAERSAQWYGWVLSFR*MTRSRG
Trigger: CCCCCTGCTGCGGGTCATCAACCTGAATGACAACAC...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGAGGGGGCCGTACAGGTaGGCAATGGCCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRRGPYR*AMALTL
Trigger: CAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCT...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GTCAGCACAGTGGTATGGATGGTAGGGGTGACAGCTGCCGCAGGACCAGGGCTTGGGATGGGAGAGGCTTaGAGTCTAGACCTTGTACAG +
Preference number: 5 (lower is better)
Translates to: VSTVVWMVGVTAAAGPGLGMGEA*SLDLVQ
Trigger: CTGTACAAGGTCTAGACTCAAAGCCTCTCCCATCCC...AAGCCCTGGTCCTGCGGCAGCTGTCACCCCTACCATCCATACCACTGTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACGACTGGAGAACAGCTTaGGGTTGTCAACACTCCCCC +
Preference number: 5 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHDWRTA*GCQHSP
Trigger: GGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTC...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS GCA 90 bp CCTCTCCCCGCTCCGCAGCAACGTCAGAGACTTTCTGAGGTGAGATaGATGCTCCTGCAAAGCGTCAGCAGTGACTCACATCGATTCCAG +
Preference number: 5 (lower is better)
Translates to: PLPAPQQRQRLSEVR*MLLQSVSSDSHRFQ
Trigger: CTGGAATCGATGTGAGTCACTGCTGACGCTTTGCAGGAGCATGCATCTCACCTCAGAAAGTCTCTGACGTTGCTGCGGAGCGGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422838.1
CDS-3UTR CAA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGTTCTCAGTGAAGGTGTaGTCATTCAGGTTGATGACC +
Preference number: 5 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKFSVKV*SFRLMT
Trigger: GGTCATCAACCTGAATGACAACACCTTCACTGAGAA...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TCCCCAGACTGGAGAACAGCTTTGGGTTGTCAACACTCCCCCTCCAGCCAGGCCTTGAAGGACGAGGAGTaGAAAGCCTTCTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: SPDWRTALGCQHSPSSQALKDEE*KAFCIR
Trigger: CCTGATGCAGAAGGCTTTCAACTCCTCGTCCTTCAA...GGCCTGGCTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTCTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTTCACCTTGTCTTCACTCTaGAGCAGACCCATGTGCACG +
Preference number: 5 (lower is better)
Translates to: NPITTQRGRTARGQLPGFTLSSL*SRPMCT
Trigger: CGTGCACATGGGTCTGCTCAAGAGTGAAGACAAGGT...GAACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACACCTTGTCTTCACTCTaGAGCAGACCCATGTGCACG +
Preference number: 5 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHTLSSL*SRPMCT
Trigger: CGTGCACATGGGTCTGCTCAAGAGTGAAGACAAGGT...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGCCCAGGGTTGCCCTCTGCCAACAACCCCACGATCCGACCCCCACAGTCCCACTGGGTAGAAATGGGGTaGATAAGCCTCACTATTTAT +
Preference number: 5 (lower is better)
Translates to: GPGLPSANNPTIRPPQSHWVEMG*ISLTIY
Trigger: ATAAATAGTGAGGCTTATCAACCCCATTTCTACCCA...GTGGGACTGTGGGGGTCGGATCGTGGGGTTGTTGGCAGAGGGCAACCCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS TCA 90 bp AGTTTGAGGCTCTTGCCTTTGAAACTCAGCTGTCCCCCGGCCACCTaGGTCTTGGCAAGTGTCTCTGCCAGCTTGGCAATGTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: SLRLLPLKLSCPPAT*VLASVSASLAMSSE
Trigger: CTCGGAAGACATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGAGTTTCAAAGGCAAGAGCCTCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000422838.1
ENST00000452543.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGTTGAGGCTCTTGCCTTaGAAACTCAGCTGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRLRLLP*KLSCPP
Trigger: CGGGGGACAGCTGAGTTTCAAAGGCAAGAGCCTCAA...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTGCATCTTCTGCAGTGTaGAGTTTGAGGCTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGASSAV*SLRLLP
Trigger: AGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGC...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATTTCTTCTCTAAGGCCTaGGCGATGACCCTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDFFSKA*AMTLAA
Trigger: AGCAGCCAGGGTCATCGCCAAGGCCTTAGAGAAGAA...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GGTGAGTTTAATGGCGGAGCAGCTCACAGCCCTTTCCCCTGGGGGCCAACTCCCACAGTAGCTTCGTCCTaGAACACAGATGACACCTTT +
Preference number: 5 (lower is better)
Translates to: GEFNGGAAHSPFPWGPTPTVASS*NTDDTF
Trigger: AAAGGTGTCATCTGTGTTCAAGGACGAAGCTACTGT...GGGAGTTGGCCCCCAGGGGAAAGGGCTGTGAGCTGCTCCGCCATTAAACTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GAGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGGTTGGCAATGGCCTaGACCTTGTCTTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: EISRAPSGGGEFNGGAAHRLAMA*TLSSLL
Trigger: CAAGAGTGAAGACAAGGTCAAGGCCATTGCCAACCT...GTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTAGGTTGGCAATGGCCTaGACCTTGTCTTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGRLAMA*TLSSLL
Trigger: CAAGAGTGAAGACAAGGTCAAGGCCATTGCCAACCT...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGGGATGGGAGAGGCTTaGAGTCTAGACCTTGTACAG +
Preference number: 5 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTGMGEA*SLDLVQ
Trigger: CTGTACAAGGTCTAGACTCAAAGCCTCTCCCATCCC...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGACTGGAGAACAGCTTaGGGTTGTCAACACTCCCCC +
Preference number: 5 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRDWRTA*GCQHSP
Trigger: GGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGACTGGAGAACAGCTTaGGGTTGTCAACACTCCCCC +
Preference number: 5 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDDWRTA*GCQHSP
Trigger: GGGGGAGTGTTGACAACCCAAAGCTGTTCTCCAGTC...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCAACTCCCTGGGTACCTGCTTGAGCATCTaGGCTGTTCTCTGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: TTQSQHRGEGQHAGNSLGTCLSI*AVLCLR
Trigger: CCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGT...ACCCAGGGAGTTGCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS TCA 90 bp AACATCCTCTCCCCGCTCCGCAGCAACGTCAGAGACTTTCTGAGGTaGGATGCATGCTCCTGCAAAGCGTCAGCAGTGACTCACATCGAT +
Preference number: 5 (lower is better)
Translates to: NILSPLRSNVRDFLR*DACSCKASAVTHID
Trigger: ATCGATGTGAGTCACTGCTGACGCTTTGCAGGAGCATGCATCTCACCTCAGAAAGTCTCTGACGTTGCTGCGGAGCGGGGAGAGGATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422838.1
CDS GCA 90 bp CAAGTCCCAAACCAAAGGCTGCAGAGTCTGGCCCAAGCACACACCTaGTTGAGCATCTTGGCTGTTCTCTGTTTGAGGGTCCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: QVPNQRLQSLAQAHT*LSILAVLCLRVPFL
Trigger: GAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGCCAGACTCTGCAGCCTTTGGTTTGGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS-3UTR CAA 90 bp GCAGGGCAGGAAACAACCCAATCACAACACAGAGGGGAAGGACAGCACGCGGGCACAGTAGCTTCGTCCTaGAACACAGATGACACCTTT +
Preference number: 5 (lower is better)
Translates to: AGQETTQSQHRGEGQHAGTVASS*NTDDTF
Trigger: AAAGGTGTCATCTGTGTTCAAGGACGAAGCTACTGT...GCCCGCGTGCTGTCCTTCCCCTCTGTGTTGTGATTGGGTTGTTTCCTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GACGTTAAAACCCAAATCCCGACAGGAGGCACAGACCTGCACATGCGCCACACCTTGAAGGACGAGGAGTaGAAAGCCTTCTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: DVKTQIPTGGTDLHMRHTLKDEE*KAFCIR
Trigger: CCTGATGCAGAAGGCTTTCAACTCCTCGTCCTTCAA...GGTGTGGCGCATGTGCAGGTCTGTGCCTCCTGTCGGGATTTGGGTTTTAACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGGCAATGGCCTTGACCTaGTCTTCACTCTTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: PMAFSALQAERSAQWYGWAMALT*SSLLSR
Trigger: TCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATTGC...CCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AGATCAGCAGAGCGCCCTCAGGTGGAGGTGAGTTTAATGGCGGAGCAGCTCACAGCAATGGCCTTGACCTaGTCTTCACTCTTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RSAERPQVEVSLMAEQLTAMALT*SSLLSR
Trigger: TCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATTGC...TGTGAGCTGCTCCGCCATTAAACTCACCTCCACCTGAGGGCGCTCTGCTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp ACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTGCCCTCTAAGAAAGATTCCAGGGCGCTGTaGGGCTTGGTCACGAACGCC +
Preference number: 5 (lower is better)
Translates to: TWSPTWPTANEKILPSKKDSRAL*GLVTNA
Trigger: GGCGTTCGTGACCAAGCCCAACAGCGCCCTGGAATC...TTTCTTAGAGGGCAATATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GCAGGAAAATGGGCCCCCACTCAGGACTGCCACTTCCCAGGTAGTGGCCTGAGGGCCAATGAGAAAATATaGCCCTCTAAGAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: AGKWAPTQDCHFPGSGLRANEKI*PSKKPW
Trigger: CCAAGGTTTCTTAGAGGGCAATATTTTCTCATTGGC...CCTCAGGCCACTACCTGGGAAGTGGCAGTCCTGAGTGGGGGCCCATTTTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp AGGCTGCGCCTCAGTTCATCCGAGTCCCTCCCCAGCTCACTGGTCCAGGCCAAGGCAACCTCTACCTTCTaGTCTCTGAATTTGCTTATT +
Preference number: 5 (lower is better)
Translates to: RLRLSSSESLPSSLVQAKATSTF*SLNLLI
Trigger: AATAAGCAAATTCAGAGACAAGAAGGTAGAGGTTGC...CTTGGCCTGGACCAGTGAGCTGGGGAGGGACTCGGATGAACTGAGGCGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS CCA 90 bp CTGGTGGGCTCCCCTGGAGATCTGCAGACTGTAATTCCAACATTTTaGGAGGCTAGGCGGGAAGATCACTTTAGACCAGGGTTCGAGACA +
Preference number: 5 (lower is better)
Translates to: LVGSPGDLQTVIPTF*EARREDHFRPGFET
Trigger: TGTCTCGAACCCTGGTCTAAAGTGATCTTCCCGCCTAGCCTCCCAAAATGTTGGAATTACAGTCTGCAGATCTCCAGGGGAGCCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405486.5
ENST00000422838.1
CDS CCA 90 bp TCTCTGTTTGAGGGTCCCATTCCTCAAACAGGACACAGATGGCTATaGGATCCAGATCATTCATCCCAGAGAATGCCCCACCACCCACGC +
Preference number: 5 (lower is better)
Translates to: SLFEGPIPQTGHRWL*DPDHSSQRMPHHPR
Trigger: GCGTGGGTGGTGGGGCATTCTCTGGGATGAATGATCTGGATCCCATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS-3UTR CAA 90 bp TGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATGGTAGGGCATCTTCTGCAGTGTaGAGTTTGAGGCTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: WHSLLFRLSGQHSGMDGRASSAV*SLRLLP
Trigger: AGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGC...CCTACCATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp GAGACTATCCCGCTTTCAGTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACTTCTCCAGCTCAGCTTaGTCTGCCATGGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ETIPLSVRVSESLKLPHDFSSSA*SAMASA
Trigger: TGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAA...GTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAAAGCGGGATAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GCAGTATCCTCTGCCACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATAACCTTGTCTTCACTCTaGAGCAGACCCATGTGCACG +
Preference number: 5 (lower is better)
Translates to: AVSSATWSPTWPTANEKITLSSL*SRPMCT
Trigger: CGTGCACATGGGTCTGCTCAAGAGTGAAGACAAGGT...TATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS CCA 90 bp GGCTGTTCTCTGTTTGAGGGTCCCATTCCTCAAACAGGACACAGATaGCTATGGGATCCAGATCATTCATCCCAGAGAATGCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: GCSLFEGPIPQTGHR*LWDPDHSSQRMPHH
Trigger: GTGGTGGGGCATTCTCTGGGATGAATGATCTGGATCCCATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AATGAGAAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTAGGGACGCCAGCACCTaGGCCATGTTGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: NEKILPSKKPWRDFLEAVRDAST*AMLKPS
Trigger: GGAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCT...AACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTTCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATTCTGCAGTGTTGAGTTaGAGGCTCTTGCCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDSAVLS*RLLPLK
Trigger: TTTCAAAGGCAAGAGCCTCAAACTCAACACTGCAGA...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp CACCCATGGCATTCTCTGCTCTTCAGGCTGAGCGGTCAGCACAGTGGTATGGATTTCTCAGTGAAGGTGTaGTCATTCAGGTTGATGACC +
Preference number: 5 (lower is better)
Translates to: HPWHSLLFRLSGQHSGMDFSVKV*SFRLMT
Trigger: GGTCATCAACCTGAATGACAACACCTTCACTGAGAA...ATCCATACCACTGTGCTGACCGCTCAGCCTGAAGAGCAGAGAATGCCATGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS-3UTR CAA 90 bp AAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTTGTGGGGAGAACAGCTTTGGGTaGTCAACACTCCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: KILPSKKPWRDFLEAVCGENSFG*STLPLQ
Trigger: CTGGAGGGGGAGTGTTGACAACCCAAAGCTGTTCTC...CCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GCAGTATCCTCTGCCACCTGGTCACCTACGTGGCCGACTGCCAATGAGAAAATATTGAGTTTGAGGCTCTaGCCTTTGAAACTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: AVSSATWSPTWPTANEKILSLRL*PLKLSC
Trigger: ACAGCTGAGTTTCAAAGGCAAGAGCCTCAAACTCAA...TATTTTCTCATTGGCAGTCGGCCACGTAGGTGACCAGGTGGCAGAGGATACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp ATTCACAATGTTATGCAACCATCACCACTCTCCATTTCCAGAACATCTTCATCAGCTGCAGCCAGGATCTaGCCGCCGCCAATGCCCATG +
Preference number: 5 (lower is better)
Translates to: IHNVMQPSPLSISRTSSSAAARI*PPPMPM
Trigger: CATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGC...TGATGAAGATGTTCTGGAAATGGAGAGTGGTGATGGTTGCATAACATTGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GAGACTATCCCGCTTTCAGTGAGAGTTTCTGAGTCTCTGAAGCTGCCACACGACTCTGCAGTGTTGAGTTaGAGGCTCTTGCCTTTGAAA +
Preference number: 5 (lower is better)
Translates to: ETIPLSVRVSESLKLPHDSAVLS*RLLPLK
Trigger: TTTCAAAGGCAAGAGCCTCAAACTCAACACTGCAGA...GTCGTGTGGCAGCTTCAGAGACTCAGAAACTCTCACTGAAAGCGGGATAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp AAAATATTGCCCTCTAAGAAACCTTGGAGGGACTTCTTGGAGGCCGTTTGTGGGGCATCTTCTGCAGTGTaGAGTTTGAGGCTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: KILPSKKPWRDFLEAVCGASSAV*SLRLLP
Trigger: AGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGC...CCCACAAACGGCCTCCAAGAAGTCCCTCCAAGGTTTCTTAGAGGGCAATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp CATCACCACTCTCCATTTCCAGAACATCTTCATCATCCCAGAGAATCTGTTTGCTTCTTCTCTAAGGCCTaGGCGATGACCCTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HHHSPFPEHLHHPRESVCFFSKA*AMTLAA
Trigger: AGCAGCCAGGGTCATCGCCAAGGCCTTAGAGAAGAA...GCAAACAGATTCTCTGGGATGATGAAGATGTTCTGGAAATGGAGAGTGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp GTTTTCAAAGTTCATCCACGTTGTAGCTGGCATCAGAACTTAATGCCAGCCCCACCACAGTTGTTGAGCTaGAGTTCCTGCAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VFKVHPRCSWHQNLMPAPPQLLS*SSCRVK
Trigger: CTTCACCCTGCAGGAACTCAAGCTCAACAACTGTGG...TGGGGCTGGCATTAAGTTCTGATGCCAGCTACAACGTGGATGAACTTTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp CATCACCACTCTCCATTTCCAGAACATCTTCATCATCCCAGAGAATCTGTTTGCCCCATGCCACAGTTGTaGAGCTTGAGTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: HHHSPFPEHLHHPRESVCPMPQL*SLSSCR
Trigger: CCTGCAGGAACTCAAGCTCAACAACTGTGGCATGGG...GCAAACAGATTCTCTGGGATGATGAAGATGTTCTGGAAATGGAGAGTGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp CTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCTTATTTTCTTCTCCCAGGGTGTaGCCATTCAGGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LDASSKWNHICPFVSGLFSSPRV*PFRSSF
Trigger: GAAGCTGGACCTGAATGGCAACACCCTGGGAGAAGA...AAATAAGCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp ATTCACAATGTTATGCAACCATCACCACTCTCCATTTCCAGAACATCTTCATCAACAGTAGCTTCGTCCTaGAACACAGATGACACCTTT +
Preference number: 5 (lower is better)
Translates to: IHNVMQPSPLSISRTSSSTVASS*NTDDTF
Trigger: AAAGGTGTCATCTGTGTTCAAGGACGAAGCTACTGT...TGATGAAGATGTTCTGGAAATGGAGAGTGGTGATGGTTGCATAACATTGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS-3UTR CAA 90 bp CTAGATGCCTCATCTAAATGGAATCATATTTGTCCTTTTGTGTCTGGCTTATTTAGGAAGGTGTTGGAGTaGAAGGACGAGGAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LDASSKWNHICPFVSGLFRKVLE*KDEELK
Trigger: TTTCAACTCCTCGTCCTTCAACTCCAACACCTTCCT...AAATAAGCCAGACACAAAAGGACAAATATGATTCCATTTAGATGAGGCATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356244.8
CDS GCA 72 bp GGCCCCCGCGGGCGTGGGCCTGCTGGGAGGTGGCTCTaGGGGAGCGACGCGCGAATACAGGCCGCAAATGAT +
Preference number: 6 (lower is better)
Translates to: GPRGRGPAGRWL*GSDARIQAAND
Trigger: ATCATTTGCGGCCTGTATTCGCGCGTCGCTCCCGCAGAGCCACCTCCCAGCAGGCCCACGCCCGCGGGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405486.5
ENST00000422838.1
CDS CCA 72 bp TTAGCTTGGGCAGGCCGCCGCGGATGGCATCTGCAATaGCAACTGCACCCTTGGAGCGCACCAGGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: LAWAGRRGWHLQ*QLHPWSAPGSP
Trigger: GGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGCCCAAGCTAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS GCA 72 bp GGGCAGGCCGCCGCGGATGGCATCTGCAATGGCAACTaGACCCTTGGAGCGCACCAGGCAGTCCCCAAAATT +
Preference number: 6 (lower is better)
Translates to: GQAAADGICNGN*TLGAHQAVPKI
Trigger: AATTTTGGGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CAA 90 bp GCCATGGCCACGGCGCCCTTCTCAGTGAAGGTGTTGTCATTCAGGTaGATGACCCGCAGCAGGGGGTTGACAGCGAAAGCCTGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: AMATAPFSVKVLSFR*MTRSRGLTAKAWAR
Trigger: CCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGACAACACCTTCACTGAGAAGGGCGCCGTGGCCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS TCA 72 bp TCAGGGCTGGTGGGATCTCGGTCCGCAGCCTTCCCGTaGACATGTCACTCCAGTGGCAGCGCTTCAACTCCG +
Preference number: 6 (lower is better)
Translates to: SGLVGSRSAAFP*TCHSSGSASTP
Trigger: CGGAGTTGAAGCGCTGCCACTGGAGTGACATGTTCACGGGAAGGCTGCGGACCGAGATCCCACCAGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000452543.5
ENST00000455915.6
CDS TCA 72 bp GAGGGCGTGGCTGACTTCTCTCCCTGCCCTCGCTGCTaGGGCTCTTCTTCCTCCTCCTCCTCCTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: EGVADFSPCPRC*GSSSSSSSSSS
Trigger: GGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAGCGAGGGCAGGGAGAGAAGTCAGCCACGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 72 bp CCACTGCACGTCTGGTTTCAACCGTGGCCGGGAGACTaGGCAGGCCACAATGGCCCCTCAGGGGTTTCTAGA +
Preference number: 6 (lower is better)
Translates to: PLHVWFQPWPGD*AGHNGPSGVSR
Trigger: TCTAGAAACCCCTGAGGGGCCATTGTGGCCTGCCCAGTCTCCCGGCCACGGTTGAAACCAGACGTGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 72 bp GCGAAAGCCTGGGCCAGGGCAGTGATGCCAGGGTGGTaGATCCCATTCTGTGGCATGTGGACCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: AKAWARAVMPGW*IPFCGMWTSSR
Trigger: CCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCACTGCCCTGGCCCAGGCTTTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CAA 72 bp GACGTGTCAGTCTGCTGGGCTATCAGCACGGAGCTCTaGGGCCCTAGGCGCAGCAGCTTCTCTGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: DVSVCWAISTEL*GPRRSSFSGEG
Trigger: TCCCTCTCCAGAGAAGCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CAA 90 bp TTGGGCAGGCCGCCGCGGATGGCATCTGCAATGGCAACTGCACCCTaGGAGCGCACCAGGCAGTCCCCAAAATTAATCACCTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: LGRPPRMASAMATAP*ERTRQSPKLITSTC
Trigger: GCAGGTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS GCA 72 bp AAGCAGGCTGAGCTCTTGAGCAGGGCCTCGAAGCCTTaGACACCGTCGGGCCCGAATGCGTTGTCGCTTAAG +
Preference number: 6 (lower is better)
Translates to: KQAELLSRASKP*TPSGPNALSLK
Trigger: CTTAAGCGACAACGCATTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS GCA 72 bp TTGGGCACTGGATTTCCGGTGACATTCGGTCAGAGCTaGAGCCAGGATCTTGCCGCCGCCAATGCCCATGCC +
Preference number: 6 (lower is better)
Translates to: LGTGFPVTFGQS*SQDLAAANAHA
Trigger: GGCATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGCTCTGACCGAATGTCACCGGAAATCCAGTGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS GCA 72 bp AGGTGGGAGGATCGCTTGAGCCCAGGAAGCCGACGCTaGAGTTCAGCGGTGATCGTTCCACTACACTCCAGC +
Preference number: 6 (lower is better)
Translates to: RWEDRLSPGSRR*SSAVIVPLHSS
Trigger: GCTGGAGTGTAGTGGAACGATCACCGCTGAACTGCAGCGTCGGCTTCCTGGGCTCAAGCGATCCTCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405486.5
ENST00000422838.1
CDS CCA 72 bp CAGGGCAGTGATGCCAGGGTGGTTGATCCCATTCTGTaGCATGTGGACCTCCTCCAGGGTCCCGATGACCCT +
Preference number: 6 (lower is better)
Translates to: QGSDARVVDPIL*HVDLLQGPDDP
Trigger: AGGGTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCACTGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 72 bp ACAGCGAAAGCCTGGGCCAGGGCAGTGATGCCAGGGTaGTTGATCCCATTCTGTGGCATGTGGACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TAKAWARAVMPG*LIPFCGMWTSS
Trigger: GGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCACTGCCCTGGCCCAGGCTTTCGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CCA 72 bp AGTTCAGCTCCTTTAGCTTGGGCAGGCCGCCGCGGATaGCATCTGCAATGGCAACTGCACCCTTGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: SSAPLAWAGRRG*HLQWQLHPWSA
Trigger: TGCGCTCCAAGGGTGCAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CCA 72 bp ACGTGTCAGTCTGCTGGGCTATCAGCACGGAGCTCTTaGGCCCTAGGCGCAGCAGCTTCTCTGGAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: TCQSAGLSARSS*ALGAAASLERE
Trigger: TTCCCTCTCCAGAGAAGCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 72 bp TGGTCACGAACGCCAGCAGCAGGGGTGCAAGGGCCTTaGGGAAATAGTCCTGCTGCACCATGTGGTTCAGCG +
Preference number: 6 (lower is better)
Translates to: WSRTPAAGVQGP*GNSPAAPCGSA
Trigger: CGCTGAACCACATGGTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTGGCGTTCGTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CAA 72 bp TCGGCCATGGCCACGGCGCCCTTCTCAGTGAAGGTGTaGTCATTCAGGTTGATGACCCGCAGCAGGGGGTTG +
Preference number: 6 (lower is better)
Translates to: SAMATAPFSVKV*SFRLMTRSRGL
Trigger: CAACCCCCTGCTGCGGGTCATCAACCTGAATGACAACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS GCA 72 bp CTGTCCCCCGGCCACCTGAGTCTTGGCAAGTGTCTCTaGCAGCTTGGCAATGTCTTCCGAGGCCATGTTGAC +
Preference number: 6 (lower is better)
Translates to: LSPGHLSLGKCL*QLGNVFRGHVD
Trigger: GTCAACATGGCCTCGGAAGACATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000422838.1
ENST00000452543.5
ENST00000455915.6
CDS GCA 72 bp CCAAGGCAGTGGCGCCATCATTCTCCAGACGGTTTCTaGCAGCCACAAAGACCTTCAGGGCCAGAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: PRQWRHHSPDGF*QPQRPSGPEAC
Trigger: GCAAGCCTCTGGCCCTGAAGGTCTTTGTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS GCA 72 bp CGCACCAGGCAGTCCCCAAAATTAATCACCTCCACCTaGCGCAAGGTCTTCAAGGTCTCGGCCATGGCCACG +
Preference number: 6 (lower is better)
Translates to: RTRQSPKLITST*RKVFKVSAMAT
Trigger: CGTGGCCATGGCCGAGACCTTGAAGACCTTGCGGCAGGTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CCA 72 bp CAGGGCAGTGATGCCAGGGTGGTTGATCCCATTCTGTaGCATGTGGACCTCCTCCAGGGTCCCGATGACCTT +
Preference number: 6 (lower is better)
Translates to: QGSDARVVDPIL*HVDLLQGPDDL
Trigger: AAGGTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCACTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446258.5
CDS CAA 72 bp GTCTCTGCCAGCTTGGCAATGTCTTCCGAGGCCATGTaGACTAGGCTGGTGGGCTCCCCTGGAGATCTGCAG +
Preference number: 6 (lower is better)
Translates to: VSASLAMSSEAM*TRLVGSPGDLQ
Trigger: CTGCAGATCTCCAGGGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGACATTGCCAAGCTGGCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000422838.1
ENST00000452543.5
ENST00000455915.6
CDS CAA 72 bp TTGGCGATGACCCTGGCTGCTTCCACGCCCACTGTGTaGCCTTCCAGACGCAGAGCCTCCAAGCTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: LAMTLAASTPTV*PSRRRASKLSK
Trigger: CTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS CAA 72 bp GTGTTGTCATTCAGGTTGATGACCCGCAGCAGGGGGTaGACAGCGAAAGCCTGGGCCAGGGCAGTGATGCCA +
Preference number: 6 (lower is better)
Translates to: VLSFRLMTRSRG*TAKAWARAVMP
Trigger: TGGCATCACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGACAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CAA 90 bp TCACTCCAGTGGCAGCGCTTCAACTCCGACTTCTTCTCTAAGGCCTaGGCGATGACCCTGGCTGCTTCCACGCCCACTGTGTTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: SLQWQRFNSDFFSKA*AMTLAASTPTVLPS
Trigger: GGAAGGCAACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACTGGAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS CAA 90 bp TCAGTGAAGGTGTTGTCATTCAGGTTGATGACCCGCAGCAGGGGGTaGACAGCGAAAGCCTGGGCCAGGGCAGTGATGCCAGGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SVKVLSFRLMTRSRG*TAKAWARAVMPGWL
Trigger: CAACCACCCTGGCATCACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGACAACACCTTCACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CAA 90 bp TTCAAGGTCTCGGCCATGGCCACGGCGCCCTTCTCAGTGAAGGTGTaGTCATTCAGGTTGATGACCCGCAGCAGGGGGTTGACAGCGAAA +
Preference number: 6 (lower is better)
Translates to: FKVSAMATAPFSVKV*SFRLMTRSRGLTAK
Trigger: TTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGACAACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CAA 90 bp TTGGCAAGTGTCTCTGCCAGCTTGGCAATGTCTTCCGAGGCCATGTaGACTAGGCTGGTGGGCTCCCCTGGAGATCTGCAGACTGAGGAG +
Preference number: 6 (lower is better)
Translates to: LASVSASLAMSSEAM*TRLVGSPGDLQTEE
Trigger: CTCCTCAGTCTGCAGATCTCCAGGGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGACATTGCCAAGCTGGCAGAGACACTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418067.1
ENST00000455915.6
CDS TCA 72 bp TGGGGGCAGGGTAGGACATCAGCCATCTCAGGAGTCTaGCCCTACCTCCCCTGCTATGGAGACCCTAGAGAT +
Preference number: 6 (lower is better)
Translates to: WGQGRTSAISGV*PYLPCYGDPRD
Trigger: ATCTCTAGGGTCTCCATAGCAGGGGAGGTAGGGTCAGACTCCTGAGATGGCTGATGTCCTACCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418067.1
ENST00000455915.6
CDS TCA 72 bp TCCTCTCCCCGCTCCGCAGCAACGTCAGAGACTTTCTaGGGTGAGATGCATGCTCCTGCAAAGCGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SSPRSAATSETF*GEMHAPAKRQQ
Trigger: CTGCTGACGCTTTGCAGGAGCATGCATCTCACCTCAGAAAGTCTCTGACGTTGCTGCGGAGCGGGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422838.1
CDS CCA 72 bp CAAAGACCTTCAGGGCCAGAGGCTTGCCTTGGGCACTaGATTTCCGGTGACATTCGGTCAGAGCTGCAGCCA +
Preference number: 6 (lower is better)
Translates to: QRPSGPEACLGH*ISGDIRSELQP
Trigger: TGGCTGCAGCTCTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CAA 72 bp ACGGCGCCCTTCTCAGTGAAGGTGTTGTCATTCAGGTaGATGACCCGCAGCAGGGGGTTGACAGCGAAAGCC +
Preference number: 6 (lower is better)
Translates to: TAPFSVKVLSFR*MTRSRGLTAKA
Trigger: GGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGACAACACCTTCACTGAGAAGGGCGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000446258.5
ENST00000455915.6
CDS CAA 72 bp AGCGCCATCAGGGGGCCGTACAGGTTGGCAATGGCCTaGACCTTGTCTTCACTCTTGAGCAGACCCATGTGC +
Preference number: 6 (lower is better)
Translates to: SAIRGPYRLAMA*TLSSLLSRPMC
Trigger: GCACATGGGTCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATGGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS TCA 72 bp CTCTTGCCTTTGAAACTCAGCTGTCCCCCGGCCACCTaGGTCTTGGCAAGTGTCTCTGCCAGCTTGGCAATG +
Preference number: 6 (lower is better)
Translates to: LLPLKLSCPPAT*VLASVSASLAM
Trigger: CATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGAGTTTCAAAGGCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000422838.1
ENST00000452543.5
ENST00000455915.6
CDS TCA 72 bp GCTTCAACTCCGACTTCTTCTCTAAGGCCTTGGCGATaGCCCTGGCTGCTTCCACGCCCACTGTGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: ASTPTSSLRPWR*PWLLPRPLCCL
Trigger: AAGGCAACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS TCA 72 bp TCCCCGCTCCGCAGCAACGTCAGAGACTTTCTGAGGTaGGATGCATGCTCCTGCAAAGCGTCAGCAGTGACT +
Preference number: 6 (lower is better)
Translates to: SPLRSNVRDFLR*DACSCKASAVT
Trigger: AGTCACTGCTGACGCTTTGCAGGAGCATGCATCTCACCTCAGAAAGTCTCTGACGTTGCTGCGGAGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422838.1
CDS TCA 72 bp CCCAGCACATTGGGAAGCTGTGATGGGAAGATCGCTTaGGCCCAGCAGCTCAAGACCAGTCTGGGCAACATG +
Preference number: 6 (lower is better)
Translates to: PSTLGSCDGKIA*AQQLKTSLGNM
Trigger: CATGTTGCCCAGACTGGTCTTGAGCTGCTGGGCTCAAGCGATCTTCCCATCACAGCTTCCCAATGTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CCA 72 bp GTGATGCCAGGGTGGTTGATCCCATTCTGTGGCATGTaGACCTCCTCCAGGGTCCCGATGACCCTAAAAGCT +
Preference number: 6 (lower is better)
Translates to: VMPGWLIPFCGM*TSSRVPMTLKA
Trigger: AGCTTTTAGGGTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 72 bp GGACACCCAGCAACACCATGTGAGCTGCCCATTTCCTaGGCCCCTTCAGTGAATGGCAGTCAAGTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: GHPATPCELPIS*APSVNGSQVPN
Trigger: GTTTGGGACTTGACTGCCATTCACTGAAGGGGCCCAGGAAATGGGCAGCTCACATGGTGTTGCTGGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 72 bp ACCATGTGGTTCAGCGCCATCAGGGGGCCGTACAGGTaGGCAATGGCCTTGACCTTGTCTTCACTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: TMWFSAIRGPYR*AMALTLSSLLS
Trigger: GCTCAAGAGTGAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATGGCGCTGAACCACATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS TCA 72 bp CACCATGTGAGCTGCCCATTTCCTGGGCCCCTTCAGTaGATGGCAGTCAAGTCCCAAACCAAAGGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: HHVSCPFPGPLQ*MAVKSQTKGCR
Trigger: TCTGCAGCCTTTGGTTTGGGACTTGACTGCCATTCACTGAAGGGGCCCAGGAAATGGGCAGCTCACATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS GCA 72 bp GCCTTGACCTTGTCTTCACTCTTGAGCAGACCCATGTaGACGAGCAGCCTGGTGAGGAAGGTGTTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: ALTLSSLLSRPM*TSSLVRKVLEL
Trigger: CAACTCCAACACCTTCCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAAGAGTGAAGACAAGGTCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CAA 72 bp CAAAGGCTGCAGAGTCTGGCCCAAGCACACACCTGCTaGAGCATCTTGGCTGTTCTCTGTTTGAGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: QRLQSLAQAHTC*SILAVLCLRVP
Trigger: TGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGCCAGACTCTGCAGCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 90 bp TTGGCAAGTGTCTCTGCCAGCTTGGCAATGTCTTCCGAGGCCATGTaGACTAGGCTGGTGGGCTCCCCTGGAGATCTGCAGACTGTAATT +
Preference number: 6 (lower is better)
Translates to: LASVSASLAMSSEAM*TRLVGSPGDLQTVI
Trigger: AATTACAGTCTGCAGATCTCCAGGGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGACATTGCCAAGCTGGCAGAGACACTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405486.5
ENST00000422838.1
CDS GCA 72 bp GCTCCGCAGCAACGTCAGAGACTTTCTGAGGTGAGATaGATGCTCCTGCAAAGCGTCAGCAGTGACTCACAT +
Preference number: 6 (lower is better)
Translates to: APQQRQRLSEVR*MLLQSVSSDSH
Trigger: ATGTGAGTCACTGCTGACGCTTTGCAGGAGCATGCATCTCACCTCAGAAAGTCTCTGACGTTGCTGCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422838.1
CDS GCA 72 bp AACCAAAGGCTGCAGAGTCTGGCCCAAGCACACACCTaGTTGAGCATCTTGGCTGTTCTCTGTTTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: NQRLQSLAQAHT*LSILAVLCLRV
Trigger: GACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGCCAGACTCTGCAGCCTTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 72 bp ATGTGCACGAGCAGCCTGGTGAGGAAGGTGTTGGAGTaGAAGGACGAGGAGTTGAAAGCCTTCTGCATCAGG +
Preference number: 6 (lower is better)
Translates to: MCTSSLVRKVLE*KDEELKAFCIR
Trigger: CCTGATGCAGAAGGCTTTCAACTCCTCGTCCTTCAACTCCAACACCTTCCTCACCAGGCTGCTCGTGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CAA 90 bp CTGGCCCAAGCACACACCTGCTTGAGCATCTTGGCTGTTCTCTGTTaGAGGGTCCCATTCCTCAAACAGGACACAGATGGCTATGGGATC +
Preference number: 6 (lower is better)
Translates to: LAQAHTCLSILAVLC*RVPFLKQDTDGYGI
Trigger: GATCCCATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 90 bp CAAAGGCTGCAGAGTCTGGCCCAAGCACACACCTGCTTGAGCATCTaGGCTGTTCTCTGTTTGAGGGTCCCATTCCTCAAACAGGACACA +
Preference number: 6 (lower is better)
Translates to: QRLQSLAQAHTCLSI*AVLCLRVPFLKQDT
Trigger: TGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGCCAGACTCTGCAGCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 90 bp GTCCCAAACCAAAGGCTGCAGAGTCTGGCCCAAGCACACACCTGCTaGAGCATCTTGGCTGTTCTCTGTTTGAGGGTCCCATTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: VPNQRLQSLAQAHTC*SILAVLCLRVPFLK
Trigger: TTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGCCAGACTCTGCAGCCTTTGGTTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS GCA 72 bp AGCCTTCTGCATCAGGGCATCTACTGCATCCTGCACTaGCATCCTCACAGTAGCTTCGTCCTTGAACACAGA +
Preference number: 6 (lower is better)
Translates to: SLLHQGIYCILH*HPHSSFVLEHR
Trigger: TCTGTGTTCAAGGACGAAGCTACTGTGAGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS GCA 72 bp GTGTTGGAGTTGAAGGACGAGGAGTTGAAAGCCTTCTaGATCAGGGCATCTACTGCATCCTGCACTGCCATC +
Preference number: 6 (lower is better)
Translates to: VLELKDEELKAF*IRASTASCTAI
Trigger: GATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAGGCTTTCAACTCCTCGTCCTTCAACTCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CCA 72 bp GAGGGTCCCATTCCTCAAACAGGACACAGATGGCTATaGGATCCAGATCATTCATCCCAGAGAATGCCCCAC +
Preference number: 6 (lower is better)
Translates to: EGPIPQTGHRWL*DPDHSSQRMPH
Trigger: GTGGGGCATTCTCTGGGATGAATGATCTGGATCCCATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS CAA 72 bp GCATCCTGCACTGCCATCCTCACAGTAGCTTCGTCCTaGAACACAGATGACACCTTTAGGAAGGCAGAGACC +
Preference number: 6 (lower is better)
Translates to: ASCTAILTVASS*NTDDTFRKAET
Trigger: GGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACTGTGAGGATGGCAGTGCAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CAA 72 bp GCACACACCTGCTTGAGCATCTTGGCTGTTCTCTGTTaGAGGGTCCCATTCCTCAAACAGGACACAGATGGC +
Preference number: 6 (lower is better)
Translates to: AHTCLSILAVLC*RVPFLKQDTDG
Trigger: GCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 72 bp CAGAGTCTGGCCCAAGCACACACCTGCTTGAGCATCTaGGCTGTTCTCTGTTTGAGGGTCCCATTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: QSLAQAHTCLSI*AVLCLRVPFLK
Trigger: TTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGGTGTGTGCTTGGGCCAGACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455915.6
CDS CAA 90 bp GCATCTACTGCATCCTGCACTGCCATCCTCACAGTAGCTTCGTCCTaGAACACAGATGACACCTTTAGGAAGGCAGAGACCACCTTCTCG +
Preference number: 6 (lower is better)
Translates to: ASTASCTAILTVASS*NTDDTFRKAETTFS
Trigger: CGAGAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACTGTGAGGATGGCAGTGCAGGATGCAGTAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356244.8
ENST00000405486.5
ENST00000455915.6
CDS CAA 90 bp CCCTGGAGATCTGCAGACTGCTTGAGCATCTTGGCTGTTCTCTGTTaGAGGGTCCCATTCCTCAAACAGGACACAGATGGCTATGGGATC +
Preference number: 6 (lower is better)
Translates to: PWRSADCLSILAVLC*RVPFLKQDTDGYGI
Trigger: GATCCCATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGTCTGCAGATCTCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452543.5
CDS CAA 72 bp TCTGCAGACTGCTTGAGCATCTTGGCTGTTCTCTGTTaGAGGGTCCCATTCCTCAAACAGGACACAGATGGC +
Preference number: 6 (lower is better)
Translates to: SADCLSILAVLC*RVPFLKQDTDG
Trigger: GCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGTCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452543.5
CDS CCA 72 bp CTGTTTGAGGGTCCCATTCCTCAAACAGGACACAGATaGCTATGGGATCCAGATCATTCATCCCAGAGAATG +
Preference number: 6 (lower is better)
Translates to: LFEGPIPQTGHR*LWDPDHSSQRM
Trigger: CATTCTCTGGGATGAATGATCTGGATCCCATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418067.1
ENST00000452543.5
ENST00000455915.6
CDS CAA 90 bp ACCCTAGAGATAAATCACTGCTTGAGCATCTTGGCTGTTCTCTGTTaGAGGGTCCCATTCCTCAAACAGGACACAGATGGCTATGGGATC +
Preference number: 6 (lower is better)
Translates to: TLEINHCLSILAVLC*RVPFLKQDTDGYGI
Trigger: GATCCCATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGTGATTTATCTCTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418067.1
CDS CAA 72 bp ATAAATCACTGCTTGAGCATCTTGGCTGTTCTCTGTTaGAGGGTCCCATTCCTCAAACAGGACACAGATGGC +
Preference number: 6 (lower is better)
Translates to: INHCLSILAVLC*RVPFLKQDTDG
Trigger: GCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCTCAAGCAGTGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418067.1