Pregenerated sensors for RANBP6 (Homo sapiens)
Ensembl gene IDs: ENSG00000137040Ensembl transcript IDs: ENST00000259569.6
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTAAAGAAATTTAAAAGTTCTCTAACTCTCAACCAGACACCTTaGGAACTACAATATGGATATGTCCTACCCAGTTCCCAGGAGTAC | + |
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Preference number: 1 (lower is better) Translates to: WLKKFKSSLTLNQTP*ELQYGYVLPSSQEY Trigger: GTACTCCTGGGAACTGGGTAGGACATATCCATATTGTAGTTCCCAAGGTGTCTGGTTGAGAGTTAGAGAACTTTTAAATTTCTTTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| 3UTR TCA 90 bp | AACTACAATATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATaGAGAAGTTCATATACATCCCACATCCACTGCAGTATCTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: NYNMDMSYPVPRSTL*RSSYTSHIHCSISK Trigger: TTTTGAGATACTGCAGTGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCATATTGTAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| 3UTR-3UTR TCA 90 bp | CTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACATCCCACATCCACAACTAGGGGAAAGGTaGCAAACATTGTTTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LPSSQEYIMKKFIYIPHPQLGER*QTLFKT Trigger: TGTCTTAAACAATGTTTGTCACCTTTCCCCTAGTTG...TGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| 3UTR-3UTR GCA 90 bp | CTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACATCCCACATCCATCACATCAAGTATACTaGTTGGCTAGCATCAATAAT | + |
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Preference number: 2 (lower is better) Translates to: LPSSQEYIMKKFIYIPHPSHQVY*LASINN Trigger: ATTATTGATGCTAGCCAAGCAGTATACTTGATGTGA...TGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| 3UTR TCA 72 bp | ATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATaGAGAAGTTCATATACATCCCACATCCACTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: MDMSYPVPRSTL*RSSYTSHIHCS Trigger: ACTGCAGTGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| 3UTR CCA 72 bp | AAATTTAAAAGTTCTCTAACTCTCAACCAGACACCTTaGGAACTACAATATGGATATGTCCTACCCAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: KFKSSLTLNQTP*ELQYGYVLPSS Trigger: GGAACTGGGTAGGACATATCCATATTGTAGTTCCCAAGGTGTCTGGTTGAGAGTTAGAGAACTTTTAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAACCCTGCAGACGCGGTTaGCGCCATTGCGCTCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PRVLIKEGQACHYILHSQPCRRG*RHCALS Trigger: TGACAGAGCGCAATGGCGGCAACCGCGTCTGCAGGG...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CCA 90 bp | AAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTACTTCGAGGGCCAGCTaGCGCTGCAGATTACTAAGC | + |
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Preference number: 4 (lower is better) Translates to: KRDKPATISFTHNSKDVCTSRAS*RCRLLS Trigger: GCTTAGTAATCTGCAGCGCCAGCTGGCCCTCGAAGT...ACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAAAGGGCCAGCTGGCGCTaGAGATTACTAAGCCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: PRVLIKEGQACHYILHSQRASWR*RLLSLE Trigger: CTCTAGGCTTAGTAATCTGCAGCGCCAGCTGGCCCT...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | ATCCCACATCCACTGCAGTATCTCAAAACTCTCCTAGTAACAGCATCCTCCCATAAGTGCCAGAAAACGTaGAGTGCAACTTCCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: IPHPLQYLKTLLVTASSHKCQKT*SATSHR Trigger: TCTATGGGAAGTTGCACTTCACGTTTTCTGGCACTT...ATGGGAGGATGCTGTTACTAGGAGAGTTTTGAGATACTGCAGTGGATGTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | ACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGAATCAGAAGTCTGTACCTaGCGCACGACATTAGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TSLPLYPSLTIPKMFVLESEVCT*RTTLAR Trigger: CCTAGCTAATGTCGTGCGTCAGGTACAGACTTCTGA...TTCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAATTCCAGTCAGGGCTCTaGAGCATCTGCATGATATGC | + |
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Preference number: 4 (lower is better) Translates to: PRVLIKEGQACHYILHSQFQSGL*SICMIC Trigger: GCATATCATGCAGATGCTTCAGAGCCCTGACTGGAA...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CCA 90 bp | AAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTAAATCATGCCGCTCTTaGGTCCCAAAAATCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KRDKPATISFTHNSKDVCKSCRS*VPKIPG Trigger: TCCTGGGATTTTTGGGACCCAAGAGCGGCATGATTT...ACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | ATCCCACATCCACTGCAGTATCTCAAAACTCTCCTAGTAACAGCATCCTCCCATCAACTAGGGGAAAGGTaGCAAACATTGTTTAAGACA | + |
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Preference number: 4 (lower is better) Translates to: IPHPLQYLKTLLVTASSHQLGER*QTLFKT Trigger: TGTCTTAAACAATGTTTGTCACCTTTCCCCTAGTTG...ATGGGAGGATGCTGTTACTAGGAGAGTTTTGAGATACTGCAGTGGATGTGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | CTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACATCCCACATCCAAGCTTTTTCTCTTGTTaGGCTGCTTTGCAGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LPSSQEYIMKKFIYIPHPSFFSC*AALQGE Trigger: TTCTCCCTGCAAAGCAGCTCAACAAGAGAAAAAGCT...TGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | ACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGAAACTCTCCGCAGCAACTaGATTGCTGTCAAAATCATC | + |
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Preference number: 4 (lower is better) Translates to: TSLPLYPSLTIPKMFVLETLRSN*IAVKII Trigger: GATGATTTTGACAGCAATGCAGTTGCTGCGGAGAGT...TTCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | TATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACCTGCTCTTCTATTTCTaGCGGCATCTAAGAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: YGYVLPSSQEYIMKKFIYLLFYF*RHLRGR Trigger: CCTTCCTCTTAGATGCCGTCAGAAATAGAAGAGCAG...GTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAATCTGAAGCATCTGCATaGTATGCTCCTTGGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: PRVLIKEGQACHYILHSQSEASA*YAPWSL Trigger: CAATGACCAAGGAGCATATCATGCAGATGCTTCAGA...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | CTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACATCCCACATCCACTTAGGTACGGTATCTaGAATCTCAACAAGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: LPSSQEYIMKKFIYIPHPLRYGI*NLNKGF Trigger: GAATCCCTTGTTGAGATTGCAGATACCGTACCTAAG...TGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | CTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACATCCCACATCCATTTCTCTTGTTGAGCTaGTTTGCAGGGAGAAAATGG | + |
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Preference number: 4 (lower is better) Translates to: LPSSQEYIMKKFIYIPHPFLLLS*FAGRKW Trigger: CCATTTTCTCCCTGCAAAGCAGCTCAACAAGAGAAA...TGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CCA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAAATCAGCAGGCAGATTTaGATAAACCTCCTCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: PRVLIKEGQACHYILHSQISRQI*INLLKP Trigger: GGGTTTGAGGAGGTTTATCCAAATCTGCCTGCTGAT...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CCA 90 bp | AAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTTTTTCAACATCGGAGTaGCAGTTTCAGACAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KRDKPATISFTHNSKDVCFSTSE*QFQTRS Trigger: TGACCTTGTCTGAAACTGCCACTCCGATGTTGAAAA...ACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | AAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTGAATCAGTTCAATCTTaGCATCTCTCTGAACATCAG | + |
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Preference number: 4 (lower is better) Translates to: KRDKPATISFTHNSKDVCESVQS*HLSEHQ Trigger: CTGATGTTCAGAGAGATGTCAAGATTGAACTGATTC...ACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | TATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACTCTCACCTCATAACCTaGTCTTCTATTTCTGACGGC | + |
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Preference number: 4 (lower is better) Translates to: YGYVLPSSQEYIMKKFIYSHLIT*SSISDG Trigger: GCCGTCAGAAATAGAAGAGCAGGTTATGAGGTGAGA...GTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAAATGATATCCAAATCATaGCGCTCTTGGGTCCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PRVLIKEGQACHYILHSQMISKS*RSWVPK Trigger: TTTTGGGACCCAAGAGCGGCATGATTTGGATATCAT...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CCA 90 bp | ACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGAACTCAACCAGACACCTTaGGAACTACAATATGGATAT | + |
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Preference number: 4 (lower is better) Translates to: TSLPLYPSLTIPKMFVLELNQTP*ELQYGY Trigger: ATATCCATATTGTAGTTCCCAAGGTGTCTGGTTGAG...TTCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | TATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACATCTTGACATCTCTCTaGACATCAGCAGGCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: YGYVLPSSQEYIMKKFIYILTSL*TSAGRF Trigger: AAATCTGCCTGCTGATGTTCAGAGAGATGTCAAGAT...GTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | CTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACATCCCACATCCAATTCCTGGCCAGCACTaGAAAAATATCACAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LPSSQEYIMKKFIYIPHPIPGQH*KNITKF Trigger: AAACTTTGTGATATTTTTGCAGTGCTGGCCAGGAAT...TGGATGTGGGATGTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAAATCATTGCTAATATATaGGGAACTGCCTGTGCAATA | + |
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Preference number: 4 (lower is better) Translates to: PRVLIKEGQACHYILHSQIIANI*GTACAI Trigger: TATTGCACAGGCAGTTCCTCATATATTAGCAATGAT...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | ACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGAATCACATCAAGTATACTaGTTGGCTAGCATCAATAAT | + |
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Preference number: 4 (lower is better) Translates to: TSLPLYPSLTIPKMFVLESHQVY*LASINN Trigger: ATTATTGATGCTAGCCAAGCAGTATACTTGATGTGA...TTCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR TCA 90 bp | GATAGCATGACATCTTCACATCAAGTATACTGCTTGGCTAGCATCAATAATAGTCCCAGGAGTACATTATaGAGAAGTTCATATACATCC | + |
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Preference number: 4 (lower is better) Translates to: DSMTSSHQVYCLASINNSPRSTL*RSSYTS Trigger: GGATGTATATGAACTTCTTCATAATGTACTCCTGGG...ACTATTATTGATGCTAGCCAAGCAGTATACTTGATGTGAAGATGTCATGCTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR GCA 90 bp | GATAGCATGACATCTTCACATCAAGTATACTGCTTGGCTAGCATCAATAATAGTAGCATCTGCATGATATaGTCCTTGGTCATTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: DSMTSSHQVYCLASINNSSICMI*SLVIGK Trigger: TTTACCAATGACCAAGGAGCATATCATGCAGATGCT...ACTATTATTGATGCTAGCCAAGCAGTATACTTGATGTGAAGATGTCATGCTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | TATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACCCCCTGCAGACGCGGTaGCCGCCATTGCGCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: YGYVLPSSQEYIMKKFIYPLQTR*PPLRSV Trigger: GACAGAGCGCAATGGCGGCAACCGCGTCTGCAGGGG...GTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS CCA 90 bp | GGAGTGGCAGTTTCAGACAAGGTCACTATAACTTCGAGGGCCAGCTaGCGCTGCAGATTACTAAGCCTAGAGTCTCCACATAACTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: GVAVSDKVTITSRAS*RCRLLSLESPHNFK Trigger: TTTGAAGTTATGTGGAGACTCTAGGCTTAGTAATCTGCAGCGCCAGCTGGCCCTCGAAGTTATAGTGACCTTGTCTGAAACTGCCACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | GACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGACAGTGCGGCAGCCATTaGTCTCACCTCATAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: DKPATISFTHNSKDVCPGQCGSH*SHLITC Trigger: GCAGGTTATGAGGTGAGACAAATGGCTGCCGCACTG...TCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS GCA 90 bp | GCAGTTTCAGACAAGGTCACTATAACTTCGAGGGCCAGCTGGCGCTaGAGATTACTAAGCCTAGAGTCTCCACATAACTTCAAACTCAAC | + |
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Preference number: 5 (lower is better) Translates to: AVSDKVTITSRASWR*RLLSLESPHNFKLN Trigger: GTTGAGTTTGAAGTTATGTGGAGACTCTAGGCTTAGTAATCTGCAGCGCCAGCTGGCCCTCGAAGTTATAGTGACCTTGTCTGAAACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | GACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGACAAATCATGCCGCTCTaGGGTCCCAAAAATCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DKPATISFTHNSKDVCPGQIMPL*GPKNPR Trigger: CCTGGGATTTTTGGGACCCAAGAGCGGCATGATTTG...TCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | AAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCATCAGCAGGCAGATTaGGATAAACCTCCTCAAACC | + |
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Preference number: 5 (lower is better) Translates to: KRDKPATISFTHNSKDVCHQQAD*DKPPQT Trigger: GGTTTGAGGAGGTTTATCCAAATCTGCCTGCTGATG...ACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | GACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGATATGCTCCTTGGTCATaGGTAAAACAACTTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: DKPATISFTHNSKDVCPGYAPWS*VKQLFH Trigger: GTGGAAAAGTTGTTTTACCAATGACCAAGGAGCATA...TCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | ACAAGCCTGCCACTATATCCTTCACTCACAATTCCAAAGATGTTTGTCCTGGAATGCATGATATGCTCCTaGGTCATTGGTAAAACAACT | + |
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Preference number: 5 (lower is better) Translates to: TSLPLYPSLTIPKMFVLECMICS*VIGKTT Trigger: AGTTGTTTTACCAATGACCAAGGAGCATATCATGCA...TTCCAGGACAAACATCTTTGGAATTGTGAGTGAAGGATATAGTGGCAGGCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | TATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACTGGTCCAACAACCGTTaGATGATATCCAAATCATGC | + |
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Preference number: 5 (lower is better) Translates to: YGYVLPSSQEYIMKKFIYWSNNR*MISKSC Trigger: GCATGATTTGGATATCATCAAACGGTTGTTGGACCA...GTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | TATGGATATGTCCTACCCAGTTCCCAGGAGTACATTATGAAGAAGTTCATATACTGGATGTTCTTGATCTaGAATACACTGGTCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: YGYVLPSSQEYIMKKFIYWMFLI*NTLVQQ Trigger: TTGTTGGACCAGTGTATTCAAGATCAAGAACATCCA...GTATATGAACTTCTTCATAATGTACTCCTGGGAACTGGGTAGGACATATCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | GATAGCATGACATCTTCACATCAAGTATACTGCTTGGCTAGCATCAATAATAGTGATTGCTGGATGTTCTaGATCTTGAATACACTGGTC | + |
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Preference number: 5 (lower is better) Translates to: DSMTSSHQVYCLASINNSDCWMF*ILNTLV Trigger: GACCAGTGTATTCAAGATCAAGAACATCCAGCAATC...ACTATTATTGATGCTAGCCAAGCAGTATACTTGATGTGAAGATGTCATGCTATC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS-3UTR CAA 90 bp | CCAAGAGTATTAATTAAAGAGGGACAAGCCTGCCACTATATCCTTCACTCACAACTGTTTCATCTAGAATaGATTCCATTTGTTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: PRVLIKEGQACHYILHSQLFHLE*IPFVDG Trigger: GCCATCAACAAATGGAATCAATTCTAGATGAAACAG...TTGTGAGTGAAGGATATAGTGGCAGGCTTGTCCCTCTTTAATTAATACTCTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS GCA 72 bp | GACAAGGTCACTATAACTTCGAGGGCCAGCTGGCGCTaGAGATTACTAAGCCTAGAGTCTCCACATAACTTC | + |
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Preference number: 6 (lower is better) Translates to: DKVTITSRASWR*RLLSLESPHNF Trigger: GAAGTTATGTGGAGACTCTAGGCTTAGTAATCTGCAGCGCCAGCTGGCCCTCGAAGTTATAGTGACCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS CCA 72 bp | GTTTCAGACAAGGTCACTATAACTTCGAGGGCCAGCTaGCGCTGCAGATTACTAAGCCTAGAGTCTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: VSDKVTITSRAS*RCRLLSLESPH Trigger: ATGTGGAGACTCTAGGCTTAGTAATCTGCAGCGCCAGCTGGCCCTCGAAGTTATAGTGACCTTGTCTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS CAA 90 bp | ACACTGGTCCAACAACCGTTTGATGATATCCAAATCATGCCGCTCTaGGGTCCCAAAAATCCCAGGAAAGTGCCAGAAAACGTGAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: TLVQQPFDDIQIMPL*GPKNPRKVPENVKC Trigger: GCACTTCACGTTTTCTGGCACTTTCCTGGGATTTTTGGGACCCAAGAGCGGCATGATTTGGATATCATCAAACGGTTGTTGGACCAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS CCA 72 bp | AACAACCGTTTGATGATATCCAAATCATGCCGCTCTTaGGTCCCAAAAATCCCAGGAAAGTGCCAGAAAACG | + |
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Preference number: 6 (lower is better) Translates to: NNRLMISKSCRS*VPKIPGKCQKT Trigger: CGTTTTCTGGCACTTTCCTGGGATTTTTGGGACCCAAGAGCGGCATGATTTGGATATCATCAAACGGTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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| CDS CAA 72 bp | CAACAACCGTTTGATGATATCCAAATCATGCCGCTCTaGGGTCCCAAAAATCCCAGGAAAGTGCCAGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: QQPFDDIQIMPL*GPKNPRKVPEN Trigger: GTTTTCTGGCACTTTCCTGGGATTTTTGGGACCCAAGAGCGGCATGATTTGGATATCATCAAACGGTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259569.6 |
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