Pregenerated sensors for RANBP3L (Homo sapiens)
Ensembl gene IDs: ENSG00000164188Ensembl transcript IDs: ENST00000296604.8, ENST00000502994.5, ENST00000505865.1, ENST00000515759.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTTCTTGTGTGATTCATaGGGTGTCTCTGAAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDFLCDS*GVSETN Trigger: ATTTGTTTCAGAGACACCTCATGAATCACACAAGAA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTCATTTAACAACTATTaGATGCTGACCATGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDSFNNY*MLTMSQ Trigger: TTGACTCATGGTCAGCATCCAATAGTTGTTAAATGA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| 3UTR CAA 90 bp | ATTTATTCATTTAACAACTATTGGATGCTGACCATGAGTCAAACATaGACAAGATGCAACAGATACAAGTCCAAGAGCAGATGCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: IYSFNNYWMLTMSQT*TRCNRYKSKSRCSF Trigger: AAAAGAGCATCTGCTCTTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAATAGTTGTTAAATGAATAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATACCATGAGTCAAACATaGACAAGATGCAACAGATAC | + |
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Preference number: 3 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDTMSQT*TRCNRY Trigger: GTATCTGTTGCATCTTGTCAATGTTTGACTCATGGT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| 3UTR GCA 72 bp | TATTGGATGCTGACCATGAGTCAAACATTGACAAGATaGAACAGATACAAGTCCAAGAGCAGATGCTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: YWMLTMSQTLTR*NRYKSKSRCSF Trigger: AAAAGAGCATCTGCTCTTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATAGCTACTCAGGAGGCTaGGTGAGGCACGAGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDSYSGG*VRHENP Trigger: GGGATTCTCGTGCCTCACTCAGCCTCCTGAGTAGCT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTACAGGTGTGCAAACTaGCAGGCAGGTGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDYRCAN*QAGGCC Trigger: GCAGCAGCCACCTGCCTGGCAGTTTGCACACCTGTA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTGCCAGGCAGGTGGCTaGTGCCTTTTCTTGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDCQAGG*CLFLVW Trigger: CCATACCAAGAAAAGGCAGCAGCCACCTGCCTGGCA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGCCAGTCACCTAAAGTaGCCTTCACCAGACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQASHLK*PSPDTQ Trigger: CTGGGTGTCTGGTGAAGGCCACTTTAGGTGACTGGC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAACCCAGAGTTTGCTGTTaGGGATCAGCCTTAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQPRVCC*GSALDC Trigger: GCAGTCTAAGGCTGATCCTCAACAGCAAACTCTGGG...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATGCAACCGACTGTCTGTaGGTCCAACTAGAAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDATDCL*VQLEGS Trigger: AGATCCTTCTAGTTGGACTCACAGACAGTCGGTTGC...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTTCAGTTTACAGGTGTaGAAACTGCCAGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDFSLQV*KLPGRW Trigger: CCACCTGCCTGGCAGTTTGCACACCTGTAAACTGAA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATATGACAGATTTTTCTTaGTGTCGCCGGTCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDMTDFS*CRRSSC Trigger: GCAGGAGGACCGGCGACAGCAAGAAAAATCTGTCAT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAAAACTGCCAGGCAGGTaGCTGCTGCCTTTTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQKLPGR*LLPFLG Trigger: ACCAAGAAAAGGCAGCAGCCACCTGCCTGGCAGTTT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTTCCTTTTGGCGACATaGAATCCAATGCCTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDFLLAT*NPMPPV Trigger: TACTGGAGGCATTGGATTTCATGTCGCCAAAAGGAA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGCACAACTTCGAGCTTaGGGTAGCTGCAAAATAGCA | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQAQLRA*GSCKIA Trigger: TGCTATTTTGCAGCTACCTCAAGCTCGAAGTTGTGC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAAACACTTTGGGAGGCTaGGGCAAAGTGTATCACTTG | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQNTLGG*GKVYHL Trigger: CAAGTGATACACTTTGCCTCAGCCTCCCAAAGTGTT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATACATTCTGGTTCTGCTaGTTCATACAGGGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDTFWFC*FIQGVF Trigger: GAAGACACCCTGTATGAAGCAGCAGAACCAGAATGT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGTCTCAACGTTCCTCTaGCCCTTTCAATCCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQVSTFL*PFQSRI Trigger: AATCCTGGATTGAAAGGGGCAGAGGAACGTTGAGAC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGCTGCTGCCTTTTCTTaGTATGGTAGTCATGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQAAAFS*YGSHGP Trigger: AGGACCATGACTACCATACCAAGAAAAGGCAGCAGC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGGCTGGGTGAGTTTTTaGGTACCCAAAACTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQGWVSF*VPKTLS Trigger: AGAAAGAGTTTTGGGTACTCAAAAACTCACCCAGCC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAATTGTGGTTTGCTCTTTaGATCTTCATTTGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQLWFAL*IFIWAQ Trigger: CTGGGCCCAAATGAAGATTCAAAGAGCAAACCACAA...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGACAGGCTTTCAGCTTaGTTGACATCTCTCTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQDRLSA*LTSLCL Trigger: TAAGCAGAGAGATGTCAATCAAGCTGAAAGCCTGTC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATATGAAAATTTTCTGCTaGGTGTGTTCCGCATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDMKIFC*VCSASE Trigger: CTCTGATGCGGAACACACTCAGCAGAAAATTTTCAT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATATTACATTCTGGTTCTaGTGCTTCATACAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDITFWF*CFIQGV Trigger: GACACCCTGTATGAAGCAGCAGAACCAGAATGTAAT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAATGCTGCATACAAATATaGTGTATCTTGGGCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQCCIQI*CILGTG Trigger: GCCAGTGCCCAAGATACAGCATATTTGTATGCAGCA...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATCCGTACACGCTTTGTTaGAAAACCATTACATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDPYTLC*KTITFW Trigger: CCAGAATGTAATGGTTTTCCAACAAAGCGTGTACGG...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATATATGGGTTGAGCAATaGCAGATTTTTCTTGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDIWVEQ*QIFLAV Trigger: GACAGCAAGAAAAATCTGTCATTGCTCAACCCATAT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAAGCCTTAGACTGCCTTaGTTGCGCATAATTAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQSLRLP*LRIISL Trigger: AAGACTAATTATGCGCAATCAAGGCAGTCTAAGGCT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATAGTGCAACAAGACGATaGTGTATTGCTGCATACAAA | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDSATRR*CIAAYK Trigger: TTTGTATGCAGCAATACATCATCGTCTTGTTGCACT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATCATCTCTCTGCTTATTaGAGCTTTGAAGTGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDHLSAY*SFEVQQ Trigger: TTGTTGCACTTCAAAGCTTCAATAAGCAGAGAGATG...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGTGTGGGGACGAGGATaGACATGTCAAAAAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQVWGRG*TCQKDK Trigger: TTTATCTTTTTGACATGTTCATCCTCGTCCCCACAC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATCTCTCTTTGCCTTGCTaGTATTCTAACCCTACATTT | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDLSLPC*YSNPTF Trigger: AAATGTAGGGTTAGAATATCAGCAAGGCAAAGAGAG...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATGAAAAGAAGGCTAGATaGAGATACAGGACAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDEKKAR*RYRTRK Trigger: TTTCCTTGTCCTGTATCTTCATCTAGCCTTCTTTTC...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATCGACATGAAATCCAATaGCTCCAGTATTTAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDRHEIQ*LQYLEK Trigger: CTTCTCTAAATACTGGAGGCATTGGATTTCATGTCG...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATCTTGCAAGATTCCAGTaGCTTGTGTCCAAATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDLARFQ*LVSKCF Trigger: AAAACATTTGGACACAAGGCACTGGAATCTTGCAAG...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAATGGTTAGTAGACAGCTaGACTGAAATTCTAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQWLVDS*TEILAL Trigger: AAGGGCTAGAATTTCAGTCCAGCTGTCTACTAACCA...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTCTTGGGCACTGGCCTaGATTAAAAATATTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDSWALA*IKNILM Trigger: CATCAAAATATTTTTAATTCAGGCCAGTGCCCAAGA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAACCAACTAGAAGGATCTaGTCCATTTTTAGTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQPTRRI*SIFSDL Trigger: CAAGTCACTAAAAATGGATCAGATCCTTCTAGTTGG...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTGTTCCCACATCAGCTaGGATCTTAACAATAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDCSHIS*DLNNKR Trigger: TCTTTTATTGTTAAGATCTCAGCTGATGTGGGAACA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTGCAGATCTTGTCTTTaGATGTACAACATATACTCC | + |
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Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDCRSCL*MYNIYS Trigger: GGAGTATATGTTGTACATGCAAAGACAAGATCTGCA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAATACAGGGTGTCTTCTaGAGGTCTCTTAAAAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQIQGVF*RSLKSL Trigger: CAAACTTTTAAGAGACCTGCAGAAGACACCCTGTAT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAACACTGGAAGAATGAATaGGCCTCTCTTAGTAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQHWKNE*ASLSSY Trigger: ATAACTACTAAGAGAGGCCCATTCATTCTTCCAGTG...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAATGAAAAGTAAAAGATaGAGACCGTACACGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQMKSKR*RPYTLC Trigger: ACAAAGCGTGTACGGTCTTCATCTTTTACTTTTCAT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAATTTCGGAATGGATTTaGATGGTTTTTCCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQISEWI*MVFPWH Trigger: ATGCCAAGGAAAAACCATTCAAATCCATTCCGAAAT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR TCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGGGTTGAAAGAGTTGTaGGCTAAATATCATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQGLKEL*AKYHVS Trigger: AGAAACATGATATTTAGCTCACAACTCTTTCAACCC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATACGATGATGTATTGCTaGATACAAATATGCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDTMMYC*IQICCI Trigger: GATACAGCATATTTGTATGCAGCAATACATCATCGT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATAAGACGATGATGTATTaGTGCATACAAATATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDKTMMY*CIQICC Trigger: ACAGCATATTTGTATGCAGCAATACATCATCGTCTT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATATTGAAGCTTTGAAGTaGAACAAGACGATGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDIEALK*NKTMMY Trigger: ATACATCATCGTCTTGTTGCACTTCAAAGCTTCAAT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAACAAACATTGACAAGATaGAACAGATACAAGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQQTLTR*NRYKSK Trigger: CTTGGACTTGTATCTGTTGCATCTTGTCAATGTTTG...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAATTTCTCTTCTCTCTTTaGCTTGCTGATATTCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQFLFSL*LADILT Trigger: GGTTAGAATATCAGCAAGGCAAAGAGAGAAGAGAAA...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAAAAACCATTACATTCTaGTTCTGCTGCTTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQKTITF*FCCFIQ Trigger: CTGTATGAAGCAGCAGAACCAGAATGTAATGGTTTT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATCTGTATCTTGGGCACTaGCCTGAATTAAAAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDLYLGH*PELKIF Trigger: AAATATTTTTAATTCAGGCCAGTGCCCAAGATACAG...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATCCATTTTTAGTGACTTaGATGAAATCATCCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDPFLVT*MKSSSF Trigger: GAATGAGGATGATTTCATCCAAGTCACTAAAAATGG...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTTGGTTTTGTTGCACTaGCATTTCTATATAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDLVLLH*HFYIDE Trigger: CTCATCTATATAGAAATGCCAGTGCAACAAAACCAA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR GCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAATATCAACACTACTTTaGACAAGAGCTGATGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQISTLL*TRADVI Trigger: TATGACATCAGCTCTTGTGCAAAGTAGTGTTGATAT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CCA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAATCATTTAACAACTATTaGATGCTGACCATGAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDADHESNIDKMQQIQVQSFNNY*MLTMSQ Trigger: TTGACTCATGGTCAGCATCCAATAGTTGTTAAATGA...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| 3UTR CAA 72 bp | TTCTCTCTTTGCCTTGCTGATATTCTAACCCTACATTaGGTTTTGTTGCACTGGCATTTCTATATAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLCLADILTLH*VLLHWHFYIDE Trigger: CTCATCTATATAGAAATGCCAGTGCAACAAAACCAAATGTAGGGTTAGAATATCAGCAAGGCAAAGAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS CCA 90 bp | TCCTCCTGCAGCTTCAGTTTACAGGTGTGCAAACTGCCAGGCAGGTaGCTGCTGCCTTTTCTTGGTATGGTAGTCATGGTCCTAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSFSLQVCKLPGR*LLPFLGMVVMVLAV Trigger: TACTGCTAGGACCATGACTACCATACCAAGAAAAGGCAGCAGCCACCTGCCTGGCAGTTTGCACACCTGTAAACTGAAGCTGCAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000296604.8 ENST00000502994.5 ENST00000505865.1 ENST00000515759.5 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGCCCAGAGTTTGCTGTaGAGGATCAGCCTTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQAQSLL*RISLRL Trigger: CAGTCTAAGGCTGATCCTCAACAGCAAACTCTGGGC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAAATGACAGATTTTTCTaGCTGTCGCCGGTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQNDRFF*LSPVLL Trigger: CAGGAGGACCGGCGACAGCAAGAAAAATCTGTCATT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATGACATCCTACTGATGTaGCACCTAAAAAGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDDILLM*HLKSPG Trigger: ACCAGGACTTTTTAGGTGCAACATCAGTAGGATGTC...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAAGGCTGGGTGAGTTTTaGAGTACCCAAAACTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQRLGEF*STQNSF Trigger: GAAAGAGTTTTGGGTACTCAAAAACTCACCCAGCCT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATTCTTTGAATCTTCATTaGGGCCCAGAGTTTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDSLNLH*GPEFAV Trigger: AACAGCAAACTCTGGGCCCAAATGAAGATTCAAAGA...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGGCAAAGTGTATCACTaGAGATCAGGAGTTCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQGKVYH*RSGVQD Trigger: GTCTTGAACTCCTGATCTCAAGTGATACACTTTGCC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAACCGTACACGCTTTGTaGGAAAACCATTACATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQTVHAL*ENHYIL Trigger: CAGAATGTAATGGTTTTCCAACAAAGCGTGTACGGT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATAAGACCGTACACGCTTaGTTGGAAAACCATTACATT | + |
|
Preference number: 5 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDKTVHA*LENHYI Trigger: AATGTAATGGTTTTCCAACAAAGCGTGTACGGTCTT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATATGTTTCACAGGACCTaGTTCAGCACTCTTTATATC | + |
|
Preference number: 5 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDMFHRT*FSTLYI Trigger: GATATAAAGAGTGCTGAACAAGGTCCTGTGAAACAT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAACTGCTTATTGAAGCTTaGAAGTGCAACAAGACGATG | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQLLIEA*KCNKTM Trigger: CATCGTCTTGTTGCACTTCAAAGCTTCAATAAGCAG...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATATTCTAACCCTACATTaGGTTTTGTTGCACTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDILTLH*VLLHWH Trigger: ATGCCAGTGCAACAAAACCAAATGTAGGGTTAGAAT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS TCA 90 bp | ACCTTGTTCAGCACTCTTTATATCAACACTACTTTGCACAAGAGCTaGTGTCATAAAAACATTGTTTTTCCTCACTCCCTGGGACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLFSTLYINTTLHKS*CHKNIVFPHSLGLR Trigger: TCTCAGTCCCAGGGAGTGAGGAAAAACAATGTTTTTATGACATCAGCTCTTGTGCAAAGTAGTGTTGATATAAAGAGTGCTGAACAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000515759.5 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAGATGTCATAAAAACATaGTTTTTCCTCACTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQDVIKT*FFLTPW Trigger: CCAGGGAGTGAGGAAAAACAATGTTTTTATGACATC...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TCAGATAATTGCTTAGGGGTCACAATCAAAGTCACTTCGAAGCCATGGTGTGATAATTTCGGAATGGATTaGAATGGTTTTTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDNCLGVTIKVTSKPWCDNFGMD*NGFSLA Trigger: TGCCAAGGAAAAACCATTCAAATCCATTCCGAAATT...ATCACACCATGGCTTCGAAGTGACTTTGATTGTGACCCCTAAGCAATTATCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAACCCTACATTTGGTTTaGTTGCACTGGCATTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQTLHLV*LHWHFY Trigger: ATAGAAATGCCAGTGCAACAAAACCAAATGTAGGGT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS GCA 90 bp | GCTTTCAGCTTGATTGACATCTCTCTGCTTATTGAAGCTTTGAAGTaGAACAAGACGATGATGTATTGCTGCATACAAATATGCTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: AFSLIDISLLIEALK*NKTMMYCCIQICCI Trigger: GATACAGCATATTTGTATGCAGCAATACATCATCGTCTTGTTGCACTTCAAAGCTTCAATAAGCAGAGAGATGTCAATCAAGCTGAAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000502994.5 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAATGCAGATCTTGTCTTaGCATGTACAACATATACTC | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQMQILS*HVQHIL Trigger: GAGTATATGTTGTACATGCAAAGACAAGATCTGCAT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS-3UTR CAA 90 bp | TTGGATGCTGACCATGAGTCAAACATTGACAAGATGCAACAGATACAAGTCCAAATGTTTTTCTTACTTTaGCACAACTTCGAGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDADHESNIDKMQQIQVQMFFLL*HNFELE Trigger: CTCAAGCTCGAAGTTGTGCAAAAGTAAGAAAAACAT...TTGGACTTGTATCTGTTGCATCTTGTCAATGTTTGACTCATGGTCAGCATCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296604.8 |
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| CDS GCA 72 bp | GCAATGACAGATTTTTCTTGCTGTCGCCGGTCCTCCTaGAGCTTCAGTTTACAGGTGTGCAAACTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AMTDFSCCRRSS*SFSLQVCKLPG Trigger: GCCTGGCAGTTTGCACACCTGTAAACTGAAGCTGCAGGAGGACCGGCGACAGCAAGAAAAATCTGTCATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000296604.8 ENST00000502994.5 ENST00000505865.1 ENST00000515759.5 |
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| CDS CCA 72 bp | AGCTTCAGTTTACAGGTGTGCAAACTGCCAGGCAGGTaGCTGCTGCCTTTTCTTGGTATGGTAGTCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFSLQVCKLPGR*LLPFLGMVVMV Trigger: GACCATGACTACCATACCAAGAAAAGGCAGCAGCCACCTGCCTGGCAGTTTGCACACCTGTAAACTGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000296604.8 ENST00000502994.5 ENST00000505865.1 ENST00000515759.5 |
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| CDS GCA 72 bp | GAAGCTTTGAAGTGCAACAAGACGATGATGTATTGCTaGATACAAATATGCTGTATCTTGGGCACTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EALKCNKTMMYC*IQICCILGTGL Trigger: CAGGCCAGTGCCCAAGATACAGCATATTTGTATGCAGCAATACATCATCGTCTTGTTGCACTTCAAAGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000502994.5 |
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| CDS TCA 72 bp | GTAGGTAGTATTCATGAACAGGCAACCGACTGTCTGTaGGTCCAACTAGAAGGATCTGATCCATTTTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGSIHEQATDCL*VQLEGSDPFLV Trigger: CACTAAAAATGGATCAGATCCTTCTAGTTGGACTCACAGACAGTCGGTTGCCTGTTCATGAATACTACCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000502994.5 |
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| CDS TCA 72 bp | GTAGCTGTTATTCGTACATTTTTGTGGTTTGCTCTTTaGATCTTCATTTGGGCCCAGAGTTTGCTGTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VAVIRTFLWFAL*IFIWAQSLLLR Trigger: CCTCAACAGCAAACTCTGGGCCCAAATGAAGATTCAAAGAGCAAACCACAAAAATGTACGAATAACAGCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000502994.5 |
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| CDS GCA 72 bp | ATTGAAGCTTTGAAGTGCAACAAGACGATGATGTATTaGTGCATACAAATATGCTGTATCTTGGGCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: IEALKCNKTMMY*CIQICCILGTG Trigger: GCCAGTGCCCAAGATACAGCATATTTGTATGCAGCAATACATCATCGTCTTGTTGCACTTCAAAGCTTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000502994.5 |
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| CDS CCA 72 bp | GTCCAACTAGAAGGATCTGATCCATTTTTAGTGACTTaGATGAAATCATCCTCATTCTCATCACAGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: VQLEGSDPFLVT*MKSSSFSSQLS Trigger: CGAAAGCTGTGATGAGAATGAGGATGATTTCATCCAAGTCACTAAAAATGGATCAGATCCTTCTAGTTGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000502994.5 |
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| CDS CCA 72 bp | GATGTTGCACCTAAAAAGTCCTGGTTAGTAGACAGCTaGACTGAAATTCTAGCCCTTGATAAATTTTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: DVAPKKSWLVDS*TEILALDKFSL Trigger: AAGTGAAAATTTATCAAGGGCTAGAATTTCAGTCCAGCTGTCTACTAACCAGGACTTTTTAGGTGCAACATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000296604.8 ENST00000502994.5 ENST00000515759.5 |
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| CDS GCA 72 bp | ACCCAGAAATACATAGATTCATGCAGATCTTGTCTTTaGATGTACAACATATACTCCTCTACTAAACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TQKYIDSCRSCL*MYNIYSSTKLP Trigger: TGGAAGTTTAGTAGAGGAGTATATGTTGTACATGCAAAGACAAGATCTGCATGAATCTATGTATTTCTGGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000296604.8 ENST00000502994.5 ENST00000505865.1 ENST00000515759.5 |
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| CDS GCA 72 bp | TTGATTGACATCTCTCTGCTTATTGAAGCTTTGAAGTaGAACAAGACGATGATGTATTGCTGCATACAAATA | + |
|
Preference number: 6 (lower is better) Translates to: LIDISLLIEALK*NKTMMYCCIQI Trigger: TATTTGTATGCAGCAATACATCATCGTCTTGTTGCACTTCAAAGCTTCAATAAGCAGAGAGATGTCAATCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296604.8 ENST00000502994.5 |
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