RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RANBP17 (Homo sapiens)

Ensembl gene IDs: ENSG00000204764

Ensembl transcript IDs: ENST00000389118.8, ENST00000443155.5, ENST00000517629.1, ENST00000518492.1, ENST00000519130.5, ENST00000519256.5, ENST00000519944.1, ENST00000519949.5, ENST00000520586.5, ENST00000520864.5, ENST00000520879.5, ENST00000521165.1, ENST00000521759.5, ENST00000522066.5, ENST00000522380.2, ENST00000522533.5, ENST00000522734.1, ENST00000523189.6, ENST00000523665.5, ENST00000523727.1

Found 1113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTaGATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACAT +
Preference number: 1 (lower is better)
Translates to: SAHGQKSRVSSSCRD*MVQCCHHCATPLPH
Trigger: ATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 90 bp ACGGACAGGTTCTGCTCCACTCCTTCCATTAGGTTTCTGAAGCACTaGGCAAGGACCTCCTGCTTGGGGAGGGGCTGGCTGTTTATCAAA +
Preference number: 1 (lower is better)
Translates to: TDRFCSTPSIRFLKH*ARTSCLGRGWLFIK
Trigger: TTTGATAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAGGAGTGGAGCAGAACCTGTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 90 bp GTCTTCTTCCATCTGCTCCAGTTTGAACTGGTTGCTCTCAAGGCCTaGGGCACAGCTGTTATCCGAGAGCTTCCCTTAGCCTCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: VFFHLLQFELVALKA*GTAVIRELPLASLL
Trigger: CAGGAGAGAGGCTAAGGGAAGCTCTCGGATAACAGCTGTGCCTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATGGAAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR CCA 90 bp CACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATaGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCT +
Preference number: 1 (lower is better)
Translates to: HMVRKVGSAHHVETA*FSVAITAQRLCHIS
Trigger: AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 90 bp GGCAAGGACCTCCTGCTTGGGGAGGGGCTGGCTGTTTATCAAACTTaGTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGAGCCC +
Preference number: 1 (lower is better)
Translates to: GKDLLLGEGLAVYQT*SQFTEILLIEQDEP
Trigger: GGGCTCATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 90 bp TCCACTCCTTCCATTAGGTTTCTGAAGCACTGGGCAAGGACCTCCTaGTTGGGGAGGGGCTGGCTGTTTATCAAACTTGCTCTCAGTTCA +
Preference number: 1 (lower is better)
Translates to: STPSIRFLKHWARTS*LGRGWLFIKLALSS
Trigger: TGAACTGAGAGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAGGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 90 bp TGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGTAATAGTCTCTaGCCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCC +
Preference number: 1 (lower is better)
Translates to: CCRTSGFCCIKCNSL*PAWVASLHRSGFLP
Trigger: GGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGACTATTACATTTTATGCAGCAAAACCCAGATGTCCTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 90 bp AGCCCTTCACAGGAAGATGTCTGTCTTCTTCCATCTGCTCCAGTTTaGACTGGTTGCTCTCAAGGCCTGAGGCACAGCTGTTATCCGAGA +
Preference number: 1 (lower is better)
Translates to: SPSQEDVCLLPSAPV*TGCSQGLRHSCYPR
Trigger: TCTCGGATAACAGCTGTGCCTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATGGAAGAAGACAGACATCTTCCTGTGAAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR GCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTaGTCCACTCCTTCCATTAGGTTTCTGAAGCACTGGGCAAGGACC +
Preference number: 1 (lower is better)
Translates to: DRFWVNLSLFLTDRF*STPSIRFLKHWART
Trigger: GGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 90 bp GTCGAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTaGCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTC +
Preference number: 1 (lower is better)
Translates to: VETAWFSVAITAQRL*HISSEYRQILGEPV
Trigger: GACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTG +
Preference number: 1 (lower is better)
Translates to: GEGTLGTSSQTAWCS*SLCSVQRQSLEDLL
Trigger: CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 90 bp AGGTTTCTGAAGCACTGGGCAAGGACCTCCTGCTTGGGGAGGGGCTaGCTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCA +
Preference number: 1 (lower is better)
Translates to: RFLKHWARTSCLGRG*LFIKLALSSLKYFS
Trigger: TGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 90 bp TTCACAGGAAGATGTCTGTCTTCTTCCATCTGCTCCAGTTTGAACTaGTTGCTCTCAAGGCCTGAGGCACAGCTGTTATCCGAGAGCTTC +
Preference number: 1 (lower is better)
Translates to: FTGRCLSSSICSSLN*LLSRPEAQLLSESF
Trigger: GAAGCTCTCGGATAACAGCTGTGCCTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATGGAAGAAGACAGACATCTTCCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR TCA 90 bp GGAGTTGTACATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATG +
Preference number: 1 (lower is better)
Translates to: GVVHVGSPYHRSTAF*RRGRYVGYIQSNSM
Trigger: CATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 90 bp AGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTaGGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGT +
Preference number: 1 (lower is better)
Translates to: SHLIVLLSLNFIRCS*GREACVWSCGMLCS
Trigger: ACTACAGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR GCA 90 bp GTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAT +
Preference number: 1 (lower is better)
Translates to: VHPVKQHGVAGLCVQ*KGNPSKISCQPDQH
Trigger: ATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 90 bp ATACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAT +
Preference number: 1 (lower is better)
Translates to: IHPVKQHGVAGLCVQ*KGNPSKISCQPDQH
Trigger: ATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR GCA 90 bp TGTGCCATACTATTAAACGAAAGCGAGGGGCCTGGCATCCCTCTGTaGACAGAGCTGGTATTGTCACAGTGTAATAAGGATACATCCAGT +
Preference number: 1 (lower is better)
Translates to: CAILLNESEGPGIPL*TELVLSQCNKDTSS
Trigger: ACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCGCTTTCGTTTAATAGTATGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CCA 90 bp GCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCC +
Preference number: 1 (lower is better)
Translates to: ASSRHITNYSFNRFQ*HSSQSRIHGEGCIS
Trigger: GGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR CCA 90 bp GATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCCCTTCACAGGAAGATGTCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: DDDESDRSQGRRNPS*IGLPQALHRKMSVF
Trigger: GAAGACAGACATCTTCCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR GCA 90 bp GCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAGTT +
Preference number: 1 (lower is better)
Translates to: AGLCVQCKGNPSKIS*QPDQHTLYIFLFKV
Trigger: AACTTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 90 bp GTGCTCAGTTATCTGCTCTGCTGCCACTGTGCTGTAATTTTTAGCTaGTTACACATTAGTTCATTTAGCTTTGTTTCCTCTTCCCTACTG +
Preference number: 1 (lower is better)
Translates to: VLSYLLCCHCAVIFS*LHISSFSFVSSSLL
Trigger: CAGTAGGGAAGAGGAAACAAAGCTAAATGAACTAATGTGTAATCAGCTAAAAATTACAGCACAGTGGCAGCAGAGCAGATAACTGAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CCA 90 bp AACAGTAGAGCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTaGGGTGAGTCAGAATCCCAAGTCCCAACAGTAATAAGAGTTTTT +
Preference number: 1 (lower is better)
Translates to: NSRAQTVKVFFMFWV*GESESQVPTVIRVF
Trigger: AAAAACTCTTATTACTGTTGGGACTTGGGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGCTCTACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCCAACATCACTGTCCTaGGACCCAGACCTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDAPTSLS*DPDLQE
Trigger: CTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGG...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTCAGAGGACTGGGTGCTaGCACCACCCAGAACTTCTG +
Preference number: 2 (lower is better)
Translates to: SLTSLGSLSASKWLLALFQRTGC*HHPELL
Trigger: CAGAAGTTCTGGGTGGTGCCAGCACCCAGTCCTCTG...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: SLTSLGSLSASKWLLALFPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTGTTCTGGGTTTGGGGTaGGTCAGAATCCCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: SLTSLGSLSASKWLLALFVLGLG*VRIPSP
Trigger: GGGACTTGGGATTCTGACTCACCCCAAACCCAGAAC...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTACAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: EACVWSCGMLCSASRLVLQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACAGGGAGGCCTGCGTGTaGTCCTGTGGGATGCTCTGT +
Preference number: 2 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHREACV*SCGMLC
Trigger: ACAGAGCATCCCACAGGACCACACGCAGGCCTCCCT...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCGAGAGGCCTGGATACTaGCCACTGGTTCCGACAGTC +
Preference number: 2 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSERPGY*PLVPTV
Trigger: GACTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTC...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCGCCCCAGGAGAGGCCTaGATACTGACCACTGGTTCC +
Preference number: 2 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFAPGEA*ILTTGS
Trigger: GGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGC...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGACAAGGACCTCCTGCTTaGGGAGGGGCTGGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRQGPPA*GGAGCL
Trigger: TAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTG...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CAA 90 bp GCTAGCCAACATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: ASQHHCPETQTFRSL*IKAAPHMVRKVGSA
Trigger: AGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 2 (lower is better)
Translates to: SLTSLGSLSASKWLLALFLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCGGTGGGCAGATTGCTTaGGTTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSGGQIA*VQEFET
Trigger: GGTCTCGAACTCCTGAACTCAAGCAATCTGCCCACC...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389118.8
3UTR-3UTR TCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGACCACCCAGAACTTCTaGCTGGGGCTACATGACTCC +
Preference number: 2 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLTTQNF*LGLHDS
Trigger: GGAGTCATGTAGCCCCAGTCAGAAGTTCTGGGTGGT...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTATCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: EACVWSCGMLCSASRLVLSLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTCAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTTGTGGTCCTGTGGGATaGTCTGTAGTGCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVCGPVG*SVVLPG
Trigger: GCCTGGAAGCACTACAGAGCATCCCACAGGACCACA...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTAACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: EACVWSCGMLCSASRLVLTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 2 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTAGAGCCACGCAAGGCCTaGACCTTAGACTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVEPRKA*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGCCTTGCGTGGCTC...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519256.5
3UTR-3UTR CCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTTGCTCCAGTTTGAACTaGTTGCTCTCAAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPCSSLN*LLSRPE
Trigger: CTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCA...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR TCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTAAGCTCATATGGTCCTaGGTGAGACATTCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: ETAWFSVAITAQRLCHISKLIWS*VRHSRS
Trigger: ACTCCTGGAATGTCTCACTCAGGACCATATGAGCTT...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACAAGGACCTCCTGCTTaGGGAGGGGCTGGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: TAQRLCHISSEYRQILGEQGPPA*GGAGCL
Trigger: TAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTG...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCAGGTTTCTGAAGCACTaGGCAAGGACCTCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSRFLKH*ARTSCL
Trigger: CAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTATTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 2 (lower is better)
Translates to: EACVWSCGMLCSASRLVLFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGAGGGAGGCCTGCGTGTaGTCCTGTGGGATGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLREACV*SCGMLC
Trigger: ACAGAGCATCCCACAGGACCACACGCAGGCCTCCCT...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTCCTTCTCTGGAACTCTaGGTACATCACTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLPSLEL*VHHSSG
Trigger: GCCTGAGGAGTGATGTACCCAGAGTTCCAGAGAAGG...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519256.5
ENST00000519949.5
3UTR CAA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: GTLGTSSQTAWCSWS*CSVQRQSLEDLLPA
Trigger: GGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CAA 90 bp ACAGGAAGATGTCTGTCTTCTTCCATCTGCTCCAGTTTGAACTGGTaGCTCTCAAGGCCTGAGGCACAGCTGTTATCCGAGAGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: TGRCLSSSICSSLNW*LSRPEAQLLSESFP
Trigger: AGGGAAGCTCTCGGATAACAGCTGTGCCTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATGGAAGAAGACAGACATCTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR CAA 90 bp AAGCCCTTCACAGGAAGATGTCTGTCTTCTTCCATCTGCTCCAGTTaGAACTGGTTGCTCTCAAGGCCTGAGGCACAGCTGTTATCCGAG +
Preference number: 2 (lower is better)
Translates to: KPFTGRCLSSSICSS*NWLLSRPEAQLLSE
Trigger: CTCGGATAACAGCTGTGCCTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATGGAAGAAGACAGACATCTTCCTGTGAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR TCA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: SLTSLGSLSASKWLLALFKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACCTTCCATTAGGTTTCTaGAGCACTGGGCAAGGACCT +
Preference number: 2 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHLPLGF*STGQGP
Trigger: AGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAG...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTCCAACATCACTGTCCTaGGACCCAGACCTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAPTSLS*DPDLQE
Trigger: CTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGG...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGACAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTAAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 2 (lower is better)
Translates to: EACVWSCGMLCSASRLVLNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 2 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 2 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAAGGGAGGCCTGCGTGTaGTCCTGTGGGATGCTCTGT +
Preference number: 2 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIREACV*SCGMLC
Trigger: ACAGAGCATCCCACAGGACCACACGCAGGCCTCCCT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCCAGAACTTCTGACTaGGGCTACATGACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTPRTSD*GYMTPP
Trigger: AGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGG...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CAA 90 bp AACGAAAGCGAGGGGCCTGGCATCCCTCTGTGCACAGAGCTGGTATaGTCACAGTGTAATAAGGATACATCCAGTCAAACAGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: NESEGPGIPLCTELV*SQCNKDTSSQTAWC
Trigger: ACACCATGCTGTTTGACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCGCTTTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR-3UTR TCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACCACACAAGGCAGACTTaGGAGCTGAATAGCAGATGG +
Preference number: 2 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHHTRQT*ELNSRW
Trigger: CCATCTGCTATTCAGCTCTCAAGTCTGCCTTGTGTG...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCCCAACATCACTGTCCTaGGACCCAGACCTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: AQTVKVFFMFWVWGESESPTSLS*DPDLQE
Trigger: CTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGG...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGACTGACTGGGGCTACATaGCTCCTCCTGAAGAAATAT +
Preference number: 2 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRLTGAT*LLLKKY
Trigger: ATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAG...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCACCATCTGCTCCAGTTTaGACTGGTTGCTCTCAAGGC +
Preference number: 2 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSPSAPV*TGCSQG
Trigger: GCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATGG...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR GCA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTATCCATGGTGAAGGCTaGATCTCCAACAAATTGACA +
Preference number: 2 (lower is better)
Translates to: ETAWFSVAITAQRLCHISIHGEG*ISNKLT
Trigger: TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGAT...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 2 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 2 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTGTAGCAAGTCACTGTaGGACACTGACAGCAGCATT +
Preference number: 2 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSCSKSL*DTDSSI
Trigger: AATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACA...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCCAGAACTTCTGACTaGGGCTACATGACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TAQRLCHISSEYRQILGEPRTSD*GYMTPP
Trigger: AGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGG...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATACAGAGGACTGGGTGCTaGCACCACCCAGAACTTCTG +
Preference number: 2 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIQRTGC*HHPELL
Trigger: CAGAAGTTCTGGGTGGTGCCAGCACCCAGTCCTCTG...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 2 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 2 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 2 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSLTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCGTCACTGTGGGACACTaGCAGCAGCATTTTGACAAA +
Preference number: 2 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFVTVGH*QQHFDK
Trigger: TTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGAC...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTAGACAATGGTGTTCATaGGGACAGACATCATCTGCT +
Preference number: 2 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVRQWCS*GQTSSA
Trigger: AGCAGATGATGTCTGTCCTCATGAACACCATTGTCT...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAACCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 2 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 2 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCTCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSSLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGATACGAGCATATACCTaGACCTTAGACTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWIRAYT*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGTATATGCTCGTAT...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389118.8
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTTTCCAAGCCTTCTCTaGAACTCTGGGTACATCACT +
Preference number: 2 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLFPSLL*NSGYIT
Trigger: AGTGATGTACCCAGAGTTCCAGAGAAGGCTTGGAAA...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519256.5
ENST00000519949.5
3UTR-3UTR TCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 2 (lower is better)
Translates to: PEVAETMIVTDAKKREVFLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CCAAGCCTTCTCTGGAACTCTGGGTACATCACTCCTCAGGCGTACAACTGGGCAAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 2 (lower is better)
Translates to: PSLLWNSGYITPQAYNWARSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...TGCCCAGTTGTACGCCTGAGGAGTGATGTACCCAGAGTTCCAGAGAAGGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519256.5
3UTR-3UTR TCA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAACCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: MVVPIQLEDAKADIISTQPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCCCAACATCACTGTCCTaGGACCCAGACCTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTPTSLS*DPDLQE
Trigger: CTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGG...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTCTCTCCTGTGTTTaGTCCTCTGATTCTCAGATC +
Preference number: 2 (lower is better)
Translates to: TAQRLCHISSEYRQILGEPLSCV*SSDSQI
Trigger: GATCTGAGAATCAGAGGATCAAACACAGGAGAGAGG...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR GCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 2 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACATCCATGGTGAAGGCTaGATCTCCAACAAATTGACA +
Preference number: 2 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHIHGEG*ISNKLT
Trigger: TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGAT...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAATACGAGCATATACCTaGACCTTAGACTGTGATCCC +
Preference number: 2 (lower is better)
Translates to: ILIFTQIYHQKASERCVEIRAYT*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGTATATGCTCGTAT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp AACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGCTCTCTGCATCGAAGTaGCTTCTTGCCCTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: NMVKLHLLQDIWVLLHKMLSASK*LLALFC
Trigger: GCAAAAGAGGGCAAGAAGCCACTTCGATGCAGAGAG...CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389118.8
3UTR-3UTR CCA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTAAAAATACATTCCCCTaGGCTAGCCAACATCACTGT +
Preference number: 2 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLKNTFP*ASQHHC
Trigger: ACAGTGATGTTGGCTAGCCCAGGGGAATGTATTTTT...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CAA 90 bp GAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGGAAGATGTCTGTCTTCTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: ESDRSQGRRNPSWIG*PQALHRKMSVFFHL
Trigger: CAGATGGAAGAAGACAGACATCTTCCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR TCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 2 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AAACATACTGAAGCTGTGGATAAATTCAGAGCTTTAGGAACATGGCCTCAGGCTGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 2 (lower is better)
Translates to: KHTEAVDKFRALGTWPQAGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...AGCCTGAGGCCATGTTCCTAAAGCTCTGAATTTATCCACAGCTTCAGTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389118.8
3UTR-3UTR TCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGAAGCTCATATGGTCCTaGGTGAGACATTCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLKLIWS*VRHSRS
Trigger: ACTCCTGGAATGTCTCACTCAGGACCATATGAGCTT...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATGTTCTGGGTTTGGGGTaGGTCAGAATCCCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: PRTVLGSPKKAELLQILYVLGLG*VRIPSP
Trigger: GGGACTTGGGATTCTGACTCACCCCAAACCCAGAAC...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 2 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAAATACAGACAGATTTTaGGTGAACCTGTCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRNTDRF*VNLSLF
Trigger: GAACAGAGACAGGTTCACCCAAAATCTGTCTGTATT...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCCCAGAACTTCTGACTaGGGCTACATGACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: VPNAASSRHITNYSFNRFPRTSD*GYMTPP
Trigger: AGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGG...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 2 (lower is better)
Translates to: VPNAASSRHITNYSFNRFLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 2 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 2 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCACCACCCAGAACTTCTaGCTGGGGCTACATGACTCC +
Preference number: 2 (lower is better)
Translates to: WVALRRQSCFKYYILIVTTTQNF*LGLHDS
Trigger: GGAGTCATGTAGCCCCAGTCAGAAGTTCTGGGTGGT...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTCATCCTCTGAAAATCTaGATTTTAGCACCTAGAACT +
Preference number: 2 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVHPLKI*ILAPRT
Trigger: AGTTCTAGGTGCTAAAATTCAGATTTTCAGAGGATG...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 2 (lower is better)
Translates to: PRTVLGSPKKAELLQILYPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATCAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: HLELFWVALRRQSCFKYYQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGTGTGGTCCTGTGGGATaGTCTGTAGTGCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQCGPVG*SVVLPG
Trigger: GCCTGGAAGCACTACAGAGCATCCCACAGGACCACA...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAACAGACATCATCTGCTaGAGGACATCTGGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: LAPRTVLGSPKKAELLQITDIIC*RTSGFC
Trigger: GCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 2 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 2 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: AQTVKVFFMFWVWGESESSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 2 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGCTGCTGCAGGACATCTaGGTTTTGCTGCATAAAATG +
Preference number: 2 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLLLQDI*VLLHKM
Trigger: CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAG...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCTGCTTGGGGAGGGGCTaGCTGTTTATCAAACTTGCT +
Preference number: 2 (lower is better)
Translates to: VPNAASSRHITNYSFNRFCLGRG*LFIKLA
Trigger: AGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCA...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATTTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGTTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 2 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGGTCTTCTTCATGTTCTaGGTTTGGGGTGAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWVFFMF*VWGESE
Trigger: TTCTGACTCACCCCAAACCCAGAACATGAAGAAGAC...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 2 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 2 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 2 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGTCACTGTGGGACACTaGCAGCAGCATTTTGACAAA +
Preference number: 2 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTVTVGH*QQHFDK
Trigger: TTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGAC...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCACCTGTCTCTGTTCTTaGCGGACAGGTTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSTCLCS*RTGSAP
Trigger: TGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGT...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATCTGACTGGGGCTACATaGCTCCTCCTGAAGAAATAT +
Preference number: 2 (lower is better)
Translates to: HLELFWVALRRQSCFKYYLTGAT*LLLKKY
Trigger: ATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAG...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 2 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: LAPRTVLGSPKKAELLQISLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 2 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: LAPRTVLGSPKKAELLQITAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: LAPRTVLGSPKKAELLQISSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 2 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATCTCTCTGCATCGAAGTaGCTTCTTGCCCTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHLSASK*LLALFC
Trigger: GCAAAAGAGGGCAAGAAGCCACTTCGATGCAGAGAG...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAAAAAATACATTCCCCTaGGCTAGCCAACATCACTGT +
Preference number: 2 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTKNTFP*ASQHHC
Trigger: ACAGTGATGTTGGCTAGCCCAGGGGAATGTATTTTT...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGCCTTCTCTGGAACTCTaGGTACATCACTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMPSLEL*VHHSSG
Trigger: GCCTGAGGAGTGATGTACCCAGAGTTCCAGAGAAGG...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519949.5
3UTR-3UTR TCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: VPNAASSRHITNYSFNRFKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATCTGACTGGGGCTACATaGCTCCTCCTGAAGAAATAT +
Preference number: 2 (lower is better)
Translates to: PRTVLGSPKKAELLQILYLTGAT*LLLKKY
Trigger: ATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAG...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCTGTGTTTGATCCTCTaGTTCTCAGATCCCATCTCT +
Preference number: 2 (lower is better)
Translates to: VPNAASSRHITNYSFNRFLCLIL*FSDPIS
Trigger: AGAGATGGGATCTGAGAATCAGAGGATCAAACACAG...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR GCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGCTGTCTTCTTCCATCTaGTCCAGTTTGAACTGGTTG +
Preference number: 2 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTLSSSI*SSLNWL
Trigger: CAACCAGTTCAAACTGGAGCAGATGGAAGAAGACAG...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR GCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATACAGACATCATCTGCTaGAGGACATCTGGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: PRTVLGSPKKAELLQILYTDIIC*RTSGFC
Trigger: GCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGT...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 2 (lower is better)
Translates to: PEVAETMIVTDAKKREVFNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp GTCAAAATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: VKMVVPIQLEDAKADIISTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...GGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 2 (lower is better)
Translates to: QDLITISANHFTSFSEEKGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAATTTCCAAGCCTTCTCTaGAACTCTGGGTACATCACT +
Preference number: 2 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGEFPSLL*NSGYIT
Trigger: AGTGATGTACCCAGAGTTCCAGAGAAGGCTTGGAAA...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519949.5
3UTR-3UTR TCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 2 (lower is better)
Translates to: AQTVKVFFMFWVWGESESRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: IQLEDAKADIISTQGRLEDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: HLELFWVALRRQSCFKYYDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCCGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTT +
Preference number: 2 (lower is better)
Translates to: WVALRRQSCFKYYILIVTRSTAF*RRGRYV
Trigger: AACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACG...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCTGCCACATCTCTTCTaGATACAGACAGATTTTGGG +
Preference number: 2 (lower is better)
Translates to: NAASSRHITNYSFNRFQWLPHLF*IQTDFG
Trigger: CCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAG...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATTCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHSLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGATCCATGGTGAAGGCTaGATCTCCAACAAATTGACA +
Preference number: 2 (lower is better)
Translates to: IQLEDAKADIISTQGRLEIHGEG*ISNKLT
Trigger: TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGAT...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 2 (lower is better)
Translates to: KGQDLITISANHFTSFSERRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 2 (lower is better)
Translates to: KGQDLITISANHFTSFSEKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATTCAAAATTCAAACGCTaGGATCTGTTTTGCATAAGT +
Preference number: 2 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDSKFKR*DLFCIS
Trigger: ACTTATGCAAAACAGATCCCAGCGTTTGAATTTTGA...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTTCATGTTCTGGGTTTaGGGTGAGTCAGAATCCCAA +
Preference number: 2 (lower is better)
Translates to: PRTVLGSPKKAELLQILYFMFWV*GESESQ
Trigger: TTGGGATTCTGACTCACCCCAAACCCAGAACATGAA...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 2 (lower is better)
Translates to: VLEITGSYLPQYLRFVTILDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 2 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp GTCAAAATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 2 (lower is better)
Translates to: VKMVVPIQLEDAKADIISELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...GGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: QDLITISANHFTSFSEEKKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: KGQDLITISANHFTSFSEKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 2 (lower is better)
Translates to: MVVPIQLEDAKADIISTQRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 2 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMLTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 2 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 2 (lower is better)
Translates to: QDLITISANHFTSFSEEKSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 2 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATAAAAATACATTCCCCTaGGCTAGCCAACATCACTGT +
Preference number: 2 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHKNTFP*ASQHHC
Trigger: ACAGTGATGTTGGCTAGCCCAGGGGAATGTATTTTT...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAATTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 2 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGTCTTCTTCATGTTCTaGGTTTGGGGTGAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQVFFMF*VWGESE
Trigger: TTCTGACTCACCCCAAACCCAGAACATGAAGAAGAC...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR GCA 90 bp AACCCTTGGCAAAGGTCAATTCAAATTTTACACCAAATGACAAACCTTGACTTAGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 2 (lower is better)
Translates to: NPWQRSIQILHQMTNLDLGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...TAAGTCAAGGTTTGTCATTTGGTGTAAAATTTGAATTGACCTTTGCCAAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR-3UTR CCA 90 bp ATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCAAAAATACATTCCCCTaGGCTAGCCAACATCACTGT +
Preference number: 2 (lower is better)
Translates to: ITNYSFNRFQWHSSQSRIKNTFP*ASQHHC
Trigger: ACAGTGATGTTGGCTAGCCCAGGGGAATGTATTTTT...GATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATCATCCTCTGAAAATCTaGATTTTAGCACCTAGAACT +
Preference number: 2 (lower is better)
Translates to: PRTVLGSPKKAELLQILYHPLKI*ILAPRT
Trigger: AGTTCTAGGTGCTAAAATTCAGATTTTCAGAGGATG...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR TCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 2 (lower is better)
Translates to: QDLITISANHFTSFSEEKRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR GCA 90 bp TATAAATATTTGCTCTTCATCCCTCGCCCAAAGGAAAACTATAAATCTTGTCTCACAGGTGAAATGACTTaGCAAGGTTCACAACACAGT +
Preference number: 2 (lower is better)
Translates to: YKYLLFIPRPKENYKSCLTGEMT*QGSQHS
Trigger: ACTGTGTTGTGAACCTTGGCAAGTCATTTCACCTGT...GAGACAAGATTTATAGTTTTCCTTTGGGCGAGGGATGAAGAGCAAATATTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CAA 90 bp TTAAGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAGACTTCTGACATACGAGCATATACC +
Preference number: 2 (lower is better)
Translates to: LRFVTIFVMNVSRTW*SSVIPKTSDIRAYT
Trigger: GGTATATGCTCGTATGTCAGAAGTCTTAGGAATAACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR CAA 90 bp AGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAGTTGTTGTaGAATATTTGTAATACTGTTTCAAAAGCAACTGTAAGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SPINIRFTSSCLKLL*NICNTVSKATVRGS
Trigger: GCTGCCTCTTACAGTTGCTTTTGAAACAGTATTACAAATATTCAACAACAACTTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR TCA 90 bp AACCCTTGGCAAAGGTCAATTCAAATTTTACACCAAATGACAAACCTTGACTTAAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 2 (lower is better)
Translates to: NPWQRSIQILHQMTNLDLRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...TAAGTCAAGGTTTGTCATTTGGTGTAAAATTTGAATTGACCTTTGCCAAGGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR-3UTR CCA 90 bp TATAAATATTTGCTCTTCATCCCTCGCCCAAAGGAAAACTATAAATCTTGTCTCTCTGTAACCCTTCTCTaGGTACATAAATCTGATGAA +
Preference number: 2 (lower is better)
Translates to: YKYLLFIPRPKENYKSCLSVTLL*VHKSDE
Trigger: TTCATCAGATTTATGTACCCAGAGAAGGGTTACAGA...GAGACAAGATTTATAGTTTTCCTTTGGGCGAGGGATGAAGAGCAAATATTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR TCA 72 bp CGGACAGGTTCTGCTCCACTCCTTCCATTAGGTTTCTaGAGCACTGGGCAAGGACCTCCTGCTTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: RTGSAPLLPLGF*STGQGPPAWGG
Trigger: CCCTCCCCAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAGGAGTGGAGCAGAACCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 3 (lower is better)
Translates to: SLTSLGSLSASKWLLALFSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 72 bp CGCTGGGGAGCCACGCAAGGCCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATGATGAATCAGATCGTT +
Preference number: 3 (lower is better)
Translates to: RWGATQGLDLRL*SLVQMMMNQIV
Trigger: AACGATCTGATTCATCATCATCTGAACCAGGGATCACAGTCTAAGGTCCAGGCCTTGCGTGGCTCCCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519256.5
3UTR TCA 72 bp CATCTGCTCCAGTTTGAACTGGTTGCTCTCAAGGCCTaGGGCACAGCTGTTATCCGAGAGCTTCCCTTAGCC +
Preference number: 3 (lower is better)
Translates to: HLLQFELVALKA*GTAVIRELPLA
Trigger: GGCTAAGGGAAGCTCTCGGATAACAGCTGTGCCTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR GCA 72 bp GTCAGCTCATCATGTCGAGACTGCATGGTTCAGTGTTaGCATCACTGCGCAACGCCTCTGCCACATCTCTTC +
Preference number: 3 (lower is better)
Translates to: VSSSCRDCMVQC*HHCATPLPHLF
Trigger: GAAGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTCGACATGATGAGCTGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 72 bp GGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTaGATGGTTCAGTGTTGCCATCACTGCGCAACGCCT +
Preference number: 3 (lower is better)
Translates to: GQKSRVSSSCRD*MVQCCHHCATP
Trigger: AGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 72 bp GAGGACTGGGTGCTGGCACCACCCAGAACTTCTGACTaGGGCTACATGACTCCTCCTGAAGAAATATCTCTG +
Preference number: 3 (lower is better)
Translates to: EDWVLAPPRTSD*GYMTPPEEISL
Trigger: CAGAGATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGGTGGTGCCAGCACCCAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR CCA 72 bp AGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATaGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: RKVGSAHHVETA*FSVAITAQRLC
Trigger: GCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 3 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR CAA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 3 (lower is better)
Translates to: ETAWFSVAITAQRLCHISKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTATGCATCTCCAACAAATaGACAACCTTGACTGCAGAA +
Preference number: 3 (lower is better)
Translates to: EACVWSCGMLCSASRLVLCISNK*TTLTAE
Trigger: TTCTGCAGTCAAGGTTGTCAATTTGTTGGAGATGCA...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 3 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGACTGAAATACTTCTCATaGAGCAGGATGAGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRLKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAG...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 72 bp GTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: VKQHGVAGLCVQ*KGNPSKISCQP
Trigger: GGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 72 bp AAAGCGAGGGGCCTGGCATCCCTCTGTGCACAGAGCTaGTATTGTCACAGTGTAATAAGGATACATCCAGTC +
Preference number: 3 (lower is better)
Translates to: KARGLASLCAQS*YCHSVIRIHPV
Trigger: GACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR-3UTR CAA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 3 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCTGAAATACTTCTCATaGAGCAGGATGAGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTLKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAG...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 72 bp CATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTTGGGTACATCCAGTCA +
Preference number: 3 (lower is better)
Translates to: HVGSPYHRSTAF*RRGRYVGYIQS
Trigger: TGACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 72 bp GCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTaGCACATCTCTTCTGAATACAGACAGATTTTGGGT +
Preference number: 3 (lower is better)
Translates to: AWFSVAITAQRL*HISSEYRQILG
Trigger: ACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 72 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: GEGTLGTSSQTA*CSWSLCSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 72 bp GACTGGCTCAGTTTCCGGTATTGTAGCAAGTCACTGTaGGACACTGACAGCAGCATTTTGACAAAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: DWLSFRYCSKSL*DTDSSILTKAW
Trigger: CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATACCGGAAACTGAGCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 3 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 3 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTTTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 3 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTLSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 3 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHTGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCAACCTGTCTCTGTTCTaGACGGACAGGTTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: AQTVKVFFMFWVWGESESNLSLF*TDRFCS
Trigger: GGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTT...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 72 bp ACATCTGGGTTTTGCTGCATAAAATGTAATAGTCTCTaGCCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGC +
Preference number: 3 (lower is better)
Translates to: TSGFCCIKCNSL*PAWVASLHRSG
Trigger: GCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGACTATTACATTTTATGCAGCAAAACCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR GCA 72 bp CTATTAAACGAAAGCGAGGGGCCTGGCATCCCTCTGTaGACAGAGCTGGTATTGTCACAGTGTAATAAGGAT +
Preference number: 3 (lower is better)
Translates to: LLNESEGPGIPL*TELVLSQCNKD
Trigger: ATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTCGCTTTCGTTTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CCA 72 bp ACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAA +
Preference number: 3 (lower is better)
Translates to: TLGTSSQTAWCS*SLCSVQRQSLE
Trigger: TTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 3 (lower is better)
Translates to: VEGCSTPEVAETMIVTDAKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 3 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 3 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATCTGCATGGTTCAGTGTaGCCATCACTGCGCAACGCC +
Preference number: 3 (lower is better)
Translates to: PRTVLGSPKKAELLQILYLHGSV*PSLRNA
Trigger: GGCGTTGCGCAGTGATGGCAACACTGAACCATGCAG...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAATGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 3 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAGCACCTAGAACTGTTTaGGGTAGCCCTAAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIAPRTV*GSPKKA
Trigger: TGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGC...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR TCA 72 bp GTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTaGAGGCTGCATCTCCAACAAATTGACAACCTTGAC +
Preference number: 3 (lower is better)
Translates to: VPMAFVSIQDPW*RLHLQQIDNLD
Trigger: GTCAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR GCA 72 bp TGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACGCTTTACATCTTCTTG +
Preference number: 3 (lower is better)
Translates to: CVQCKGNPSKIS*QPDQHTLYIFL
Trigger: CAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR CCA 72 bp GAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCCCTTCACAGGAAGATG +
Preference number: 3 (lower is better)
Translates to: ESDRSQGRRNPS*IGLPQALHRKM
Trigger: CATCTTCCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
3UTR-3UTR CAA 90 bp GGAAACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 3 (lower is better)
Translates to: GNMVKLHLLQDIWVLLHKVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389118.8
3UTR-3UTR CAA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 3 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 3 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GTCAAAATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCTGGGAGTTGTACATGTaGGCTCTCCATACCACCGTT +
Preference number: 3 (lower is better)
Translates to: VKMVVPIQLEDAKADIISWELYM*ALHTTV
Trigger: AACGGTGGTATGGAGAGCCAACATGTACAACTCCCA...GGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACGCTGGGATCTGTTTaGCATAAGTTCTGCCATAAG +
Preference number: 3 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTTLGSV*HKFCHK
Trigger: CTTATGGCAGAACTTATGCAAAACAGATCCCAGCGT...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 3 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCAC +
Preference number: 3 (lower is better)
Translates to: NAASSRHITNYSFNRFQWTFRSL*IKAAPH
Trigger: GTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGT...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 3 (lower is better)
Translates to: PEVAETMIVTDAKKREVFGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 3 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 3 (lower is better)
Translates to: LAPRTVLGSPKKAELLQITGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCAC +
Preference number: 3 (lower is better)
Translates to: WVALRRQSCFKYYILIVTTFRSL*IKAAPH
Trigger: GTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGT...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: ILIFTQIYHQKASERCVEKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 72 bp GGTGAAATGACTTGCCAAGGTTCACAACACAGTAAATaGAGAGCTGGGATTTTAAGCCGGGTCTGTCTATCA +
Preference number: 3 (lower is better)
Translates to: GEMTCQGSQHSK*RAGILSRVCLS
Trigger: TGATAGACAGACCCGGCTTAAAATCCCAGCTCTTCATTTACTGTGTTGTGAACCTTGGCAAGTCATTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CCA 72 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTaGGGTGAGTCAGAATCCCAAGTCCCAACAGTAATA +
Preference number: 3 (lower is better)
Translates to: AQTVKVFFMFWV*GESESQVPTVI
Trigger: TATTACTGTTGGGACTTGGGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 3 (lower is better)
Translates to: KGQDLITISANHFTSFSEEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 3 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCAC +
Preference number: 3 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVTFRSL*IKAAPH
Trigger: GTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGT...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATGCATCTCCAACAAATaGACAACCTTGACTGCAGAA +
Preference number: 3 (lower is better)
Translates to: LAPRTVLGSPKKAELLQICISNK*TTLTAE
Trigger: TTCTGCAGTCAAGGTTGTCAATTTGTTGGAGATGCA...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGGCACCTAGAACTGTTTaGGGTAGCCCTAAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMAPRTV*GSPKKA
Trigger: TGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGC...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTAGTTTTTGTGGAGAGTaGGAAACCAGCTATTTCTCA +
Preference number: 3 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVSFCGE*ETSYFS
Trigger: TGAGAAATAGCTGGTTTCCAACTCTCCACAAAAACT...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR TCA 72 bp AACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTaGGTCAGAATCCCAAGTCCCAACAGTAATAAGAGT +
Preference number: 3 (lower is better)
Translates to: NCKGLLHVLGLG*VRIPSPNSNKS
Trigger: ACTCTTATTACTGTTGGGACTTGGGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR TCA 72 bp GCCCTTGGCCTTTTCCCAAGGAAGCTGATTTGCTACTaGAACTCAATTATTATAAGCAACGCCAGTACCAAA +
Preference number: 3 (lower is better)
Translates to: ALGLFPRKLICY*NSIIISNASTK
Trigger: TTTGGTACTGGCGTTGCTTATAATAATTGAGTTTCAGTAGCAAATCAGCTTCCTTGGGAAAAGGCCAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CCA 72 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGGATCCATGGTGAAGGC +
Preference number: 3 (lower is better)
Translates to: RHITNYSFNRFQ*HSSQSRIHGEG
Trigger: GCCTTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 3 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GTCAAAATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 3 (lower is better)
Translates to: VKMVVPIQLEDAKADIISGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...GGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: WVALRRQSCFKYYILIVTWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCTGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: AQTVKVFFMFWVWGESESCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGTGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR CCA 72 bp CCCCTGACCCTGATAACTTCAACATCTATGGTCAAATaGAGGAGACAAAGGTTTCTAGTTCACAAGAAAACA +
Preference number: 3 (lower is better)
Translates to: PLTLITSTSMVK*RRQRFLVHKKT
Trigger: TGTTTTCTTGTGAACTAGAAACCTTTGTCTCCTCCATTTGACCATAGATGTTGAAGTTATCAGGGTCAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR-3UTR CAA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 3 (lower is better)
Translates to: PRTVLGSPKKAELLQILYGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTTGGGAGTTGTACATGTaGGCTCTCCATACCACCGTT +
Preference number: 3 (lower is better)
Translates to: FWVALRRQSCFKYYILIVWELYM*ALHTTV
Trigger: AACGGTGGTATGGAGAGCCAACATGTACAACTCCCA...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAAGTTTTTGTGGAGAGTaGGAAACCAGCTATTTCTCA +
Preference number: 3 (lower is better)
Translates to: MVVPIQLEDAKADIISTQSFCGE*ETSYFS
Trigger: TGAGAAATAGCTGGTTTCCAACTCTCCACAAAAACT...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCAGTTTTTGTGGAGAGTaGGAAACCAGCTATTTCTCA +
Preference number: 3 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVSFCGE*ETSYFS
Trigger: TGAGAAATAGCTGGTTTCCAACTCTCCACAAAAACT...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGAGATAGTAAAACACTaGACAGTGGACGATCTCAAA +
Preference number: 3 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTEIVKH*TVDDLK
Trigger: TTTGAGATCGTCCACTGTCAAGTGTTTTACTATCTC...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCGAGATAGTAAAACACTaGACAGTGGACGATCTCAAA +
Preference number: 3 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVEIVKH*TVDDLK
Trigger: TTTGAGATCGTCCACTGTCAAGTGTTTTACTATCTC...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 3 (lower is better)
Translates to: VLEITGSYLPQYLRFVTIKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp TATAAATATTTGCTCTTCATCCCTCGCCCAAAGGAAAACTATAAATCTTGTCTCAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 3 (lower is better)
Translates to: YKYLLFIPRPKENYKSCLKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...GAGACAAGATTTATAGTTTTCCTTTGGGCGAGGGATGAAGAGCAAATATTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR-3UTR CAA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGTGCATCTCCAACAAATaGACAACCTTGACTGCAGAA +
Preference number: 3 (lower is better)
Translates to: QDLITISANHFTSFSEEKCISNK*TTLTAE
Trigger: TTCTGCAGTCAAGGTTGTCAATTTGTTGGAGATGCA...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR-3UTR CAA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCTGCATCTCCAACAAATaGACAACCTTGACTGCAGAA +
Preference number: 3 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSCISNK*TTLTAE
Trigger: TTCTGCAGTCAAGGTTGTCAATTTGTTGGAGATGCA...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATTGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR-3UTR CAA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAATCACATAGGAGAAACTaGTTTCAAAGCCAACTTGCT +
Preference number: 3 (lower is better)
Translates to: KGQDLITISANHFTSFSESHRRN*FQSQLA
Trigger: AGCAAGTTGGCTTTGAAACAAGTTTCTCCTATGTGA...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519256.5
3UTR-3UTR CAA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCTGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR TCA 72 bp ATAATCAAGTTTTTCCTATGGAAACAATGTCCTCTATaGTCCTTACCAAGAGTAGTGAGTCCCTCTGAGATA +
Preference number: 3 (lower is better)
Translates to: IIKFFLWKQCPL*SLPRVVSPSEI
Trigger: TATCTCAGAGGGACTCACTACTCTTGGTAAGGATCATAGAGGACATTGTTTCCATAGGAAAAACTTGATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519256.5
3UTR CCA 72 bp ACACACTTAGGTGCAAACCTGGTTTATTACGTTCTTTaGTTAAATATTGTTTCTACATCCTTTCAGAGCATT +
Preference number: 3 (lower is better)
Translates to: THLGANLVYYVL*LNIVSTSFQSI
Trigger: AATGCTCTGAAAGGATGTAGAAACAATATTTAACCAAAGAACGTAATAAACCAGGTTTGCACCTAAGTGTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGCCCCAGGAGAGGCCTaGATACTGACCACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSAPGEA*ILTTGS
Trigger: GGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGC...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTAGCCCCAGGAGAGGCCTaGATACTGACCACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EACVWSCGMLCSASRLVLAPGEA*ILTTGS
Trigger: GGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGC...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTGAGAGGCCTGGATACTaGCCACTGGTTCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDAERPGY*PLVPTV
Trigger: GACTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTC...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTACAAGGACCTCCTGCTTaGGGAGGGGCTGGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: EACVWSCGMLCSASRLVLQGPPA*GGAGCL
Trigger: TAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTG...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTCCAACATCACTGTCCTaGGACCCAGACCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSPTSLS*DPDLQE
Trigger: CTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGG...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTGCCAAACTCTGGAAGTaGAGCGCCATCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDAAKLWK*SAIFPG
Trigger: TCCTGGGAAGATGGCGCTGCACTTCCAGAGTTTGGC...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTAAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: EACVWSCGMLCSASRLVLSQLGL*CHVIQN
Trigger: ATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCT...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGGAGAGGCCTGGATACTaGCCACTGGTTCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPERPGY*PLVPTV
Trigger: GACTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTC...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTACCACCCAGAACTTCTaGCTGGGGCTACATGACTCC +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPTTQNF*LGLHDS
Trigger: GGAGTCATGTAGCCCCAGTCAGAAGTTCTGGGTGGT...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTAGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 4 (lower is better)
Translates to: EACVWSCGMLCSASRLVLGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCGCCCCAGGAGAGGCCTaGATACTGACCACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSAPGEA*ILTTGS
Trigger: GGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGC...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCAAGGGATACTGGCGCTaGGGAGCCACGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPKGYWR*GATQGL
Trigger: CAGGCCTTGCGTGGCTCCCCAGCGCCAGTATCCCTT...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519256.5
CDS-3UTR CCA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTAGGCTGCTCCGCACATaGTCAGAAAAGTCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ETAWFSVAITAQRLCHISRLLRT*SEKSGQ
Trigger: CTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCT...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTAGGCTGCTCCGCACATaGTCAGAAAAGTCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPRLLRT*SEKSGQ
Trigger: CTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCT...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAAGGGAGGCCTGCGTGTaGTCCTGTGGGATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRREACV*SCGMLC
Trigger: ACAGAGCATCCCACAGGACCACACGCAGGCCTCCCT...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTAGGGAGGCCTGCGTGTaGTCCTGTGGGATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVREACV*SCGMLC
Trigger: ACAGAGCATCCCACAGGACCACACGCAGGCCTCCCT...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTTGCATGGTTCAGTGTTaGCATCACTGCGCAACGCCT +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPCMVQC*HHCATP
Trigger: AGGCGTTGCGCAGTGATGGCAACACTGAACCATGCA...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDAKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAGCCCCAGGAGAGGCCTaGATACTGACCACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTAPGEA*ILTTGS
Trigger: GGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGC...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTACCACCCAGAACTTCTaGCTGGGGCTACATGACTCC +
Preference number: 4 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVTTQNF*LGLHDS
Trigger: GGAGTCATGTAGCCCCAGTCAGAAGTTCTGGGTGGT...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGTGCATGGTTCAGTGTTaGCATCACTGCGCAACGCCT +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPCMVQC*HHCATP
Trigger: AGGCGTTGCGCAGTGATGGCAACACTGAACCATGCA...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDATAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTAACTGGTACAGCAGCTaGAGGAGACAACTGTATCAA +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDANWYSS*RRQLYQ
Trigger: TTGATACAGTTGTCTCCTCCAGCTGCTGTACCAGTT...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGCTGCAGGACATCTaGGTTTTGCTGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDALLQDI*VLLHKM
Trigger: CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAG...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGAGGTTTCTGAAGCACTaGGCAAGGACCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPRFLKH*ARTSCL
Trigger: CAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCT...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTATTTCCAAGCCTTCTCTaGAACTCTGGGTACATCACT +
Preference number: 4 (lower is better)
Translates to: EACVWSCGMLCSASRLVLFPSLL*NSGYIT
Trigger: AGTGATGTACCCAGAGTTCCAGAGAAGGCTTGGAAA...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519949.5
CDS-3UTR CCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGAGGCTGCTCCGCACATaGTCAGAAAAGTCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWRLLRT*SEKSGQ
Trigger: CTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCT...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGCCCAGAACTTCTGACTaGGGCTACATGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPPRTSD*GYMTPP
Trigger: AGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGG...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTCGAAAGCGAGGGGCCTaGCATCCCTCTGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: KFILIFTQIYHQKASERCRKRGA*HPSVHR
Trigger: TCTGTGCACAGAGGGATGCCAGGCCCCTCGCTTTCG...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGGTCCTTCCTGAATGGTaGTGTCCACAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPVLPEW*CPQLHQ
Trigger: CTGGTGTAACTGTGGACATCACCATTCAGGAAGGAC...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAGGTGGGCAGATTGCTTaGGTTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTGGQIA*VQEFET
Trigger: GGTCTCGAACTCCTGAACTCAAGCAATCTGCCCACC...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR TCA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGAGAGGCCTGGATACTaGCCACTGGTTCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: KFILIFTQIYHQKASERCERPGY*PLVPTV
Trigger: GACTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTC...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACACCAACATCACTGTCCTaGGACCCAGACCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTPTSLS*DPDLQE
Trigger: CTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGG...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTCTGACTGGGGCTACATaGCTCCTCCTGAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPLTGAT*LLLKKY
Trigger: ATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAG...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCGTTCTGGGTTTGGGGTaGGTCAGAATCCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPVLGLG*VRIPSP
Trigger: GGGACTTGGGATTCTGACTCACCCCAAACCCAGAAC...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCGCCAAACTCTGGAAGTaGAGCGCCATCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFAKLWK*SAIFPG
Trigger: TCCTGGGAAGATGGCGCTGCACTTCCAGAGTTTGGC...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTTTGGAATCTGCACCGTaGAAAGATCATCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSLESAP*KDHLQI
Trigger: AATCTGCAGATGATCTTTGCACGGTGCAGATTCCAA...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCCAGTGTTGCCATCACTaGGCAACGCCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPQCCHH*ATPLPH
Trigger: ATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTG...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTATCCATGGTGAAGGCTaGATCTCCAACAAATTGACA +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSIHGEG*ISNKLT
Trigger: TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGAT...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTATCCATGGTGAAGGCTaGATCTCCAACAAATTGACA +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDAIHGEG*ISNKLT
Trigger: TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGAT...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATGTGGTCCTGTGGGATaGTCTGTAGTGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTCGPVG*SVVLPG
Trigger: GCCTGGAAGCACTACAGAGCATCCCACAGGACCACA...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTGATCTCTCACAACTATaGCAACAGAGTCCAACCGAG +
Preference number: 4 (lower is better)
Translates to: ETAWFSVAITAQRLCHISDLSQL*QQSPTE
Trigger: CTCGGTTGGACTCTGTTGCCATAGTTGTGAGAGATC...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 4 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCAAGCCTTCTCTGGAACTCTGGGTACATCACTCCTCAGGCGTACAACTGGGCATGTAGCAAGTCACTGTaGGACACTGACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: PSLLWNSGYITPQAYNWACSKSL*DTDSSI
Trigger: AATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACA...TGCCCAGTTGTACGCCTGAGGAGTGATGTACCCAGAGTTCCAGAGAAGGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519256.5
CDS-3UTR CCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCAGAGGACTGGGTGCTaGCACCACCCAGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDQRTGC*HHPELL
Trigger: CAGAAGTTCTGGGTGGTGCCAGCACCCAGTCCTCTG...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLSQLGL*CHVIQN
Trigger: ATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCT...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCCATATTCACATCTGCTaGCCGTGCACAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSHIHIC*PCTTAP
Trigger: TGGAGCAGTTGTGCACGGTCAGCAGATGTGAATATG...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGGTCCTTCCTGAATGGTaGTGTCCACAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLVLPEW*CPQLHQ
Trigger: CTGGTGTAACTGTGGACATCACCATTCAGGAAGGAC...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGACTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: TAQRLCHISSEYRQILGEPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVEGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTAGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACCACACAAGGCAGACTTaGGAGCTGAATAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHHTRQT*ELNSRW
Trigger: CCATCTGCTATTCAGCTCTCAAGTCTGCCTTGTGTG...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: SLTSLGSLSASKWLLALFLTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGAAATGTAATAGTCTCTaGCCAGCCTGGGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPKCNSL*PAWVAS
Trigger: AGAGGCTACCCAGGCTGGTCAGAGACTATTACATTT...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAGAGAGGCCTGGATACTaGCCACTGGTTCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKERPGY*PLVPTV
Trigger: GACTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTC...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCCATTAGGTTTCTaGAGCACTGGGCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLLPLGF*STGQGP
Trigger: AGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAG...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTACCACCCAGAACTTCTaGCTGGGGCTACATGACTCC +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSATTQNF*LGLHDS
Trigger: GGAGTCATGTAGCCCCAGTCAGAAGTTCTGGGTGGT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGGCCAAACTCTGGAAGTaGAGCGCCATCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLAKLWK*SAIFPG
Trigger: TCCTGGGAAGATGGCGCTGCACTTCCAGAGTTTGGC...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTCCATCCATAGCATCATaGTCATCTGTACTGGTATAT +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSPSIAS*SSVLVY
Trigger: ATATACCAGTACAGATGAGCATGATGCTATGGATGG...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACACCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 4 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCACTGCGCAACGCCTCTaGCACATCTCTTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSTAQRL*HISSEY
Trigger: GTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGACTGCGCAACGCCTCTaGCACATCTCTTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWTAQRL*HISSEY
Trigger: GTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGACTGCGCAACGCCTCTaGCACATCTCTTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLTAQRL*HISSEY
Trigger: GTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GAGTTGTACATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGCAGTGTTGCCATCACTaGGCAACGCCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: ELYMLALHTTVQQHSEEGQCCHH*ATPLPH
Trigger: ATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTG...CCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGACAGACATCATCTGCTaGAGGACATCTGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPTDIIC*RTSGFC
Trigger: GCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGT...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTTGCTGAGACATTCTaGACTGTCAATAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDALAETF*TVNKFQ
Trigger: TTGGAACTTATTGACAGTCCAGAATGTCTCAGCAAG...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACAAAGGGAGCCAGCTTaGGCTGTGATGCCACGTAAT +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVQREPA*AVMPRN
Trigger: ATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTG...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACCAAAGGGAGCCAGCTTaGGCTGTGATGCCACGTAAT +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHQREPA*AVMPRN
Trigger: ATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTG...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTTTCATGATAATTACCTaGATCAGACAAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDAFMIIT*IRQTLR
Trigger: CCTCAGGGTTTGTCTGATCCAGGTAATTATCATGAA...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTCTGCTGCAGGACATCTaGGTTTTGCTGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPLLQDI*VLLHKM
Trigger: CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAG...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAAGGTTTCTGAAGCACTaGGCAAGGACCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVERFLKH*ARTSCL
Trigger: CAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGCATGTCGAGACTGCATaGTTCAGTGTTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPHVETA*FSVAIT
Trigger: AGTGATGGCAACACTGAACCATGCAGTCTCGACATG...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCCAGAGGACTGGGTGCTaGCACCACCCAGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFQRTGC*HHPELL
Trigger: CAGAAGTTCTGGGTGGTGCCAGCACCCAGTCCTCTG...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGCACCTAGAACTGTTTTaGGTAGCCCTAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPHLELF*VALRRQ
Trigger: CTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGCACCTAGAACTGTTTTaGGTAGCCCTAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPHLELF*VALRRQ
Trigger: CTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR CAA 72 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCACATGGTCAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSL*IKAAPHMVRKV
Trigger: GACTTTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHSQLGL*CHVIQN
Trigger: ATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCT...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLSQLGL*CHVIQN
Trigger: ATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCT...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCA +
Preference number: 4 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHNCSNC*NTVAVS
Trigger: TGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTT...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACACATATTCACATCTGCTaGCCGTGCACAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTHIHIC*PCTTAP
Trigger: TGGAGCAGTTGTGCACGGTCAGCAGATGTGAATATG...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCGTCCTTCCTGAATGGTaGTGTCCACAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPVLPEW*CPQLHQ
Trigger: CTGGTGTAACTGTGGACATCACCATTCAGGAAGGAC...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTGTCCTTCCTGAATGGTaGTGTCCACAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTVLPEW*CPQLHQ
Trigger: CTGGTGTAACTGTGGACATCACCATTCAGGAAGGAC...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAGCAAGACGTCCTTCCTaGATGGTGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVEARRPS*MVMSTV
Trigger: AACTGTGGACATCACCATTCAGGAAGGACGTCTTGC...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACACTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: KFILIFTQIYHQKASERCGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGAAGCTCATATGGTCCTaGGTGAGACATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWKLIWS*VRHSRS
Trigger: ACTCCTGGAATGTCTCACTCAGGACCATATGAGCTT...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCAAGCTCATATGGTCCTaGGTGAGACATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSKLIWS*VRHSRS
Trigger: ACTCCTGGAATGTCTCACTCAGGACCATATGAGCTT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTACCTGTCTCTGTTCTTaGCGGACAGGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSATCLCS*RTGSAP
Trigger: TGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTACCTGTCTCTGTTCTTaGCGGACAGGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KFILIFTQIYHQKASERCTCLCS*RTGSAP
Trigger: TGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGT...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGAGACAATGGTGTTCATaGGGACAGACATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPRQWCS*GQTSSA
Trigger: AGCAGATGATGTCTGTCCTCATGAACACCATTGTCT...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCTTGAGCCCAGGAGTTTaGGTCCAGCCTGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: VEGCSTPEVAETMIVTDALSPGV*VQPEQH
Trigger: ATGTTGCTCAGGCTGGACTCAAACTCCTGGGCTCAA...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp CATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGGCCAAACTCTGGAAGTaGAGCGCCATCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HEDRHHLLQDIWVLLHKMAKLWK*SAIFPG
Trigger: TCCTGGGAAGATGGCGCTGCACTTCCAGAGTTTGGC...CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTTTGGAATCTGCACCGTaGAAAGATCATCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPLESAP*KDHLQI
Trigger: AATCTGCAGATGATCTTTGCACGGTGCAGATTCCAA...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCACTGCGCAACGCCTCTaGCACATCTCTTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFTAQRL*HISSEY
Trigger: GTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCCAGTGTTGCCATCACTaGGCAACGCCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFQCCHH*ATPLPH
Trigger: ATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTG...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATTGCATGGTTCAGTGTTaGCATCACTGCGCAACGCCT +
Preference number: 4 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDCMVQC*HHCATP
Trigger: AGGCGTTGCGCAGTGATGGCAACACTGAACCATGCA...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCAGGACAGACATCATCTaGTGCAGGACATCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVRTDII*CRTSGF
Trigger: AAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCT...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCAGGACAGACATCATCTaGTGCAGGACATCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSRTDII*CRTSGF
Trigger: AAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGTGTGGTCCTGTGGGATaGTCTGTAGTGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLCGPVG*SVVLPG
Trigger: GCCTGGAAGCACTACAGAGCATCCCACAGGACCACA...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTTGTTCCACAGTACCCTaGAGAAACTTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPCSTVP*RNFFTS
Trigger: TGATGTGAAGAAGTTTCTCCAGGGTACTGTGGAACA...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACCTCTCTGCATCGAAGTaGCTTCTTGCCCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHLSASK*LLALFC
Trigger: GCAAAAGAGGGCAAGAAGCCACTTCGATGCAGAGAG...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGCCCCAGGAGAGGCCTaGATACTGACCACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: MVVPIQLEDAKADIISTQAPGEA*ILTTGS
Trigger: GGAACCAGTGGTCAGTATCCAGGCCTCTCCTGGGGC...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTCAAGGACCTCCTGCTTaGGGAGGGGCTGGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFQGPPA*GGAGCL
Trigger: TAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTG...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTACAAGGACCTCCTGCTTaGGGAGGGGCTGGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: PRRSLASPINIRFTSSCLQGPPA*GGAGCL
Trigger: TAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTG...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCATGGAGGCAGAGGACTaGGTGCTGGCACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: VPNAASSRHITNYSFNRFMEAED*VLAPPR
Trigger: TCTGGGTGGTGCCAGCACCCAGTCCTCTGCCTCCAT...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
3UTR CAA 72 bp GAGGGGCCTGGCATCCCTCTGTGCACAGAGCTGGTATaGTCACAGTGTAATAAGGATACATCCAGTCAAACA +
Preference number: 4 (lower is better)
Translates to: EGPGIPLCTELV*SQCNKDTSSQT
Trigger: TGTTTGACTGGATGTATCCTTATTACACTGTGACAATACCAGCTCTGTGCACAGAGGGATGCCAGGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VEGCSTPEVAETMIVTDASQLGL*CHVIQN
Trigger: ATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCT...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCA +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHNCSNC*NTVAVS
Trigger: TGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTT...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGAAACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAACATATTCACATCTGCTaGCCGTGCACAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GNMVKLHLLQDIWVLLHKHIHIC*PCTTAP
Trigger: TGGAGCAGTTGTGCACGGTCAGCAGATGTGAATATG...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR TCA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTCCTTCCTGAATGGTaGTGTCCACAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSVLPEW*CPQLHQ
Trigger: CTGGTGTAACTGTGGACATCACCATTCAGGAAGGAC...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFRSTAF*RRGRYV
Trigger: AACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACG...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCACACACAAGGCAGACTTaGGAGCTGAATAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSHTRQT*ELNSRW
Trigger: CCATCTGCTATTCAGCTCTCAAGTCTGCCTTGTGTG...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTCACACAAGGCAGACTTaGGAGCTGAATAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAHTRQT*ELNSRW
Trigger: CCATCTGCTATTCAGCTCTCAAGTCTGCCTTGTGTG...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWLTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHLTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAAAGCTCATATGGTCCTaGGTGAGACATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVEKLIWS*VRHSRS
Trigger: ACTCCTGGAATGTCTCACTCAGGACCATATGAGCTT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGAGTAGTGAGTCCCTCTaGGATAGATGTGAGAACATA +
Preference number: 4 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPSSESL*DRCENI
Trigger: TATGTTCTCACATCTATCTCAGAGGGACTCACTACT...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTCTTCCATTAGGTTTCTaGAGCACTGGGCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSALPLGF*STGQGP
Trigger: AGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAG...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTGTCTCTGTTCTTaGCGGACAGGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTTCLCS*RTGSAP
Trigger: TGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGT...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCCTGCCACATCTCTTCTaGATACAGACAGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSLPHLF*IQTDFG
Trigger: CCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAG...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCCTGATGTCCATCCTCTaGTCAACAGGTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPLMSIL*STGKGL
Trigger: CAGTCCTTTACCTGTTGAGCAGAGGATGGACATCAG...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTAGGACATCTGGGTTTTaGTGCATAAAATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSRTSGF*CIKCNS
Trigger: ACTATTACATTTTATGCAGCAAAACCCAGATGTCCT...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTCCAAGGTGGGCAGATTaGTTGAGTTCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTPRWAD*LSSGVR
Trigger: TCGAACTCCTGAACTCAAGCAATCTGCCCACCTTGG...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR GCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGATCATCATGTCGAGACTaGATGGTTCAGTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRSSCRD*MVQCCH
Trigger: ATGGCAACACTGAACCATGCAGTCTCGACATGATGA...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGTCATCATGTCGAGACTaGATGGTTCAGTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLSSCRD*MVQCCH
Trigger: ATGGCAACACTGAACCATGCAGTCTCGACATGATGA...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCCTGTCTTCTTCCATCTaGTCCAGTTTGAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVLSSSI*SSLNWL
Trigger: CAACCAGTTCAAACTGGAGCAGATGGAAGAAGACAG...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR CCA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTCTTGCTGAGACATTCTaGACTGTCAATAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: ETAWFSVAITAQRLCHISLAETF*TVNKFQ
Trigger: TTGGAACTTATTGACAGTCCAGAATGTCTCAGCAAG...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTCTTGCTGAGACATTCTaGACTGTCAATAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPLAETF*TVNKFQ
Trigger: TTGGAACTTATTGACAGTCCAGAATGTCTCAGCAAG...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAGATCTCTCACAACTATaGCAACAGAGTCCAACCGAG +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTDLSQL*QQSPTE
Trigger: CTCGGTTGGACTCTGTTGCCATAGTTGTGAGAGATC...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTTCAAAATTCAAACGCTaGGATCTGTTTTGCATAAGT +
Preference number: 4 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDASKFKR*DLFCIS
Trigger: ACTTATGCAAAACAGATCCCAGCGTTTGAATTTTGA...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCAACTGGTACAGCAGCTaGAGGAGACAACTGTATCAA +
Preference number: 4 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVNWYSS*RRQLYQ
Trigger: TTGATACAGTTGTCTCCTCCAGCTGCTGTACCAGTT...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTTGCTTGGGGAGGGGCTaGCTGTTTATCAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTCLGRG*LFIKLA
Trigger: AGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCA...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGGAGCCACGCAAGGCCTaGACCTTAGACTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLEEPRKA*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGCCTTGCGTGGCTC...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519256.5
CDS-3UTR CCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCCTCAGGCGTACAACCTaGACCTTAGACTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: AQTVKVFFMFWVWGESESLRRTT*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGTTGTACGCCTGAG...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519949.5
CDS-3UTR CCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGCAGAGGACTGGGTGCTaGCACCACCCAGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTQRTGC*HHPELL
Trigger: CAGAAGTTCTGGGTGGTGCCAGCACCCAGTCCTCTG...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAGAGGACTGGGTGCTaGCACCACCCAGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: VPNAASSRHITNYSFNRFQRTGC*HHPELL
Trigger: CAGAAGTTCTGGGTGGTGCCAGCACCCAGTCCTCTG...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTCACCTAGAACTGTTTTaGGTAGCCCTAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLHLELF*VALRRQ
Trigger: CTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGGTCTTCTTCATGTTCTaGGTTTGGGGTGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLVFFMF*VWGESE
Trigger: TTCTGACTCACCCCAAACCCAGAACATGAAGAAGAC...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
3UTR CAA 72 bp CGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGGAAGATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSQGRRNPSWIG*PQALHRKMSVF
Trigger: GAAGACAGACATCTTCCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR TCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCAAAGTTGACACTTGCTaGGACATTCTGGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSKVDTC*DILDCQ
Trigger: TTGACAGTCCAGAATGTCTCAGCAAGTGTCAACTTT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCACAAATTGGTCTTTCTaGACCTCAAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPTNWSF*TSNHPN
Trigger: GTTGGGGTGGTTTGAGGTTCAGAAAGACCAATTTGT...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTTTTCCTGTGTTTTGCTaGAGGTCTAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: SLTSLGSLSASKWLLALFFPVFC*RSRIIN
Trigger: GTTGATTATTCTAGACCTTCAGCAAAACACAGGAAA...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTTTTCCTGTGTTTTGCTaGAGGTCTAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPFPVFC*RSRIIN
Trigger: GTTGATTATTCTAGACCTTCAGCAAAACACAGGAAA...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCCATGAAAGTGCTAACTaGGATAGTAGTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSHESAN*DSSGGS
Trigger: ACTTCCACCACTACTATCTCAGTTAGCACTTTCATG...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCC...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCA +
Preference number: 4 (lower is better)
Translates to: KFILIFTQIYHQKASERCNCSNC*NTVAVS
Trigger: TGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTT...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCA +
Preference number: 4 (lower is better)
Translates to: VEGCSTPEVAETMIVTDANCSNC*NTVAVS
Trigger: TGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTT...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCCATATTCACATCTGCTaGCCGTGCACAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IRSFSRKKKPELDRFATSHIHIC*PCTTAP
Trigger: TGGAGCAGTTGTGCACGGTCAGCAGATGTGAATATG...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCGTCCTTCCTGAATGGTaGTGTCCACAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFVLPEW*CPQLHQ
Trigger: CTGGTGTAACTGTGGACATCACCATTCAGGAAGGAC...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTGCAAGACGTCCTTCCTaGATGGTGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVARRPS*MVMSTV
Trigger: AACTGTGGACATCACCATTCAGGAAGGACGTCTTGC...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGGCAAGACGTCCTTCCTaGATGGTGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: HEDRHHLLQDIWVLLHKMARRPS*MVMSTV
Trigger: AACTGTGGACATCACCATTCAGGAAGGACGTCTTGC...CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: IRSFSRKKKPELDRFATSLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: TAQRLCHISSEYRQILGERSTAF*RRGRYV
Trigger: AACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACG...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGCACACAAGGCAGACTTaGGAGCTGAATAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLHTRQT*ELNSRW
Trigger: CCATCTGCTATTCAGCTCTCAAGTCTGCCTTGTGTG...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAGAGAGGCCTGGATACTaGCCACTGGTTCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKERPGY*PLVPTV
Trigger: GACTGTCGGAACCAGTGGTCAGTATCCAGGCCTCTC...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATCCAACATCACTGTCCTaGGACCCAGACCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HLELFWVALRRQSCFKYYPTSLS*DPDLQE
Trigger: CTCCTGAAGGTCTGGGTCTCAGGACAGTGATGTTGG...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACTGACTGGGGCTACATaGCTCCTCCTGAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: TAQRLCHISSEYRQILGELTGAT*LLLKKY
Trigger: ATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAG...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTCTGACTGGGGCTACATaGCTCCTCCTGAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: KFILIFTQIYHQKASERCLTGAT*LLLKKY
Trigger: ATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAG...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCACCACCCAGAACTTCTaGCTGGGGCTACATGACTCC +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVTTQNF*LGLHDS
Trigger: GGAGTCATGTAGCCCCAGTCAGAAGTTCTGGGTGGT...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGGTTCTGGGTTTGGGGTaGGTCAGAATCCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLEVLGLG*VRIPSP
Trigger: GGGACTTGGGATTCTGACTCACCCCAAACCCAGAAC...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTCTGATGTCCATCCTCTaGTCAACAGGTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTLMSIL*STGKGL
Trigger: CAGTCCTTTACCTGTTGAGCAGAGGATGGACATCAG...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVEIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAACAGTGTTGCCATCACTaGGCAACGCCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: MVVPIQLEDAKADIISTQQCCHH*ATPLPH
Trigger: ATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTG...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTAGGACAGACATCATCTaGTGCAGGACATCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSARTDII*CRTSGF
Trigger: AAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPSLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAATGTGGTCCTGTGGGATaGTCTGTAGTGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MVVPIQLEDAKADIISTQCGPVG*SVVLPG
Trigger: GCCTGGAAGCACTACAGAGCATCCCACAGGACCACA...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACCTGGCATCCCTCTGTaGACAGAGCTGGTATTGTCA +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPPGIPL*TELVLS
Trigger: TGACAATACCAGCTCTGTGCACAGAGGGATGCCAGG...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGGTTCTCCCTAAAACATaGCTAGATCCCCTATTAGTT +
Preference number: 4 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPVLPKT*LDPLLV
Trigger: AACTAATAGGGGATCTAGGCATGTTTTAGGGAGAAC...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CCA 90 bp GAGTTGTACATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGAATTCAGCCAAACTCTaGAAGTGCAGCGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ELYMLALHTTVQQHSEEGNSAKL*KCSAIF
Trigger: GAAGATGGCGCTGCACTTCCAGAGTTTGGCTGAATT...CCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTAATTCAGCCAAACTCTaGAAGTGCAGCGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSANSAKL*KCSAIF
Trigger: GAAGATGGCGCTGCACTTCCAGAGTTTGGCTGAATT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCCAAAGGGAGCCAGCTTaGGCTGTGATGCCACGTAAT +
Preference number: 4 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCQREPA*AVMPRN
Trigger: ATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTG...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTGTTCCACAGTACCCTaGAGAAACTTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSCSTVP*RNFFTS
Trigger: TGATGTGAAGAAGTTTCTCCAGGGTACTGTGGAACA...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGATCTCTCACAACTATaGCAACAGAGTCCAACCGAG +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSADLSQL*QQSPTE
Trigger: CTCGGTTGGACTCTGTTGCCATAGTTGTGAGAGATC...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 4 (lower is better)
Translates to: HEDRHHLLQDIWVLLHKMGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCAACTGGTACAGCAGCTaGAGGAGACAACTGTATCAA +
Preference number: 4 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFNWYSS*RRQLYQ
Trigger: TTGATACAGTTGTCTCCTCCAGCTGCTGTACCAGTT...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCTGCTGCAGGACATCTaGGTTTTGCTGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTLLQDI*VLLHKM
Trigger: CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAG...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAACTGCTGCAGGACATCTaGGTTTTGCTGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVELLQDI*VLLHKM
Trigger: CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAG...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTGCTTGGGGAGGGGCTaGCTGTTTATCAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVCLGRG*LFIKLA
Trigger: AGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCA...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAACAAGGACCTCCTGCTTaGGGAGGGGCTGGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKQGPPA*GGAGCL
Trigger: TAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTG...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATCAAGGACCTCCTGCTTaGGGAGGGGCTGGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: PRTVLGSPKKAELLQILYQGPPA*GGAGCL
Trigger: TAAACAGCCAGCCCCTCCCCAAGCAGGAGGTCCTTG...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTAGGTTTCTGAAGCACTaGGCAAGGACCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFRFLKH*ARTSCL
Trigger: CAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCT...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTCATGTCGAGACTGCATaGTTCAGTGTTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAHVETA*FSVAIT
Trigger: AGTGATGGCAACACTGAACCATGCAGTCTCGACATG...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTCCTTCTCTGGAACTCTaGGTACATCACTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSPSLEL*VHHSSG
Trigger: GCCTGAGGAGTGATGTACCCAGAGTTCCAGAGAAGG...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519256.5
ENST00000519949.5
CDS-3UTR CCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTCCTTCTCTGGAACTCTaGGTACATCACTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFPSLEL*VHHSSG
Trigger: GCCTGAGGAGTGATGTACCCAGAGTTCCAGAGAAGG...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519256.5
ENST00000519949.5
CDS-3UTR CCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCAGGCTGCTCCGCACATaGTCAGAAAAGTCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VPNAASSRHITNYSFNRFRLLRT*SEKSGQ
Trigger: CTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCT...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGAAAAATACATTCCCCTaGGCTAGCCAACATCACTGT +
Preference number: 4 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLKNTFP*ASQHHC
Trigger: ACAGTGATGTTGGCTAGCCCAGGGGAATGTATTTTT...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGGAGGCCTGCGTGTaGTCCTGTGGGATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSREACV*SCGMLC
Trigger: ACAGAGCATCCCACAGGACCACACGCAGGCCTCCCT...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACCCAGAACTTCTGACTaGGGCTACATGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPPRTSD*GYMTPP
Trigger: AGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGG...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTATTCATGTTCTGGGTTTaGGGTGAGTCAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVFMFWV*GESESQ
Trigger: TTGGGATTCTGACTCACCCCAAACCCAGAACATGAA...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAGTCTTCTTCATGTTCTaGGTTTGGGGTGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVEVFFMF*VWGESE
Trigger: TTCTGACTCACCCCAAACCCAGAACATGAAGAAGAC...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWSQLGL*CHVIQN
Trigger: ATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGAAACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAACAAATTGGTCTTTCTaGACCTCAAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: GNMVKLHLLQDIWVLLHKTNWSF*TSNHPN
Trigger: GTTGGGGTGGTTTGAGGTTCAGAAAGACCAATTTGT...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR TCA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTACAAATTGGTCTTTCTaGACCTCAAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: KFILIFTQIYHQKASERCTNWSF*TSNHPN
Trigger: GTTGGGGTGGTTTGAGGTTCAGAAAGACCAATTTGT...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGTTTCCTGTGTTTTGCTaGAGGTCTAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPFPVFC*RSRIIN
Trigger: GTTGATTATTCTAGACCTTCAGCAAAACACAGGAAA...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTAGAAGTATCACGAAATaGGGTAGCTATTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVRSITK*GSYFPV
Trigger: CACAGGAAAATAGCTACCTCATTTCGTGATACTTCT...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACGCACTAAAACGTCTTTaGGAGAAGTATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHALKRL*EKYHEM
Trigger: CATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGC...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTTGCAGATTCATCTGCTaGACTGCCAATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTCRFIC*TANEVK
Trigger: TTTGACTTCATTGGCAGTTCAGCAGATGAATCTGCA...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGAAACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: GNMVKLHLLQDIWVLLHKGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCC...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR TCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCA +
Preference number: 4 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWNCSNC*NTVAVS
Trigger: TGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTT...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTGTCCTTCCTGAATGGTaGTGTCCACAGTTACACCAG +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFVLPEW*CPQLHQ
Trigger: CTGGTGTAACTGTGGACATCACCATTCAGGAAGGAC...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTGCAAGACGTCCTTCCTaGATGGTGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSARRPS*MVMSTV
Trigger: AACTGTGGACATCACCATTCAGGAAGGACGTCTTGC...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAGCAAGACGTCCTTCCTaGATGGTGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIARRPS*MVMSTV
Trigger: AACTGTGGACATCACCATTCAGGAAGGACGTCTTGC...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTACTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: PRRSLASPINIRFTSSCLLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 4 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 4 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGAAACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: GNMVKLHLLQDIWVLLHKINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR TCA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCGGCAGACTTGAGAGCTaGATAGCAGATGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: VPNAASSRHITNYSFNRFGRLES*IADGDA
Trigger: GGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCGTCACTGTGGGACACTaGCAGCAGCATTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: AQTVKVFFMFWVWGESESVTVGH*QQHFDK
Trigger: TTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGAC...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GTCAAAATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACCTGTCTCTGTTCTTaGCGGACAGGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VKMVVPIQLEDAKADIISTCLCS*RTGSAP
Trigger: TGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGT...GGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGTTCTGGGTTTGGGGTaGGTCAGAATCCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKVLGLG*VRIPSP
Trigger: GGGACTTGGGATTCTGACTCACCCCAAACCCAGAAC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAACCATCTGCTCCAGTTTaGACTGGTTGCTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGEPSAPV*TGCSQG
Trigger: GCCTTGAGAGCAACCAGTTCAAACTGGAGCAGATGG...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR TCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCCCAGCCTTGCTAATTaGGATGGAGATTCAAATCTC +
Preference number: 4 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDPSLAN*DGDSNL
Trigger: GAGATTTGAATCTCCATCTCAATTAGCAAGGCTGGG...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGAGCTTCTGGCATAACTaGCACTTCTCTCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKSFWHN*HFSPPL
Trigger: CAGGGGCGGAGAGAAGTGTCAGTTATGCCAGAAGCT...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCCAAACTCTGGAAGTaGAGCGCCATCTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKAKLWK*SAIFPG
Trigger: TCCTGGGAAGATGGCGCTGCACTTCCAGAGTTTGGC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CTGGAGGAGACAACTGTATCAAGAGTAGTGAGTCCCTCTGAGATAGATGTGAGACTGATGTCCATCCTCTaGTCAACAGGTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: LEETTVSRVVSPSEIDVRLMSIL*STGKGL
Trigger: CAGTCCTTTACCTGTTGAGCAGAGGATGGACATCAG...TCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCTGATGTCCATCCTCTaGTCAACAGGTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNLMSIL*STGKGL
Trigger: CAGTCCTTTACCTGTTGAGCAGAGGATGGACATCAG...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGTTTTGGTCGAATAACTaGACAAGAAGAGCACATGTC +
Preference number: 4 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWFWSNN*TRRAHV
Trigger: GACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACTTTTGGTCGAATAACTaGACAAGAAGAGCACATGTC +
Preference number: 4 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHFWSNN*TRRAHV
Trigger: GACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTTTTTGGTCGAATAACTaGACAAGAAGAGCACATGTC +
Preference number: 4 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVFWSNN*TRRAHV
Trigger: GACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGACCATCCATAGCATCATaGTCATCTGTACTGGTATAT +
Preference number: 4 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRPSIAS*SSVLVY
Trigger: ATATACCAGTACAGATGAGCATGATGCTATGGATGG...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 4 (lower is better)
Translates to: HLELFWVALRRQSCFKYYPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCCCTCGAAGATCTCTTaGCAGCCCGATCAACATACG +
Preference number: 4 (lower is better)
Translates to: VPNAASSRHITNYSFNRFPSKIS*QPDQHT
Trigger: CGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGG...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCTGCATGGTTCAGTGTTaGCATCACTGCGCAACGCCT +
Preference number: 4 (lower is better)
Translates to: VPNAASSRHITNYSFNRFCMVQC*HHCATP
Trigger: AGGCGTTGCGCAGTGATGGCAACACTGAACCATGCA...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGACAGACATCATCTGCTaGAGGACATCTGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLTDIIC*RTSGFC
Trigger: GCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGT...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTAATCCATGGTGAAGGCTaGATCTCCAACAAATTGACA +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVIHGEG*ISNKLT
Trigger: TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGAT...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCCAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGACAAAGGGAGCCAGCTTaGGCTGTGATGCCACGTAAT +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRQREPA*AVMPRN
Trigger: ATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTG...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCCAAAGGGAGCCAGCTTaGGCTGTGATGCCACGTAAT +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTQREPA*AVMPRN
Trigger: ATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTG...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGTGTTCTCCAAGTTGTTaGAATCTGCACCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLCSPSC*NLHRAK
Trigger: CTTTGCACGGTGCAGATTCCAACAACTTGGAGAACA...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTAAGATCCAATGTTTCTaGTTCCAGGAAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: ETAWFSVAITAQRLCHISKIQCF*FQENCS
Trigger: AGAACAATTTTCCTGGAACCAGAAACATTGGATCTT...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCTTCATGATAATTACCTaGATCAGACAAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSFMIIT*IRQTLR
Trigger: CCTCAGGGTTTGTCTGATCCAGGTAATTATCATGAA...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCGATCTCTCACAACTATaGCAACAGAGTCCAACCGAG +
Preference number: 4 (lower is better)
Translates to: AQTVKVFFMFWVWGESESDLSQL*QQSPTE
Trigger: CTCGGTTGGACTCTGTTGCCATAGTTGTGAGAGATC...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTATACGAGCATATACCTaGACCTTAGACTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAIRAYT*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGTATATGCTCGTAT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: VEGCSTPEVAETMIVTDASSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSASSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTGGAGGAGACAACTGTATCAAGAGTAGTGAGTCCCTCTGAGATAGATGTGAGAAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: LEETTVSRVVSPSEIDVRKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...TCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAATGTAGCAAGTCACTGTaGGACACTGACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKCSKSL*DTDSSI
Trigger: AATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACA...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCCTCTCTGCATCGAAGTaGCTTCTTGCCCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCLSASK*LLALFC
Trigger: GCAAAAGAGGGCAAGAAGCCACTTCGATGCAGAGAG...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTGCTTGGGGAGGGGCTaGCTGTTTATCAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFCLGRG*LFIKLA
Trigger: AGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCA...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCAATACAGACAGATTTTaGGTGAACCTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSNTDRF*VNLSLF
Trigger: GAACAGAGACAGGTTCACCCAAAATCTGTCTGTATT...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACAAAAATACATTCCCCTaGGCTAGCCAACATCACTGT +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHKNTFP*ASQHHC
Trigger: ACAGTGATGTTGGCTAGCCCAGGGGAATGTATTTTT...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATCCCAGAACTTCTGACTaGGGCTACATGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HLELFWVALRRQSCFKYYPRTSD*GYMTPP
Trigger: AGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGG...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCCCCAGAACTTCTGACTaGGGCTACATGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTPRTSD*GYMTPP
Trigger: AGGAGGAGTCATGTAGCCCCAGTCAGAAGTTCTGGG...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTCCAAACCACCCCATTTaGCAATCTAACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAPNHPI*QSNTAS
Trigger: AGAAGCTGTGTTAGATTGCCAAATGGGGTGGTTTGG...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CCA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAATTATGAAAAGCCCTTaGCCTTTTCCCAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ILIFTQIYHQKASERCVEIMKSP*PFPKEA
Trigger: AGCTTCCTTGGGAAAAGGCCAAGGGCTTTTCATAAT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACTTTCCTGTGTTTTGCTaGAGGTCTAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHFPVFC*RSRIIN
Trigger: GTTGATTATTCTAGACCTTCAGCAAAACACAGGAAA...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTAGAAGTATCACGAAATaGGGTAGCTATTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLRSITK*GSYFPV
Trigger: CACAGGAAAATAGCTACCTCATTTCGTGATACTTCT...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTGGAACTCTGGGTACATCACTCCTCAGGCGTACAACTGGGCATAGGAGATTTTAGAAGTATCACGAAATaGGGTAGCTATTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LELWVHHSSGVQLGIGDFRSITK*GSYFPV
Trigger: CACAGGAAAATAGCTACCTCATTTCGTGATACTTCT...AAAATCTCCTATGCCCAGTTGTACGCCTGAGGAGTGATGTACCCAGAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519256.5
CDS-3UTR TCA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTGCACTAAAACGTCTTTaGGAGAAGTATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLALKRL*EKYHEM
Trigger: CATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGC...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTTGCAGATTCATCTGCTaGACTGCCAATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSACRFIC*TANEVK
Trigger: TTTGACTTCATTGGCAGTTCAGCAGATGAATCTGCA...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTCATGAAAGTGCTAACTaGGATAGTAGTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTHESAN*DSSGGS
Trigger: ACTTCCACCACTACTATCTCAGTTAGCACTTTCATG...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCC...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCA +
Preference number: 4 (lower is better)
Translates to: PRRSLASPINIRFTSSCLNCSNC*NTVAVS
Trigger: TGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTT...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGACATATTCACATCTGCTaGCCGTGCACAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRHIHIC*PCTTAP
Trigger: TGGAGCAGTTGTGCACGGTCAGCAGATGTGAATATG...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCCTGGACCTTAGACTGTaGTCCCTGGTTCAGATGATG +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTLDLRL*SLVQMM
Trigger: CATCATCTGAACCAGGGATCACAGTCTAAGGTCCAG...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 4 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: IRSFSRKKKPELDRFATSKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAACACACAAGGCAGACTTaGGAGCTGAATAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: MVVPIQLEDAKADIISTQHTRQT*ELNSRW
Trigger: CCATCTGCTATTCAGCTCTCAAGTCTGCCTTGTGTG...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNLTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTGTCACTGTGGGACACTaGCAGCAGCATTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSVTVGH*QQHFDK
Trigger: TTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGAC...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTAAGCTCATATGGTCCTaGGTGAGACATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFKLIWS*VRHSRS
Trigger: ACTCCTGGAATGTCTCACTCAGGACCATATGAGCTT...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGAGTAGTGAGTCCCTCTaGGATAGATGTGAGAACATA +
Preference number: 4 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLSSESL*DRCENI
Trigger: TATGTTCTCACATCTATCTCAGAGGGACTCACTACT...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGACTTCCATTAGGTTTCTaGAGCACTGGGCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRLPLGF*STGQGP
Trigger: AGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAG...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCCTTCCATTAGGTTTCTaGAGCACTGGGCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVLPLGF*STGQGP
Trigger: AGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAG...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAACCTGTCTCTGTTCTTaGCGGACAGGTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWITCLCS*RTGSAP
Trigger: TGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGT...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCCTGCCACATCTCTTCTaGATACAGACAGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFLPHLF*IQTDFG
Trigger: CCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAG...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGCTGCCACATCTCTTCTaGATACAGACAGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLLPHLF*IQTDFG
Trigger: CCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAG...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAAGACAATGGTGTTCATaGGGACAGACATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTRQWCS*GQTSSA
Trigger: AGCAGATGATGTCTGTCCTCATGAACACCATTGTCT...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGTTCTGGGTTTGGGGTaGGTCAGAATCCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQVLGLG*VRIPSP
Trigger: GGGACTTGGGATTCTGACTCACCCCAAACCCAGAAC...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CTGGAGGAGACAACTGTATCAAGAGTAGTGAGTCCCTCTGAGATAGATGTGAGACTGTGTTTGATCCTCTaGTTCTCAGATCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LEETTVSRVVSPSEIDVRLCLIL*FSDPIS
Trigger: AGAGATGGGATCTGAGAATCAGAGGATCAAACACAG...TCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR TCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACTCAGACAGGTGAAATaGCTTGCCAAGGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPLRQVK*LAKVHN
Trigger: GTTGTGAACCTTGGCAAGTCATTTCACCTGTCTGAG...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTCTGATGTCCATCCTCTaGTCAACAGGTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSLMSIL*STGKGL
Trigger: CAGTCCTTTACCTGTTGAGCAGAGGATGGACATCAG...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGTTATTACTCCTATTATaGAGTGTTCCACAGTACCCT +
Preference number: 4 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWLLLLL*SVPQYP
Trigger: AGGGTACTGTGGAACACTGCATAATAGGAGTAATAA...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTTTGGAATCTGCACCGTaGAAAGATCATCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTLESAP*KDHLQI
Trigger: AATCTGCAGATGATCTTTGCACGGTGCAGATTCCAA...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTTTTGGTCGAATAACTaGACAAGAAGAGCACATGTC +
Preference number: 4 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHFWSNN*TRRAHV
Trigger: GACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACCATCCATAGCATCATaGTCATCTGTACTGGTATAT +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVPSIAS*SSVLVY
Trigger: ATATACCAGTACAGATGAGCATGATGCTATGGATGG...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCCCATCCATAGCATCATaGTCATCTGTACTGGTATAT +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPPSIAS*SSVLVY
Trigger: ATATACCAGTACAGATGAGCATGATGCTATGGATGG...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: IRSFSRKKKPELDRFATSIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAAACTGCGCAACGCCTCTaGCACATCTCTTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGETAQRL*HISSEY
Trigger: GTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCCAGTGTTGCCATCACTaGGCAACGCCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSQCCHH*ATPLPH
Trigger: ATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTG...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCTCATCATGTCGAGACTaGATGGTTCAGTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: IRSFSRKKKPELDRFATSSSCRD*MVQCCH
Trigger: ATGGCAACACTGAACCATGCAGTCTCGACATGATGA...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGTCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLSLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCTCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: AQTVKVFFMFWVWGESESSLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCTCAGTTATCTGCTCTaGTGCCACTGTGCTGTAATT +
Preference number: 4 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNLSYLL*CHCAVI
Trigger: AATTACAGCACAGTGGCAGCAGAGCAGATAACTGAG...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTCCGTTTGCTATTTTCTaGCATCTGCTGGACAAAAGT +
Preference number: 4 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTPFAIF*HLLDKS
Trigger: ACTTTTGTCCAGCAGATGGCAGAAAATAGCAAACGG...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGCAAAGGGAGCCAGCTTaGGCTGTGATGCCACGTAAT +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKQREPA*AVMPRN
Trigger: ATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTG...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCAAAGGGAGCCAGCTTaGGCTGTGATGCCACGTAAT +
Preference number: 4 (lower is better)
Translates to: NAASSRHITNYSFNRFQWQREPA*AVMPRN
Trigger: ATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTG...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCTGTTCTCCAAGTTGTTaGAATCTGCACCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFCSPSC*NLHRAK
Trigger: CTTTGCACGGTGCAGATTCCAACAACTTGGAGAACA...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGTGTTCTCCAAGTTGTTaGAATCTGCACCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLCSPSC*NLHRAK
Trigger: CTTTGCACGGTGCAGATTCCAACAACTTGGAGAACA...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGAAGATCCAATGTTTCTaGTTCCAGGAAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPKIQCF*FQENCS
Trigger: AGAACAATTTTCCTGGAACCAGAAACATTGGATCTT...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTATTCATGATAATTACCTaGATCAGACAAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVFMIIT*IRQTLR
Trigger: CCTCAGGGTTTGTCTGATCCAGGTAATTATCATGAA...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATTCATGATAATTACCTaGATCAGACAAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTFMIIT*IRQTLR
Trigger: CCTCAGGGTTTGTCTGATCCAGGTAATTATCATGAA...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGATACGAGCATATACCTaGACCTTAGACTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLIRAYT*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGTATATGCTCGTAT...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 4 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTATGTAGCAAGTCACTGTaGGACACTGACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: PRRSLASPINIRFTSSCLCSKSL*DTDSSI
Trigger: AATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACA...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCCTCTCTGCATCGAAGTaGCTTCTTGCCCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTLSASK*LLALFC
Trigger: GCAAAAGAGGGCAAGAAGCCACTTCGATGCAGAGAG...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCTGCTTGGGGAGGGGCTaGCTGTTTATCAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVCLGRG*LFIKLA
Trigger: AGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCA...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCAATACAGACAGATTTTaGGTGAACCTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFNTDRF*VNLSLF
Trigger: GAACAGAGACAGGTTCACCCAAAATCTGTCTGTATT...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCTTTCCAAGCCTTCTCTaGAACTCTGGGTACATCACT +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFFPSLL*NSGYIT
Trigger: AGTGATGTACCCAGAGTTCCAGAGAAGGCTTGGAAA...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519256.5
ENST00000519949.5
CDS-3UTR CCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTAGTTTAGGTGCATCCTaGACCTTAGACTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSSLGAS*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGATGCACCTAAACT...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518492.1
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCTGCTCCAGTTTGAACTaGTTGCTCTCAAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVCSSLN*LLSRPE
Trigger: CTCAGGCCTTGAGAGCAACCAGTTCAAACTGGAGCA...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR CCA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAGTGACTTCTCTGAGCTaGGTCTCCAAATACTGTGCT +
Preference number: 4 (lower is better)
Translates to: PRRSLASPINIRFTSSCLVTSLS*VSKYCA
Trigger: AGCACAGTATTTGGAGACCCAGCTCAGAGAAGTCAC...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CAA 72 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTaGCCAGCCCGATCAACATACGCTTTACATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDL*PARSTYALHLL
Trigger: AAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGAAAGTTGACACTTGCTaGGACATTCTGGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWKVDTC*DILDCQ
Trigger: TTGACAGTCCAGAATGTCTCAGCAAGTGTCAACTTT...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCAAAGTTGACACTTGCTaGGACATTCTGGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: IRSFSRKKKPELDRFATSKVDTC*DILDCQ
Trigger: TTGACAGTCCAGAATGTCTCAGCAAGTGTCAACTTT...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTACAAATTGGTCTTTCTaGACCTCAAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFTNWSF*TSNHPN
Trigger: GTTGGGGTGGTTTGAGGTTCAGAAAGACCAATTTGT...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTAGAAGTATCACGAAATaGGGTAGCTATTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSARSITK*GSYFPV
Trigger: CACAGGAAAATAGCTACCTCATTTCGTGATACTTCT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGCACTAAAACGTCTTTaGGAGAAGTATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAALKRL*EKYHEM
Trigger: CATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGC...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCA +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTNCSNC*NTVAVS
Trigger: TGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTT...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAACATATTCACATCTGCTaGCCGTGCACAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKHIHIC*PCTTAP
Trigger: TGGAGCAGTTGTGCACGGTCAGCAGATGTGAATATG...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCAAGACGTCCTTCCTaGATGGTGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKARRPS*MVMSTV
Trigger: AACTGTGGACATCACCATTCAGGAAGGACGTCTTGC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGGATGTCTGTCTTCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLDVCLL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGAAGACAGACATC...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGCGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTRSTAF*RRGRYV
Trigger: AACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACG...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: VPNAASSRHITNYSFNRFRSTAF*RRGRYV
Trigger: AACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACG...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCAATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGAAACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 4 (lower is better)
Translates to: GNMVKLHLLQDIWVLLHKRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR TCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSARWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCLTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAAGTCACTGTGGGACACTaGCAGCAGCATTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGEVTVGH*QQHFDK
Trigger: TTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGAC...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGGTCACTGTGGGACACTaGCAGCAGCATTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLEVTVGH*QQHFDK
Trigger: TTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGAC...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAAGTAGTGAGTCCCTCTaGGATAGATGTGAGAACATA +
Preference number: 4 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTSSESL*DRCENI
Trigger: TATGTTCTCACATCTATCTCAGAGGGACTCACTACT...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CTGGAGGAGACAACTGTATCAAGAGTAGTGAGTCCCTCTGAGATAGATGTGAGAAGTAGTGAGTCCCTCTaGGATAGATGTGAGAACATA +
Preference number: 4 (lower is better)
Translates to: LEETTVSRVVSPSEIDVRSSESL*DRCENI
Trigger: TATGTTCTCACATCTATCTCAGAGGGACTCACTACT...TCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCAGTAGTGAGTCCCTCTaGGATAGATGTGAGAACATA +
Preference number: 4 (lower is better)
Translates to: AQTVKVFFMFWVWGESESSSESL*DRCENI
Trigger: TATGTTCTCACATCTATCTCAGAGGGACTCACTACT...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATCTTCCATTAGGTTTCTaGAGCACTGGGCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: PRTVLGSPKKAELLQILYLPLGF*STGQGP
Trigger: AGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAG...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGCTGCCACATCTCTTCTaGATACAGACAGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWLPHLF*IQTDFG
Trigger: CCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAG...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGAGACAATGGTGTTCATaGGGACAGACATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWRQWCS*GQTSSA
Trigger: AGCAGATGATGTCTGTCCTCATGAACACCATTGTCT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCTTGGAATCTGCACCGTaGAAAGATCATCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFLESAP*KDHLQI
Trigger: AATCTGCAGATGATCTTTGCACGGTGCAGATTCCAA...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCCCATCCATAGCATCATaGTCATCTGTACTGGTATAT +
Preference number: 4 (lower is better)
Translates to: VEGCSTPEVAETMIVTDAPSIAS*SSVLVY
Trigger: ATATACCAGTACAGATGAGCATGATGCTATGGATGG...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCCAAGAACCACAGAATTaGAAGCTCTATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVQEPQN*KLYFLI
Trigger: AATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTG...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGACATCTGGGTTTTGCTaGATAAAATGTAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLTSGFC*IKCNSL
Trigger: GAGACTATTACATTTTATGCAGCAAAACCCAGATGT...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAACATCTGGGTTTTGCTaGATAAAATGTAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCRTSGFC*IKCNSL
Trigger: GAGACTATTACATTTTATGCAGCAAAACCCAGATGT...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGTGCATGGTTCAGTGTTaGCATCACTGCGCAACGCCT +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKCMVQC*HHCATP
Trigger: AGGCGTTGCGCAGTGATGGCAACACTGAACCATGCA...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATACAGACATCATCTGCTaGAGGACATCTGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: HLELFWVALRRQSCFKYYTDIIC*RTSGFC
Trigger: GCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGT...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATACAGGTGAAATGACTTaGCAAGGTTCACAACACAGT +
Preference number: 4 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNTGEMT*QGSQHS
Trigger: ACTGTGTTGTGAACCTTGGCAAGTCATTTCACCTGT...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGAATTCAGCCAAACTCTaGAAGTGCAGCGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLENSAKL*KCSAIF
Trigger: GAAGATGGCGCTGCACTTCCAGAGTTTGGCTGAATT...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTCAAAATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCAATTCAGCCAAACTCTaGAAGTGCAGCGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VKMVVPIQLEDAKADIISNSAKL*KCSAIF
Trigger: GAAGATGGCGCTGCACTTCCAGAGTTTGGCTGAATT...GGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGTGTTCCACAGTACCCTaGAGAAACTTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWCSTVP*RNFFTS
Trigger: TGATGTGAAGAAGTTTCTCCAGGGTACTGTGGAACA...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTATGTTCTCCAAGTTGTTaGAATCTGCACCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PRRSLASPINIRFTSSCLCSPSC*NLHRAK
Trigger: CTTTGCACGGTGCAGATTCCAACAACTTGGAGAACA...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCTGTTCTCCAAGTTGTTaGAATCTGCACCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCCSPSC*NLHRAK
Trigger: CTTTGCACGGTGCAGATTCCAACAACTTGGAGAACA...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGAAGATCCAATGTTTCTaGTTCCAGGAAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLKIQCF*FQENCS
Trigger: AGAACAATTTTCCTGGAACCAGAAACATTGGATCTT...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGTCAAAATTCAAACGCTaGGATCTGTTTTGCATAAGT +
Preference number: 4 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWSKFKR*DLFCIS
Trigger: ACTTATGCAAAACAGATCCCAGCGTTTGAATTTTGA...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTGGAACTCTGGGTACATCACTCCTCAGGCGTACAACTGGGCATAGGAGATTTTAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 4 (lower is better)
Translates to: LELWVHHSSGVQLGIGDFSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...AAAATCTCCTATGCCCAGTTGTACGCCTGAGGAGTGATGTACCCAGAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519256.5
CDS-3UTR CCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAAACTGGTACAGCAGCTaGAGGAGACAACTGTATCAA +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQINWYSS*RRQLYQ
Trigger: TTGATACAGTTGTCTCCTCCAGCTGCTGTACCAGTT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATACTCTCTGCATCGAAGTaGCTTCTTGCCCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWILSASK*LLALFC
Trigger: GCAAAAGAGGGCAAGAAGCCACTTCGATGCAGAGAG...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTCTGCTGCAGGACATCTaGGTTTTGCTGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFLLQDI*VLLHKM
Trigger: CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAG...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTAGAGCTTTAGGAACATaGCCTCAGGCTGGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: VLEITGSYLPQYLRFVTIRALGT*PQAGRV
Trigger: CACGCGCCCAGCCTGAGGCCATGTTCCTAAAGCTCT...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR CCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGAGGTTTCTGAAGCACTaGGCAAGGACCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKRFLKH*ARTSCL
Trigger: CAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCT...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGTTTCTGAAGCACTaGGCAAGGACCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSRFLKH*ARTSCL
Trigger: CAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCT...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAAAATACAGACAGATTTTaGGTGAACCTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TAQRLCHISSEYRQILGENTDRF*VNLSLF
Trigger: GAACAGAGACAGGTTCACCCAAAATCTGTCTGTATT...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTCATGTTCTGGGTTTaGGGTGAGTCAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIFMFWV*GESESQ
Trigger: TTGGGATTCTGACTCACCCCAAACCCAGAACATGAA...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCCTCTGTGCACAGAGCTaGTATTGTCACAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: IRSFSRKKKPELDRFATSLCAQS*YCHSVI
Trigger: TATTACACTGTGACAATACCAGCTCTGTGCACAGAG...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CCA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCTGTAACCCTTCTCTaGGTACATAAATCTGATGAA +
Preference number: 4 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPSVTLL*VHKSDE
Trigger: TTCATCAGATTTATGTACCCAGAGAAGGGTTACAGA...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATTCTGACCTTGACTCTTaGTTGAAACTGTTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDSDLDS*LKLLKR
Trigger: TCTCTTCAACAGTTTCAACCAAGAGTCAAGGTCAGA...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTAAAGTTGACACTTGCTaGGACATTCTGGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFKVDTC*DILDCQ
Trigger: TTGACAGTCCAGAATGTCTCAGCAAGTGTCAACTTT...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAAACAAATTGGTCTTTCTaGACCTCAAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGETNWSF*TSNHPN
Trigger: GTTGGGGTGGTTTGAGGTTCAGAAAGACCAATTTGT...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCACAAATTGGTCTTTCTaGACCTCAAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVTNWSF*TSNHPN
Trigger: GTTGGGGTGGTTTGAGGTTCAGAAAGACCAATTTGT...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGGCACTAAAACGTCTTTaGGAGAAGTATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLALKRL*EKYHEM
Trigger: CATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGC...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATGCAGATTCATCTGCTaGACTGCCAATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQICRFIC*TANEVK
Trigger: TTTGACTTCATTGGCAGTTCAGCAGATGAATCTGCA...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGCATATTCACATCTGCTaGCCGTGCACAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQHIHIC*PCTTAP
Trigger: TGGAGCAGTTGTGCACGGTCAGCAGATGTGAATATG...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGGCAAGACGTCCTTCCTaGATGGTGATGTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMARRPS*MVMSTV
Trigger: AACTGTGGACATCACCATTCAGGAAGGACGTCTTGC...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCGATGTCTGTCTTCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFDVCLL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGAAGACAGACATC...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GCACAAACTGTAAAGGTCTTCTTCATGTTCTGGGTTTGGGGTGAGTCAGAATCCGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 4 (lower is better)
Translates to: AQTVKVFFMFWVWGESESELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...GGATTCTGACTCACCCCAAACCCAGAACATGAAGAAGACCTTTACAGTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AACCCTTGGCAAAGGTCAATTCAAATTTTACACCAAATGACAAACCTTGACTTACCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: NPWQRSIQILHQMTNLDLPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...TAAGTCAAGGTTTGTCATTTGGTGTAAAATTTGAATTGACCTTTGCCAAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTCCATCAGAAGGCGAGTaGGCGCTGTGTAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: VLEITGSYLPQYLRFVTIPSEGE*ALCRRL
Trigger: CAACCTTCTACACAGCGCTCACTCGCCTTCTGATGG...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATACGTTCAACAGCATTCTaGAGAAGGGGAAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWIRSTAF*RRGRYV
Trigger: AACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACG...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCACACAAGGCAGACTTaGGAGCTGAATAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: ITNYSFNRFQWHSSQSRIHTRQT*ELNSRW
Trigger: CCATCTGCTATTCAGCTCTCAAGTCTGCCTTGTGTG...GATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGCTGACAGCAGCATTTTaGCAAAAGCCTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLELTAAF*QKPGVH
Trigger: ATGTACTCCAGGCTTTTGTCAAAATGCTGCTGTCAG...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGAAATGTAATAGTCTCTaGCCAGCCTGGGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKKCNSL*PAWVAS
Trigger: AGAGGCTACCCAGGCTGGTCAGAGACTATTACATTT...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATAGACAATGGTGTTCATaGGGACAGACATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: HLELFWVALRRQSCFKYYRQWCS*GQTSSA
Trigger: AGCAGATGATGTCTGTCCTCATGAACACCATTGTCT...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCATCCTCTGAAAATCTaGATTTTAGCACCTAGAACT +
Preference number: 4 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDHPLKI*ILAPRT
Trigger: AGTTCTAGGTGCTAAAATTCAGATTTTCAGAGGATG...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCTTTTCCCAAGGAAGCTaGTTTGCTACTGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFFSQGS*FATETQ
Trigger: TTGAGTTTCAGTAGCAAATCAGCTTCCTTGGGAAAA...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTTTATTACTCCTATTATaGAGTGTTCCACAGTACCCT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSALLLLL*SVPQYP
Trigger: AGGGTACTGTGGAACACTGCATAATAGGAGTAATAA...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACACAAGAACCACAGAATTaGAAGCTCTATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTQEPQN*KLYFLI
Trigger: AATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTG...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGATCGAAGTGGCTTCTTaGCCTCTTTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTIEVAS*PLLLCA
Trigger: AGCACATAGCAAAAGAGGGCAAGAAGCCACTTCGAT...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATACAGACATCATCTGCTaGAGGACATCTGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHTDIIC*RTSGFC
Trigger: GCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGT...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCCAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCCAGGCTCGTTCTAAATaGTCACAGCCCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: WVALRRQSCFKYYILIVTQARSK*SQPKVP
Trigger: AGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTG...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAAAGATCCAATGTTTCTaGTTCCAGGAAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTKIQCF*FQENCS
Trigger: AGAACAATTTTCCTGGAACCAGAAACATTGGATCTT...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTCATGATAATTACCTaGATCAGACAAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVFMIIT*IRQTLR
Trigger: CCTCAGGGTTTGTCTGATCCAGGTAATTATCATGAA...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGATCTCTCACAACTATaGCAACAGAGTCCAACCGAG +
Preference number: 4 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHDLSQL*QQSPTE
Trigger: CTCGGTTGGACTCTGTTGCCATAGTTGTGAGAGATC...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWIRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAATACGAGCATATACCTaGACCTTAGACTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRIRAYT*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGTATATGCTCGTAT...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCACAGCATGGTGTAGCTaGTCTTTGTGTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTTAWCS*SLCSVQ
Trigger: TTGCACTGAACACAAAGACCAGCTACACCATGCTGT...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGATCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGGGAGTTGTACATGTTaGCTCTCCATACCACCGTTC +
Preference number: 4 (lower is better)
Translates to: KGQDLITISANHFTSFSEGSCTC*LSIPPF
Trigger: GAACGGTGGTATGGAGAGCCAACATGTACAACTCCC...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATTGTAGCAAGTCACTGTaGGACACTGACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHCSKSL*DTDSSI
Trigger: AATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACA...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCAACTGGTACAGCAGCTaGAGGAGACAACTGTATCAA +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVNWYSS*RRQLYQ
Trigger: TTGATACAGTTGTCTCCTCCAGCTGCTGTACCAGTT...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGCTCTCTGCATCGAAGTaGCTTCTTGCCCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQLSASK*LLALFC
Trigger: GCAAAAGAGGGCAAGAAGCCACTTCGATGCAGAGAG...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCTGCTTGGGGAGGGGCTaGCTGTTTATCAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSCLGRG*LFIKLA
Trigger: AGCAAGTTTGATAAACAGCCAGCCCCTCCCCAAGCA...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATACATGTCGAGACTGCATaGTTCAGTGTTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWIHVETA*FSVAIT
Trigger: AGTGATGGCAACACTGAACCATGCAGTCTCGACATG...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCATTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGACATCTATGGTCAAATaGAGGAGACAAAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLTSMVK*RRQRFL
Trigger: TAGAAACCTTTGTCTCCTCCATTTGACCATAGATGT...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATTTTCCTGTGTTTTGCTaGAGGTCTAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNFPVFC*RSRIIN
Trigger: GTTGATTATTCTAGACCTTCAGCAAAACACAGGAAA...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAATCTGATCTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAGAAGTATCACGAAATaGGGTAGCTATTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KSDLLRGSQGTGSDYHKCRSITK*GSYFPV
Trigger: CACAGGAAAATAGCTACCTCATTTCGTGATACTTCT...GCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGCATGAAAGTGCTAACTaGGATAGTAGTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLEHESAN*DSSGGS
Trigger: ACTTCCACCACTACTATCTCAGTTAGCACTTTCATG...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAACATGAAAGTGCTAACTaGGATAGTAGTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGEHESAN*DSSGGS
Trigger: ACTTCCACCACTACTATCTCAGTTAGCACTTTCATG...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCC...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCAGATGTCTGTCTTCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPDVCLL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGAAGACAGACATC...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PRTVLGSPKKAELLQILYINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGGTCACTGTGGGACACTaGCAGCAGCATTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKVTVGH*QQHFDK
Trigger: TTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGAC...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCAAGCTCATATGGTCCTaGGTGAGACATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ITNYSFNRFQWHSSQSRIKLIWS*VRHSRS
Trigger: ACTCCTGGAATGTCTCACTCAGGACCATATGAGCTT...GATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAGTAGTGAGTCCCTCTaGGATAGATGTGAGAACATA +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRSSESL*DRCENI
Trigger: TATGTTCTCACATCTATCTCAGAGGGACTCACTACT...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAAAATGTAATAGTCTCTaGCCAGCCTGGGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KGQDLITISANHFTSFSEKCNSL*PAWVAS
Trigger: AGAGGCTACCCAGGCTGGTCAGAGACTATTACATTT...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGAAATGTAATAGTCTCTaGCCAGCCTGGGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQKCNSL*PAWVAS
Trigger: AGAGGCTACCCAGGCTGGTCAGAGACTATTACATTT...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCAAATGTAATAGTCTCTaGCCAGCCTGGGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: WVALRRQSCFKYYILIVTKCNSL*PAWVAS
Trigger: AGAGGCTACCCAGGCTGGTCAGAGACTATTACATTT...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGCTGACTGGGGCTACATaGCTCCTCCTGAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQLTGAT*LLLKKY
Trigger: ATATTTCTTCAGGAGGAGTCATGTAGCCCCAGTCAG...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCCATCCTCTGAAAATCTaGATTTTAGCACCTAGAACT +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFHPLKI*ILAPRT
Trigger: AGTTCTAGGTGCTAAAATTCAGATTTTCAGAGGATG...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCCCTCTCTCCTGTGTTTaGTCCTCTGATTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSPLSCV*SSDSQI
Trigger: GATCTGAGAATCAGAGGATCAAACACAGGAGAGAGG...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR TCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAACGAGCATATACCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQITSIYL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGGTATATGCTCGT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523189.6
CDS-3UTR GCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGCTGATGTCCATCCTCTaGTCAACAGGTAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQLMSIL*STGKGL
Trigger: CAGTCCTTTACCTGTTGAGCAGAGGATGGACATCAG...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAATTATTACTCCTATTATaGAGTGTTCCACAGTACCCT +
Preference number: 4 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKLLLLL*SVPQYP
Trigger: AGGGTACTGTGGAACACTGCATAATAGGAGTAATAA...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACATTATTACTCCTATTATaGAGTGTTCCACAGTACCCT +
Preference number: 4 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTLLLLL*SVPQYP
Trigger: AGGGTACTGTGGAACACTGCATAATAGGAGTAATAA...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp AAACATACTGAAGCTGTGGATAAATTCAGAGCTTTAGGAACATGGCCTCAGGCTTTGGAATCTGCACCGTaGAAAGATCATCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: KHTEAVDKFRALGTWPQALESAP*KDHLQI
Trigger: AATCTGCAGATGATCTTTGCACGGTGCAGATTCCAA...AGCCTGAGGCCATGTTCCTAAAGCTCTGAATTTATCCACAGCTTCAGTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR GCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTTTGGTCGAATAACTaGACAAGAAGAGCACATGTC +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIFWSNN*TRRAHV
Trigger: GACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTCAAGAACCACAGAATTaGAAGCTCTATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAQEPQN*KLYFLI
Trigger: AATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTG...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAGGACATCTGGGTTTTaGTGCATAAAATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: VEGCSTPEVAETMIVTDARTSGF*CIKCNS
Trigger: ACTATTACATTTTATGCAGCAAAACCCAGATGTCCT...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGTCATCATGTCGAGACTaGATGGTTCAGTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKSSCRD*MVQCCH
Trigger: ATGGCAACACTGAACCATGCAGTCTCGACATGATGA...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCATCATGTCGAGACTaGATGGTTCAGTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PRTVLGSPKKAELLQILYSSCRD*MVQCCH
Trigger: ATGGCAACACTGAACCATGCAGTCTCGACATGATGA...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCAGGACAGACATCATCTaGTGCAGGACATCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: WVALRRQSCFKYYILIVTRTDII*CRTSGF
Trigger: AAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCT...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGTCTCTTGATAAAGGCTaGTCCGCACATGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: NAASSRHITNYSFNRFQWSLDKG*SAHGQK
Trigger: TTTCTGACCATGTGCGGAGCAGCCTTTATCAAGAGA...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACTTGCTGAGACATTCTaGACTGTCAATAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPLAETF*TVNKFQ
Trigger: TTGGAACTTATTGACAGTCCAGAATGTCTCAGCAAG...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGCTTGCTGAGACATTCTaGACTGTCAATAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWLAETF*TVNKFQ
Trigger: TTGGAACTTATTGACAGTCCAGAATGTCTCAGCAAG...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAATGTTCCACAGTACCCTaGAGAAACTTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: MVVPIQLEDAKADIISTQCSTVP*RNFFTS
Trigger: TGATGTGAAGAAGTTTCTCCAGGGTACTGTGGAACA...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAAAGATCCAATGTTTCTaGTTCCAGGAAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSKIQCF*FQENCS
Trigger: AGAACAATTTTCCTGGAACCAGAAACATTGGATCTT...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTAAGATCCAATGTTTCTaGTTCCAGGAAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAKIQCF*FQENCS
Trigger: AGAACAATTTTCCTGGAACCAGAAACATTGGATCTT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGGATCTCTCACAACTATaGCAACAGAGTCCAACCGAG +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKDLSQL*QQSPTE
Trigger: CTCGGTTGGACTCTGTTGCCATAGTTGTGAGAGATC...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGATACGAGCATATACCTaGACCTTAGACTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKIRAYT*TLDCDP
Trigger: GGGATCACAGTCTAAGGTCCAGGTATATGCTCGTAT...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGTCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKSSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTGGAGGAGACAACTGTATCAAGAGTAGTGAGTCCCTCTGAGATAGATGTGAGAAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 4 (lower is better)
Translates to: LEETTVSRVVSPSEIDVRSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...TCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 4 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGTGTAGCAAGTCACTGTaGGACACTGACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKCSKSL*DTDSSI
Trigger: AATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACA...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATATTCATGTTCTGGGTTTaGGGTGAGTCAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWIFMFWV*GESESQ
Trigger: TTGGGATTCTGACTCACCCCAAACCCAGAACATGAA...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGTTCATGTTCTGGGTTTaGGGTGAGTCAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: NAASSRHITNYSFNRFQWFMFWV*GESESQ
Trigger: TTGGGATTCTGACTCACCCCAAACCCAGAACATGAA...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGGTCTTCTTCATGTTCTaGGTTTGGGGTGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: NAASSRHITNYSFNRFQWVFFMF*VWGESE
Trigger: TTCTGACTCACCCCAAACCCAGAACATGAAGAAGAC...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAGATGTTAGCCAGATTATCCCTTCAACTCCAACATAAACAATCATTTGGGGGAATAAAAGAGTCAAGCTaGGTGCAGTGGAGCACACCT +
Preference number: 4 (lower is better)
Translates to: KMLARLSLQLQHKQSFGGIKESS*VQWSTP
Trigger: AGGTGTGCTCCACTGCACCCAGCTTGACTCTTTTAT...TCCCCCAAATGATTGTTTATGTTGGAGTTGAAGGGATAATCTGGCTAACATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp TATAAATATTTGCTCTTCATCCCTCGCCCAAAGGAAAACTATAAATCTTGTCTCAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: YKYLLFIPRPKENYKSCLSQLGL*CHVIQN
Trigger: ATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCT...GAGACAAGATTTATAGTTTTCCTTTGGGCGAGGGATGAAGAGCAAATATTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGACAAATTGGTCTTTCTaGACCTCAAACCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKTNWSF*TSNHPN
Trigger: GTTGGGGTGGTTTGAGGTTCAGAAAGACCAATTTGT...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTTTCCTGTGTTTTGCTaGAGGTCTAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFFPVFC*RSRIIN
Trigger: GTTGATTATTCTAGACCTTCAGCAAAACACAGGAAA...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCAGAAGTATCACGAAATaGGGTAGCTATTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVRSITK*GSYFPV
Trigger: CACAGGAAAATAGCTACCTCATTTCGTGATACTTCT...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGTGCAGATTCATCTGCTaGACTGCCAATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: NAASSRHITNYSFNRFQWCRFIC*TANEVK
Trigger: TTTGACTTCATTGGCAGTTCAGCAGATGAATCTGCA...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGCATGAAAGTGCTAACTaGGATAGTAGTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKHESAN*DSSGGS
Trigger: ACTTCCACCACTACTATCTCAGTTAGCACTTTCATG...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAGATGTCTGTCTTCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRDVCLL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGAAGACAGACATC...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCAAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 4 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 4 (lower is better)
Translates to: PRRSLASPINIRFTSSCLRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRTVLGSPKKAELLQILYDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGATAAATCTGATCTTTTaGGAGGCTCCCAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQINLIF*EAPKGQ
Trigger: CTGTCCCTTGGGAGCCTCTCAAAAGATCAGATTTAT...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGAAACAATGTCCTCTATaGTCCTTACCAAGAGTAGTG +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLEKQCPL*SLPRVV
Trigger: CACTACTCTTGGTAAGGATCATAGAGGACATTGTTT...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519256.5
CDS-3UTR TCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGTTGTCAATACAATTATaGAAAGCCCTTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWLSIQL*KALGLF
Trigger: GAAAAGGCCAAGGGCTTTTCATAATTGTATTGACAA...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTTATTACTCCTATTATaGAGTGTTCCACAGTACCCT +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSLLLLL*SVPQYP
Trigger: AGGGTACTGTGGAACACTGCATAATAGGAGTAATAA...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCCAAGAACCACAGAATTaGAAGCTCTATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PEVAETMIVTDAKKREVFQEPQN*KLYFLI
Trigger: AATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTG...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CTGGAGGAGACAACTGTATCAAGAGTAGTGAGTCCCTCTGAGATAGATGTGAGACAAGAACCACAGAATTaGAAGCTCTATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: LEETTVSRVVSPSEIDVRQEPQN*KLYFLI
Trigger: AATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTG...TCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGAGGACATCTGGGTTTTaGTGCATAAAATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLRTSGF*CIKCNS
Trigger: ACTATTACATTTTATGCAGCAAAACCCAGATGTCCT...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTAATTCAGCCAAACTCTaGAAGTGCAGCGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVNSAKL*KCSAIF
Trigger: GAAGATGGCGCTGCACTTCCAGAGTTTGGCTGAATT...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCCTTGCTGAGACATTCTaGACTGTCAATAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVLAETF*TVNKFQ
Trigger: TTGGAACTTATTGACAGTCCAGAATGTCTCAGCAAG...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGTGTTCCACAGTACCCTaGAGAAACTTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKCSTVP*RNFFTS
Trigger: TGATGTGAAGAAGTTTCTCCAGGGTACTGTGGAACA...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCTGTTCTCCAAGTTGTTaGAATCTGCACCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSCSPSC*NLHRAK
Trigger: CTTTGCACGGTGCAGATTCCAACAACTTGGAGAACA...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTGATCTCTCACAACTATaGCAACAGAGTCCAACCGAG +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVDLSQL*QQSPTE
Trigger: CTCGGTTGGACTCTGTTGCCATAGTTGTGAGAGATC...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTAGAAGAAACCCGAGTTaGATAGGTTTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVRRNPS*IGLPQA
Trigger: GGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCT...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRNVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAAAACGTCTCTAGAACGTaGTTGTCATCTGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGENVSRT*LSSVIP
Trigger: AGGAATAACAGATGACAACCACGTTCTAGAGACGTT...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAATCCAGTCAAACAGCATaGTGTAGCTGGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KGQDLITISANHFTSFSESSQTA*CSWSLC
Trigger: ACACAAAGACCAGCTACACCATGCTGTTTGACTGGA...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAAAAAATACATTCCCCTaGGCTAGCCAACATCACTGT +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKKNTFP*ASQHHC
Trigger: ACAGTGATGTTGGCTAGCCCAGGGGAATGTATTTTT...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGTTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: NAASSRHITNYSFNRFQWFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTCACCTAGAACTGTTTTaGGTAGCCCTAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVHLELF*VALRRQ
Trigger: CTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCGTCTTCTTCATGTTCTaGGTTTGGGGTGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ITNYSFNRFQWHSSQSRIVFFMF*VWGESE
Trigger: TTCTGACTCACCCCAAACCCAGAACATGAAGAAGAC...GATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATTTTCCTGTGTTTTGCTaGAGGTCTAGAATAATCAAC +
Preference number: 4 (lower is better)
Translates to: HLELFWVALRRQSCFKYYFPVFC*RSRIIN
Trigger: GTTGATTATTCTAGACCTTCAGCAAAACACAGGAAA...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCACTAAAACGTCTTTaGGAGAAGTATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKALKRL*EKYHEM
Trigger: CATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCTGCAGATTCATCTGCTaGACTGCCAATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSCRFIC*TANEVK
Trigger: TTTGACTTCATTGGCAGTTCAGCAGATGAATCTGCA...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AAGATGTTAGCCAGATTATCCCTTCAACTCCAACATAAACAATCATTTGGGGGACATGAAAGTGCTAACTaGGATAGTAGTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KMLARLSLQLQHKQSFGGHESAN*DSSGGS
Trigger: ACTTCCACCACTACTATCTCAGTTAGCACTTTCATG...TCCCCCAAATGATTGTTTATGTTGGAGTTGAAGGGATAATCTGGCTAACATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAACATGAAAGTGCTAACTaGGATAGTAGTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KGQDLITISANHFTSFSEHESAN*DSSGGS
Trigger: ACTTCCACCACTACTATCTCAGTTAGCACTTTCATG...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCC...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGATGTCTGTCTTCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWIDVCLL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGAAGACAGACATC...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 4 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCAGGTCATTTAGGAACTaGAGAGTCCTTGAAATTACA +
Preference number: 4 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVRSFRN*RVLEIT
Trigger: TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCT...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGGACTATGATTGTCACTaGTGCCAAGAAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKDYDCH*CQEKGS
Trigger: ACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTC...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGTTGGAATCTGCACCGTaGAAAGATCATCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQLESAP*KDHLQI
Trigger: AATCTGCAGATGATCTTTGCACGGTGCAGATTCCAA...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAACCATCCATAGCATCATaGTCATCTGTACTGGTATAT +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKPSIAS*SSVLVY
Trigger: ATATACCAGTACAGATGAGCATGATGCTATGGATGG...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTCAAGAACCACAGAATTaGAAGCTCTATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSQEPQN*KLYFLI
Trigger: AATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTG...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TATAAATATTTGCTCTTCATCCCTCGCCCAAAGGAAAACTATAAATCTTGTCTCGGTCTTTGTGTTCAGTaGAAAGGCAATCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: YKYLLFIPRPKENYKSCLGLCVQ*KGNPSK
Trigger: CTTCGAGGGATTGCCTTTGCACTGAACACAAAGACC...GAGACAAGATTTATAGTTTTCCTTTGGGCGAGGGATGAAGAGCAAATATTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAACATCTGGGTTTTGCTaGATAAAATGTAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQITSGFC*IKCNSL
Trigger: GAGACTATTACATTTTATGCAGCAAAACCCAGATGT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGAGGACATCTGGGTTTTaGTGCATAAAATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWRTSGF*CIKCNS
Trigger: ACTATTACATTTTATGCAGCAAAACCCAGATGTCCT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAAGGACATCTGGGTTTTaGTGCATAAAATGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIRTSGF*CIKCNS
Trigger: ACTATTACATTTTATGCAGCAAAACCCAGATGTCCT...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCATCCATGGTGAAGGCTaGATCTCCAACAAATTGACA +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSIHGEG*ISNKLT
Trigger: TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGAT...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGTGTTCCACAGTACCCTaGAGAAACTTCTTCACATCA +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQCSTVP*RNFFTS
Trigger: TGATGTGAAGAAGTTTCTCCAGGGTACTGTGGAACA...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGAAGATCCAATGTTTCTaGTTCCAGGAAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWKIQCF*FQENCS
Trigger: AGAACAATTTTCCTGGAACCAGAAACATTGGATCTT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAATTCATGATAATTACCTaGATCAGACAAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKFMIIT*IRQTLR
Trigger: CCTCAGGGTTTGTCTGATCCAGGTAATTATCATGAA...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTAAGGGGAAGGTACGTTaGGTACATCCAGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: FWVALRRQSCFKYYILIVKGKVR*VHPVKQ
Trigger: CTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGTCAAAATTCAAACGCTaGGATCTGTTTTGCATAAGT +
Preference number: 4 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWSKFKR*DLFCIS
Trigger: ACTTATGCAAAACAGATCCCAGCGTTTGAATTTTGA...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTCATGTCGAGACTGCATaGTTCAGTGTTGCCATCACT +
Preference number: 4 (lower is better)
Translates to: FWVALRRQSCFKYYILIVHVETA*FSVAIT
Trigger: AGTGATGGCAACACTGAACCATGCAGTCTCGACATG...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGTTTAACAGGTTCCAATaGCATTCGTCTCAATCCAGG +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQFNRFQ*HSSQSR
Trigger: CCTGGATTGAGACGAATGCCATTGGAACCTGTTAAA...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp AAGATGTTAGCCAGATTATCCCTTCAACTCCAACATAAACAATCATTTGGGGGACCTAGAGTTGTAGACTaGTTTCAAGATCACCATCGA +
Preference number: 4 (lower is better)
Translates to: KMLARLSLQLQHKQSFGGPRVVD*FQDHHR
Trigger: TCGATGGTGATCTTGAAACCAGTCTACAACTCTAGG...TCCCCCAAATGATTGTTTATGTTGGAGTTGAAGGGATAATCTGGCTAACATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGCACTAAAACGTCTTTaGGAGAAGTATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: KGQDLITISANHFTSFSEALKRL*EKYHEM
Trigger: CATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGC...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTTGCAGATTCATCTGCTaGACTGCCAATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVCRFIC*TANEVK
Trigger: TTTGACTTCATTGGCAGTTCAGCAGATGAATCTGCA...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTGGATCAGACAAACCCTaGGGGTTTTCAAGTATCCTT +
Preference number: 4 (lower is better)
Translates to: FWVALRRQSCFKYYILIVGSDKP*GFSSIL
Trigger: AAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCC...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 4 (lower is better)
Translates to: KGQDLITISANHFTSFSEELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTAAGTCGCTGAGACTATaGTTGTCACTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VLEITGSYLPQYLRFVTIKSLRL*LSLMPR
Trigger: TCTTGGCATCAGTGACAATCATAGTCTCAGCGACTT...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGATGGAGATGCCCTTaGGTTTCATTGGATAAATCT +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSRWRCP*VSLDKS
Trigger: AGATTTATCCAATGAAACTCAAGGGCATCTCCATCT...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATCCTCTGAAAATCTaGATTTTAGCACCTAGAACT +
Preference number: 4 (lower is better)
Translates to: NAASSRHITNYSFNRFQWHPLKI*ILAPRT
Trigger: AGTTCTAGGTGCTAAAATTCAGATTTTCAGAGGATG...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTTCCAGCAACTTCCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVSSNFL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGGAAGTTGCTGGA...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR GCA 90 bp AAGATGTTAGCCAGATTATCCCTTCAACTCCAACATAAACAATCATTTGGGGGATTTTGGTCGAATAACTaGACAAGAAGAGCACATGTC +
Preference number: 4 (lower is better)
Translates to: KMLARLSLQLQHKQSFGGFWSNN*TRRAHV
Trigger: GACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA...TCCCCCAAATGATTGTTTATGTTGGAGTTGAAGGGATAATCTGGCTAACATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGTTTTGGTCGAATAACTaGACAAGAAGAGCACATGTC +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKFWSNN*TRRAHV
Trigger: GACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAACCATCCATAGCATCATaGTCATCTGTACTGGTATAT +
Preference number: 4 (lower is better)
Translates to: KGQDLITISANHFTSFSEPSIAS*SSVLVY
Trigger: ATATACCAGTACAGATGAGCATGATGCTATGGATGG...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR GCA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGACATCTGGGTTTTGCTaGATAAAATGTAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: IQLEDAKADIISTQGRLETSGFC*IKCNSL
Trigger: GAGACTATTACATTTTATGCAGCAAAACCCAGATGT...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGTTCATGATAATTACCTaGATCAGACAAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMFMIIT*IRQTLR
Trigger: CCTCAGGGTTTGTCTGATCCAGGTAATTATCATGAA...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATAGTACATTGTCAAAATaGTTGTCCCCATACAACTTG +
Preference number: 4 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHSTLSK*LSPYNL
Trigger: CAAGTTGTATGGGGACAACCATTTTGACAATGTACT...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGAATACAGACAGATTTTaGGTGAACCTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKNTDRF*VNLSLF
Trigger: GAACAGAGACAGGTTCACCCAAAATCTGTCTGTATT...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGTCTGTACTAACCCTTaGCAAAGGTCAATTCAAATT +
Preference number: 4 (lower is better)
Translates to: SDDDESDRSQGRRNPSWIVCTNP*QRSIQI
Trigger: AATTTGAATTGACCTTTGCCAAGGGTTAGTACAGAC...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTAAAGTTGACACTTGCTaGGACATTCTGGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: VLEITGSYLPQYLRFVTIKVDTC*DILDCQ
Trigger: TTGACAGTCCAGAATGTCTCAGCAAGTGTCAACTTT...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTTGCAGATTCATCTGCTaGACTGCCAATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: VLEITGSYLPQYLRFVTICRFIC*TANEVK
Trigger: TTTGACTTCATTGGCAGTTCAGCAGATGAATCTGCA...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTGATGTCTGTCTTCTTTaGGGTTCTTTGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVDVCLL*GSLKLI
Trigger: GATCAACTTCAAAGAACCTCAAAGAAGACAGACATC...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGCATCCTCTGAAAATCTaGATTTTAGCACCTAGAACT +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQHPLKI*ILAPRT
Trigger: AGTTCTAGGTGCTAAAATTCAGATTTTCAGAGGATG...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR TCA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTCTGTGGCATAGTAGTTaGCAGTTACCTTTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVLWHSS*QLPLRS
Trigger: ACTTCTTAAAGGTAACTGTCAACTACTATGCCACAG...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCTTATTACTCCTATTATaGAGTGTTCCACAGTACCCT +
Preference number: 4 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSLLLLL*SVPQYP
Trigger: AGGGTACTGTGGAACACTGCATAATAGGAGTAATAA...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR GCA 90 bp AACCCTTGGCAAAGGTCAATTCAAATTTTACACCAAATGACAAACCTTGACTTATTGGAATCTGCACCGTaGAAAGATCATCTGCAGATT +
Preference number: 4 (lower is better)
Translates to: NPWQRSIQILHQMTNLDLLESAP*KDHLQI
Trigger: AATCTGCAGATGATCTTTGCACGGTGCAGATTCCAA...TAAGTCAAGGTTTGTCATTTGGTGTAAAATTTGAATTGACCTTTGCCAAGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR GCA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATCAAGAACCACAGAATTaGAAGCTCTATTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHQEPQN*KLYFLI
Trigger: AATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTG...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGATCTTCTCTAAATTTTaGGCAGTATCAATTACGGCA +
Preference number: 4 (lower is better)
Translates to: QHEILKFILIFTQIYHQKIFSKF*AVSITA
Trigger: TGCCGTAATTGATACTGCCCAAAATTTAGAGAAGAT...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
3UTR CAA 72 bp GTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAGACTTCTGACATACGA +
Preference number: 4 (lower is better)
Translates to: VTIFVMNVSRTW*SSVIPKTSDIR
Trigger: TCGTATGTCAGAAGTCTTAGGAATAACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR TCA 90 bp AACCCTTGGCAAAGGTCAATTCAAATTTTACACCAAATGACAAACCTTGACTTAGCACTAAAACGTCTTTaGGAGAAGTATCACGAAATG +
Preference number: 4 (lower is better)
Translates to: NPWQRSIQILHQMTNLDLALKRL*EKYHEM
Trigger: CATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGC...TAAGTCAAGGTTTGTCATTTGGTGTAAAATTTGAATTGACCTTTGCCAAGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp AACCCTTGGCAAAGGTCAATTCAAATTTTACACCAAATGACAAACCTTGACTTAGAACTGAAGAGTCCTTaGAATTACAGGCTCATATCT +
Preference number: 4 (lower is better)
Translates to: NPWQRSIQILHQMTNLDLELKSP*NYRLIS
Trigger: AGATATGAGCCTGTAATTTCAAGGACTCTTCAGTTC...TAAGTCAAGGTTTGTCATTTGGTGTAAAATTTGAATTGACCTTTGCCAAGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR TCA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTTCACAACACAGTAAATaGAGAGCTGGGATTTTAAGC +
Preference number: 4 (lower is better)
Translates to: VLEITGSYLPQYLRFVTISQHSK*RAGILS
Trigger: GCTTAAAATCCCAGCTCTTCATTTACTGTGTTGTGA...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CCA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGTCAAAATTCAAACGCTaGGATCTGTTTTGCATAAGT +
Preference number: 4 (lower is better)
Translates to: QDLITISANHFTSFSEEKSKFKR*DLFCIS
Trigger: ACTTATGCAAAACAGATCCCAGCGTTTGAATTTTGA...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CCA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGTCAAAATTCAAACGCTaGGATCTGTTTTGCATAAGT +
Preference number: 4 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQSKFKR*DLFCIS
Trigger: ACTTATGCAAAACAGATCCCAGCGTTTGAATTTTGA...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CCA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTAATACAGACAGATTTTaGGTGAACCTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FWVALRRQSCFKYYILIVNTDRF*VNLSLF
Trigger: GAACAGAGACAGGTTCACCCAAAATCTGTCTGTATT...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS GCA 90 bp AGCAGAGGCGGGCGCCGCGGAAGCCCCAGACGCCCGCGGGGTCCCTaGGCCGCTCGTCCTTCGCAGCCTCAGCCAGGCTTCGCGTCCGCA +
Preference number: 5 (lower is better)
Translates to: SRGGRRGSPRRPRGP*AARPSQPQPGFASA
Trigger: TGCGGACGCGAAGCCTGGCTGAGGCTGCGAAGGACGAGCGGCGCAGGGACCCCGCGGGCGTCTGGGGCTTCCGCGGCGCCCGCCTCTGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443155.5
CDS-3UTR CAA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTTTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSLSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTGCATGGTTCAGTGTaGCCATCACTGCGCAACGCC +
Preference number: 5 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLLHGSV*PSLRNA
Trigger: GGCGTTGCGCAGTGATGGCAACACTGAACCATGCAG...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGCCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTCTGGTTCCAGGAAAATaGTTCTCCAAGTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSLVPGK*FSKLLE
Trigger: TTCCAACAACTTGGAGAACAATTTTCCTGGAACCAG...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: LSIPPFNSILKKGKVRWVPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...TACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACACCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGTGGGAGTTGTACATGTaGGCTCTCCATACCACCGTT +
Preference number: 5 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPWELYM*ALHTTV
Trigger: AACGGTGGTATGGAGAGCCAACATGTACAACTCCCA...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGAACCTGTCTCTGTTCTaGACGGACAGGTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLNLSLF*TDRFCS
Trigger: GGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTT...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTCTGCATGGTTCAGTGTaGCCATCACTGCGCAACGCC +
Preference number: 5 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTLHGSV*PSLRNA
Trigger: GGCGTTGCGCAGTGATGGCAACACTGAACCATGCAG...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGACTGCATGGTTACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: SAHGQKSRVSSSCRDCMVTFRSL*IKAAPH
Trigger: GTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGT...AACCATGCAGTCTCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGGCACCTAGAACTGTTTaGGGTAGCCCTAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPAPRTV*GSPKKA
Trigger: TGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGC...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTACTCCCAGCTGATAATTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: EACVWSCGMLCSASRLVLLPADN*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAG...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTAACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: EACVWSCGMLCSASRLVLTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: ILIFTQIYHQKASERCVETFRSL*IKAAPH
Trigger: GTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTCTAGTTTTTGTGGAGAGTaGGAAACCAGCTATTTCTCA +
Preference number: 5 (lower is better)
Translates to: LSDAAEAGRPACGPVGCSSFCGE*ETSYFS
Trigger: TGAGAAATAGCTGGTTTCCAACTCTCCACAAAAACT...AGAGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGTTGTTCTCCAAGTTGTaGGAATCTGCACCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LVFVFSAKAIPRRSLASPLFSKL*ESAPCK
Trigger: TTTGCACGGTGCAGATTCCAACAACTTGGAGAACAA...CGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTATAGGTGGGGTTCAGTaGATTTCACAAAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: SLTSLGSLSASKWLLALFIGGVQ*ISQKEQ
Trigger: CTGTTCCTTTTGTGAAATCAACTGAACCCCACCTAT...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAAGGTGGGCAGATTGCTaGAGTTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSRWADC*SSGVRD
Trigger: GTCTCGAACTCCTGAACTCAAGCAATCTGCCCACCT...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR CAA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAACTGAAATACTTCTCATaGAGCAGGATGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: ILIFTQIYHQKASERCVELKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAG...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTAACCTGTCTCTGTTCTaGACGGACAGGTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTNLSLF*TDRFCS
Trigger: GGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTT...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATAACCTGTCTCTGTTCTaGACGGACAGGTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TAWCSWSLCSVQRQSLEDNLSLF*TDRFCS
Trigger: GGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTT...ATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTGTGGGATGCTAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: LYQMQLRQGGLRVVLWDAKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...AGCATCCCACAGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GAGGCCTGCGTGTGGTCCTGTGGGATGCTCTGTAGTGCTTCCAGGCTCGTTCTAAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: EACVWSCGMLCSASRLVLKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...TAGAACGAGCCTGGAAGCACTACAGAGCATCCCACAGGACCACACGCAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCTTGTTCTCCAAGTTGTaGGAATCTGCACCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVLFSKL*ESAPCK
Trigger: TTTGCACGGTGCAGATTCCAACAACTTGGAGAACAA...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCTCTGACCAGCCTGGGTAGCCTCTCTGCATCGAAGTGGCTTCTTGCCCTCTTTCTCCCAGCTGATAATTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SLTSLGSLSASKWLLALFLPADN*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAG...AAAGAGGGCAAGAAGCCACTTCGATGCAGAGAGGCTACCCAGGCTGGTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGATAGGTGGGGTTCAGTaGATTTCACAAAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPIGGVQ*ISQKEQ
Trigger: CTGTTCCTTTTGTGAAATCAACTGAACCCCACCTAT...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCATGGGAGTTGTACATGTaGGCTCTCCATACCACCGTT +
Preference number: 5 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSWELYM*ALHTTV
Trigger: AACGGTGGTATGGAGAGCCAACATGTACAACTCCCA...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTCAAAATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCCTGCATGGTTCAGTGTaGCCATCACTGCGCAACGCC +
Preference number: 5 (lower is better)
Translates to: VKMVVPIQLEDAKADIISLHGSV*PSLRNA
Trigger: GGCGTTGCGCAGTGATGGCAACACTGAACCATGCAG...GGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATCTGCATGGTTCAGTGTaGCCATCACTGCGCAACGCC +
Preference number: 5 (lower is better)
Translates to: HLELFWVALRRQSCFKYYLHGSV*PSLRNA
Trigger: GGCGTTGCGCAGTGATGGCAACACTGAACCATGCAG...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CATCACTGTCCTGAGACCCAGACCTTCAGGAGTCTCTTGATAAAGGCTGCTCCGTGCATCTCCAACAAATaGACAACCTTGACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: HHCPETQTFRSLLIKAAPCISNK*TTLTAE
Trigger: TTCTGCAGTCAAGGTTGTCAATTTGTTGGAGATGCA...CGGAGCAGCCTTTATCAAGAGACTCCTGAAGGTCTGGGTCTCAGGACAGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGGGAGGCCTGCGTGTGGTCCTAGCACTAAAACGTCTTaGAGAGAAGTATCACGAAAT +
Preference number: 5 (lower is better)
Translates to: CLSTLSDAAEAGRPACGPSTKTS*REVSRN
Trigger: ATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGCT...AGGACCACACGCAGGCCTCCCTGCCTCAGCTGCATCTGATAAAGTTGAGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GCAACGCCAGTACCAAACCACCCCATTTGGCAATCTAACACAGCTTCTGGCATATTGTTCTCCAAGTTGTaGGAATCTGCACCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: ATPVPNHPIWQSNTASGILFSKL*ESAPCK
Trigger: TTTGCACGGTGCAGATTCCAACAACTTGGAGAACAA...TATGCCAGAAGCTGTGTTAGATTGCCAAATGGGGTGGTTTGGTACTGGCGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp ATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTGTAGAAAAATTGTTCTCCAAGTaGTTGGAATCTGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: ILIFTQIYHQKASERCVEKLFSK*LESAPC
Trigger: GCACGGTGCAGATTCCAACAACTTGGAGAACAATTT...TTCTACACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVKLPRY*ARSGLL
Trigger: TAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTT...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: QILGEPVSVLDGQVLLHSKLPRY*ARSGLL
Trigger: TAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTT...GGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCATAGGTGGGGTTCAGTaGATTTCACAAAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVIGGVQ*ISQKEQ
Trigger: CTGTTCCTTTTGTGAAATCAACTGAACCCCACCTAT...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTATAGGTGGGGTTCAGTaGATTTCACAAAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLIGGVQ*ISQKEQ
Trigger: CTGTTCCTTTTGTGAAATCAACTGAACCCCACCTAT...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GAGACTGCATGGTTCAGTGTTGCCATCACTGCGCAACGCCTCTGCCACATCTCTAGATGTCTGTCTTCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: ETAWFSVAITAQRLCHISRCLSS*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGAAGACAGACATCT...AGAGATGTGGCAGAGGCGTTGCGCAGTGATGGCAACACTGAACCATGCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAACCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGEPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: KFILIFTQIYHQKASERCKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 5 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 5 (lower is better)
Translates to: WLSIPPFNSILKKGKVRWVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...CCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTATCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: PRRSLASPINIRFTSSCLSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: KFILIFTQIYHQKASERCWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...ACAGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGTGGGAGTTGTACATGTaGGCTCTCCATACCACCGTT +
Preference number: 5 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLWELYM*ALHTTV
Trigger: AACGGTGGTATGGAGAGCCAACATGTACAACTCCCA...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 5 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPTGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTGCATCTCCAACAAATaGACAACCTTGACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLCISNK*TTLTAE
Trigger: TTCTGCAGTCAAGGTTGTCAATTTGTTGGAGATGCA...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATGCACCTAGAACTGTTTaGGGTAGCCCTAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNAPRTV*GSPKKA
Trigger: TGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGC...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS TCA 90 bp GACTTGAATAAGAGCTTGGATGACAAAGGGAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAATGTAGTTTCTGATGTCCATCCTCTG +
Preference number: 5 (lower is better)
Translates to: DLNKSLDDKGSQLGL*CHVIQNVVSDVHPL
Trigger: CAGAGGATGGACATCAGAAACTACATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTGTCATCCAAGCTCTTATTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389118.8
ENST00000443155.5
ENST00000519130.5
ENST00000519256.5
ENST00000519944.1
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
ENST00000523727.1
CDS-3UTR CAA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCCTCAGCCTCTATTCTTaGTGTAAGATCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPLSLYS*CKISPY
Trigger: ATAGGGACTGATCTTACACAAAGAATAGAGGCTGAG...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTTTGTTCTCCAAGTTGTaGGAATCTGCACCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTLFSKL*ESAPCK
Trigger: TTTGCACGGTGCAGATTCCAACAACTTGGAGAACAA...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAAAATTGTTCTCCAAGTaGTTGGAATCTGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSKLFSK*LESAPC
Trigger: GCACGGTGCAGATTCCAACAACTTGGAGAACAATTT...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCTGGTTCCAGGAAAATaGTTCTCCAAGTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: ILGEPVSVLDGQVLLHSFLVPGK*FSKLLE
Trigger: TTCCAACAACTTGGAGAACAATTTTCCTGGAACCAG...GAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPKLPRY*ARSGLL
Trigger: TAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTT...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTATAGGTGGGGTTCAGTaGATTTCACAAAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTIGGVQ*ISQKEQ
Trigger: CTGTTCCTTTTGTGAAATCAACTGAACCCCACCTAT...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTCCTTCCCCAAGAACCACAGAATaGCAAGCTCTATTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: FWVNLSLFLTDRFCSTPSPRTTE*QALFSH
Trigger: ATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGG...GGAAGGAGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: HLELFWVALRRQSCFKYYSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: PEVAETMIVTDAKKREVFWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAACCTTGTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: SQSRIHGEGCISNKLTTLWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...CAAGGTTGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCAGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGCTTCTTCCAGACACACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: ARSKCSQPKVPNAASSRHTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...GTGTCTGGAAGAAGCAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATAACCTGTCTCTGTTCTaGACGGACAGGTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HLELFWVALRRQSCFKYYNLSLF*TDRFCS
Trigger: GGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTT...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GATAAAGGCTGCTCCGCACATGGTCAGAAAAGTCGGGTCAGCTCATCATGTCGAGAGATAGTAAAACACTaGACAGTGGACGATCTCAAA +
Preference number: 5 (lower is better)
Translates to: DKGCSAHGQKSRVSSSCREIVKH*TVDDLK
Trigger: TTTGAGATCGTCCACTGTCAAGTGTTTTACTATCTC...TCGACATGATGAGCTGACCCGACTTTTCTGACCATGTGCGGAGCAGCCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGGCAGATAGTTCTTCTTaGACACTGAGGGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLADSSS*TLRGRF
Trigger: AAACCTTCCCCTCAGTGTCAAAGAAGAACTATCTGC...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCCAAGATTTTCCGTTaGCTATTTTCTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLPKIFR*LFSAIC
Trigger: GCAGATGGCAGAAAATAGCAAACGGAAAATCTTGGG...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCGCTGAGCATAGGATGTaGTTCCTTGTTCTAATAAAA +
Preference number: 5 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVAEHRM*FLVLIK
Trigger: TTTTATTAGAACAAGGAACAACATCCTATGCTCAGC...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGGCTGAGCATAGGATGTaGTTCCTTGTTCTAATAAAA +
Preference number: 5 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLAEHRM*FLVLIK
Trigger: TTTTATTAGAACAAGGAACAACATCCTATGCTCAGC...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGGCTGAGCATAGGATGTaGTTCCTTGTTCTAATAAAA +
Preference number: 5 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLAEHRM*FLVLIK
Trigger: TTTTATTAGAACAAGGAACAACATCCTATGCTCAGC...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTAGCACTAAAACGTCTTaGAGAGAAGTATCACGAAAT +
Preference number: 5 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLSTKTS*REVSRN
Trigger: ATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGCT...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GAGTTGTACATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGCTGGTTCCAGGAAAATaGTTCTCCAAGTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: ELYMLALHTTVQQHSEEGLVPGK*FSKLLE
Trigger: TTCCAACAACTTGGAGAACAATTTTCCTGGAACCAG...CCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GAGTTGTACATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: ELYMLALHTTVQQHSEEGKLPRY*ARSGLL
Trigger: TAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTT...CCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCACCGTTCAACAGCATTCTGAAGAAGGGGAAGGTACGTTGGGTACATCCAGTCTGGATGCAGAAGTTTTaGGTAATTCTGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: PPFNSILKKGKVRWVHPVWMQKF*VILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCA...GACTGGATGTACCCAACGTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGAGATGTCTGTCTTCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: GEGTLGTSSQTAWCSWSLRCLSS*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGAAGACAGACATCT...CAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCAAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 5 (lower is better)
Translates to: VEGCSTPEVAETMIVTDAVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GAGTTGTACATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 5 (lower is better)
Translates to: ELYMLALHTTVQQHSEEGVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...CCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: VEGCSTPEVAETMIVTDAGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: PRTVLGSPKKAELLQILYSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: VPNAASSRHITNYSFNRFEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCAAGAAAAGGGAAGTGTTCACGCTGGGATCTGTTTaGCATAAGTTCTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: PEVAETMIVTDAKKREVFTLGSV*HKFCHK
Trigger: CTTATGGCAGAACTTATGCAAAACAGATCCCAGCGT...GAACACTTCCCTTTTCTTGGCATCAGTGACAATCATAGTCTCAGCGACTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATACGCTGGGATCTGTTTaGCATAAGTTCTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNTLGSV*HKFCHK
Trigger: CTTATGGCAGAACTTATGCAAAACAGATCCCAGCGT...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCATTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPLSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 5 (lower is better)
Translates to: HEDRHHLLQDIWVLLHKMTGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATGTCCTGAAATACTTCTCATaGAGCAGGATGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: TGACGFTYCSTVRPTFHVLKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAG...GACATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCCTGAAATACTTCTCATaGAGCAGGATGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTLKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAG...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAAACCTGTCTCTGTTCTaGACGGACAGGTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKNLSLF*TDRFCS
Trigger: GGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTT...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: SDDDESDRSQGRRNPSWITFRSL*IKAAPH
Trigger: GTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGT...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGTAGTGCTTCCAGGCTCGTTCTAAATGCTCACAGCCCAAAGTCCCTAACGCTGTGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: CSASRLVLNAHSPKSLTLCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...CAGCGTTAGGGACTTTGGGCTGTGAGCATTTAGAACGAGCCTGGAAGCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: QCKGNPSKISCQPDQHTLKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...AAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCTGCACAGAGCTGGTATaGTCACAGTGTAATAAGGAT +
Preference number: 5 (lower is better)
Translates to: VEGCSTPEVAETMIVTDACTELV*SQCNKD
Trigger: ATCCTTATTACACTGTGACAATACCAGCTCTGTGCA...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp GTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGATGCCATGATCTTCCCAGCCTaGCTAATTGAGATGGAGATT +
Preference number: 5 (lower is better)
Translates to: VEGCSTPEVAETMIVTDAMIFPA*LIEMEI
Trigger: AATCTCCATCTCAATTAGCAAGGCTGGGAAGATCAT...GGCATCAGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp AACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGCTCAGCCTCTATTCTTaGTGTAAGATCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: NMVKLHLLQDIWVLLHKMLSLYS*CKISPY
Trigger: ATAGGGACTGATCTTACACAAAGAATAGAGGCTGAG...CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR CAA 90 bp TATTGTAGCAAGTCACTGTGGGACACTGACAGCAGCATTTTGACAAAAGCCTGGCTCAGCCTCTATTCTTaGTGTAAGATCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: YCSKSLWDTDSSILTKAWLSLYS*CKISPY
Trigger: ATAGGGACTGATCTTACACAAAGAATAGAGGCTGAG...CCAGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCCTCAGCCTCTATTCTTaGTGTAAGATCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: IRSFSRKKKPELDRFATSLSLYS*CKISPY
Trigger: ATAGGGACTGATCTTACACAAAGAATAGAGGCTGAG...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACAGCTGAGCATAGGATGTaGTTCCTTGTTCTAATAAAA +
Preference number: 5 (lower is better)
Translates to: LCSVQRQSLEDLLPARSTAEHRM*FLVLIK
Trigger: TTTTATTAGAACAAGGAACAACATCCTATGCTCAGC...TGTTGATCGGGCTGGCAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACGCTGAGCATAGGATGTaGTTCCTTGTTCTAATAAAA +
Preference number: 5 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHAEHRM*FLVLIK
Trigger: TTTTATTAGAACAAGGAACAACATCCTATGCTCAGC...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTTTCTCTGAAGACAAATaGGTCTTTCTGAACCTCAAA +
Preference number: 5 (lower is better)
Translates to: DRFWVNLSLFLTDRFCSTFSEDK*VFLNLK
Trigger: TTTGAGGTTCAGAAAGACCAATTTGTCTTCAGAGAA...AGTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNKLPRY*ARSGLL
Trigger: TAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTT...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCACTCCCAGCTGATAATTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSLPADN*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAG...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACTGCGCAACGCCTCTGCCACATCTCTTCTGAATACAGACAGATTTTGGGTGAACTCCCAGCTGATAATTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: TAQRLCHISSEYRQILGELPADN*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAG...TTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGCGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCATAGGTGGGGTTCAGTaGATTTCACAAAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: IRSFSRKKKPELDRFATSIGGVQ*ISQKEQ
Trigger: CTGTTCCTTTTGTGAAATCAACTGAACCCCACCTAT...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTGGATGCAGAAGTTTTaGGTAATTCTGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: PVKQHGVAGLCVQCKGNPWMQKF*VILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCA...GGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGGACAGGTTCTGCTCCACTGGATGCAGAAGTTTTaGGTAATTCTGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: RQILGEPVSVLDGQVLLHWMQKF*VILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCA...GTGGAGCAGAACCTGTCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GAGTTGTACATGTTGGCTCTCCATACCACCGTTCAACAGCATTCTGAAGAAGGGCCAAGAACCACAGAATaGCAAGCTCTATTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: ELYMLALHTTVQQHSEEGPRTTE*QALFSH
Trigger: ATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGG...CCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 5 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: IRSFSRKKKPELDRFATSGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AAAGACAATGGTGTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: KDNGVHEDRHHLLQDIWVGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...AACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAACACCATTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: QHEILKFILIFTQIYHQKEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGGAAGGGGAAGGTACGTaGGGTACATCCAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: NAASSRHITNYSFNRFQWEGEGT*GTSSQT
Trigger: TGTTTGACTGGATGTACCCAACGTACCTTCCCCTTC...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTGGGAGTTGTACATGTaGGCTCTCCATACCACCGTT +
Preference number: 5 (lower is better)
Translates to: PRTVLGSPKKAELLQILYWELYM*ALHTTV
Trigger: AACGGTGGTATGGAGAGCCAACATGTACAACTCCCA...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGTGGGAGTTGTACATGTaGGCTCTCCATACCACCGTT +
Preference number: 5 (lower is better)
Translates to: NAASSRHITNYSFNRFQWWELYM*ALHTTV
Trigger: AACGGTGGTATGGAGAGCCAACATGTACAACTCCCA...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TTAGCACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATAGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LAPRTVLGSPKKAELLQIVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...TATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCAGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTACGCTGGGATCTGTTTaGCATAAGTTCTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFTLGSV*HKFCHK
Trigger: CTTATGGCAGAACTTATGCAAAACAGATCCCAGCGT...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTACGCTGGGATCTGTTTaGCATAAGTTCTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSTLGSV*HKFCHK
Trigger: CTTATGGCAGAACTTATGCAAAACAGATCCCAGCGT...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGTTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: IQLEDAKADIISTQGRLELSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATTTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: HLELFWVALRRQSCFKYYLSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CTTTTGAGAGGCTCCCAAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 5 (lower is better)
Translates to: LLRGSQGTGSDYHKCKPFTGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...AAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCTCTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATCTGAAATACTTCTCATaGAGCAGGATGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PRTVLGSPKKAELLQILYLKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAG...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTCTGCATGGTTCAGTGTaGCCATCACTGCGCAACGCC +
Preference number: 5 (lower is better)
Translates to: VLEITGSYLPQYLRFVTILHGSV*PSLRNA
Trigger: GGCGTTGCGCAGTGATGGCAACACTGAACCATGCAG...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCACCTTCAGGAGTCTCTaGATAAAGGCTGCTCCGCAC +
Preference number: 5 (lower is better)
Translates to: ITNYSFNRFQWHSSQSRITFRSL*IKAAPH
Trigger: GTGCGGAGCAGCCTTTATCAAGAGACTCCTGAAGGT...GATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AAGGGGAAGGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: KGKVRWVHPVKQHGVAGLCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...AAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACCTTCCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGTACGTTGGGTACATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAAGTTTTTGTGGAGAGTaGGAAACCAGCTATTTCTCA +
Preference number: 5 (lower is better)
Translates to: GTLGTSSQTAWCSWSLCSSFCGE*ETSYFS
Trigger: TGAGAAATAGCTGGTTTCCAACTCTCCACAAAAACT...TGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAACGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS TCA 90 bp CAGGCTCCTGTTAGATGGAAAGGCTCGCTTACCAGGTTCATTTCCTaGGTCAATTCAGAAAGGATTATTACTCCTATTATGCAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: QAPVRWKGSLTRFIS*VNSERIITPIMQCS
Trigger: GGAACACTGCATAATAGGAGTAATAATCCTTTCTGAATTGACTCAGGAAATGAACCTGGTAAGCGAGCCTTTCCATCTAACAGGAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523727.1
CDS-3UTR CAA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTACTCAGCCTCTATTCTTaGTGTAAGATCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: PRRSLASPINIRFTSSCLLSLYS*CKISPY
Trigger: ATAGGGACTGATCTTACACAAAGAATAGAGGCTGAG...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CGCTGTGTAGAAGGTTGTTCGACACCTGAAGTCGCTGAGACTATGATTGTCACTGCTGAGCATAGGATGTaGTTCCTTGTTCTAATAAAA +
Preference number: 5 (lower is better)
Translates to: RCVEGCSTPEVAETMIVTAEHRM*FLVLIK
Trigger: TTTTATTAGAACAAGGAACAACATCCTATGCTCAGC...AGTGACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAGGCAGACTTGAGGTTTTGAAAGACATGTaGCTGCAAGGAGCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: IQLEDAKADIISTQGRLEVLKDM*LQGAEH
Trigger: ATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAAC...CTCAAGTCTGCCTTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGTTCTCTGAAGACAAATaGGTCTTTCTGAACCTCAAA +
Preference number: 5 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLFSEDK*VFLNLK
Trigger: TTTGAGGTTCAGAAAGACCAATTTGTCTTCAGAGAA...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTTTCTCTGAAGACAAATaGGTCTTTCTGAACCTCAAA +
Preference number: 5 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSAFSEDK*VFLNLK
Trigger: TTTGAGGTTCAGAAAGACCAATTTGTCTTCAGAGAA...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCCCTCGAAGATCTCTTGAGCACTAAAACGTCTTaGAGAGAAGTATCACGAAAT +
Preference number: 5 (lower is better)
Translates to: WCSWSLCSVQRQSLEDLLSTKTS*REVSRN
Trigger: ATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGCT...CAAGAGATCTTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGATTGTTCTCCAAGTTGTaGGAATCTGCACCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRLFSKL*ESAPCK
Trigger: TTTGCACGGTGCAGATTCCAACAACTTGGAGAACAA...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CACCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATAAATTGTTCTCCAAGTaGTTGGAATCTGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: HLELFWVALRRQSCFKYYKLFSK*LESAPC
Trigger: GCACGGTGCAGATTCCAACAACTTGGAGAACAATTT...ATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGCTGGTTCCAGGAAAATaGTTCTCCAAGTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWLVPGK*FSKLLE
Trigger: TTCCAACAACTTGGAGAACAATTTTCCTGGAACCAG...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATCTCCCAGCTGATAATTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNLPADN*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAG...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGAAACATGGTGAAACTCCACCTGCTGCAGGACATCTGGGTTTTGCTGCATAAATGGATGCAGAAGTTTTaGGTAATTCTGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: GNMVKLHLLQDIWVLLHKWMQKF*VILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCA...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGGTGGAGTTTCACCATGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR CAA 90 bp ATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACAAGCCCAAGAACCACAGAATaGCAAGCTCTATTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: IRSFSRKKKPELDRFATSPRTTE*QALFSH
Trigger: ATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGG...GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAATGCCAAGAACCACAGAATaGCAAGCTCTATTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: HEDRHHLLQDIWVLLHKMPRTTE*QALFSH
Trigger: ATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGG...CATTTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGGCGAGTGAGCGCTAGATGTCTGTCTTCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: SNSSSSSPRSTIRRRVSARCLSS*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGAAGACAGACATCT...AGCGCTCACTCGCCTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTCCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: VLEITGSYLPQYLRFVTIPSWIG*PQALHR
Trigger: CCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGG...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTAGAACTGTTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATAAGAAGAAACCCGAGTaGGATAGGTTTGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: PRTVLGSPKKAELLQILYKKKPE*DRFATS
Trigger: GCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTT...ATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAACAGTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTTCCCTCGAAGATCTCTaGCCAGCCCGATCAACATAC +
Preference number: 5 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVSLEDL*PARSTY
Trigger: GTATGTTGATCGGGCTGGCAAGAGATCTTCGAGGGA...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGTGGTGTAGCTGGTCTTaGTGTTCAGTGCAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: NAASSRHITNYSFNRFQWWCSWS*CSVQRQ
Trigger: TTGCCTTTGCACTGAACACAAAGACCAGCTACACCA...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AAACATACTGAAGCTGTGGATAAATTCAGAGCTTTAGGAACATGGCCTCAGGCTGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: KHTEAVDKFRALGTWPQAVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...AGCCTGAGGCCATGTTCCTAAAGCTCTGAATTTATCCACAGCTTCAGTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389118.8
CDS-3UTR CAA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCACGCTGGGATCTGTTTaGCATAAGTTCTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: VPNAASSRHITNYSFNRFTLGSV*HKFCHK
Trigger: CTTATGGCAGAACTTATGCAAAACAGATCCCAGCGT...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 5 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTTGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATGGTTGTCCCCATACAACTTGAAGACGCCAAAGCTGACATAATTTCCACACAAACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 5 (lower is better)
Translates to: MVVPIQLEDAKADIISTQTGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGGCACCTAGAACTGTTTaGGGTAGCCCTAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: QDLITISANHFTSFSEEKAPRTV*GSPKKA
Trigger: TGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGC...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTTCATGAGGACAGACATCATCTGCTGCAGGACATCTGGGTTTTGCTGCATAAAAGTTTTTGTGGAGAGTaGGAAACCAGCTATTTCTCA +
Preference number: 5 (lower is better)
Translates to: VHEDRHHLLQDIWVLLHKSFCGE*ETSYFS
Trigger: TGAGAAATAGCTGGTTTCCAACTCTCCACAAAAACT...TTTATGCAGCAAAACCCAGATGTCCTGCAGCAGATGATGTCTGTCCTCATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATTCGTCTCAATCCAGGATCCATGGTGAAGGCTGCATCTCCAACAAATTGACAGCTGAGCATAGGATGTaGTTCCTTGTTCTAATAAAA +
Preference number: 5 (lower is better)
Translates to: HSSQSRIHGEGCISNKLTAEHRM*FLVLIK
Trigger: TTTTATTAGAACAAGGAACAACATCCTATGCTCAGC...TGTCAATTTGTTGGAGATGCAGCCTTCACCATGGATCCTGGATTGAGACGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATATTGTTCTCCAAGTTGTaGGAATCTGCACCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: SDDDESDRSQGRRNPSWILFSKL*ESAPCK
Trigger: TTTGCACGGTGCAGATTCCAACAACTTGGAGAACAA...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCATCAGAAGAAATTGTTCTCCAAGTaGTTGGAATCTGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: QHEILKFILIFTQIYHQKKLFSK*LESAPC
Trigger: GCACGGTGCAGATTCCAACAACTTGGAGAACAATTT...CTTCTGATGGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAAAATTGTTCTCCAAGTaGTTGGAATCTGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: SDDDESDRSQGRRNPSWIKLFSK*LESAPC
Trigger: GCACGGTGCAGATTCCAACAACTTGGAGAACAATTT...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGACTGGTTCCAGGAAAATaGTTCTCCAAGTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRLVPGK*FSKLLE
Trigger: TTCCAACAACTTGGAGAACAATTTTCCTGGAACCAG...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAAAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGEKLPRY*ARSGLL
Trigger: TAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTT...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGTTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: QDLITISANHFTSFSEEKLSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGTTGTCCCCATACAACTaGAAGACGCCAAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMLSPYN*KTPKLT
Trigger: TGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAA...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CATCCAGTCAAACAGCATGGTGTAGCTGGTCTTTGTGTTCAGTGCAAAGGCAATTGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: HPVKQHGVAGLCVQCKGNCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...ATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTGGAGGAGACAACTGTATCAAGAGTAGTGAGTCCCTCTGAGATAGATGTGAGATGTTGCTTGTATGTTTaGAAAAATACATTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: LEETTVSRVVSPSEIDVRCCLYV*KNTFPW
Trigger: CCAGGGGAATGTATTTTTCAAAACATACAAGCAACA...TCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTGAGATAGTAAAACACTaGACAGTGGACGATCTCAAA +
Preference number: 5 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSEIVKH*TVDDLK
Trigger: TTTGAGATCGTCCACTGTCAAGTGTTTTACTATCTC...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTTGCCACCCAAGGAAGCTGATTaGCTACTGAAACTCAATTAT +
Preference number: 5 (lower is better)
Translates to: DESDRSQGRRNPSWIGLPPKEAD*LLKLNY
Trigger: ATAATTGAGTTTCAGTAGCAAATCAGCTTCCTTGGG...TGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp TCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAAATTATGAAAAGCCCTaGGCCTTTTCCCAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SDDDESDRSQGRRNPSWINYEKP*AFSQGS
Trigger: GCTTCCTTGGGAAAAGGCCAAGGGCTTTTCATAATT...TATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTAGCACTAAAACGTCTTaGAGAGAAGTATCACGAAAT +
Preference number: 5 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSSTKTS*REVSRN
Trigger: ATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGCT...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAAAATTGTTCTCCAAGTaGTTGGAATCTGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: KGQDLITISANHFTSFSEKLFSK*LESAPC
Trigger: GCACGGTGCAGATTCCAACAACTTGGAGAACAATTT...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAAATAGGTGGGGTTCAGTaGATTTCACAAAAGGAACAG +
Preference number: 5 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKIGGVQ*ISQKEQ
Trigger: CTGTTCCTTTTGTGAAATCAACTGAACCCCACCTAT...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATGCAGAAGTTTTaGGTAATTCTGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSWMQKF*VILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCA...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTATGGATGCAGAAGTTTTaGGTAATTCTGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: PRRSLASPINIRFTSSCLWMQKF*VILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCA...TAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTAGATGTCTGTCTTCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: PGSDDDESDRSQGRRNPSRCLSS*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGAAGACAGACATCT...ACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGAGATGTCTGTCTTCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: GSDDDESDRSQGRRNPSWRCLSS*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGAAGACAGACATCT...CCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCGTTTCAAGATGGGAGTaGTACATGTTGGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: WVALRRQSCFKYYILIVTVSRWE*YMLALH
Trigger: ATGGAGAGCCAACATGTACAACTCCCATCTTGAAAC...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGACGCTGGGATCTGTTTaGCATAAGTTCTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMTLGSV*HKFCHK
Trigger: CTTATGGCAGAACTTATGCAAAACAGATCCCAGCGT...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGACAGGAGGCTCTAAGTaGATGATGAAGCTCATATGG +
Preference number: 5 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQTGGSK*MMKLIW
Trigger: CCATATGAGCTTCATCATCAACTTAGAGCCTCCTGT...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GTCCTTGAAATTACAGGCTCATATCTTCCCCAGTATTTAAGGTTTGTAACAATTCTGAAATACTTCTCATaGAGCAGGATGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VLEITGSYLPQYLRFVTILKYFS*SRMSPR
Trigger: CCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAG...AATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCCTGTAATTTCAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACTGTGATCCCTGGTTCAGATGATGATGAATCAGATCGTTCTCAAGGAAGAAGATCACATAGGAGAAACTaGTTTCAAAGCCAACTTGCT +
Preference number: 5 (lower is better)
Translates to: TVIPGSDDDESDRSQGRRSHRRN*FQSQLA
Trigger: AGCAAGTTGGCTTTGAAACAAGTTTCTCCTATGTGA...TCTTCTTCCTTGAGAACGATCTGATTCATCATCATCTGAACCAGGGATCACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519256.5
CDS-3UTR CAA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAATGCATCTCCAACAAATaGACAACCTTGACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKCISNK*TTLTAE
Trigger: TTCTGCAGTCAAGGTTGTCAATTTGTTGGAGATGCA...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTGCACCTAGAACTGTTTaGGGTAGCCCTAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FWVALRRQSCFKYYILIVAPRTV*GSPKKA
Trigger: TGCCTTCTTAGGGCTACCCAAAACAGTTCTAGGTGC...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCCATGGTGAAGAGATAGTAAAACACTaGACAGTGGACGATCTCAAA +
Preference number: 5 (lower is better)
Translates to: YSFNRFQWHSSQSRIHGEEIVKH*TVDDLK
Trigger: TTTGAGATCGTCCACTGTCAAGTGTTTTACTATCTC...TTCACCATGGATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCTTCTCTGAAGACAAATaGGTCTTTCTGAACCTCAAA +
Preference number: 5 (lower is better)
Translates to: VPNAASSRHITNYSFNRFFSEDK*VFLNLK
Trigger: TTTGAGGTTCAGAAAGACCAATTTGTCTTCAGAGAA...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp ACATCTCTTCTGAATACAGACAGATTTTGGGTGAACCTGTCTCTGTTCTTGACGAGCACTAAAACGTCTTaGAGAGAAGTATCACGAAAT +
Preference number: 5 (lower is better)
Translates to: TSLLNTDRFWVNLSLFLTSTKTS*REVSRN
Trigger: ATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGCT...CGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTAAGAGGCAGCATGAAATTCTCAAATTCATCCTCATCTTCACCCAGATCTACCAGCACTAAAACGTCTTaGAGAGAAGTATCACGAAAT +
Preference number: 5 (lower is better)
Translates to: VRGSMKFSNSSSSSPRSTSTKTS*REVSRN
Trigger: ATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGCT...GGTAGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCAGCACTAAAACGTCTTaGAGAGAAGTATCACGAAAT +
Preference number: 5 (lower is better)
Translates to: VPNAASSRHITNYSFNRFSTKTS*REVSRN
Trigger: ATTTCGTGATACTTCTCTCAAAGACGTTTTAGTGCT...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCCTGGTTCCAGGAAAATaGTTCTCCAAGTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: WVALRRQSCFKYYILIVTLVPGK*FSKLLE
Trigger: TTCCAACAACTTGGAGAACAATTTTCCTGGAACCAG...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AAGTCATTTAATTGTGTTACTGTCTCTCAACTTTATCAGATGCAGCTGAGGCAGCTGGTTCCAGGAAAATaGTTCTCCAAGTTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: KSFNCVTVSQLYQMQLRQLVPGK*FSKLLE
Trigger: TTCCAACAACTTGGAGAACAATTTTCCTGGAACCAG...CTGCCTCAGCTGCATCTGATAAAGTTGAGAGACAGTAACACAATTAAATGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATCTCCCAGCTGATAATTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHLPADN*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAG...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TCGAAGATCTCTTGCCAGCCCGATCAACATACGCTTTACATCTTCTTGTTTAAACCAAGAACCACAGAATaGCAAGCTCTATTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SKISCQPDQHTLYIFLFKPRTTE*QALFSH
Trigger: ATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGG...TTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATCTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAG +
Preference number: 5 (lower is better)
Translates to: WVALRRQSCFKYYILIVTVSRTW*SSVIPK
Trigger: CTTAGGAATAACAGATGACAACCACGTTCTAGAGAC...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AAGGGACAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: KGQDLITISANHFTSFSEGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...TTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389118.8
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCGGAACTGAAGAGTCCTaGAAATTACAGGCTCATATC +
Preference number: 5 (lower is better)
Translates to: ITNYSFNRFQWHSSQSRIGTEES*KLQAHI
Trigger: GATATGAGCCTGTAATTTCAAGGACTCTTCAGTTCC...GATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGGAGATAGTAAAACACTaGACAGTGGACGATCTCAAA +
Preference number: 5 (lower is better)
Translates to: NAASSRHITNYSFNRFQWEIVKH*TVDDLK
Trigger: TTTGAGATCGTCCACTGTCAAGTGTTTTACTATCTC...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CTGTTTATCAAACTTGCTCTCAGTTCACTGAAATACTTCTCATTGAGCAGGATGCTCCAGCAACTTCCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: LFIKLALSSLKYFSLSRMLQQLP*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGGAAGTTGCTGGAG...CATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522066.5
CDS-3UTR CAA 90 bp GTCCCTAACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCTACGAGCATATACCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: VPNAASSRHITNYSFNRFYEHIP*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGGTATATGCTCGTA...GAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTTAGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523189.6
CDS CCA 90 bp AAAGAATCACATTCAGCTAATAAAGGCAATCAGAACTCTGAATGTTaGAGGACACTCACAAAGCTTCTGGAGAACAATCCTATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: KESHSANKGNQNSEC*RTLTKLLENNPISK
Trigger: CTTGGAAATAGGATTGTTCTCCAGAAGCTTTGTGAGTGTCCTCCAACATTCAGAGTTCTGATTGCCTTTATTAGCTGAATGTGATTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519130.5
CDS-3UTR CAA 90 bp AACGCTGCTTCTTCCAGACACATAACAAACTACTCATTTAACAGGTTCCAATGGTTCTCTGAAGACAAATaGGTCTTTCTGAACCTCAAA +
Preference number: 5 (lower is better)
Translates to: NAASSRHITNYSFNRFQWFSEDK*VFLNLK
Trigger: TTTGAGGTTCAGAAAGACCAATTTGTCTTCAGAGAA...CCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCTGGAAGAAGCAGCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTTTGTTCTCCAAGTTGTaGGAATCTGCACCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: FWVALRRQSCFKYYILIVLFSKL*ESAPCK
Trigger: TTTGCACGGTGCAGATTCCAACAACTTGGAGAACAA...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TTTTGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTAAATTGTTCTCCAAGTaGTTGGAATCTGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: FWVALRRQSCFKYYILIVKLFSK*LESAPC
Trigger: GCACGGTGCAGATTCCAACAACTTGGAGAACAATTT...AACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp CAGGATCTGATTACCATAAGTGCAAACCATTTTACTAGCTTCTCTGAAGAGAAGCTCCCAGCTGATAATTaGTCTTTAAACGAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: QDLITISANHFTSFSEEKLPADN*SLNEPK
Trigger: TTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAG...CTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
CDS-3UTR CAA 90 bp ACAACAGGAGCCTGTGGATTTACTTATTGTTCAACAGTAAGGCCAACCTTTCATTGGATGCAGAAGTTTTaGGTAATTCTGTGCATTTTG +
Preference number: 5 (lower is better)
Translates to: TTGACGFTYCSTVRPTFHWMQKF*VILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCA...ATGAAAGGTTGGCCTTACTGTTGAACAATAAGTAAATCCACAGGCTCCTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AGACACATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCCCAAGAACCACAGAATaGCAAGCTCTATTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: RHITNYSFNRFQWHSSQSPRTTE*QALFSH
Trigger: ATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGG...GGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTATGTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCCCAAGAACCACAGAATaGCAAGCTCTATTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: WVALRRQSCFKYYILIVTPRTTE*QALFSH
Trigger: ATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGG...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp TGGGTAGCCCTAAGAAGGCAGAGCTGCTTCAAATATTATATTCTAATAGTTACCACATTGTCAAAATGGTaGTCCCCATACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: WVALRRQSCFKYYILIVTTLSKW*SPYNLK
Trigger: CTTCAAGTTGTATGGGGACAACCATTTTGACAATGT...GGTAACTATTAGAATATAATATTTGAAGCAGCTCTGCCTTCTTAGGGCTACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS-3UTR CAA 90 bp AAGATGTTAGCCAGATTATCCCTTCAACTCCAACATAAACAATCATTTGGGGGATTCTCTGAAGACAAATaGGTCTTTCTGAACCTCAAA +
Preference number: 5 (lower is better)
Translates to: KMLARLSLQLQHKQSFGGFSEDK*VFLNLK
Trigger: TTTGAGGTTCAGAAAGACCAATTTGTCTTCAGAGAA...TCCCCCAAATGATTGTTTATGTTGGAGTTGAAGGGATAATCTGGCTAACATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS-3UTR CAA 90 bp ATAACAAACTACTCATTTAACAGGTTCCAATGGCATTCGTCTCAATCCAGGATCAAGAAGTTAGGGCTTTaGCTGTTGCTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: ITNYSFNRFQWHSSQSRIKKLGL*LLLVCF
Trigger: AAAACATACAAGCAACAGCAAAAGCCCTAACTTCTT...GATCCTGGATTGAGACGAATGCCATTGGAACCTGTTAAATGAGTAGTTTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519949.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
CDS TCA 90 bp AGAGAGAAAACAAGATTGGCCATGAGTTGCTACTGTTTAACTGGCTaGCAGGTTAACTGGTTATACTATTCTATCTACTTTTGTGTATGT +
Preference number: 5 (lower is better)
Translates to: REKTRLAMSCYCLTG*QVNWLYYSIYFCVC
Trigger: ACATACACAAAAGTAGATAGAATAGTATAACCAGTTAACCTGTCAGCCAGTTAAACAGTAGCAACTCATGGCCAATCTTGTTTTCTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519130.5
CDS-3UTR CAA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTAGATGTCTGTCTTCTTaGAGGTTCTTTGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVRCLSS*RFFEVD
Trigger: ATCAACTTCAAAGAACCTCAAAGAAGACAGACATCT...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS-3UTR CAA 90 bp AGGTTTGTAACAATTTTTGTCATGAACGTCTCTAGAACGTGGTTGTCATCTGTTTTAGTTCATTTAGCTTaGTTTCCTCTTCCCTACTGT +
Preference number: 5 (lower is better)
Translates to: RFVTIFVMNVSRTWLSSVLVHLA*FPLPYC
Trigger: ACAGTAGGGAAGAGGAAACAAAGCTAAATGAACTAA...AACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520864.5
CDS GCA 72 bp GGGCGCCGCGGAAGCCCCAGACGCCCGCGGGGTCCCTaGGCCGCTCGTCCTTCGCAGCCTCAGCCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: GRRGSPRRPRGP*AARPSQPQPGF
Trigger: GAAGCCTGGCTGAGGCTGCGAAGGACGAGCGGCGCAGGGACCCCGCGGGCGTCTGGGGCTTCCGCGGCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443155.5
CDS TCA 72 bp TCACATCTGCTGACCGTGCACAACTGCTCCAACTGCTaGAACACAGTGGCAGTATCATCCAGTGGATCATCT +
Preference number: 6 (lower is better)
Translates to: SHLLTVHNCSNC*NTVAVSSSGSS
Trigger: AGATGATCCACTGGATGATACTGCCACTGTGTTTCAGCAGTTGGAGCAGTTGTGCACGGTCAGCAGATGTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389118.8
ENST00000517629.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000520879.5
ENST00000522066.5
ENST00000522380.2
ENST00000522533.5
ENST00000523189.6
CDS TCA 72 bp AAGAGCTTGGATGACAAAGGGAGCCAGCTTGGGCTGTaGTGCCACGTAATTCAGAATGTAGTTTCTGATGTC +
Preference number: 6 (lower is better)
Translates to: KSLDDKGSQLGL*CHVIQNVVSDV
Trigger: GACATCAGAAACTACATTCTGAATTACGTGGCATCACAGCCCAAGCTGGCTCCCTTTGTCATCCAAGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000389118.8
ENST00000443155.5
ENST00000519130.5
ENST00000519256.5
ENST00000519944.1
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
ENST00000523727.1
CDS CAA 90 bp GAATCAGATCGTTCTCAAGGAAGAAGAAACCCGAGTTGGATAGGTTaGCCACAAGCCCTTCACAGGAAGATGTCTGTCTTCTTTGAGGTT +
Preference number: 6 (lower is better)
Translates to: ESDRSQGRRNPSWIG*PQALHRKMSVFFEV
Trigger: AACCTCAAAGAAGACAGACATCTTCCTGTGAAGGGCTTGTGGCAAACCTATCCAACTCGGGTTTCTTCTTCCTTGAGAACGATCTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389118.8
ENST00000518492.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522533.5
CDS CAA 72 bp CTCAAACCACCCCAACTTAGTGATTTTAGCAATGACTaGAATAAGAGCTTGGATGACAAAGGGAGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: LKPPQLSDFSND*NKSLDDKGSQL
Trigger: AAGCTGGCTCCCTTTGTCATCCAAGCTCTTATTCAAGTCATTGCTAAAATCACTAAGTTGGGGTGGTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000389118.8
ENST00000443155.5
ENST00000519130.5
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
ENST00000523189.6
ENST00000523727.1
CDS CCA 72 bp CATTCAGCTAATAAAGGCAATCAGAACTCTGAATGTTaGAGGACACTCACAAAGCTTCTGGAGAACAATCCT +
Preference number: 6 (lower is better)
Translates to: HSANKGNQNSEC*RTLTKLLENNP
Trigger: AGGATTGTTCTCCAGAAGCTTTGTGAGTGTCCTCCAACATTCAGAGTTCTGATTGCCTTTATTAGCTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519130.5
CDS CAA 90 bp AGGGAAGTGTTCACTATTTTTGTCATGAACGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAGACTTCTGACATACGAGCATATACC +
Preference number: 6 (lower is better)
Translates to: REVFTIFVMNVSRTW*SSVIPKTSDIRAYT
Trigger: GGTATATGCTCGTATGTCAGAAGTCTTAGGAATAACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATAGTGAACACTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521759.5
ENST00000523665.5
CDS TCA 72 bp GTTAGATGGAAAGGCTCGCTTACCAGGTTCATTTCCTaGGTCAATTCAGAAAGGATTATTACTCCTATTATG +
Preference number: 6 (lower is better)
Translates to: VRWKGSLTRFIS*VNSERIITPIM
Trigger: CATAATAGGAGTAATAATCCTTTCTGAATTGACTCAGGAAATGAACCTGGTAAGCGAGCCTTTCCATCTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523727.1
CDS GCA 72 bp AAAACTCGACAGGATAATTCTCCATCCATAGCATCATaGTCATCTGTACTGGTATATGTTAATCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: KTRQDNSPSIAS*SSVLVYVNLPP
Trigger: AGGAGGAAGATTAACATATACCAGTACAGATGAGCATGATGCTATGGATGGAGAATTATCCTGTCGAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000521165.1
ENST00000522066.5
ENST00000522380.2
ENST00000522533.5
ENST00000523189.6
CDS CCA 72 bp TTCCTGAATGGTGATGTCCACAGTTACACCAGAATATaGATGCAGAAGTTTTTGGTAATTCTGTGCATTTTG +
Preference number: 6 (lower is better)
Translates to: FLNGDVHSYTRI*MQKFLVILCIL
Trigger: CAAAATGCACAGAATTACCAAAAACTTCTGCATCCATATTCTGGTGTAACTGTGGACATCACCATTCAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000389118.8
ENST00000517629.1
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000520879.5
ENST00000522066.5
ENST00000522380.2
ENST00000522533.5
ENST00000523189.6
CDS CAA 90 bp TTTCACAGCATCTATATTTTTGTCATGAACGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAGACTTCTGACATACGAGCATATACC +
Preference number: 6 (lower is better)
Translates to: FHSIYIFVMNVSRTW*SSVIPKTSDIRAYT
Trigger: GGTATATGCTCGTATGTCAGAAGTCTTAGGAATAACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATATAGATGCTGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520586.5
CDS TCA 72 bp ACAAGATTGGCCATGAGTTGCTACTGTTTAACTGGCTaGCAGGTTAACTGGTTATACTATTCTATCTACTTT +
Preference number: 6 (lower is better)
Translates to: TRLAMSCYCLTG*QVNWLYYSIYF
Trigger: AAAGTAGATAGAATAGTATAACCAGTTAACCTGTCAGCCAGTTAAACAGTAGCAACTCATGGCCAATCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519130.5
CDS CAA 72 bp TTCACTATTTTTGTCATGAACGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAGACTTCTGACATACGA +
Preference number: 6 (lower is better)
Translates to: FTIFVMNVSRTW*SSVIPKTSDIR
Trigger: TCGTATGTCAGAAGTCTTAGGAATAACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATAGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521759.5
ENST00000523665.5
CDS CAA 90 bp TTTTCAAGTATCCTTTTTACTCCCTTAATTAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTAAATAAGGACCTTCTTGTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: FSSILFTPLIKLPRY*ARSGLLNKDLLVEA
Trigger: TGCTTCGACAAGAAGGTCCTTATTTAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTTAATTAAGGGAGTAAAAAGGATACTTGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
ENST00000522734.1
ENST00000523189.6
CDS CAA 72 bp ATCCTTTTTACTCCCTTAATTAAATTACCAAGGTACTaGGCACGTTCAGGACTGTTAAATAAGGACCTTCTT +
Preference number: 6 (lower is better)
Translates to: ILFTPLIKLPRY*ARSGLLNKDLL
Trigger: AAGAAGGTCCTTATTTAACAGTCCTGAACGTGCCAAGTACCTTGGTAATTTAATTAAGGGAGTAAAAAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000389118.8
ENST00000519256.5
ENST00000519949.5
ENST00000520864.5
ENST00000522066.5
ENST00000522533.5
ENST00000522734.1
ENST00000523189.6
CDS CAA 72 bp ATCTATATTTTTGTCATGAACGTCTCTAGAACGTGGTaGTCATCTGTTATTCCTAAGACTTCTGACATACGA +
Preference number: 6 (lower is better)
Translates to: IYIFVMNVSRTW*SSVIPKTSDIR
Trigger: TCGTATGTCAGAAGTCTTAGGAATAACAGATGACAACCACGTTCTAGAGACGTTCATGACAAAAATATAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520586.5
CDS CAA 72 bp ACTTTCAGCAATGCTATATTACACCAATTATCAGGCTaGAATAGCATGATGGAGTCCCTATATTATACAAGA +
Preference number: 6 (lower is better)
Translates to: TFSNAILHQLSG*NSMMESLYYTR
Trigger: TCTTGTATAATATAGGGACTCCATCATGCTATTCAAGCCTGATAATTGGTGTAATATAGCATTGCTGAAAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519130.5