RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RANBP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000141084

Ensembl transcript IDs: ENST00000317506.8, ENST00000448631.6, ENST00000602506.5, ENST00000602525.5, ENST00000602638.5, ENST00000602677.5, ENST00000602815.5, ENST00000602887.1, ENST00000630626.2

Found 1136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGTTGGGGTTGTGCTCCAGCAGCCCTGGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCACACGGCCCTCCAGCACCAGCTTCT +
Preference number: 1 (lower is better)
Translates to: GGWGCAPAALGRSAG*SRWPRPHGPPAPAS
Trigger: AGAAGCTGGTGCTGGAGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCACAACCCCAACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp GAACCCAGGCCTGCTCGGGCCATGAGCCGGAGACACTCAGATGCCTaGCCCAGGGCGAGCATCAGAGGGGGCTGCTTTGGCAGGTTCTGG +
Preference number: 1 (lower is better)
Translates to: EPRPARAMSRRHSDA*PRASIRGGCFGRFW
Trigger: CCAGAACCTGCCAAAGCAGCCCCCTCTGATGCTCGCCCTGGGCCAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 90 bp CTGCTCCCCAGGGCCGGACAAACCAAGAAAGCCAGGTCTTCCTCCTaGCTCCATGGGTCAGGTCCAGCCCTTCACCAGGGCTCCCCCAGG +
Preference number: 1 (lower is better)
Translates to: LLPRAGQTKKARSSS*LHGSGPALHQGSPR
Trigger: CCTGGGGGAGCCCTGGTGAAGGGCTGGACCTGACCCATGGAGGCAGGAGGAAGACCTGGCTTTCTTGGTTTGTCCGGCCCTGGGGAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp GCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGACACTCAGATaGCTGGCCCAGGGCGAGCATCAGAGGGGGCTGCTTTGGCAGGTT +
Preference number: 1 (lower is better)
Translates to: ARTQACSGHEPETLR*LAQGEHQRGLLWQV
Trigger: AACCTGCCAAAGCAGCCCCCTCTGATGCTCGCCCTGGGCCAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp GCACTTGAGCATGAAGAGGAGGTTGGGGTTGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGTCTCGATGGCCTCGCCCACACGGCC +
Preference number: 1 (lower is better)
Translates to: ALEHEEEVGVVLQQP*VEALGGLDGLAHTA
Trigger: GGCCGTGTGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTTCATGCTCAAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 90 bp AAACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCGTGCCCTGGACCTTGGCACGCCACT +
Preference number: 1 (lower is better)
Translates to: KPCSAALPATRQAGH*WGSSGPCPGPWHAT
Trigger: AGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
3UTR CCA 90 bp CCTGGAAGCAGGCTGGTAGGACTGGATGTGCATAAGGGGCACCTCTaGCTGGCAGGCAGGCAGGCCTGGACTCTCAGCAAGAGAGTGGGC +
Preference number: 1 (lower is better)
Translates to: PGSRLVGLDVHKGHL*LAGRQAWTLSKRVG
Trigger: GCCCACTCTCTTGCTGAGAGTCCAGGCCTGCCTGCCTGCCAGCCAGAGGTGCCCCTTATGCACATCCAGTCCTACCAGCCTGCTTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 90 bp GGCCCAACTGCTCACTCAATGCCTGCAACTCGCGGCCAAACAGAATaGTCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCTGCCGCC +
Preference number: 1 (lower is better)
Translates to: GPTAHSMPATRGQTE*SFLWQPGCPRRAAA
Trigger: GGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 90 bp CATCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATaGGCCGGAGACACTCAGATGCCTGGCCCAGGGCGAGCATCAGAG +
Preference number: 1 (lower is better)
Translates to: HQLWQRSKNPGLLGP*AGDTQMPGPGRASE
Trigger: CTCTGATGCTCGCCCTGGGCCAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 90 bp GAACCAGCCATGCCAGGGCCTGGCCTGCGCCCAGCCTTCAGAATGTaGATTAGGGAGGCTGCCCTGAGACGTCTCCATCCTGCCAACTGT +
Preference number: 1 (lower is better)
Translates to: EPAMPGPGLRPAFRM*IREAALRRLHPANC
Trigger: ACAGTTGGCAGGATGGAGACGTCTCAGGGCAGCCTCCCTAATGCACATTCTGAAGGCTGGGCGCAGGCCAGGCCCTGGCATGGCTGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR CCA 90 bp AGGGCCCAGCTGCAGGGAGCTGTCTGGCACAGTGGCAGTGAAGTCTaGCCTAGGGGACCAAGGATTCCATCCACTCCCTGGAGTAGCAGC +
Preference number: 1 (lower is better)
Translates to: RAQLQGAVWHSGSEV*PRGPRIPSTPWSSS
Trigger: GCTGCTACTCCAGGGAGTGGATGGAATCCTTGGTCCCCTAGGCCAGACTTCACTGCCACTGTGCCAGACAGCTCCCTGCAGCTGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp ACCTCTGGCTGGCAGGCAGGCAGGCCTGGACTCTCAGCAAGAGAGTaGGCTCAAGCAGCTTGGTTTTGGCCCTCTCCACAGCTTGTGGGG +
Preference number: 1 (lower is better)
Translates to: TSGWQAGRPGLSARE*AQAAWFWPSPQLVG
Trigger: CCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGGCCTGCCTGCCTGCCAGCCAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp GCCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTaGTTGCCCCCGCAGAGCTGCCGCCGAGGATGCCTGTCATCCATG +
Preference number: 1 (lower is better)
Translates to: ACNSRPNRMILSVAA*LPPQSCRRGCLSSM
Trigger: CATGGATGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 90 bp CTGGCCTGCGCCCAGCCTTCAGAATGTGCATTAGGGAGGCTGCCCTaGGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATC +
Preference number: 1 (lower is better)
Translates to: LACAQPSECALGRLP*DVSILPTVHLGSAI
Trigger: GATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCTCAGGGCAGCCTCCCTAATGCACATTCTGAAGGCTGGGCGCAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR GCA 90 bp CGGAGACACTCAGATGCCTGGCCCAGGGCGAGCATCAGAGGGGGCTaGTTTGGCAGGTTCTGGGACTCTAAAATGGCGCTGTTGAGGGCA +
Preference number: 1 (lower is better)
Translates to: RRHSDAWPRASIRGG*FGRFWDSKMALLRA
Trigger: TGCCCTCAACAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCAGCCCCCTCTGATGCTCGCCCTGGGCCAGGCATCTGAGTGTCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 90 bp GTGCAAGTAGTCATCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTaGTCGGGCCATGAGCCGGAGACACTCAGATGCCTGGCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: VQVVINSGKGARTQA*SGHEPETLRCLAQG
Trigger: GCCCTGGGCCAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACTTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp GGAAAATGCCTGAGGCAGCCAGAGGCCACAATCTGGCCACAGGTCTaGGTGCATGAGACTGGCAGTCTAGTAGGGCTCCGCTGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: GKCLRQPEATIWPQV*VHETGSLVGLRCLA
Trigger: AGCCAGGCAGCGGAGCCCTACTAGACTGCCAGTCTCATGCACCCAGACCTGTGGCCAGATTGTGGCCTCTGGCTGCCTCAGGCATTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp GCTGCCCTGAGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTaGCATCTTGAAGGTGGGACAGGAACATGGCCTCGAGCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: AALRRLHPANCPSGQ*HLEGGTGTWPRAAS
Trigger: GCTTGCAGCTCGAGGCCATGTTCCTGTCCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCTCAGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR CCA 90 bp CTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTaGCCCTGTAGTTCTCTGCTCTGTCCAGCTCTCAGGGGCCTAGGG +
Preference number: 1 (lower is better)
Translates to: LCCVALGQVITSLDP*PCSSLLCPALRGLG
Trigger: CCCTAGGCCCCTGAGAGCTGGACAGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 90 bp TGGCCCTCTCCACAGCTTGTGGGGCAAAGGCTTATGTCCCAAAGGTaGGCTGCCCAACTGGGACAGAGAGCCCCTCTGGAGAGGAACAGA +
Preference number: 1 (lower is better)
Translates to: WPSPQLVGQRLMSQR*AAQLGQRAPLERNR
Trigger: TCTGTTCCTCTCCAGAGGGGCTCTCTGTCCCAGTTGGGCAGCTCACCTTTGGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 90 bp GGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGGACTCGGAGTAATTaGCGGAGGATGGGGAAGAGGACGAGGAGGAGGAGGAGGACGAGG +
Preference number: 1 (lower is better)
Translates to: GAGTWWSLLSWTRSN*RRMGKRTRRRRRTR
Trigger: CCTCGTCCTCCTCCTCCTCCTCGTCCTCTTCCCCATCCTCCGTCAATTACTCCGAGTCCAACTCAACAGACTCCACCAAGTCCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp CCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTaGACCCTTGGCCCTGTAGTTCTCTGCTCTGTCCAGCTCTCAGGG +
Preference number: 1 (lower is better)
Translates to: PSTSAVWPWAKLSLL*TLGPVVLCSVQLSG
Trigger: CCCTGAGAGCTGGACAGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp GCAGGCAGGCCTGGACTCTCAGCAAGAGAGTGGGCTCAAGCAGCTTaGTTTTGGCCCTCTCCACAGCTTGTGGGGCAAAGGCTTATGTCC +
Preference number: 1 (lower is better)
Translates to: AGRPGLSAREWAQAA*FWPSPQLVGQRLMS
Trigger: GGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGGCCTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 90 bp TCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTaGCACACCCCTGAAGGTAGCAGCTTCTCAGATACTGCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: SQPLHNLSSGTRPHP*HTPEGSSFSDTAGG
Trigger: CCCTCCAGCAGTATCTGAGAAGCTGCTACCTTCAGGGGTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp CCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCCTTGCCATaGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCA +
Preference number: 1 (lower is better)
Translates to: PRFRQGLKVQLPALP*LTLLFAWAACALPS
Trigger: TGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp GAGAGTGGGCTCAAGCAGCTTGGTTTTGGCCCTCTCCACAGCTTGTaGGGCAAAGGCTTATGTCCCAAAGGTGAGCTGCCCAACTGGGAC +
Preference number: 1 (lower is better)
Translates to: ESGLKQLGFGPLHSL*GKGLCPKGELPNWD
Trigger: GTCCCAGTTGGGCAGCTCACCTTTGGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp GGGTCCCAGGTCCAGGTAACACAGCCGCCAGGATGCAAATGCAGGTaGTATAGCTCCAGAATCCATGCTCTGCTCCACCAGCTGACCACA +
Preference number: 1 (lower is better)
Translates to: GSQVQVTQPPGCKCR*YSSRIHALLHQLTT
Trigger: TGTGGTCAGCTGGTGGAGCAGAGCATGGATTCTGGAGCTATACCACCTGCATTTGCATCCTGGCGGCTGTGTTACCTGGACCTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 90 bp GACGGAGGATGGGGAAGAGGACGAGGAGGAGGAGGAGGACGAGGATaGGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTT +
Preference number: 1 (lower is better)
Translates to: DGGWGRGRGGGGGRG*GAGCRVFTVVLFAL
Trigger: AAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCCTCCTCCTCGTCCTCTTCCCCATCCTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 90 bp CCTCCATCTCCATCTCACTGTCGCTGGTCTCCTGGTTACTGGTACTaGTGTGGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGGACTCGG +
Preference number: 1 (lower is better)
Translates to: PPSPSHCRWSPGYWY*CGAGTWWSLLSWTR
Trigger: CCGAGTCCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCGACAGTGAGATGGAGATGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 90 bp GCCAAATTCTTGCCGTACTCCCGGCCCAACTGCTCACTCAATGCCTaGAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: AKFLPYSRPNCSLNA*NSRPNRMILSVAAW
Trigger: CCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 90 bp GTGGGCCAAATTCTTGCCGTACTCCCGGCCCAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: VGQILAVLPAQLLTQ*LQLAAKQNDPFCGS
Trigger: GCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp AAGGAAGGAAGGAAAGGGAGAGGGGGAAAGGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCCCAGTCCCTGCACCAGTTGCCTATG +
Preference number: 1 (lower is better)
Translates to: KEGRKGRGGKARQEE*TLSMVSQSLHQLPM
Trigger: CATAGGCAACTGGTGCAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCCTCTCCCTTTCCTTCCTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR CCA 90 bp AGGCCTGGACTCTCAGCAAGAGAGTGGGCTCAAGCAGCTTGGTTTTaGCCCTCTCCACAGCTTGTGGGGCAAAGGCTTATGTCCCAAAGG +
Preference number: 1 (lower is better)
Translates to: RPGLSAREWAQAAWF*PSPQLVGQRLMSQR
Trigger: CCTTTGGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp CCAATGCAAAGAGGAAAATGCCTGAGGCAGCCAGAGGCCACAATCTaGCCACAGGTCTGGGTGCATGAGACTGGCAGTCTAGTAGGGCTC +
Preference number: 1 (lower is better)
Translates to: PMQRGKCLRQPEATI*PQVWVHETGSLVGL
Trigger: GAGCCCTACTAGACTGCCAGTCTCATGCACCCAGACCTGTGGCCAGATTGTGGCCTCTGGCTGCCTCAGGCATTTTCCTCTTTGCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp ATGGGGAAGAGGACGAGGAGGAGGAGGAGGACGAGGATGAGGAGCTaGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACG +
Preference number: 1 (lower is better)
Translates to: MGKRTRRRRRTRMRS*VQGIYCGSVCSWWT
Trigger: CGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCCTCCTCCTCGTCCTCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp GCTCTGCCTCCATCTCCATCTCACTGTCGCTGGTCTCCTGGTTACTaGTACTGCTGTGGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGG +
Preference number: 1 (lower is better)
Translates to: ALPPSPSHCRWSPGY*YCCGAGTWWSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCGACAGTGAGATGGAGATGGAGGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 90 bp TACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGACTGAGCGGGGTGGTGGGCAGAGAA +
Preference number: 1 (lower is better)
Translates to: YMRVTSQYCVTGRCT*RGERERLSGVVGRE
Trigger: TTCTCTGCCCACCACCCCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR TCA 90 bp CTCAAGGGCCTCTGTCCTGGGAATGGAGTCTTCTTTCCAGCAGCCTaGCACACAGAAGCTCTCAGGACGAAGGCAGGTAGTTTCCAGGCA +
Preference number: 1 (lower is better)
Translates to: LKGLCPGNGVFFPAA*HTEALRTKAGSFQA
Trigger: TGCCTGGAAACTACCTGCCTTCGTCCTGAGAGCTTCTGTGTGTCAGGCTGCTGGAAAGAAGACTCCATTCCCAGGACAGAGGCCCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp CTCTCCACAGCTTGTGGGGCAAAGGCTTATGTCCCAAAGGTGAGCTaGCCAACTGGGACAGAGAGCCCCTCTGGAGAGGAACAGAGTAAA +
Preference number: 1 (lower is better)
Translates to: LSTACGAKAYVPKVS*PTGTESPSGEEQSK
Trigger: TTTACTCTGTTCCTCTCCAGAGGGGCTCTCTGTCCCAGTTGGGCAGCTCACCTTTGGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp ACGAGGATGAGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTaGTCTTGGTGGACGCGACGCCATTGCTACAGCTGGGACTGTCTG +
Preference number: 1 (lower is better)
Translates to: TRMRSWVQGIYCGSV*SWWTRRHCYSWDCL
Trigger: CAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTaGACGCGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTGTGT +
Preference number: 1 (lower is better)
Translates to: RSWVQGIYCGSVCSW*TRRHCYSWDCLLLC
Trigger: ACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp ATGAGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTaGTGGACGCGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTG +
Preference number: 1 (lower is better)
Translates to: MRSWVQGIYCGSVCS*WTRRHCYSWDCLLL
Trigger: CAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 90 bp CAAACATTTTTCTTGTTGCCCAGCTGTGGGCCCAGTGAGGCCTGGTaGGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCAC +
Preference number: 1 (lower is better)
Translates to: QTFFLLPSCGPSEAW*AMGISGHTNHSHVH
Trigger: GTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGGCCTCACTGGGCCCACAGCTGGGCAACAAGAAAAATGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp GGCCACACCAACCATTCCCATGTCCACCAATATGGAGCAGGAGCTTaGAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGC +
Preference number: 1 (lower is better)
Translates to: GHTNHSHVHQYGAGA*KAQIQAGTESSTSG
Trigger: GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATATTGGTGGACATGGGAATGGTTGGTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp AGCATCTCTGTGTGGGCCAAATTCTTGCCGTACTCCCGGCCCAACTaGTCACTCAATGCCTGCAACTCGCGGCCAAACAGAATGATCCTT +
Preference number: 1 (lower is better)
Translates to: SISVWAKFLPYSRPN*SLNACNSRPNRMIL
Trigger: AAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGAGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp TCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTaGGAATGGAGTCTTCTTTCCAGCAGCCTGACACACAGAAGCTCT +
Preference number: 1 (lower is better)
Translates to: SRQEESSPCTQGPLS*EWSLLSSSLTHRSS
Trigger: AGAGCTTCTGTGTGTCAGGCTGCTGGAAAGAAGACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp TTTTCTTGTTGCCCAGCTGTGGGCCCAGTGAGGCCTGGTGAGCAATaGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATATG +
Preference number: 1 (lower is better)
Translates to: FSCCPAVGPVRPGEQ*VSQATPTIPMSTNM
Trigger: CATATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGGCCTCACTGGGCCCACAGCTGGGCAACAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTaGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATG +
Preference number: 1 (lower is better)
Translates to: ASSSLCLLKEWEGAR*PGSPHFCLVVSILM
Trigger: CATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp AACATGGCCTCGAGCTGCAAGCTGGTCATGAGGACCAGAGCTGAATaGACTCCTGACAGGTTAACCAGGGTTGACATGAGCCAGAGAGCA +
Preference number: 1 (lower is better)
Translates to: NMASSCKLVMRTRAE*TPDRLTRVDMSQRA
Trigger: TGCTCTCTGGCTCATGTCAACCCTGGTTAACCTGTCAGGAGTCCATTCAGCTCTGGTCCTCATGACCAGCTTGCAGCTCGAGGCCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR GCA 90 bp TGGCCCCATCACCAGCAGTTGGTCCAATTCAAACATTTTTCTTGTTaGCCAGCTGTGGGCCCAGTGAGGCCTGGTGAGCAATGGGTATCT +
Preference number: 1 (lower is better)
Translates to: WPHHQQLVQFKHFSC*PAVGPVRPGEQWVS
Trigger: AGATACCCATTGCTCACCAGGCCTCACTGGGCCCACAGCTGGGCAACAAGAAAAATGTTTGAATTGGACCAACTGCTGGTGATGGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp GGAACTTTCAGCTCTGACAATTCTCTGCCTCATCTTCTTTGTGCTTaGTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACT +
Preference number: 1 (lower is better)
Translates to: GTFSSDNSLPHLLCA*LRSGKALGGQAVPT
Trigger: AGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGCAGAGAATTGTCAGAGCTGAAAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp GGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCCATTaGTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAAC +
Preference number: 1 (lower is better)
Translates to: GIYCGSVCSWWTRRH*YSWDCLLLCCACGN
Trigger: GTTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 90 bp CCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTACTaGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: PLPGVAAQEPASTRY*FLNRKHPFSQSCAE
Trigger: CTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp GGACCAAGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTaGCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTC +
Preference number: 1 (lower is better)
Translates to: GPRIPSTPWSSSPRT*LHKVLVSQQKASIL
Trigger: GAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCTTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp CCTTTACAGACAGGACGCCTCCTAACAGGCCATGGTCTATGGGTCTaGCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGATCATT +
Preference number: 1 (lower is better)
Translates to: PLQTGRLLTGHGLWV*QPQGPRKSSSYRII
Trigger: AATGATCCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATGGCCTGTTAGGAGGCGTCCTGTCTGTAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp GAATTTCCTTTACAGACAGGACGCCTCCTAACAGGCCATGGTCTATaGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGG +
Preference number: 1 (lower is better)
Translates to: EFPLQTGRLLTGHGL*VCQPQGPRKSSSYR
Trigger: CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATGGCCTGTTAGGAGGCGTCCTGTCTGTAAAGGAAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 90 bp CTGAAGGTAGCAGCTTCTCAGATACTGCTGGAGGGCACATCAGCCTaGCCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGGACTAAAT +
Preference number: 1 (lower is better)
Translates to: LKVAASQILLEGTSA*PLMGFICHSVSGLN
Trigger: ATTTAGTCCTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCAGCAGTATCTGAGAAGCTGCTACCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp ATCATTTCCCAAGGCAGAATTCTGACAGCACAGGGCCCAGGGCCCTaGCCCCATCACCAGCAGTTGGTCCAATTCAAACATTTTTCTTGT +
Preference number: 1 (lower is better)
Translates to: IISQGRILTAQGPGP*PHHQQLVQFKHFSC
Trigger: ACAAGAAAAATGTTTGAATTGGACCAACTGCTGGTGATGGGGCCAGGGCCCTGGGCCCTGTGCTGTCAGAATTCTGCCTTGGGAAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 90 bp GCTAATGCCAAGTATCAACTCTTGAGGACAAAGGCAAAACCAGTGTaGACAATGTGGAGGATGTCTGTTGCAGCTGTAGTTACTAATGCA +
Preference number: 1 (lower is better)
Translates to: ANAKYQLLRTKAKPV*TMWRMSVAAVVTNA
Trigger: TGCATTAGTAACTACAGCTGCAACAGACATCCTCCACATTGTGCACACTGGTTTTGCCTTTGTCCTCAAGAGTTGATACTTGGCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 90 bp AAGTATCAACTCTTGAGGACAAAGGCAAAACCAGTGTGCACAATGTaGAGGATGTCTGTTGCAGCTGTAGTTACTAATGCAGGAAAACCC +
Preference number: 1 (lower is better)
Translates to: KYQLLRTKAKPVCTM*RMSVAAVVTNAGKP
Trigger: GGGTTTTCCTGCATTAGTAACTACAGCTGCAACAGACATCCTCCACATTGTGCACACTGGTTTTGCCTTTGTCCTCAAGAGTTGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCCAGGTGTCTGCAGGCCTACGGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAACAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PRCLQAYGGVEVGREVCEQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...TTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: YLCCVALGQVITSLDPWPQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PANTVLQAAAREGERERDQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR CCA 90 bp AATGATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCTGCCGCCGAGGATGGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCA +
Preference number: 2 (lower is better)
Translates to: NDPFCGSLVAPAELPPRMGRSAG*SRWPRP
Trigger: TGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACC...CATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR TCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTCCCAGTGAGGCCTGGTaGGCAATGGGTATCTCAGGC +
Preference number: 2 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCPSEAW*AMGISG
Trigger: GCCTGAGATACCCATTGCTCACCAGGCCTCACTGGG...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATAGGACCCTCTACCTCTaGTGTGTGGCCCTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHRTLYL*CVALGQ
Trigger: TTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCT...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: LAAKQNDPFCGSLVAPAEVLQQP*VEALGG
Trigger: ACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCAC...CTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 90 bp TGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGTaGCCCCCGCAGAGCTGCCGCCGAGGATGCCTGTCATCCATGCTG +
Preference number: 2 (lower is better)
Translates to: CNSRPNRMILSVAAW*PPQSCRRGCLSSML
Trigger: CAGCATGGATGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCAGGACCCTCTACCTCTaGTGTGTGGCCCTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVRTLYL*CVALGQ
Trigger: TTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCT...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTAGACACCCAACCCCATaGAGCACACAGCTGTCCCGA +
Preference number: 2 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCRHPTP*STQLSR
Trigger: TCGGGACAGCTGTGTGCTGCATGGGGTTGGGTGTCT...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CCAGCCATGCCAGGGCCTGGCCTGCGCCCAGCCTTCAGAATGTGCATTAGGGAGGAGACGTCTCCATCCTaGCAACTGTCCATCTGGGCA +
Preference number: 2 (lower is better)
Translates to: PAMPGPGLRPAFRMCIREETSPS*QLSIWA
Trigger: TGCCCAGATGGACAGTTGGCAGGATGGAGACGTCTC...CTCCCTAATGCACATTCTGAAGGCTGGGCGCAGGCCAGGCCCTGGCATGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR-3UTR CCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTCCTCCTAACAGGCCATaGTCTATGGGTCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCPPNRP*SMGLPA
Trigger: GGCTGGCAGACCCATAGACCATGGCCTGTTAGGAGG...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GCGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAACAGTGGACCGTGCCCTaGACCTTGGCACGCCACTCC +
Preference number: 2 (lower is better)
Translates to: ATPLLQLGLSAPVLCMWEQWTVP*TLARHS
Trigger: GGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTG...TTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR TCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTTTGCTCTGGAAGGAGTaGCCATTTGGTGCCGCAAGG +
Preference number: 2 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCLLWKE*PFGAAR
Trigger: CCTTGCGGCACCAAATGGTCACTCCTTCCAGAGCAA...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGACTCTGCTCCACCAGCTaGCCACAGCCCTTGATGTCT +
Preference number: 2 (lower is better)
Translates to: STLAKEQEPRPARAMSRRLCSTS*PQPLMS
Trigger: AGACATCAAGGGCTGTGGTCAGCTGGTGGAGCAGAG...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHSPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCAGACACCCAACCCCATaGAGCACACAGCTGTCCCGA +
Preference number: 2 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVRHPTP*STQLSR
Trigger: TCGGGACAGCTGTGTGCTGCATGGGGTTGGGTGTCT...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCACCCTACTCTTTGCATaGGCGGCTTGTGCACTCCCC +
Preference number: 2 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVTLLFA*AACALP
Trigger: GGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGT...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CGAGGTAAGATGAAACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGGGCCAAGGTGGACAGTaGCTGTCAGCAGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: RGKMKPCSAALPATRQAGGQGGQ*LSAEMG
Trigger: CCCCATCTCTGCTGACAGCCACTGTCCACCTTGGCC...CCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATCTTACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGAGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: STLAKEQEPRPARAMSRRAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 90 bp GGCAGGCAGGCCTGGACTCTCAGCAAGAGAGTGGGCTCAAGCAGCTaGGTTTTGGCCCTCTCCACAGCTTGTGGGGCAAAGGCTTATGTC +
Preference number: 2 (lower is better)
Translates to: GRQAWTLSKRVGSSS*VLALSTACGAKAYV
Trigger: GACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGGCCTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGATCACGTCTCCTGTGGTaGATGTGGGACCATAGGGCT +
Preference number: 2 (lower is better)
Translates to: STLAKEQEPRPARAMSRRSRLLW*MWDHRA
Trigger: AGCCCTATGGTCCCACATTCACCACAGGAGACGTGA...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCAGAAAACATGGTGCCTaGACAGCCTCACCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLRKHGA*TASPKR
Trigger: CCTCTTGGGTGAGGCTGTCCAGGCACCATGTTTTCT...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCTCTACCTCTGCTGTGTaGCCCTGGGCCAAGTTATCA +
Preference number: 2 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLSTSAV*PWAKLS
Trigger: TGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGA...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CAA 90 bp AGCAGGCTGAAGGCATCCTGCAGCATCTCTGTGTGGGCCAAATTCTaGCCGTACTCCCGGCCCAACTGCTCACTCAATGCCTGCAACTCG +
Preference number: 2 (lower is better)
Translates to: SRLKASCSISVWAKF*PYSRPNCSLNACNS
Trigger: CGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGAGATGCTGCAGGATGCCTTCAGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR TCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCTCGTGGTGTCCATTTTaGTGGCCTGCACCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGSWCPF*WPAPSH
Trigger: GTGGCTGGGTGCAGGCCATCAAAATGGACACCACGA...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACTTGGGTTTCCTAGGCTaGAGCTCGGCCTGTGACTCA +
Preference number: 2 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHLGFLG*SSACDS
Trigger: TGAGTCACAGGCCGAGCTGCAGCCTAGGAAACCCAA...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGAGATGAAACCATGTTCTaGAGCACTGCCTGCCACTCG +
Preference number: 2 (lower is better)
Translates to: STLAKEQEPRPARAMSRRDETMF*STACHS
Trigger: CGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATC...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR CCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: VLSTGGPPQVLATISVFPARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: YLCCVALGQVITSLDPWPARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACCATGCCCACTAAGTaGCCCACCAAACCCTATTTG +
Preference number: 2 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLTMPTK*PTKPYL
Trigger: CAAATAGGGTTTGGTGGGCCACTTAGTGGGCATGGT...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCCAAGGGCCTCTGTCCTaGGAATGGAGTCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: KMGRWPWVPSASQADTQPQGPLS*EWSLLS
Trigger: GGAAAGAAGACTCCATTCCCAGGACAGAGGCCCTTG...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAGGCCACCCCAAGTCCTaGCAACCATCTCAGTCTTTC +
Preference number: 2 (lower is better)
Translates to: GSPHFCLVVSILMACTQPGHPKS*QPSQSF
Trigger: GAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCC...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACACCCTACTCTTTGCATaGGCGGCTTGTGCACTCCCC +
Preference number: 2 (lower is better)
Translates to: PANTVLQAAAREGERERDTLLFA*AACALP
Trigger: GGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCTTCCTCCTGCCTCCATaGGTCAGGTCCAGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGFLLPP*VRSSPS
Trigger: TGAAGGGCTGGACCTGACCCATGGAGGCAGGAGGAA...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCTGCAGCATCTCTGTGTGGGCCAAATTCTTGCCGTACTCCCGGCCCAACTGCTCGCCATTGCTACAGCTaGGACTGTCTGCTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: PAASLCGPNSCRTPGPTARHCYS*DCLLLC
Trigger: ACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCG...AGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGAGATGCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp CTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGTGTGGTGCTGGGACTTaGTGGAGTCTGTTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LAAKQNDPFCGSLVAPAECGAGT*WSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACA...CTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 90 bp GCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCCTaGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTC +
Preference number: 2 (lower is better)
Translates to: AKPRFRQGLKVQLPA*PWLTLLFAWAACAL
Trigger: GAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CAA 90 bp CAAGAGAGTGGGCTCAAGCAGCTTGGTTTTGGCCCTCTCCACAGCTaGTGGGGCAAAGGCTTATGTCCCAAAGGTGAGCTGCCCAACTGG +
Preference number: 2 (lower is better)
Translates to: QESGLKQLGFGPLHS*WGKGLCPKGELPNW
Trigger: CCAGTTGGGCAGCTCACCTTTGGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CAA 90 bp CAGGCCTGGACTCTCAGCAAGAGAGTGGGCTCAAGCAGCTTGGTTTaGGCCCTCTCCACAGCTTGTGGGGCAAAGGCTTATGTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: QAWTLSKRVGSSSLV*ALSTACGAKAYVPK
Trigger: CTTTGGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGTGRCT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR TCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCAGGAGTGGATTCAATaGCACTTAGTCCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: EVDTAADHVSCGECGTIGQEWIQ*HLVLGA
Trigger: GGCCCCCAGGACTAAGTGTCATTGAATCCACTCCTG...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR TCA 90 bp AGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATCTTGAAGGTGGGGCTGCAAGCTGGTCATaGGGACCAGAGCTGAATGGA +
Preference number: 2 (lower is better)
Translates to: RRLHPANCPSGQCHLEGGAASWS*GPELNG
Trigger: TCCATTCAGCTCTGGTCCTCATGACCAGCTTGCAGC...CCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: KALHESNQPILCYRPLHVSPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR GCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAGGCCCTGTAGTTCTCTaGTCTGTCCAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVGPVVL*SVQLSG
Trigger: CCCTGAGAGCTGGACAGAGCAGAGAACTACAGGGCC...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACAGCAGCCCAAGAACCTaGCTCCACAAGGTACTGGTT +
Preference number: 2 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHSSPRT*LHKVLV
Trigger: AACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCT...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CGAGGTAAGATGAAACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCCGCCAGGATGCAAATaGAGGTGGTATAGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: RGKMKPCSAALPATRQAGPPGCK*RWYSSR
Trigger: TCTGGAGCTATACCACCTGCATTTGCATCCTGGCGG...CCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATCTTACCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCAGAAAACATGGTGCCTaGACAGCCTCACCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: YLCCVALGQVITSLDPWPRKHGA*TASPKR
Trigger: CCTCTTGGGTGAGGCTGTCCAGGCACCATGTTTTCT...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCATCTACCTCTGCTGTGTaGCCCTGGGCCAAGTTATCA +
Preference number: 2 (lower is better)
Translates to: GSPHFCLVVSILMACTQPSTSAV*PWAKLS
Trigger: TGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGA...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTCAAGGGCCTCTGTCCTaGGAATGGAGTCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: VLSTGGPPQVLATISVFPQGPLS*EWSLLS
Trigger: GGAAAGAAGACTCCATTCCCAGGACAGAGGCCCTTG...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCCTGCAGGGAGCTGTCTaGCACAGTGGCAGTGAAGTC +
Preference number: 2 (lower is better)
Translates to: AGACKAQIQAGTESSTSGLQGAV*HSGSEV
Trigger: GACTTCACTGCCACTGTGCCAGACAGCTCCCTGCAG...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGACAGGCCATGGTCTATaGGTCTGCCAGCCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQTGHGL*VCQPQG
Trigger: TCCTTGGGGCTGGCAGACCCATAGACCATGGCCTGT...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTCCAACTTCTGGGTTTaGGAGCTAGGTAGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: PANTVLQAAAREGERERDSNFWV*ELGSPR
Trigger: CCTGGGGCTACCTAGCTCCCAAACCCAGAAGTTGGA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAACATAAGGGGCACCTCTaGCTGGCAGGCAGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQHKGHL*LAGRQA
Trigger: GGCCTGCCTGCCTGCCAGCCAGAGGTGCCCCTTATG...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp ATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGGTGGCTGTCAGCAGAGATaGGGAACACACGAGGATCCG +
Preference number: 2 (lower is better)
Translates to: MSNRKGCCPKLASTISPGGCQQR*GTHEDP
Trigger: CGGATCCTCGTGTGTTCCCCATCTCTGCTGACAGCC...ACCTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp GATGAGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACTCTGCAGGCCTACGGTaGGGTAGAGGTTGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: DEELGAGYLLWFCLLLVDSAGLR*GRGWPG
Trigger: TCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGA...GTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTTCCTAGCACACCGTTaGGGTAGTGCTCTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: PANTVLQAAAREGERERDFLAHR*GSALPP
Trigger: TGGAGGCAGAGCACTACCCCAACGGTGTGCTAGGAA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 90 bp GATGAGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTaGGTGGACGCGACGCCATTGCTACAGCTGGGACTGTCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: DEELGAGYLLWFCLL*VDATPLLQLGLSAP
Trigger: AGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 90 bp GACGAGGATGAGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTaGCTCTTGGTGGACGCGACGCCATTGCTACAGCTGGGACTGTCT +
Preference number: 2 (lower is better)
Translates to: DEDEELGAGYLLWFC*LLVDATPLLQLGLS
Trigger: AGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAGCCTCACCCAAGAGGTaGTGGACCACTAATGCTACG +
Preference number: 2 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVASPKR*WTTNAT
Trigger: CGTAGCATTAGTGGTCCAGCACCTCTTGGGTGAGGC...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCTCAAAGAAAACATGGTaGCTGGACAGCCTCACCCAA +
Preference number: 2 (lower is better)
Translates to: KMGRWPWVPSASQADTQPSKKTW*LDSLTQ
Trigger: TTGGGTGAGGCTGTCCAGGCACCATGTTTTCTTTGA...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCATATGGAGCAGGAGCTTaGAAAGCCCAGATTCAGGCA +
Preference number: 2 (lower is better)
Translates to: GSPHFCLVVSILMACTQPYGAGA*KAQIQA
Trigger: TGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCACTTCTCTGGACCCTTaGCCCTGTAGTTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGTSLDP*PCSSLL
Trigger: GAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGT...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCGCCTCCACAAGGTACTaGTTTCTCAACAGAAAGCAT +
Preference number: 2 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLASTRY*FLNRKH
Trigger: ATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGC...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATGCCTCCACAAGGTACTaGTTTCTCAACAGAAAGCAT +
Preference number: 2 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHASTRY*FLNRKH
Trigger: ATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGC...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGGCTGTGGCCATTCTTaGTGTAGAAGCAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: PANTVLQAAAREGERERDGCGHS*CRSRCH
Trigger: ATGGCACCTGCTTCTACACCAAGAATGGCCACAGCC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp ACTCAATGCCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGAGCTGTCCTGGGACTTaGGGCTTCGGGAGCTCAAAC +
Preference number: 2 (lower is better)
Translates to: TQCLQLAAKQNDPFCGSLSCPGT*GFGSSN
Trigger: GTTTGAGCTCCCGAAGCCCCAAGTCCCAGGACAGCT...CAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR TCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: GGTCVKLIESHSLASKYSTGRCT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGT...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTATTCTTTCCAGCAGCCTaGCACACAGAAGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVFFPAA*HTEALR
Trigger: CCTGAGAGCTTCTGTGTGTCAGGCTGCTGGAAAGAA...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GGTCVKLIESHSLASKYSSPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATGCCTCACCCAAGAGGTaGTGGACCACTAATGCTACG +
Preference number: 2 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNASPKR*WTTNAT
Trigger: CGTAGCATTAGTGGTCCAGCACCTCTTGGGTGAGGC...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGCTGACCCTACTCTTTaGATGGGCGGCTTGTGCACT +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGADPTL*MGGLCT
Trigger: AGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp ACTCAATGCCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGTCAAACAGGAAGGGCTaGTGCCCAAAGTTGGCGTCC +
Preference number: 2 (lower is better)
Translates to: TQCLQLAAKQNDPFCGSLSNRKG*CPKLAS
Trigger: GGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGA...CAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp CAAGTAGTCATCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGTTGGGGTAGTGCTCTaGCTCCATCTCCATCTCACT +
Preference number: 2 (lower is better)
Translates to: QVVINSGKGARTQACSGHVGVVL*LHLHLT
Trigger: AGTGAGATGGAGATGGAGGCAGAGCACTACCCCAAC...ATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp GAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 2 (lower is better)
Translates to: EAGAIDEVDTAADHVSCGSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...ACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGTCTGCTGTGTGGCCCTaGGCCAAGTTATCACTTCTC +
Preference number: 2 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQSAVWP*AKLSLL
Trigger: GAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGA...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTCCAACTTCTGGGTTTaGGAGCTAGGTAGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSNFWV*ELGSPR
Trigger: CCTGGGGCTACCTAGCTCCCAAACCCAGAAGTTGGA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp AGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATCTTGAAGGTGGGAGGACCAGAGCTGAATaGACTCCTGACAGGTTAACC +
Preference number: 2 (lower is better)
Translates to: RRLHPANCPSGQCHLEGGRTRAE*TPDRLT
Trigger: GGTTAACCTGTCAGGAGTCCATTCAGCTCTGGTCCT...CCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR CAA 90 bp GGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCCATaGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GYLLWFCLLLVDATP*LQLGLSAPVLCMWE
Trigger: TTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR TCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATGATTCAGGCAGGGACTaGAAGTTCAACTTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNDSGRD*KFNFRP
Trigger: AGGCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATC...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGCTGACCACAGCCCTTaGTGTCTATTTCCCCATATG +
Preference number: 2 (lower is better)
Translates to: ESNQPILCYRPLHVKGREADHSP*CLFPHM
Trigger: CATATGGGGAAATAGACATCAAGGGCTGTGGTCAGC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAAGGCCCTGTAGTTCTCTaGTCTGTCCAGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQGPVVL*SVQLSG
Trigger: CCCTGAGAGCTGGACAGAGCAGAGAACTACAGGGCC...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGACACAGCCGCCAGGATaGAAATGCAGGTGGTATAGC +
Preference number: 2 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWTQPPG*KCRWYS
Trigger: GCTATACCACCTGCATTTGCATCCTGGCGGCTGTGT...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGCAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAA +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGQLLTQ*LQLAAK
Trigger: TTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTG...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 2 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGTGGCAGTGAAGTCTaGCCTAGGGGACCAAGGATT +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSGSEV*PRGPRI
Trigger: AATCCTTGGTCCCCTAGGCCAGACTTCACTGCCACT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGACTTCCGGCCTTGCCATaGCTGACCCTACTCTTTGCA +
Preference number: 2 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRLPALP*LTLLFA
Trigger: TGCAAAGAGTAGGGTCAGCCATGGCAAGGCCGGAAG...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAAGCAGCCCAAGAACCTaGCTCCACAAGGTACTGGTT +
Preference number: 2 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRSSPRT*LHKVLV
Trigger: AACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCT...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTTCACCCAAGAGGTGCTaGACCACTAATGCTACGATA +
Preference number: 2 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSSPKRC*TTNATI
Trigger: TATCGTAGCATTAGTGGTCCAGCACCTCTTGGGTGA...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAAGTGGCAGTGAAGTCTaGCCTAGGGGACCAAGGATT +
Preference number: 2 (lower is better)
Translates to: AWAACALPSQCEAHMEIPSGSEV*PRGPRI
Trigger: AATCCTTGGTCCCCTAGGCCAGACTTCACTGCCACT...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCCCCATCACCAGCAGTTaGTCCAATTCAAACATTTTT +
Preference number: 2 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVPITSS*SNSNIF
Trigger: AAAAATGTTTGAATTGGACCAACTGCTGGTGATGGG...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp AATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCTGTGGCACAATACCCATGCTGTCAGCTGTAACATaGGTCCCAGGTCCAGGTAAC +
Preference number: 2 (lower is better)
Translates to: NRGFSHSSKSRGCGTIPMLSAVT*VPGPGN
Trigger: GTTACCTGGACCTGGGACCCATGTTACAGCTGACAG...CATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAATGACTGAAACCCCGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGTGGTTTCCCAGTCCCTaGACCAGTTGCCTATGGAGG +
Preference number: 2 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQWFPSP*TSCLWR
Trigger: CCTCCATAGGCAACTGGTGCAGGGACTGGGAAACCA...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTCAAAGAAAACATGGTaGCTGGACAGCCTCACCCAA +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSKKTW*LDSLTQ
Trigger: TTGGGTGAGGCTGTCCAGGCACCATGTTTTCTTTGA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CATGGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGTCACCCAAGAGGTGCTaGACCACTAATGCTACGATA +
Preference number: 2 (lower is better)
Translates to: HGLWVCQPQGPRKSSSYRSPKRC*TTNATI
Trigger: TATCGTAGCATTAGTGGTCCAGCACCTCTTGGGTGA...CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: PTWIGFITKLAETSSAQTTGRCT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGT...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
3UTR-3UTR TCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACAATCCTGCTAGGCTATaGTCATTTAAACAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: PANTVLQAAAREGERERDNPARL*SFKQPD
Trigger: ATCAGGCTGTTTAAATGATCATAGCCTAGCAGGATT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGTCTATTTCCCCATATaGCCAAATGTGAGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: KALHESNQPILCYRPLHVVYFPI*PNVSQE
Trigger: CTCCTGACTCACATTTGGTCATATGGGGAAATAGAC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR GCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAATTCTCTCAGAGCTGTaGAGAGATGGTGAAGATCTA +
Preference number: 2 (lower is better)
Translates to: LTLLFAWAACALPSQCEAILSEL*RDGEDL
Trigger: TAGATCTTCACCATCTCTGCACAGCTCTGAGAGAAT...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR GCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCGCTCTGCTACTAATTTaGTATGTGACTTTAGCCAAG +
Preference number: 2 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGALLLI*YVTLAK
Trigger: CTTGGCTAAAGTCACATAGCAAATTAGTAGCAGAGC...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTACCATGCCCACTAAGTaGCCCACCAAACCCTATTTG +
Preference number: 2 (lower is better)
Translates to: YGAGACKAQIQAGTESSTTMPTK*PTKPYL
Trigger: CAAATAGGGTTTGGTGGGCCACTTAGTGGGCATGGT...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAATGTGAAGCACATATaGAAATTCCAGCCGTCCTGG +
Preference number: 2 (lower is better)
Translates to: LHESNQPILCYRPLHVKGNVKHI*KFQPSW
Trigger: CCAGGACGGCTGGAATTTCCATATGTGCTTCACATT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAACCATGTCCACCAATATaGAGCAGGAGCTTGCAAAGC +
Preference number: 2 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQPCPPI*SRSLQS
Trigger: GCTTTGCAAGCTCCTGCTCCATATTGGTGGACATGG...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCCATATGACCAAATGTaGGTCAGGAGTGGATTCAAT +
Preference number: 2 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWPYDQM*VRSGFN
Trigger: ATTGAATCCACTCCTGACTCACATTTGGTCATATGG...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGGGGATCTACAGTTCTTaGGATGCTATAAACCAATGT +
Preference number: 2 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQGIYSS*DAINQC
Trigger: ACATTGGTTTATAGCATCCCAAGAACTGTAGATCCC...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGATCCAGCACCAGCTTCTaGATCTTTTGTCTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: RSWVQGIYCGSVCSWWTRSSTSF*IFCLFF
Trigger: AAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGGA...TCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: SPTWIGFITKLAETSSAQARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
3UTR-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR CAA 90 bp TCCTCCCACACCCACAAGTTTCATGCTAATGCCAAGTATCAACTCTaGAGGACAAAGGCAAAACCAGTGTGCACAATGTGGAGGATGTCT +
Preference number: 2 (lower is better)
Translates to: SSHTHKFHANAKYQL*RTKAKPVCTMWRMS
Trigger: AGACATCCTCCACATTGTGCACACTGGTTTTGCCTTTGTCCTCAAGAGTTGATACTTGGCATTAGCATGAAACTTGTGGGTGTGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR TCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAAATAAATCACTTGGCTaGGGTGACAGAGATTCTTCT +
Preference number: 2 (lower is better)
Translates to: AWAACALPSQCEAHMEIPNKSLG*GDRDSS
Trigger: AGAAGAATCTCTGTCACCTCAGCCAAGTGATTTATT...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 2 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR CCA 90 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGAAAGCTATCACCAACTTaGATAGGCTTCATCACTAAA +
Preference number: 2 (lower is better)
Translates to: RSWVQGIYCGSVCSWWTRKLSPT*IGFITK
Trigger: TTTAGTGATGAAGCCTATCCAAGTTGGTGATAGCTT...TCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAAAGCTATCACCAACTTaGATAGGCTTCATCACTAAA +
Preference number: 2 (lower is better)
Translates to: AWAACALPSQCEAHMEIPKLSPT*IGFITK
Trigger: TTTAGTGATGAAGCCTATCCAAGTTGGTGATAGCTT...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGAAAGCTATCACCAACTTaGATAGGCTTCATCACTAAA +
Preference number: 2 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRKLSPT*IGFITK
Trigger: TTTAGTGATGAAGCCTATCCAAGTTGGTGATAGCTT...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp TGCCACTCGCCAAGCCGGGCACTGATGGGGAAGCAGTaGACCGTGCCCTGGACCTTGGCACGCCACTCCCGC +
Preference number: 3 (lower is better)
Translates to: CHSPSRALMGKQ*TVPWTLARHSR
Trigger: GCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCGAGTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
3UTR CCA 72 bp GGTTGTGCTCCAGCAGCCCTGGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCACACGGCCCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: GCAPAALGRSAG*SRWPRPHGPPA
Trigger: TGCTGGAGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCACAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp CCTGCTCGGGCCATGAGCCGGAGACACTCAGATGCCTaGCCCAGGGCGAGCATCAGAGGGGGCTGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: PARAMSRRHSDA*PRASIRGGCFG
Trigger: GCCAAAGCAGCCCCCTCTGATGCTCGCCCTGGGCCAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 72 bp TCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCGTGCCCTGGACCTTGG +
Preference number: 3 (lower is better)
Translates to: SAALPATRQAGH*WGSSGPCPGPW
Trigger: CCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
3UTR GCA 72 bp GGTACCAAGTGCGAGCCAGGCAGACACCCAACCCCATaGAGCACACAGCTGTCCCGAGCCCTCCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: GTKCEPGRHPTP*STQLSRALLGP
Trigger: AGGGCCCAGGAGGGCTCGGGACAGCTGTGTGCTGCATGGGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp CAACCCCATGCAGCACACAGCTGTCCCGAGCCCTCCTaGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: QPHAAHSCPEPS*ALSATPQPKLR
Trigger: CCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGGGCTCGGGACAGCTGTGTGCTGCATGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp CATGAAGAGGAGGTTGGGGTTGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGTCTCGATGGCCTCGCC +
Preference number: 3 (lower is better)
Translates to: HEEEVGVVLQQP*VEALGGLDGLA
Trigger: GGCGAGGCCATCGAGACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp TCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTaGTTGCCCCCGCAGAGCTGCCGCCGAGGATGCCTG +
Preference number: 3 (lower is better)
Translates to: SRPNRMILSVAA*LPPQSCRRGCL
Trigger: CAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CAA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CAA 90 bp GTTCTGTTTGCTCTTGGTGGACGCGACGCCATTGCTACAGCTGGGACTGTCTGCACCGTGCCCTGGACCTaGGCACGCCACTCCCGCATG +
Preference number: 3 (lower is better)
Translates to: VLFALGGRDAIATAGTVCTVPWT*ARHSRM
Trigger: CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGT...GCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp ATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCTaGCGCCGAGGATGCCTGTCATCCATGCTGGACTCA +
Preference number: 3 (lower is better)
Translates to: ILSVAAWLPPQS*RRGCLSSMLDS
Trigger: TGAGTCCAGCATGGATGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp ATGCCAGGGCCTGGCCTGCGCCCAGCCTTCAGAATGTaGATTAGGGAGGCTGCCCTGAGACGTCTCCATCCT +
Preference number: 3 (lower is better)
Translates to: MPGPGLRPAFRM*IREAALRRLHP
Trigger: AGGATGGAGACGTCTCAGGGCAGCCTCCCTAATGCACATTCTGAAGGCTGGGCGCAGGCCAGGCCCTGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR CCA 72 bp CTAAGAGTGGCTAGGGCCCAGCTGCAGGGAGCTGTCTaGCACAGTGGCAGTGAAGTCTGGCCTAGGGGACCA +
Preference number: 3 (lower is better)
Translates to: LRVARAQLQGAV*HSGSEVWPRGP
Trigger: TGGTCCCCTAGGCCAGACTTCACTGCCACTGTGCCAGACAGCTCCCTGCAGCTGGGCCCTAGCCACTCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp AGGCTGGTAGGACTGGATGTGCATAAGGGGCACCTCTaGCTGGCAGGCAGGCAGGCCTGGACTCTCAGCAAG +
Preference number: 3 (lower is better)
Translates to: RLVGLDVHKGHL*LAGRQAWTLSK
Trigger: CTTGCTGAGAGTCCAGGCCTGCCTGCCTGCCAGCCAGAGGTGCCCCTTATGCACATCCAGTCCTACCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 72 bp GTCAAGCTGCTGGCCAACTGGGCAGCTCCAGGGGTCTaGGTATGCCAGCAGGCTGAAGGCATCCTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: VKLLANWAAPGV*VCQQAEGILQH
Trigger: ATGCTGCAGGATGCCTTCAGCCTGCTGGCATACTCAGACCCCTGGAGCTGCCCAGTTGGCCAGCAGCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp TCAGATGCCTGGCCCAGGGCGAGCATCAGAGGGGGCTaGTTTGGCAGGTTCTGGGACTCTAAAATGGCGCTG +
Preference number: 3 (lower is better)
Translates to: SDAWPRASIRGG*FGRFWDSKMAL
Trigger: CAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCAGCCCCCTCTGATGCTCGCCCTGGGCCAGGCATCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp GCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTaGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: AGQGPSTSAVWP*AKLSLLWTLGP
Trigger: AGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp TGGCAGGCAGGCAGGCCTGGACTCTCAGCAAGAGAGTaGGCTCAAGCAGCTTGGTTTTGGCCCTCTCCACAG +
Preference number: 3 (lower is better)
Translates to: WQAGRPGLSARE*AQAAWFWPSPQ
Trigger: CTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGGCCTGCCTGCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CAA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCCCCACCAAACCCTATTaGGGTTTCCTAGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLPTKPY*GFLGCS
Trigger: GCTGCAGCCTAGGAAACCCAAATAGGGTTTGGTGGG...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 72 bp GCCCAGCCTTCAGAATGTGCATTAGGGAGGCTGCCCTaGGACGTCTCCATCCTGCCAACTGTCCATCTGGGC +
Preference number: 3 (lower is better)
Translates to: AQPSECALGRLP*DVSILPTVHLG
Trigger: GCCCAGATGGACAGTTGGCAGGATGGAGACGTCTCAGGGCAGCCTCCCTAATGCACATTCTGAAGGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR GCA 72 bp GTCATCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTaGTCGGGCCATGAGCCGGAGACACTCAGATGCCTG +
Preference number: 3 (lower is better)
Translates to: VINSGKGARTQA*SGHEPETLRCL
Trigger: CAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp GGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACCAGTTGCCTATGGAGG +
Preference number: 3 (lower is better)
Translates to: GERPGRRSGLCL*FPSPCTSCLWR
Trigger: CCTCCATAGGCAACTGGTGCAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR CCA 72 bp CTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTaGGAACTACTGGGGCCATGTCGGGGACTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: LQLGLSAPVLCM*ELLGPCRGLRL
Trigger: CAGCCTCAGTCCCCGACATGGCCCCAGTAGTTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CAA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: ESNQPILCYRPLHVKGREQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR-3UTR CAA 90 bp ATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGGTCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: MSNRKGCCPKLASTISPGQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...ACCTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 72 bp GTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGACTGAGCGGGGTGGTG +
Preference number: 3 (lower is better)
Translates to: VTSQYCVTGRCT*RGERERLSGVV
Trigger: CACCACCCCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR TCA 72 bp TGGGGAAGAGGACGAGGAGGAGGAGGAGGACGAGGATaGGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: WGRGRGGGGGRG*GAGCRVFTVVL
Trigger: CAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCCTCCTCCTCGTCCTCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR TCA 72 bp GCTCACTCAATGCCTGCAACTCGCGGCCAAACAGAATaGTCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGA +
Preference number: 3 (lower is better)
Translates to: AHSMPATRGQTE*SFLWQPGCPRR
Trigger: TCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp GTGTGGGCCAAATTCTTGCCGTACTCCCGGCCCAACTaGTCACTCAATGCCTGCAACTCGCGGCCAAACAGA +
Preference number: 3 (lower is better)
Translates to: VWAKFLPYSRPN*SLNACNSRPNR
Trigger: TCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp GTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTaGCCCTGTAGTTCTCTGCTCTGTCCAGCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: VALGQVITSLDP*PCSSLLCPALR
Trigger: CCTGAGAGCTGGACAGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp CCTGGACTCTCAGCAAGAGAGTGGGCTCAAGCAGCTTaGTTTTGGCCCTCTCCACAGCTTGTGGGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: PGLSAREWAQAA*FWPSPQLVGQR
Trigger: CCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp TCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTaGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTCC +
Preference number: 3 (lower is better)
Translates to: SLCLLKEWEGAR*PGSPHFCLVVS
Trigger: GGACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CAA 90 bp CCTGCAGCATCTCTGTGTGGGCCAAATTCTTGCCGTACTCCCGGCCCAACTGCTACAAACTGCCGGCACTaGAGCATGAAGAGGAGGTTG +
Preference number: 3 (lower is better)
Translates to: PAASLCGPNSCRTPGPTATNCRH*SMKRRL
Trigger: CAACCTCCTCTTCATGCTCAAGTGCCGGCAGTTTGT...AGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGAGATGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp CTGTCGCTGGTCTCCTGGTTACTGGTACTGCTGTGGTaGTGGGACTTGGTGGAGTCTGTTGAGTTGGACTCG +
Preference number: 3 (lower is better)
Translates to: LSLVSWLLVLLW*WDLVESVELDS
Trigger: CGAGTCCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp TCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTaGACCCTTGGCCCTGTAGTTCTCTGCTCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: SAVWPWAKLSLL*TLGPVVLCSVQ
Trigger: CTGGACAGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp AGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATaGAGTCTTCTTTCCAGCAGCCTGACACACAGAAGC +
Preference number: 3 (lower is better)
Translates to: SSPCTQGPLSWE*SLLSSSLTHRS
Trigger: GCTTCTGTGTGTCAGGCTGCTGGAAAGAAGACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp AGGCAGGGACTGAAAGTTCAACTTCCGGCCTTGCCATaGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCA +
Preference number: 3 (lower is better)
Translates to: RQGLKVQLPALP*LTLLFAWAACA
Trigger: TGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCCGGAAGTTGAACTTTCAGTCCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp CTCAAGCAGCTTGGTTTTGGCCCTCTCCACAGCTTGTaGGGCAAAGGCTTATGTCCCAAAGGTGAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: LKQLGFGPLHSL*GKGLCPKGELP
Trigger: GGGCAGCTCACCTTTGGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp CTGGGGGCCAAGGTGGACAGTGGCTGTCAGCAGAGATaGGGAACACACGAGGATCCGGTTTTTGCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LGAKVDSGCQQR*GTHEDPVFAGK
Trigger: TTTTCCTGCAAAAACCGGATCCTCGTGTGTTCCCCATCTCTGCTGACAGCCACTGTCCACCTTGGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp TCAATGACACTTAGTCCTGGGGGCCAAGGTGGACAGTaGCTGTCAGCAGAGATGGGGAACACACGAGGATCC +
Preference number: 3 (lower is better)
Translates to: SMTLSPGGQGGQ*LSAEMGNTRGS
Trigger: GGATCCTCGTGTGTTCCCCATCTCTGCTGACAGCCACTGTCCACCTTGGCCCCCAGGACTAAGTGTCATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp GTTTGCTCTTGGTGGACGCGACGCCATTGCTACAGCTaGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: VCSWWTRRHCYS*DCLLLCCACGN
Trigger: GTTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp CCATCTCCATCTCACTGTCGCTGGTCTCCTGGTTACTaGTACTGCTGTGGTGCTGGGACTTGGTGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: PSPSHCRWSPGY*YCCGAGTWWSL
Trigger: CAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCGACAGTGAGATGGAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp TCTGCCTCCATCTCCATCTCACTGTCGCTGGTCTCCTaGTTACTGGTACTGCTGTGGTGCTGGGACTTGGTG +
Preference number: 3 (lower is better)
Translates to: SASISISLSLVS*LLVLLWCWDLV
Trigger: CACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCGACAGTGAGATGGAGATGGAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CAA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCACAAACATTTTTCTTGTaGCCCAGCTGTGGGCCCAGT +
Preference number: 3 (lower is better)
Translates to: GSPHFCLVVSILMACTQPQTFFL*PSCGPS
Trigger: ACTGGGCCCACAGCTGGGCAACAAGAAAAATGTTTG...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CAA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCCATCACCAGCAGTaGGTCCAATTCAAACATTTT +
Preference number: 3 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHPHHQQ*VQFKHF
Trigger: AAAATGTTTGAATTGGACCAACTGCTGGTGATGGGG...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 72 bp TCCCAGGTCCAGGTAACACAGCCGCCAGGATGCAAATaGAGGTGGTATAGCTCCAGAATCCATGCTCTGCTC +
Preference number: 3 (lower is better)
Translates to: SQVQVTQPPGCK*RWYSSRIHALL
Trigger: GAGCAGAGCATGGATTCTGGAGCTATACCACCTGCATTTGCATCCTGGCGGCTGTGTTACCTGGACCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp TGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCCATTaGTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCA +
Preference number: 3 (lower is better)
Translates to: CGSVCSWWTRRH*YSWDCLLLCCA
Trigger: TGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTaGTCTTGGTGGACGCGACGCCATTGCTACAGCTGG +
Preference number: 3 (lower is better)
Translates to: RSWVQGIYCGSV*SWWTRRHCYSW
Trigger: CCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp CCATCTCACTGTCGCTGGTCTCCTGGTTACTGGTACTaGTGTGGTGCTGGGACTTGGTGGAGTCTGTTGAGT +
Preference number: 3 (lower is better)
Translates to: PSHCRWSPGYWY*CGAGTWWSLLS
Trigger: ACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCGACAGTGAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp TTGCCGTACTCCCGGCCCAACTGCTCACTCAATGCCTaGAACTCGCGGCCAAACAGAATGATCCTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: LPYSRPNCSLNA*NSRPNRMILSV
Trigger: CACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp CTCAGGCCACACCAACCATTCCCATGTCCACCAATATaGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: LRPHQPFPCPPI*SRSLQSPDSGR
Trigger: CCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp TTACAGACAGGACGCCTCCTAACAGGCCATGGTCTATaGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: LQTGRLLTGHGL*VCQPQGPRKSS
Trigger: GCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATGGCCTGTTAGGAGGCGTCCTGTCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp GTCCAGGTAACACAGCCGCCAGGATGCAAATGCAGGTaGTATAGCTCCAGAATCCATGCTCTGCTCCACCAG +
Preference number: 3 (lower is better)
Translates to: VQVTQPPGCKCR*YSSRIHALLHQ
Trigger: CTGGTGGAGCAGAGCATGGATTCTGGAGCTATACCACCTGCATTTGCATCCTGGCGGCTGTGTTACCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp GACGAGGATGAGGAGCTGGGTGCAGGGTATTTACTGTaGTTCTGTTTGCTCTTGGTGGACGCGACGCCATTG +
Preference number: 3 (lower is better)
Translates to: DEDEELGAGYLL*FCLLLVDATPL
Trigger: CAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp AGGACGAGGAGGAGGAGGAGGACGAGGATGAGGAGCTaGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCT +
Preference number: 3 (lower is better)
Translates to: RTRRRRRTRMRS*VQGIYCGSVCS
Trigger: AGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCCTCCTCCTCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp TCACTGTCGCTGGTCTCCTGGTTACTGGTACTGCTGTaGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGGAC +
Preference number: 3 (lower is better)
Translates to: SLSLVSWLLVLL*CWDLVESVELD
Trigger: GTCCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCGACAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR-3UTR CAA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGGTGCCATTGATGAGGTaGACACAGCAGCCGATCACG +
Preference number: 3 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWVPLMR*TQQPIT
Trigger: CGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
3UTR TCA 72 bp GCAGCTTCTCAGATACTGCTGGAGGGCACATCAGCCTaGCCCCTCATGGGGTTTATCTGCCATTCGGTTTCA +
Preference number: 3 (lower is better)
Translates to: AASQILLEGTSA*PLMGFICHSVS
Trigger: TGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCAGCAGTATCTGAGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 72 bp ATTCTTGCCGTACTCCCGGCCCAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAACAGAATGATCCTTTC +
Preference number: 3 (lower is better)
Translates to: ILAVLPAQLLTQ*LQLAAKQNDPF
Trigger: GAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp GTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTaGACGCGACGCCATTGCTACAGCTGGGACTGTCTG +
Preference number: 3 (lower is better)
Translates to: VQGIYCGSVCSW*TRRHCYSWDCL
Trigger: CAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp TGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTaGTGGACGCGACGCCATTGCTACAGCTGGGACTGT +
Preference number: 3 (lower is better)
Translates to: WVQGIYCGSVCS*WTRRHCYSWDC
Trigger: ACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CCA 72 bp TCGAGCTGCAAGCTGGTCATGAGGACCAGAGCTGAATaGACTCCTGACAGGTTAACCAGGGTTGACATGAGC +
Preference number: 3 (lower is better)
Translates to: SSCKLVMRTRAE*TPDRLTRVDMS
Trigger: GCTCATGTCAACCCTGGTTAACCTGTCAGGAGTCCATTCAGCTCTGGTCCTCATGACCAGCTTGCAGCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR GCA 72 bp AGCTCTGACAATTCTCTGCCTCATCTTCTTTGTGCTTaGTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: SSDNSLPHLLCA*LRSGKALGGQA
Trigger: TGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGCAGAGAATTGTCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp ATTTCCTTTACAGACAGGACGCCTCCTAACAGGCCATaGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAA +
Preference number: 3 (lower is better)
Translates to: ISFTDRTPPNRP*SMGLPAPRTKK
Trigger: TTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATGGCCTGTTAGGAGGCGTCCTGTCTGTAAAGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CAA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAATATGGAGCAGGAGCTaGCAAAGCCCAGATTCAGGC +
Preference number: 3 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRIWSRS*QSPDSG
Trigger: GCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATAT...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CAA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGCAAACATTTTTCTTGTaGCCCAGCTGTGGGCCCAGT +
Preference number: 3 (lower is better)
Translates to: LHESNQPILCYRPLHVKGQTFFL*PSCGPS
Trigger: ACTGGGCCCACAGCTGGGCAACAAGAAAAATGTTTG...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: PTWIGFITKLAETSSAQTQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
3UTR TCA 72 bp CCCAAGTCCTGGCAACCATCTCAGTCTTTCCTTTCCTaGTTCCCCAATGGTAGCGGGACCACTTTTACTCTG +
Preference number: 3 (lower is better)
Translates to: PKSWQPSQSFLS*FPNGSGTTFTL
Trigger: CAGAGTAAAAGTGGTCCCGCTACCATTGGGGAATCAGGAAAGGAAAGACTGAGATGGTTGCCAGGACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR TCA 72 bp GGTATAGCTCCAGAATCCATGCTCTGCTCCACCAGCTaGCCACAGCCCTTGATGTCTATTTCCCCATATGAC +
Preference number: 3 (lower is better)
Translates to: GIAPESMLCSTS*PQPLMSISPYD
Trigger: GTCATATGGGGAAATAGACATCAAGGGCTGTGGTCAGCTGGTGGAGCAGAGCATGGATTCTGGAGCTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR GCA 72 bp ATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTaGCTCCACAAGGTACTGGTTTCTCAACAGAAAGCA +
Preference number: 3 (lower is better)
Translates to: IPSTPWSSSPRT*LHKVLVSQQKA
Trigger: TGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp GGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTACTaGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: GVAAQEPASTRY*FLNRKHPFSQS
Trigger: GCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp CCTGGGCCTGTTTCCTTATTTGTAGCAAGAGAGGAATaGGGGAGATGTTCACTGAACCCCATTCCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: PGPVSLFVAREE*GRCSLNPIPAA
Trigger: TGCAGCTGGAATGGGGTTCAGTGAACATCTCCCCCATTCCTCTCTTGCTACAAATAAGGAAACAGGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 72 bp AACCATTCCCATGTCCACCAATATGGAGCAGGAGCTTaGAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCA +
Preference number: 3 (lower is better)
Translates to: NHSHVHQYGAGA*KAQIQAGTESS
Trigger: TGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATATTGGTGGACATGGGAATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CCA 72 bp TCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCTGTaGCACAATACCCATGATGCACGAGGTAAGATGAAA +
Preference number: 3 (lower is better)
Translates to: SGFQSFEQKPWL*HNTHDARGKMK
Trigger: TTTCATCTTACCTCGTGCATCATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAATGACTGAAACCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
3UTR-3UTR CAA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGAGAATAAACCTTACTTaGTCTGTTCTTTATGGACGC +
Preference number: 3 (lower is better)
Translates to: EVDTAADHVSCGECGTIGRINLT*SVLYGR
Trigger: GCGTCCATAAAGAACAGACAAAGTAAGGTTTATTCT...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR-3UTR CAA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCAGGGATCTACAGTTCTaGGGATGCTATAAACCAATG +
Preference number: 3 (lower is better)
Translates to: GGTCVKLIESHSLASKYSRDLQF*GCYKPM
Trigger: CATTGGTTTATAGCATCCCAAGAACTGTAGATCCCT...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 72 bp AGAAAACATGGTGCCTGGACAGCCTCACCCAAGAGGTaGTGGACCACTAATGCTACGATAAATACTGTCTTT +
Preference number: 3 (lower is better)
Translates to: RKHGAWTASPKR*WTTNATINTVF
Trigger: AAAGACAGTATTTATCGTAGCATTAGTGGTCCAGCACCTCTTGGGTGAGGCTGTCCAGGCACCATGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR GCA 72 bp AAGTATCAACTCTTGAGGACAAAGGCAAAACCAGTGTaGACAATGTGGAGGATGTCTGTTGCAGCTGTAGTT +
Preference number: 3 (lower is better)
Translates to: KYQLLRTKAKPV*TMWRMSVAAVV
Trigger: AACTACAGCTGCAACAGACATCCTCCACATTGTGCACACTGGTTTTGCCTTTGTCCTCAAGAGTTGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCGCCGGCTCAGCTCCTaGTCCCCAGGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LAAKQNDPFCGSLVAPAERRLSS*SPGDGS
Trigger: GCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCG...CTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCCGCCGGCTCAGCTCCTaGTCCCCAGGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: KMGRWPWVPSASQADTQPRRLSS*SPGDGS
Trigger: GCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCG...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCCAGGTGTCTGCAGGCCTACGGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGCGGGATACAGGCGCTaGAAGCGCCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRCLQAYGGVEVGREVCEAGYRR*KRRLSS
Trigger: GGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGC...TTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR TCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGGCCATGTCGGGGACTaGGGCTGGGGGAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLGHVGD*GWGSQG
Trigger: ACCCTGGCTCCCCCAGCCTCAGTCCCCGACATGGCC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGACGGGTCTGCCGTCGCTaGCGCCATCTTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPRRVCRR*RHLGGS
Trigger: GCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCG...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGACCCAGCTCCCGGGTCTaGCGTCGCTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPRPSSRV*RRCRHL
Trigger: AAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGG...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp TGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCGCCGGCTCAGCTCCTaGTCCCCAGGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: CGECGTIGLASPRGAERMRRLSS*SPGDGS
Trigger: GCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCG...CATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CCA 90 bp CCAGCCATGCCAGGGCCTGGCCTGCGCCCAGCCTTCAGAATGTGCATTAGGGAGCAGTGGACCGTGCCCTaGACCTTGGCACGCCACTCC +
Preference number: 4 (lower is better)
Translates to: PAMPGPGLRPAFRMCIREQWTVP*TLARHS
Trigger: GGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTG...CTCCCTAATGCACATTCTGAAGGCTGGGCGCAGGCCAGGCCCTGGCATGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAAGCCATGCCAGGGCCTaGCCTGCGCCCAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPRSHARA*PAPSLQ
Trigger: CTGAAGGCTGGGCGCAGGCCAGGCCCTGGCATGGCT...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR TCA 90 bp CTGATGGGGAAGCAGTGGACCGTGCCCTGGACCTTGGCACGCCACTCCCGCATGGAGTCTCTTGCTGGTTaGCCGCGGGATACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LMGKQWTVPWTLARHSRMESLAG*PRDTGA
Trigger: AGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTC...CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR TCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCCGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCG +
Preference number: 4 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVRQAGH*WGSSGP
Trigger: CGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCG...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TCCTGGGACTTGGGGCTTCGGGAGCTCAAACTTCGGACCTCACTGTCCGTCCCACGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCG +
Preference number: 4 (lower is better)
Translates to: SWDLGLRELKLRTSLSVPRQAGH*WGSSGP
Trigger: CGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCG...TGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGTCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCGGGTCTGCCGTCGCTaGCGCCATCTTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLRVCRR*RHLGGS
Trigger: GCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTGATGGGGAACCCAGCTCCCGGGTCTaGCGTCGCTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: NHVLQHCLPLAKPGTDGEPSSRV*RRCRHL
Trigger: AAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGG...TTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTGGAAGCAGTGGACCGTaGCCTGGACCTTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCGSSGP*PGPWHA
Trigger: GGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCC...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGAATGGAACCAGCCATaGCAGGGCCTGGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPREWNQP*QGLACA
Trigger: GGCGCAGGCCAGGCCCTGGCATGGCTGGTTCCATTC...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGACCGTGCCCTGGACCTTaGCACGCCACTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPRPCPGP*HATPAC
Trigger: ACATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGG...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTCAGTGGACCGTGCCCTaGACCTTGGCACGCCACTCC +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCQWTVP*TLARHS
Trigger: GGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTG...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACCGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCG +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHRQAGH*WGSSGP
Trigger: CGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCG...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATGCCGCAAGGGGAAAGTaGGTAGGGAAGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHAARGK*VGKAAP
Trigger: GGGAGCAGCCTTCCCTACTCACTTTCCCCTTGCGGC...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCACCATGGTAGAGGAGTCCCCAGGCTaGGGGTTCCCAGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: IGLASPRGAERMPIITMVEESPG*GFPAPG
Trigger: CCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTC...TACCATGGTGATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602815.5
CDS-3UTR GCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCGAGGAGTCCCCAGGCTaGGGGTTCCCAGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGEESPG*GFPAPG
Trigger: CCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTC...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACGCCGGCTCAGCTCCTaGTCCCCAGGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEARRLSS*SPGDGS
Trigger: GCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCG...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGTGCCATCTTGAAGGTGGGACAGGAACATGGCCTCGAGCTGCAAGCTGGTCATCGCCGGCTCAGCTCCTaGTCCCCAGGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: SAILKVGQEHGLELQAGHRRLSS*SPGDGS
Trigger: GCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCG...ATGACCAGCTTGCAGCTCGAGGCCATGTTCCTGTCCCACCTTCAAGATGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR GCA 90 bp AGGTGTCTGCAGGCCTACGGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCGGCAGCGGAGTCTCTTaGTGGTTGACCGCGGGATAC +
Preference number: 4 (lower is better)
Translates to: RCLQAYGGVEVGREVCEGGSGVS*WLTAGY
Trigger: GTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCC...GCCTTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATTTCTGCAGCACTGCCTaGCACTCGCCAAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHFCSTA*HSPSRA
Trigger: TGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAA...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCTTGCCCCCGCAGAGCTaGCGCCGAGGATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KMGRWPWVPSASQADTQPLPPQS*RRGCLS
Trigger: TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAA...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGCAGCAGGTATGGGGTaGGTGGCACGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLAAGMG*VARTEA
Trigger: GGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAAGCAGCAGGTATGGGGTaGGTGGCACGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAEAAGMG*VARTEA
Trigger: GGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGC...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACCGTGCCCTGGACCTTaGCACGCCACTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAEPCPGP*HATPAC
Trigger: ACATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGG...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLVLQQP*VEALGG
Trigger: ACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCAC...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAACCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRHCYSWDCLLLCCACGNQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...GTTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATTGGGAAGGCGCTAGGTaGCCAGGCAGTCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHWEGAR*PGSPHF
Trigger: GAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCA...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCGGAGGAGGACGAGGATaGGGAGCTGGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CGTIGLASPRGAERMPIIGGGRG*GAGCRV
Trigger: TACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCC...GATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp CTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCTGCCGCCGAGGATGCCTGTCACAGGAGTGGATTCAATaGCACTTAGTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSVAAWLPPQSCRRGCLSQEWIQ*HLVLGA
Trigger: GGCCCCCAGGACTAAGTGTCATTGAATCCACTCCTG...TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCGGGTCTGCCGTCGCTaGCGCCATCTTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERRVCRR*RHLGGS
Trigger: GCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCCCAGCTCCCGGGTCTaGCGTCGCTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDPSSRV*RRCRHL
Trigger: AAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGAGGAGTCCCCAGGCTaGGGGTTCCCAGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREEESPG*GFPAPG
Trigger: CCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGTGTAGAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCGAGGAGTCCCCAGGCTaGGGGTTCCCAGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GVEAGAIDEVDTAADHVSEESPG*GFPAPG
Trigger: CCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTC...GGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCGCCGGCTCAGCTCCTaGTCCCCAGGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVRRLSS*SPGDGS
Trigger: GCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGCGCCGGCTCAGCTCCTaGTCCCCAGGGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGRRLSS*SPGDGS
Trigger: GCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCG...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGGCGGGATACAGGCGCTaGAAGCGCCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERAGYRR*KRRLSS
Trigger: GGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGC...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGGCGGGATACAGGCGCTaGAAGCGCCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EVDTAADHVSCGECGTIGAGYRR*KRRLSS
Trigger: GGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGC...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp CTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCTGCCGCCGAGGATGCCTGTCAAACAGGAAGGGCTGCTaGCCAAAGTTGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LSVAAWLPPQSCRRGCLSNRKGC*PKLAST
Trigger: TGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTT...TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGGAAGCAGTGGACCGTaGCCTGGACCTTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPGSSGP*PGPWHA
Trigger: GGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGTTCTGCAGCACTGCCTaGCACTCGCCAAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLFCSTA*HSPSRA
Trigger: TGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAA...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAATTCTGCAGCACTGCCTaGCACTCGCCAAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAEFCSTA*HSPSRA
Trigger: TGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAA...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCCATGTTCTGCAGCACTaGCTGCCACTCGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLHVLQH*LPLAKP
Trigger: CGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATG...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTGTGAGTAGGGAAGGCTaGTCCCCAGGGCCGGACAAA +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCVSREG*SPGPDK
Trigger: TTTGTCCGGCCCTGGGGAGCAGCCTTCCCTACTCAC...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTGCAGCAGGTATGGGGTaGGTGGCACGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLSTGGPPQVLATISVFPAAGMG*VARTEA
Trigger: GGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGC...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACACAGGCAGCAGGTATaGGGTGGGTGGCACGCACTG +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAEHRQQV*GGWHAL
Trigger: CAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTG...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCACAGGCAGCAGGTATaGGGTGGGTGGCACGCACTG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLHRQQV*GGWHAL
Trigger: CAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCCACAGGCAGCAGGTATaGGGTGGGTGGCACGCACTG +
Preference number: 4 (lower is better)
Translates to: KMGRWPWVPSASQADTQPHRQQV*GGWHAL
Trigger: CAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTG...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TCCTGGGACTTGGGGCTTCGGGAGCTCAAACTTCGGACCTCACTGTCCGTCCCATCTGCAGGCCTACGGTaGGGTAGAGGTTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SWDLGLRELKLRTSLSVPSAGLR*GRGWPG
Trigger: TCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGA...TGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGTCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp AACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTGATGGGGAATCTGCAGGCCTACGGTaGGGTAGAGGTTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: NHVLQHCLPLAKPGTDGESAGLR*GRGWPG
Trigger: TCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGA...TTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: KMGRWPWVPSASQADTQPGRSAG*SRWPRP
Trigger: TGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACC...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
3UTR CAA 72 bp CGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGTaGCCCCCGCAGAGCTGCCGCCGAGGATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RPNRMILSVAAW*PPQSCRRGCLS
Trigger: TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCGTGGGTGGCACGCACTaGGGCCGCATCTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: GGVEVGREVCEGYTKAVAVGGTH*GRIFVI
Trigger: AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCAC...GGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR TCA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATGTGGGTGGCACGCACTaGGGCCGCATCTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHVGGTH*GRIFVI
Trigger: AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCAC...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTGATGGGGAAGCAGTGGACCGTGCCCTGGACCTTGGCACGCCACTCCCGCATGGAAGTCTGTTCATGTTaGCGCCTTGAGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LMGKQWTVPWTLARHSRMEVCSC*RLEPRV
Trigger: GACTCTCGGCTCAAGGCGTCAACATGAACAGACTTC...CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGGCCTGCTCGGGCCATaGGCCGGAGACACTCAGATG +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDGLLGP*AGDTQM
Trigger: CATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAACGGCCTGCTCGGGCCATaGGCCGGAGACACTCAGATG +
Preference number: 4 (lower is better)
Translates to: RRHCYSWDCLLLCCACGNGLLGP*AGDTQM
Trigger: CATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCC...GTTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLTGRCT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAACCCGTCCTCATCCCTaGCACACCCCTGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPTRPHP*HTPEGS
Trigger: GCTACCTTCAGGGGTGTGTCAGGGATGAGGACGGGT...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCGGGTCTGCCGTCGCTaGCGCCATCTTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRERVCRR*RHLGGS
Trigger: GCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGGAGGAGTCCCCAGGCTaGGGGTTCCCAGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWEESPG*GFPAPG
Trigger: CCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTC...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp GGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCAGTGGACGCGGAGGTTaGCCTGGGAGAGACCAATGT +
Preference number: 4 (lower is better)
Translates to: GGVEVGREVCEGYTKAVASGRGG*PGRDQC
Trigger: ACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACT...GGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGGGAAGCAGTGGACCGTaGCCTGGACCTTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERGSSGP*PGPWHA
Trigger: GGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCC...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCATGTTCTGCAGCACTaGCTGCCACTCGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLHVLQH*LPLAKP
Trigger: CGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCTGCCGCCGAGGATGCCTGTCAACAGCTGGGACTGTCTaGTCCTGTGTTGTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LSVAAWLPPQSCRRGCLSTAGTV*SCVVHV
Trigger: CACATGCACAACACAGGAGCAGACAGTCCCAGCTGT...TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTTGCCCCCGCAGAGCTaGCGCCGAGGATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDLPPQS*RRGCLS
Trigger: TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCTGGATGGGGTCAAGCTaGTGGCCAACTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ECGTIGLASPRGAERMPIWMGSS*WPTGQL
Trigger: GAGCTGCCCAGTTGGCCAGCAGCTTGACCCCATCCA...GATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCAGCATCAGAGGGGGCTaGTTTGGCAGGTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GGVEVGREVCEGYTKAVASIRGG*FGRFWD
Trigger: GTCCCAGAACCTGCCAAAGCAGCCCCCTCTGATGCT...GGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLSPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAGCTCCGCTGCCTGGCTaGCACATGGGTGCATACCTG +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPAPLPG*HMGAYL
Trigger: CAGGTATGCACCCATGTGGCAGCCAGGCAGCGGAGC...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCACAGGTATGGGGTGGGTaGCACGCACTGAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPQVWGG*HALRPH
Trigger: ATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTG...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCACCATGGTAGCAGCAGGTATGGGGTaGGTGGCACGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: IGLASPRGAERMPIITMVAAGMG*VARTEA
Trigger: GGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGC...TACCATGGTGATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGCAGCAGGTATGGGGTaGGTGGCACGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDAAGMG*VARTEA
Trigger: GGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCCACAGGCAGCAGGTATaGGGTGGGTGGCACGCACTG +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPHRQQV*GGWHAL
Trigger: CAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTG...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTTCTGCAGGCCTACGGTaGGGTAGAGGTTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GVEVGREVCEGYTKAVAISAGLR*GRGWPG
Trigger: TCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGA...AATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCCGTGCCCTGGACCTTaGCACGCCACTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDPCPGP*HATPAC
Trigger: ACATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCAGTGGACCGTGCCCTaGACCTTGGCACGCCACTCC +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDQWTVP*TLARHS
Trigger: GGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAGCTGGGTGGTCTCGATaGCCTCGCCCACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEAAGWSR*PRPHGP
Trigger: AGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGC...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCCAGGTGTCTGCAGGCCTACGGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAATTCCTAGCACACCGTTaGGGTAGTGCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRCLQAYGGVEVGREVCEFLAHR*GSALPP
Trigger: TGGAGGCAGAGCACTACCCCAACGGTGTGCTAGGAA...TTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTACCCTACTCTTTGCATaGGCGGCTTGTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCTLLFA*AACALP
Trigger: GGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGT...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCGCAGGCAGGCAGGCCTaGACTCTCAGCAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVAGRQA*TLSKRV
Trigger: CACTCTCTTGCTGAGAGTCCAGGCCTGCCTGCCTGC...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCCCAGGGGGTGTGGTTaGAGCAGCCTGGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDPRGCG*SSLVGP
Trigger: AGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGACCAGTCTGGGGCAAGTaGGTTCACCTCTGTTGGACC +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPRPVWGK*VHLCWT
Trigger: GGTCCAACAGAGGTGAACCCACTTGCCCCAGACTGG...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCGGCCAAGGTGGACAGTaGCTGTCAGCAGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: CGTIGLASPRGAERMPIIGQGGQ*LSAEMG
Trigger: CCCCATCTCTGCTGACAGCCACTGTCCACCTTGGCC...GATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTTCACGTCTCCTGTGGTaGATGTGGGACCATAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCSRLLW*MWDHRA
Trigger: AGCCCTATGGTCCCACATTCACCACAGGAGACGTGA...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTGGAGGAGGACGAGGATaGGGAGCTGGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: TLYLCCVALGQVITSLDPGGGRG*GAGCRV
Trigger: TACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCC...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCAGTATGCCAGCAGGCTaGAGGCATCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: AADHVSCGECGTIGLASPSMPAG*RHPAAS
Trigger: AGATGCTGCAGGATGCCTTCAGCCTGCTGGCATACT...GGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGGCCTGCTCGGGCCATaGGCCGGAGACACTCAGATG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREGLLGP*AGDTQM
Trigger: CATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCCAGGTGTCTGCAGGCCTACGGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAACAGGTTAACCAGGGTTaGCATGAGCCAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRCLQAYGGVEVGREVCEQVNQG*HEPESR
Trigger: TCTGCTCTCTGGCTCATGTCAACCCTGGTTAACCTG...TTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR TCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGCTGCAAGCTGGTCATaGGGACCAGAGCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPRAASWS*GPELNG
Trigger: TCCATTCAGCTCTGGTCCTCATGACCAGCTTGCAGC...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR GCA 90 bp CATGGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGCCCAGCTCCCGGGTCTaGCGTCGCTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: HGLWVCQPQGPRKSSSYRPSSRV*RRCRHL
Trigger: AAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGG...CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGCCCAGCTCCCGGGTCTaGCGTCGCTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: VPLMRLTQQPITSPVVNVPSSRV*RRCRHL
Trigger: AAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGG...CACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp GTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGCGGGATACAGGCGCTaGAAGCGCCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPLMRLTQQPITSPVVNVAGYRR*KRRLSS
Trigger: GGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGC...CACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGGCAGCGGAGTCTCTTaGTGGTTGACCGCGGGATAC +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPGSGVS*WLTAGY
Trigger: GTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGGGAAGCAGTGGACCGTaGCCTGGACCTTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: QCQTGRAAAQSWRPQSPQGSSGP*PGPWHA
Trigger: GGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCC...CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGAGGCTGAAGGCATCCTaGAGCATCTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLRLKAS*SISVWA
Trigger: GGCCCACACAGAGATGCTGCAGGATGCCTTCAGCCT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPSPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTTGGCTAGGGCCCAGCTaGAGGGAGCTGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSWLGPS*RELSGT
Trigger: TGTGCCAGACAGCTCCCTGCAGCTGGGCCCTAGCCA...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAGCCATGGGTACCAAGTaGGAGCCAGGCAGACACCCA +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPAMGTK*EPGRHP
Trigger: TGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGC...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTGCTCCGCTGCCTGGCTaGCACATGGGTGCATACCTG +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSAPLPG*HMGAYL
Trigger: CAGGTATGCACCCATGTGGCAGCCAGGCAGCGGAGC...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCCATGCCAGGGCCTGGCCTGCGCCCAGCCTTCAGAATGTGCATTAGGGAGTCGCTGCCGCCATCTTaGAGGGAGCTACTATTGTGT +
Preference number: 4 (lower is better)
Translates to: PAMPGPGLRPAFRMCIRESLPPS*RELLLC
Trigger: ACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGA...CTCCCTAATGCACATTCTGAAGGCTGGGCGCAGGCCAGGCCCTGGCATGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCAGGTATGGGGTGGGTaGCACGCACTGAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: EVDTAADHVSCGECGTIGQVWGG*HALRPH
Trigger: ATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTG...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCTGCAGCATCTCTGTGTGGGCCAAATTCTTGCCGTACTCCCGGCCCAACTGCTCTGATGGGGAAGCAGTaGACCGTGCCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PAASLCGPNSCRTPGPTALMGKQ*TVPWTL
Trigger: CAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG...AGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGAGATGCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp ACTCAATGCCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGCTGGGTGGTCTCGATaGCCTCGCCCACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: TQCLQLAAKQNDPFCGSLAGWSR*PRPHGP
Trigger: AGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGC...CAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGCTGGGTGGTCTCGATaGCCTCGCCCACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGAGWSR*PRPHGP
Trigger: AGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: EVDTAADHVSCGECGTIGGRSAG*SRWPRP
Trigger: TGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACC...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCAGCTGTCCTGGGACTTaGGGCTTCGGGAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: CGTIGLASPRGAERMPIISCPGT*GFGSSN
Trigger: GTTTGAGCTCCCGAAGCCCCAAGTCCCAGGACAGCT...GATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCGCCTGTCATCCATGCTaGACTCATCCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLACHPC*THPSAG
Trigger: ACCTGCAGACGGATGAGTCCAGCATGGATGACAGGC...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTAGGCCTGGTGAGCAATaGGTATCTCAGGCCACACCA +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCRPGEQ*VSQATP
Trigger: TGGTGTGGCCTGAGATACCCATTGCTCACCAGGCCT...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTTCCAACTTCTGGGTTTaGGAGCTAGGTAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCSNFWV*ELGSPR
Trigger: CCTGGGGCTACCTAGCTCCCAAACCCAGAAGTTGGA...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCCAGAAAATGGGGAGGTaGCCATGGGTACCAAGTGCG +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLQKMGR*PWVPSA
Trigger: CGCACTTGGTACCCATGGCCACCTCCCCATTTTCTG...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCTGGGAAGGCGCTAGGTaGCCAGGCAGTCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGWEGAR*PGSPHF
Trigger: GAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCA...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGTTGGCCCAGGGGGTGTaGTTGGAGCAGCCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERLAQGV*LEQPGW
Trigger: CCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAA...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGATCTCACTGTCGCTGTaGGGAGGGGTTGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLISLSL*GGVEVG
Trigger: TCCCACCTCAACCCCTCCCCACAGCGACAGTGAGAT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR TCA 90 bp GCGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAAGAGTCTCTTGCTGGTTaGCCGCGGGATACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: ATPLLQLGLSAPVLCMWEESLAG*PRDTGA
Trigger: AGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTC...TTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGAAGTCTGTTCATGTTaGCGCCTTGAGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ADHVSCGECGTIGLASPREVCSC*RLEPRV
Trigger: GACTCTCGGCTCAAGGCGTCAACATGAACAGACTTC...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602815.5
CDS-3UTR TCA 90 bp TCCTGGGACTTGGGGCTTCGGGAGCTCAAACTTCGGACCTCACTGTCCGTCCCATCACGTCTCCTGTGGTaGATGTGGGACCATAGGGCT +
Preference number: 4 (lower is better)
Translates to: SWDLGLRELKLRTSLSVPSRLLW*MWDHRA
Trigger: AGCCCTATGGTCCCACATTCACCACAGGAGACGTGA...TGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp CGAGGTAAGATGAAACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGTGGCCGGGAGGTCTGTaGAGGCTATACCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGKMKPCSAALPATRQAGWPGGL*RLYQGC
Trigger: ACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCA...CCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATCTTACCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR TCA 90 bp GGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTTGGCCGGGAGGTCTGTaGAGGCTATACCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVEVGREVCEGYTKAVAIWPGGL*RLYQGC
Trigger: ACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCA...AATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR TCA 90 bp ACCAGAGCTGAATGGACTCCTGACAGGTTAACCAGGGTTGACATGAGCCAGAGACGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCG +
Preference number: 4 (lower is better)
Translates to: TRAEWTPDRLTRVDMSQRRQAGH*WGSSGP
Trigger: CGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCG...TCTCTGGCTCATGTCAACCCTGGTTAACCTGTCAGGAGTCCATTCAGCTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR TCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTGGCCATGTCGGGGACTaGGGCTGGGGGAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTGHVGD*GWGSQG
Trigger: ACCCTGGCTCCCCCAGCCTCAGTCCCCGACATGGCC...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCACGCGGCCAAACAGAATaGTCCTTTCTGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPRGQTE*SFLWQP
Trigger: AGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCG...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGGCCTGCTCGGGCCATaGGCCGGAGACACTCAGATG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVGLLGP*AGDTQM
Trigger: CATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERTGRCT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGT...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCCCAGTGAGGCCTGGTaGGCAATGGGTATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERPSEAW*AMGISG
Trigger: GCCTGAGATACCCATTGCTCACCAGGCCTCACTGGG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGTTGCTCTGGAAGGAGTaGCCATTTGGTGCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLLLWKE*PFGAAR
Trigger: CCTTGCGGCACCAAATGGTCACTCCTTCCAGAGCAA...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTACCAGCCACAGACCCATaGGGATGGGGATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVPATDP*GWGWGF
Trigger: GAACCCCCATCCCCATCCTCATGGGTCTGTGGCTGG...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGTTAGGGAGGCTGCCCTaGGACGTCTCCATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EVDTAADHVSCGECGTIGLGRLP*DVSILP
Trigger: TGGCAGGATGGAGACGTCTCAGGGCAGCCTCCCTAA...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR GCA 90 bp AATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCTGTGGCACAATACCCATGCGGGTCTGCCGTCGCTaGCGCCATCTTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: NRGFSHSSKSRGCGTIPMRVCRR*RHLGGS
Trigger: GCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCG...CATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAATGACTGAAACCCCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp AGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATCTTGAAGGTGGGGGCAGCGGAGTCTCTTaGTGGTTGACCGCGGGATAC +
Preference number: 4 (lower is better)
Translates to: RRLHPANCPSGQCHLEGGGSGVS*WLTAGY
Trigger: GTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCC...CCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR GCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAAAACAGGAAGGGCTGCTaGCCAAAGTTGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAENRKGC*PKLAST
Trigger: TGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTT...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGTCAAACAGGAAGGGCTaGTGCCCAAAGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLSNRKG*CPKLAS
Trigger: GGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGA...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGGAAGCAGTGGACCGTaGCCTGGACCTTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGGSSGP*PGPWHA
Trigger: GGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGAGGAAGCAGTGGACCGTaGCCTGGACCTTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: RSWVQGIYCGSVCSWWTRGSSGP*PGPWHA
Trigger: GGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCC...TCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGTTCTGCAGCACTGCCTaGCACTCGCCAAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREFCSTA*HSPSRA
Trigger: TGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAA...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGTTCTGCAGCACTGCCTaGCACTCGCCAAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQFCSTA*HSPSRA
Trigger: TGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAA...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGAGCTGCCGCCGAGGATaGCTGTCATCCATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERSCRRG*LSSMLD
Trigger: GTCCAGCATGGATGACAGGCATCCTCGGCGGCAGCT...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTTGCCCCCGCAGAGCTaGCGCCGAGGATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGLPPQS*RRGCLS
Trigger: TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGGATGGGGTCAAGCTaGTGGCCAACTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDWMGSS*WPTGQL
Trigger: GAGCTGCCCAGTTGGCCAGCAGCTTGACCCCATCCA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGTGGATGGGGTCAAGCTaGTGGCCAACTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLWMGSS*WPTGQL
Trigger: GAGCTGCCCAGTTGGCCAGCAGCTTGACCCCATCCA...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCACCATGGTAAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IGLASPRGAERMPIITMVSPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...TACCATGGTGATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACGTCCCAAAGGTGAGCTaGCCAACTGGGACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHVPKVS*PTGTES
Trigger: GCTCTCTGTCCCAGTTGGGCAGCTCACCTTTGGGAC...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGGCCAGGTCTTCCTCCTaGCTCCATGGGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERARSSS*LHGSGP
Trigger: TGGACCTGACCCATGGAGGCAGGAGGAAGACCTGGC...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATCTAGTAGGGCTCCGCTaGCTGGCTGCCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNLVGLR*LAATWV
Trigger: CACCCATGTGGCAGCCAGGCAGCGGAGCCCTACTAG...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCTCGCTGCCGCCATCTTaGAGGGAGCTACTATTGTGT +
Preference number: 4 (lower is better)
Translates to: GGVEVGREVCEGYTKAVASLPPS*RELLLC
Trigger: ACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGA...GGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCAGGTATGGGGTGGGTaGCACGCACTGAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQQVWGG*HALRPH
Trigger: ATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCAGGTATGGGGTGGGTaGCACGCACTGAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: PHVVLNVKQEGLLPKVGVQVWGG*HALRPH
Trigger: ATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTG...GACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGTCTGCAGGCCTACGGTaGGGTAGAGGTTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRESAGLR*GRGWPG
Trigger: TCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGA...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
CDS-3UTR CCA 90 bp GGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GVEVGREVCEGYTKAVAIAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...AATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGCCGTGCCCTGGACCTTaGCACGCCACTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGPCPGP*HATPAC
Trigger: ACATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGG...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCCGTGCCCTGGACCTTaGCACGCCACTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVPCPGP*HATPAC
Trigger: ACATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATCTTGAAGGTGGGCTGATGGGGAAGCAGTaGACCGTGCCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: RRLHPANCPSGQCHLEGGLMGKQ*TVPWTL
Trigger: CAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG...CCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCTGATGGGGAAGCAGTaGACCGTGCCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDLMGKQ*TVPWTL
Trigger: CAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCCGCCATTGCTACAGCTaGGACTGTCTGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVRHCYS*DCLLLC
Trigger: ACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCG...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGGTTCTGTTTGCTCTTaGTGGACGCGACGCCATTGC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLGSVCS*WTRRHC
Trigger: GCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGTGTCTGCAGGCCTACGGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTGCAGCATCTCTGTGTaGGCCAAATTCTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: RCLQAYGGVEVGREVCEGCSISV*AKFLPY
Trigger: GTACGGCAAGAATTTGGCCCACACAGAGATGCTGCA...GCCTTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTCAGCCCTGGGGCCAGTaGAGGGCCAGCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTQPWGQ*RASQSQ
Trigger: CTGGCTCTGGCTGGCCCTCCACTGGCCCCAGGGCTG...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGAGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: STLAKEQEPRPARAMSRRARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAAGTCCTCTCCACAGGTaGGCCACCCCAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEASPLHR*ATPSPG
Trigger: GCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGACT...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAACCCTACTCTTTGCATaGGCGGCTTGTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPTLLFA*AACALP
Trigger: GGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGT...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCACTTCCGGCCTTGCCATaGCTGACCCTACTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPLPALP*LTLLFA
Trigger: TGCAAAGAGTAGGGTCAGCCATGGCAAGGCCGGAAG...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACACAGGCCATGGTCTATaGGTCTGCCAGCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHTGHGL*VCQPQG
Trigger: TCCTTGGGGCTGGCAGACCCATAGACCATGGCCTGT...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCCTCTCCACAGCTTGTaGGGCAAAGGCTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLPLHSL*GKGLCP
Trigger: GGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACCCCACTCTAGGCTCCTaGAAGCAGGCTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHPTLGS*KQAGRT
Trigger: AGTCCTACCAGCCTGCTTCCAGGAGCCTAGAGTGGG...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAGAGTCTCTTGCTGGTTaGCCGCGGGATACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVESLAG*PRDTGA
Trigger: AGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTC...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTTCACGTCTCCTGTGGTaGATGTGGGACCATAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLSTGGPPQVLATISVFPSRLLW*MWDHRA
Trigger: AGCCCTATGGTCCCACATTCACCACAGGAGACGTGA...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCGACGCCTGTTCTTCCTaGATCGGGGTTTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: AADHVSCGECGTIGLASPDACSS*IGVSVI
Trigger: AATGACTGAAACCCCGATTCAGGAAGAACAGGCGTC...GGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR TCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGGGCCATGTCGGGGACTaGGGCTGGGGGAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQGHVGD*GWGSQG
Trigger: ACCCTGGCTCCCCCAGCCTCAGTCCCCGACATGGCC...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGGAGGAGGACGAGGATaGGGAGCTGGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGGGGRG*GAGCRV
Trigger: TACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGGAGGAGGACGAGGATaGGGAGCTGGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVGGGRG*GAGCRV
Trigger: TACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTAGTATGCCAGCAGGCTaGAGGCATCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VLSTGGPPQVLATISVFPSMPAG*RHPAAS
Trigger: AGATGCTGCAGGATGCCTTCAGCCTGCTGGCATACT...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCTAAAATGGCGCTGTTaGGGGCAGCACACACAGGTT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLLKWRC*GQHTQV
Trigger: AACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTGCTGTGCAGAGATGGTaGAGATCTAGGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCAVQRW*RSRQEE
Trigger: TTCTTCCTGCCTAGATCTTCACCATCTCTGCACAGC...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCCAGTCTTTCCTTTCCTaGTTCCCCAATGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVQSFLS*FPNGSG
Trigger: CCCGCTACCATTGGGGAATCAGGAAAGGAAAGACTG...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCGGCCTTGCCATGGCTaGCCCTACTCTTTGCATGGG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRERPCHG*PYSLHG
Trigger: CCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCCG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACCCAGTGAGGCCTGGTaGGCAATGGGTATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEAPSEAW*AMGISG
Trigger: GCCTGAGATACCCATTGCTCACCAGGCCTCACTGGG...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CATGGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGCCAGCCACAGACCCATaGGGATGGGGATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: HGLWVCQPQGPRKSSSYRPATDP*GWGWGF
Trigger: GAACCCCCATCCCCATCCTCATGGGTCTGTGGCTGG...CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACACAGCAGACCCCTGTaGAGTACTGTAGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAEHSRPL*STVDPK
Trigger: CTTGGGATCTACAGTACTTCACAGGGGTCTGCTGTG...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCCCCAGCTCCCGGGTCTaGCGTCGCTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: GGTCVKLIESHSLASKYSPSSRV*RRCRHL
Trigger: AAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGG...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGAGGAGTCCCCAGGCTaGGGGTTCCCAGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKEESPG*GFPAPG
Trigger: CCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTAGTGGACGCGGAGGTTaGCCTGGGAGAGACCAATGT +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSSGRGG*PGRDQC
Trigger: ACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACT...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGAGTGGACGCGGAGGTTaGCCTGGGAGAGACCAATGT +
Preference number: 4 (lower is better)
Translates to: EVDTAADHVSCGECGTIGSGRGG*PGRDQC
Trigger: ACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACT...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR GCA 90 bp TGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGTCAAACAGGAAGGGCTaGTGCCCAAAGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CGECGTIGLASPRGAERMSNRKG*CPKLAS
Trigger: GGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGA...CATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp CCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCATGTTCTGCAGCACTaGCTGCCACTCGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: PHVVLNVKQEGLLPKVGVHVLQH*LPLAKP
Trigger: CGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATG...GACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp CTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGGATGAAACCATGTTCTaGAGCACTGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LAAKQNDPFCGSLVAPAEDETMF*STACHS
Trigger: CGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATC...CTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGACAGCTGGGACTGTCTaGTCCTGTGTTGTGCATGTG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLTAGTV*SCVVHV
Trigger: CACATGCACAACACAGGAGCAGACAGTCCCAGCTGT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGTGGACGCGACGCCATTaGTACAGCTGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERWTRRH*YSWDCL
Trigger: CAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCA...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACCTGGTACTGCTGTGGTaGTGGGACTTGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHLVLLW*WDLVES
Trigger: AGACTCCACCAAGTCCCAGCACCACAGCAGTACCAG...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGTTGGGGTAGTGCTCTaGCTCCATCTCCATCTCACT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLVGVVL*LHLHLT
Trigger: AGTGAGATGGAGATGGAGGCAGAGCACTACCCCAAC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTGATGGGGAAGTTGGGGTAGTGCTCTaGCTCCATCTCCATCTCACT +
Preference number: 4 (lower is better)
Translates to: NHVLQHCLPLAKPGTDGEVGVVL*LHLHLT
Trigger: AGTGAGATGGAGATGGAGGCAGAGCACTACCCCAAC...TTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTAGCTGCCGCCGAGGATaGCTGTCATCCATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EAGAIDEVDTAADHVSCGSCRRG*LSSMLD
Trigger: GTCCAGCATGGATGACAGGCATCCTCGGCGGCAGCT...ACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCAGCTGCCGCCGAGGATaGCTGTCATCCATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGACKAQIQAGTESSTSGSCRRG*LSSMLD
Trigger: GTCCAGCATGGATGACAGGCATCCTCGGCGGCAGCT...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTGATGGGGAATGCTCACTCAATGCCTaGAACTCGCGGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: NHVLQHCLPLAKPGTDGECSLNA*NSRPNR
Trigger: TCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCA...TTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp AACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTGATGGGGAACAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: NHVLQHCLPLAKPGTDGEQLLTQ*LQLAAK
Trigger: TTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTG...TTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLQLLTQ*LQLAAK
Trigger: TTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGAGGCTGAAGGCATCCTaGAGCATCTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLRLKAS*SISVWA
Trigger: GGCCCACACAGAGATGCTGCAGGATGCCTTCAGCCT...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTAGGCTGAAGGCATCCTaGAGCATCTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSRLKAS*SISVWA
Trigger: GGCCCACACAGAGATGCTGCAGGATGCCTTCAGCCT...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATTGGATGGGGTCAAGCTaGTGGCCAACTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNWMGSS*WPTGQL
Trigger: GAGCTGCCCAGTTGGCCAGCAGCTTGACCCCATCCA...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGTCCCTGCACCAGTTaGCTATGGAGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRESPCTS*LWRAGQ
Trigger: CTGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCATGGTTTCCCAGTCCCTaGACCAGTTGCCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPWFPSP*TSCLWR
Trigger: CCTCCATAGGCAACTGGTGCAGGGACTGGGAAACCA...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCAGGACCCTCTACCTCTaGTGTGTGGCCCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: AGACKAQIQAGTESSTSGRTLYL*CVALGQ
Trigger: TTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCT...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTAGGACCCTCTACCTCTaGTGTGTGGCCCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSRTLYL*CVALGQ
Trigger: TTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCT...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGAGCAGCCCAAGAACCTaGCTCCACAAGGTACTGGTT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLSSPRT*LHKVLV
Trigger: AACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAGCTGACCCTACTCTTTaGATGGGCGGCTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPADPTL*MGGLCT
Trigger: AGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGC...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCTATGGAGCAGGAGCTTaGAAAGCCCAGATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLYGAGA*KAQIQA
Trigger: TGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTGCCATGGGTACCAAGTaGGAGCCAGGCAGACACCCA +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSAMGTK*EPGRHP
Trigger: TGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGC...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGTGAGTAGGGAAGGCTaGTCCCCAGGGCCGGACAAA +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNVSREG*SPGPDK
Trigger: TTTGTCCGGCCCTGGGGAGCAGCCTTCCCTACTCAC...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACAGCGGAGTCTCTTGCTaGTTGACCGCGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDSGVSC*LTAGYR
Trigger: CCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GTTCTGTTTGCTCTTGGTGGACGCGACGCCATTGCTACAGCTGGGACTGTCTGCAGCGGAGTCTCTTGCTaGTTGACCGCGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: VLFALGGRDAIATAGTVCSGVSC*LTAGYR
Trigger: CCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCT...GCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTAGCGGAGTCTCTTGCTaGTTGACCGCGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSSGVSC*LTAGYR
Trigger: CCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCT...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGCAGGTATGGGGTGGGTaGCACGCACTGAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGQVWGG*HALRPH
Trigger: ATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTG...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTCTGCAGGCCTACGGTaGGGTAGAGGTTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVSAGLR*GRGWPG
Trigger: TCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
CDS-3UTR CCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCACCATGGTAGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: IGLASPRGAERMPIITMVAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...TACCATGGTGATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602815.5
CDS-3UTR CCA 90 bp AGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATCTTGAAGGTGGGGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRLHPANCPSGQCHLEGGAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...CCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTCTGATGGGGAAGCAGTaGACCGTGCCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSLMGKQ*TVPWTL
Trigger: CAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTGCTGGGTGGTCTCGATaGCCTCGCCCACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTAGWSR*PRPHGP
Trigger: AGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGC...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVGRSAG*SRWPRP
Trigger: TGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGAGCTGTCCTGGGACTTaGGGCTTCGGGAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERSCPGT*GFGSSN
Trigger: GTTTGAGCTCCCGAAGCCCCAAGTCCCAGGACAGCT...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACCTGTGTTGTGCATGTaGGAACTACTGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAEPVLCM*ELLGPC
Trigger: ACATGGCCCCAGTAGTTCCCACATGCACAACACAGG...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACGAGGATGAGGAGCTaGGTGCAGGGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLTRMRS*VQGIYC
Trigger: ACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGT...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCACTGATGGGGAAGTAATTGACGGAGGATaGGGAAGAGGACGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NHVLQHCLPLAKPGTDGEVIDGG*GRGRGG
Trigger: TCCTCCTCGTCCTCTTCCCCATCCTCCGTCAATTAC...TTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGTAATTGACGGAGGATaGGGAAGAGGACGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLVIDGG*GRGRGG
Trigger: TCCTCCTCGTCCTCTTCCCCATCCTCCGTCAATTAC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCGGTGCTGGGACTTGGTaGAGTCTGTTGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: CGTIGLASPRGAERMPIIGAGTW*SLLSWT
Trigger: AGTCCAACTCAACAGACTCCACCAAGTCCCAGCACC...GATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCATGTGGTGCTGGGACTTaGTGGAGTCTGTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPCGAGT*WSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACA...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGTACTGCTGTGGTGCTaGGACTTGGTGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLVLLWC*DLVESV
Trigger: AACAGACTCCACCAAGTCCCAGCACCACAGCAGTAC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAGTACTGCTGTGGTGCTaGGACTTGGTGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPVLLWC*DLVESV
Trigger: AACAGACTCCACCAAGTCCCAGCACCACAGCAGTAC...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCTGTCGCTGGTCTCCTaGTTACTGGTACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGECGTIGLASPRGAERMLSLVS*LLVLLW
Trigger: CCACAGCAGTACCAGTAACCAGGAGACCAGCGACAG...CATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGAGAAAACATGGTGCCTaGACAGCCTCACCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLRKHGA*TASPKR
Trigger: CCTCTTGGGTGAGGCTGTCCAGGCACCATGTTTTCT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAACTTCTCTGGACCCTTaGCCCTGTAGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPTSLDP*PCSSLL
Trigger: GAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGT...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCAGTGGCAGTGAAGTCTaGCCTAGGGGACCAAGGATT +
Preference number: 4 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVSGSEV*PRGPRI
Trigger: AATCCTTGGTCCCCTAGGCCAGACTTCACTGCCACT...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCCAGCCTGACCCCTCATaGGGTTTATCTGCCATTCGG +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPQPDPS*GLSAIR
Trigger: CCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTG...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTCCAGAGGCCACAATCTaGCCACAGGTCTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: TLYLCCVALGQVITSLDPPEATI*PQVWVH
Trigger: ATGCACCCAGACCTGTGGCCAGATTGTGGCCTCTGG...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGTGGTTGGAGCAGCCTaGTTGGGCCTCCTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDVVGAA*LGLLSS
Trigger: GCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCAC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp ATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGGTGGTGGGACAGGAACATaGCCTCGAGCTGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: MSNRKGCCPKLASTISPGGGTGT*PRAASW
Trigger: CCAGCTTGCAGCTCGAGGCCATGTTCCTGTCCCACC...ACCTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp AATGATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGCTGCCGCCGAGGATGTGGGTTCACCTCTGTTaGACCTGGAGCAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: NDPFCGSLVAPAELPPRMWVHLC*TWSKEL
Trigger: GAGTTCTTTGCTCCAGGTCCAACAGAGGTGAACCCA...CATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCTGTCAGCTGTAACATaGGTCCCAGGTCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLLSAVT*VPGPGN
Trigger: GTTACCTGGACCTGGGACCCATGTTACAGCTGACAG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 72 bp GCCTGGACTCTCAGCAAGAGAGTGGGCTCAAGCAGCTaGGTTTTGGCCCTCTCCACAGCTTGTGGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AWTLSKRVGSSS*VLALSTACGAK
Trigger: CTTTGCCCCACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAGTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGAGTCTCTTGCTGGTTaGCCGCGGGATACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGESLAG*PRDTGA
Trigger: AGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGAGTCTCTTGCTGGTTaGCCGCGGGATACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVESLAG*PRDTGA
Trigger: AGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAGTGGGTGGCACGCACTaGGGCCGCATCTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEAVGGTH*GRIFVI
Trigger: AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCAC...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGGTGGGTGGCACGCACTaGGGCCGCATCTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: QCQTGRAAAQSWRPQSPQVGGTH*GRIFVI
Trigger: AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCAC...CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR TCA 90 bp TGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGTTCATGTTGACGCCTTaGGCCGAGAGTCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: CGECGTIGLASPRGAERMFMLTP*AESPIP
Trigger: GGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAA...CATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602815.5
CDS-3UTR TCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACGAAGTCTGTTCATGTTaGCGCCTTGAGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHEVCSC*RLEPRV
Trigger: GACTCTCGGCTCAAGGCGTCAACATGAACAGACTTC...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGTCACGTCTCCTGTGGTaGATGTGGGACCATAGGGCT +
Preference number: 4 (lower is better)
Translates to: EVDTAADHVSCGECGTIGSRLLW*MWDHRA
Trigger: AGCCCTATGGTCCCACATTCACCACAGGAGACGTGA...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR TCA 90 bp GTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTCTTTGGCCGGGAGGTCTGTaGAGGCTATACCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VEVGREVCEGYTKAVAILWPGGL*RLYQGC
Trigger: ACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCA...AAGAATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGTGGCCGGGAGGTCTGTaGAGGCTATACCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREWPGGL*RLYQGC
Trigger: ACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCA...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317506.8
ENST00000602506.5
ENST00000602677.5
CDS-3UTR TCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGACGCCTGTTCTTCCTaGATCGGGGTTTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLDACSS*IGVSVI
Trigger: AATGACTGAAACCCCGATTCAGGAAGAACAGGCGTC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp GTAGAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTACAGGCCGCTGCACGTaGAGGGGAGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VEAGAIDEVDTAADHVSCTGRCT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGT...ACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCGGCCTTGCCATGGCTaGCCCTACTCTTTGCATGGG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVRPCHG*PYSLHG
Trigger: CCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCCG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAGAGGGCACATCAGCCTaGCCCCTCATGGGGTTTATC +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEAEGTSA*PLMGFI
Trigger: GATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTC...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATACCCGTCCTCATCCCTaGCACACCCCTGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNTRPHP*HTPEGS
Trigger: GCTACCTTCAGGGGTGTGTCAGGGATGAGGACGGGT...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCTTATGTCCCAAAGGTaGGCTGCCCAACTGGGACAG +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDLMSQR*AAQLGQ
Trigger: CTGTCCCAGTTGGGCAGCTCACCTTTGGGACATAAG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGTCGTGGTGTCCATTTTaGTGGCCTGCACCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQSWCPF*WPAPSH
Trigger: GTGGCTGGGTGCAGGCCATCAAAATGGACACCACGA...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCACATGGGTGCATACCTaGGTTGTGAGCAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVTWVHT*VVSNQR
Trigger: CCTTTGGTTGCTCACAACTCAGGTATGCACCCATGT...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAAAAGAGGAAAATGCCTaGGGCAGCCAGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPKEENA*GSQRPQ
Trigger: TTGTGGCCTCTGGCTGCCTCAGGCATTTTCCTCTTT...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGCGGGATACAGGCGCTaGAAGCGCCGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKAGYRR*KRRLSS
Trigger: GGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGGCAGCGGAGTCTCTTaGTGGTTGACCGCGGGATAC +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGGSGVS*WLTAGY
Trigger: GTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGAACAGGAAGGGCTGCTaGCCAAAGTTGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERNRKGC*PKLAST
Trigger: TGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTT...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACAACAGGAAGGGCTGCTaGCCAAAGTTGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDNRKGC*PKLAST
Trigger: TGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCTCAAACAGGAAGGGCTaGTGCCCAAAGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGSNRKG*CPKLAS
Trigger: GGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGA...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCATGTTCTGCAGCACTaGCTGCCACTCGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVHVLQH*LPLAKP
Trigger: CGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGACCATCTCCACAAACTaGCGGCACTTGAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLTISTN*RHLSMK
Trigger: CTTCATGCTCAAGTGCCGGCAGTTTGTGGAGATGGT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAACAGCTGGGACTGTCTaGTCCTGTGTTGTGCATGTG +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPTAGTV*SCVVHV
Trigger: CACATGCACAACACAGGAGCAGACAGTCCCAGCTGT...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGTACTGCTGTGGTaGTGGGACTTGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: EVDTAADHVSCGECGTIGLVLLW*WDLVES
Trigger: AGACTCCACCAAGTCCCAGCACCACAGCAGTACCAG...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCATGCTCACTCAATGCCTaGAACTCGCGGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPCSLNA*NSRPNR
Trigger: TCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCA...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGTACTCCCGGCCCAACTaGTCACTCAATGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERYSRPN*SLNACN
Trigger: GTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTA...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTACTCCCGGCCCAACTaGTCACTCAATGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDYSRPN*SLNACN
Trigger: GTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGGCTGAAGGCATCCTaGAGCATCTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRERLKAS*SISVWA
Trigger: GGCCCACACAGAGATGCTGCAGGATGCCTTCAGCCT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCAGGCTGAAGGCATCCTaGAGCATCTCTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRLFFLNRGFSHSSKSRGRLKAS*SISVWA
Trigger: GGCCCACACAGAGATGCTGCAGGATGCCTTCAGCCT...GCCACGGCTTTTGCTCGAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGCATCAGAGGGGGCTaGTTTGGCAGGTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRESIRGG*FGRFWD
Trigger: GTCCCAGAACCTGCCAAAGCAGCCCCCTCTGATGCT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGAGCATCAGAGGGGGCTaGTTTGGCAGGTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQSIRGG*FGRFWD
Trigger: GTCCCAGAACCTGCCAAAGCAGCCCCCTCTGATGCT...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGGTTTCCCAGTCCCTaGACCAGTTGCCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDWFPSP*TSCLWR
Trigger: CCTCCATAGGCAACTGGTGCAGGGACTGGGAAACCA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTGCCTCACCCAAGAGGTaGTGGACCACTAATGCTACG +
Preference number: 4 (lower is better)
Translates to: TLYLCCVALGQVITSLDPASPKR*WTTNAT
Trigger: CGTAGCATTAGTGGTCCAGCACCTCTTGGGTGAGGC...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGCTGACCCTACTCTTTaGATGGGCGGCTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDADPTL*MGGLCT
Trigger: AGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGAGACACCCAACCCCATaGAGCACACAGCTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQRHPTP*STQLSR
Trigger: TCGGGACAGCTGTGTGCTGCATGGGGTTGGGTGTCT...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGGAGTGACCATTTGGTaGCGCAAGGGGAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPGVTIW*RKGKVS
Trigger: ACTCACTTTCCCCTTGCGGCACCAAATGGTCACTCC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGTGTAGAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCAGCGGAGTCTCTTGCTaGTTGACCGCGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: GVEAGAIDEVDTAADHVSSGVSC*LTAGYR
Trigger: CCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCT...GGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAAGCAGCAGGTATGGGGTaGGTGGCACGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQAAGMG*VARTEA
Trigger: GGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGC...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ACCAGAGCTGAATGGACTCCTGACAGGTTAACCAGGGTTGACATGAGCCAGAGACACAGGCAGCAGGTATaGGGTGGGTGGCACGCACTG +
Preference number: 4 (lower is better)
Translates to: TRAEWTPDRLTRVDMSQRHRQQV*GGWHAL
Trigger: CAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTG...TCTCTGGCTCATGTCAACCCTGGTTAACCTGTCAGGAGTCCATTCAGCTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGGCTGTGGCCATTCTTaGTGTAGAAGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPGCGHS*CRSRCH
Trigger: ATGGCACCTGCTTCTACACCAAGAATGGCCACAGCC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAGGCTGTGGCCATTCTTaGTGTAGAAGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPGCGHS*CRSRCH
Trigger: ATGGCACCTGCTTCTACACCAAGAATGGCCACAGCC...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCCCGTGCCCTGGACCTTaGCACGCCACTCCCGCATGT +
Preference number: 4 (lower is better)
Translates to: GGTCVKLIESHSLASKYSPCPGP*HATPAC
Trigger: ACATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGG...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCCAAAAGCCGTGGCTGTaGCACAATACCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: CGTIGLASPRGAERMPIIQKPWL*HNTHDA
Trigger: TGCATCATGGGTATTGTGCCACAGCCACGGCTTTTG...GATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TCCTGGGACTTGGGGCTTCGGGAGCTCAAACTTCGGACCTCACTGTCCGTCCCATTCGAGCAAAAGCCGTaGCTGTGGCACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: SWDLGLRELKLRTSLSVPFEQKP*LWHNTH
Trigger: ATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAA...TGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGTTCGAGCAAAAGCCGTaGCTGTGGCACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLFEQKP*LWHNTH
Trigger: ATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAA...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCTGTGGCACAATACCCATGGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NRGFSHSSKSRGCGTIPMVLQQP*VEALGG
Trigger: ACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCAC...CATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAATGACTGAAACCCCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTAGCTGTCCTGGGACTTaGGGCTTCGGGAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSSCPGT*GFGSSN
Trigger: GTTTGAGCTCCCGAAGCCCCAAGTCCCAGGACAGCT...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTTCTGTTTGCTCTTGGTaGACGCGACGCCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: GVEVGREVCEGYTKAVAISVCSW*TRRHCY
Trigger: GTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGA...AATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGGTTCTGTTTGCTCTTaGTGGACGCGACGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDGSVCS*WTRRHC
Trigger: GCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTGTACTGCTGTGGTGCTaGGACTTGGTGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VLSTGGPPQVLATISVFPVLLWC*DLVESV
Trigger: AACAGACTCCACCAAGTCCCAGCACCACAGCAGTAC...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTTCCTAGCACACCGTTaGGGTAGTGCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TLYLCCVALGQVITSLDPFLAHR*GSALPP
Trigger: TGGAGGCAGAGCACTACCCCAACGGTGTGCTAGGAA...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTTTCCTAGCACACCGTTaGGGTAGTGCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSFLAHR*GSALPP
Trigger: TGGAGGCAGAGCACTACCCCAACGGTGTGCTAGGAA...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ACTTGGGGCTTCGGGAGCTCAAACTTCGGACCTCACTGTCCGTCCCATTCACCAGCCTGTCATCCATGCTaGACTCATCCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TWGFGSSNFGPHCPSHSPACHPC*THPSAG
Trigger: ACCTGCAGACGGATGAGTCCAGCATGGATGACAGGC...TGGTGAATGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGCCTGTCATCCATGCTaGACTCATCCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDACHPC*THPSAG
Trigger: ACCTGCAGACGGATGAGTCCAGCATGGATGACAGGC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGTGCAGCATCTCTGTGTaGGCCAAATTCTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLCSISV*AKFLPY
Trigger: GTACGGCAAGAATTTGGCCCACACAGAGATGCTGCA...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCACTTCTCTGGACCCTTaGCCCTGTAGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPTSLDP*PCSSLL
Trigger: GAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGT...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCATCTGCTGTGTGGCCCTaGGCCAAGTTATCACTTCTC +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPSAVWP*AKLSLL
Trigger: GAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGA...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCTGCAGGGAGCTGTCTaGCACAGTGGCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQLQGAV*HSGSEV
Trigger: GACTTCACTGCCACTGTGCCAGACAGCTCCCTGCAG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCCCATGTCCACCAATATaGAGCAGGAGCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: KMGRWPWVPSASQADTQPPCPPI*SRSLQS
Trigger: GCTTTGCAAGCTCCTGCTCCATATTGGTGGACATGG...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCAGCCTGACCCCTCATaGGGTTTATCTGCCATTCGG +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERQPDPS*GLSAIR
Trigger: CCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCTCTCAGCAAGAGAGTaGGCTCAAGCAGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLLSARE*AQAAWF
Trigger: AAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCCCACTCTAGGCTCCTaGAAGCAGGCTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQPTLGS*KQAGRT
Trigger: AGTCCTACCAGCCTGCTTCCAGGAGCCTAGAGTGGG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCACCAGTGTGCACAATGTaGAGGATGTCTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPPVCTM*RMSVAA
Trigger: AGCTGCAACAGACATCCTCCACATTGTGCACACTGG...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATCTTGAAGGTGGGGAGGAAATGGAGGAATaGAACCAGCCATGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRLHPANCPSGQCHLEGGEEMEE*NQPCQG
Trigger: GCCCTGGCATGGCTGGTTCCATTCCTCCATTTCCTC...CCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
3UTR CAA 72 bp CTGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCCATaGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LWFCLLLVDATP*LQLGLSAPVLC
Trigger: GCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATGCACGAGGTAAGATaGAACCATGTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ECGTIGLASPRGAERMPIMHEVR*NHVLQH
Trigger: GTGCTGCAGAACATGGTTTCATCTTACCTCGTGCAT...GATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR TCA 90 bp TTTGTCTGTTCTTTATGGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGGCCATGTCGGGGACTaGGGCTGGGGGAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FVCSLWTPVLPESGFQSFGHVGD*GWGSQG
Trigger: ACCCTGGCTCCCCCAGCCTCAGTCCCCGACATGGCC...GAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCGCGGCCAAACAGAATaGTCCTTTCTGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRERGQTE*SFLWQP
Trigger: AGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGTATGCCAGCAGGCTaGAGGCATCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRESMPAG*RHPAAS
Trigger: AGATGCTGCAGGATGCCTTCAGCCTGCTGGCATACT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCTAAAATGGCGCTGTTaGGGGCAGCACACACAGGTT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDLKWRC*GQHTQV
Trigger: AACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGCTAAAATGGCGCTGTTaGGGGCAGCACACACAGGTT +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLLKWRC*GQHTQV
Trigger: AACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAG...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTGCTGTGCAGAGATGGTaGAGATCTAGGCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VLSTGGPPQVLATISVFPAVQRW*RSRQEE
Trigger: TTCTTCCTGCCTAGATCTTCACCATCTCTGCACAGC...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTACTCCCCTCACAATGTaGAGCACATATGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCTPLTM*STYGNS
Trigger: GGAATTTCCATATGTGCTTCACATTGTGAGGGGAGT...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTTTGCTCTGGAAGGAGTaGCCATTTGGTGCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSLLWKE*PFGAAR
Trigger: CCTTGCGGCACCAAATGGTCACTCCTTCCAGAGCAA...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACAAAGAGGAAAATGCCTaGGGCAGCCAGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDKEENA*GSQRPQ
Trigger: TTGTGGCCTCTGGCTGCCTCAGGCATTTTCCTCTTT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTGGCCGGGAGGTCTGTaGAGGCTATACCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVWPGGL*RLYQEV
Trigger: GACTTCCTGGTATAGCCTTCACAGACCTCCCGGCCA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448631.6
CDS-3UTR TCA 90 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGACTCTGCTCCACCAGCTaGCCACAGCCCTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: RSWVQGIYCGSVCSWWTRLCSTS*PQPLMS
Trigger: AGACATCAAGGGCTGTGGTCAGCTGGTGGAGCAGAG...TCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGTGGACGCGGAGGTTaGCCTGGGAGAGACCAATGT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSGRGG*PGRDQC
Trigger: ACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGATGAAACCATGTTCTaGAGCACTGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLDETMF*STACHS
Trigger: CGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATC...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTGGACGCGACGCCATTaGTACAGCTGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGWTRRH*YSWDCL
Trigger: CAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTGGACGCGACGCCATTaGTACAGCTGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVWTRRH*YSWDCL
Trigger: CAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGGATGCCTGTCATCCATaGTGGACTCATCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERDACHP*WTHPSA
Trigger: TGCAGACGGATGAGTCCAGCATGGATGACAGGCATC...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATTGCCCCCGCAGAGCTaGCGCCGAGGATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKLPPQS*RRGCLS
Trigger: TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGCTCACTCAATGCCTaGAACTCGCGGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDCSLNA*NSRPNR
Trigger: TCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGTGGTTTCCCAGTCCCTaGACCAGTTGCCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREWFPSP*TSCLWR
Trigger: CCTCCATAGGCAACTGGTGCAGGGACTGGGAAACCA...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGGCCTCACCCAAGAGGTaGTGGACCACTAATGCTACG +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQASPKR*WTTNAT
Trigger: CGTAGCATTAGTGGTCCAGCACCTCTTGGGTGAGGC...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCATGGTCTATGGGTCTaGCAGCCCCAAGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQHGLWV*QPQGPR
Trigger: TCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTACATGGTCTATGGGTCTaGCAGCCCCAAGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVHGLWV*QPQGPR
Trigger: TCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGACGTCTCCATCCTGCCAACTGTCCATCTGGGCAGTGCCATCTTGAAGGTGGGTGTCCATCTGGGCAGTaGCATCTTGAAGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: RRLHPANCPSGQCHLEGGCPSGQ*HLEGGT
Trigger: TGTCCCACCTTCAAGATGGCACTGCCCAGATGGACA...CCCACCTTCAAGATGGCACTGCCCAGATGGACAGTTGGCAGGATGGAGACGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR GCA 90 bp ATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGGTGAGACGTCTCCATCCTaGCAACTGTCCATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MSNRKGCCPKLASTISPGETSPS*QLSIWA
Trigger: TGCCCAGATGGACAGTTGGCAGGATGGAGACGTCTC...ACCTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR GCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTCTCCAAGGTCCCTTATaGACACACCAAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSLQGPL*THQGCG
Trigger: GCCACAGCCTTGGTGTGTGCATAAGGGACCTTGGAG...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGGGCTGTGGCCATTCTTaGTGTAGAAGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERGCGHS*CRSRCH
Trigger: ATGGCACCTGCTTCTACACCAAGAATGGCCACAGCC...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGCTGCTGCCCAAAGTTaGCGTCCACAATCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGAAAQS*RPQSPQ
Trigger: CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACAGTGGACCGTGCCCTaGACCTTGGCACGCCACTCC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKQWTVP*TLARHS
Trigger: GGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCAAAAGCCGTGGCTGTaGCACAATACCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: CGECGTIGLASPRGAERMQKPWL*HNTHDA
Trigger: TGCATCATGGGTATTGTGCCACAGCCACGGCTTTTG...CATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACTTCGAGCAAAAGCCGTaGCTGTGGCACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHFEQKP*LWHNTH
Trigger: ATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAA...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAGCTGTCCTGGGACTTaGGGCTTCGGGAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVSCPGT*GFGSSN
Trigger: GTTTGAGCTCCCGAAGCCCCAAGTCCCAGGACAGCT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCCCTGTGTTGTGCATGTaGGAACTACTGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGPVLCM*ELLGPC
Trigger: ACATGGCCCCAGTAGTTCCCACATGCACAACACAGG...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCGCCATTGCTACAGCTaGGACTGTCTGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRERHCYS*DCLLLC
Trigger: ACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCTGGTTACTGGTACTGCTGTGGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGGCGCCATTGCTACAGCTaGGACTGTCTGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PGYWYCCGAGTWWSLLSWRHCYS*DCLLLC
Trigger: ACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCG...CCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGGTTCTGTTTGCTCTTaGTGGACGCGACGCCATTGC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREGSVCS*WTRRHC
Trigger: GCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTGCAGGGTATTTACTGTaGTTCTGTTTGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCAGYLL*FCLLLV
Trigger: CACCAAGAGCAAACAGAACCACAGTAAATACCCTGC...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGTAATTGACGGAGGATaGGGAAGAGGACGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDVIDGG*GRGRGG
Trigger: TCCTCCTCGTCCTCTTCCCCATCCTCCGTCAATTAC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGTGTGGTGCTGGGACTTaGTGGAGTCTGTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERCGAGT*WSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACA...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GCGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAATGTGGTGCTGGGACTTaGTGGAGTCTGTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ATPLLQLGLSAPVLCMWECGAGT*WSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACA...TTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCTGTCGCTGGTCTCCTaGTTACTGGTACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQLSLVS*LLVLLW
Trigger: CCACAGCAGTACCAGTAACCAGGAGACCAGCGACAG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGCTTTGGCAGGTTCTaGGACTCTAAAATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPCFGRF*DSKMAL
Trigger: CAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCA...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCTGCAGCATCTCTGTGTGGGCCAAATTCTTGCCGTACTCCCGGCCCAACTGCTTGCTTTGGCAGGTTCTaGGACTCTAAAATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PAASLCGPNSCRTPGPTACFGRF*DSKMAL
Trigger: CAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCA...AGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGAGATGCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATAGTAGTCATCAACTCTaGCAAAGGAGCAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHSSHQL*QRSKNP
Trigger: TGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACT...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGAGAAAACATGGTGCCTaGACAGCCTCACCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERRKHGA*TASPKR
Trigger: CCTCTTGGGTGAGGCTGTCCAGGCACCATGTTTTCT...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGACTCAAAGAAAACATaGTGCCTGGACAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPDSKKT*CLDSLT
Trigger: GGTGAGGCTGTCCAGGCACCATGTTTTCTTTGAGTC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAACCATGCCCACTAAGTaGCCCACCAAACCCTATTTG +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPTMPTK*PTKPYL
Trigger: CAAATAGGGTTTGGTGGGCCACTTAGTGGGCATGGT...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTAGTGGCAGTGAAGTCTaGCCTAGGGGACCAAGGATT +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSSGSEV*PRGPRI
Trigger: AATCCTTGGTCCCCTAGGCCAGACTTCACTGCCACT...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTGGCCACCCCAAGTCCTaGCAACCATCTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSGHPKS*QPSQSF
Trigger: GAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCC...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAAAGTCCTCTCCACAGGTaGGCCACCCCAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQSPLHR*ATPSPG
Trigger: GCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGACT...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACATAAGGGGCACCTCTaGCTGGCAGGCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKHKGHL*LAGRQA
Trigger: GGCCTGCCTGCCTGCCAGCCAGAGGTGCCCCTTATG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGCATAAGGGGCACCTCTaGCTGGCAGGCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQHKGHL*LAGRQA
Trigger: GGCCTGCCTGCCTGCCAGCCAGAGGTGCCCCTTATG...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTTGGGGATGGGGGTTCTaGCTTGCTATGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSWGWGF*LAMSAS
Trigger: ACTGGCACTCATAGCAAGCCAGAACCCCCATCCCCA...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGGGTTGCTGGTCTCCTaGTTACTGGTACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREGLLVS*LLVLLW
Trigger: CCACAGCAGTACCAGTAACCAGGAGACCAGCAACCC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp GCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCAAGAACTCAGGTTTCTaGAAGTGGGATCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: AADHVSCGECGTIGLASPKNSGF*KWDQEV
Trigger: GACTTCCTGATCCCACTTCCAGAAACCTGAGTTCTT...GGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp ACTCAATGCCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGGCTGTCAGCAGAGATaGGGAACACACGAGGATCCG +
Preference number: 4 (lower is better)
Translates to: TQCLQLAAKQNDPFCGSLGCQQR*GTHEDP
Trigger: CGGATCCTCGTGTGTTCCCCATCTCTGCTGACAGCC...CAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGCTCGGAAGAAGCATaGCTTCCCTCACAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRESSEEA*LPSQRD
Trigger: GTCCCTCTGTGAGGGAAGCCATGCTTCTTCCGAGCT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 72 bp GTAACCATGCCCACTAAGTGGCCCACCAAACCCTATTaGGGTTTCCTAGGCTGCAGCTCGGCCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: VTMPTKWPTKPY*GFLGCSSACDS
Trigger: TGAGTCACAGGCCGAGCTGCAGCCTAGGAAACCCAAATAGGGTTTGGTGGGCCACTTAGTGGGCATGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CAA 72 bp AGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCCTaGCCATGGCTGACCCTACTCTTTGCATGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RFRQGLKVQLPA*PWLTLLFAWAA
Trigger: AGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CAA 72 bp CTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTaGGTGGACGCGACGCCATTGCTACAGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LGAGYLLWFCLL*VDATPLLQLGL
Trigger: CAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
3UTR CAA 72 bp GAGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTaGCTCTTGGTGGACGCGACGCCATTGCTACAGCTG +
Preference number: 4 (lower is better)
Translates to: EELGAGYLLWFC*LLVDATPLLQL
Trigger: CAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp CCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCTTCATGTTGACGCCTTaGGCCGAGAGTCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: PHVVLNVKQEGLLPKVGVFMLTP*AESPIP
Trigger: GGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAA...GACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGAAGTCTGTTCATGTTaGCGCCTTGAGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREEVCSC*RLEPRV
Trigger: GACTCTCGGCTCAAGGCGTCAACATGAACAGACTTC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp GTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGTCACGTCTCCTGTGGTaGATGTGGGACCATAGGGCT +
Preference number: 4 (lower is better)
Translates to: VPLMRLTQQPITSPVVNVSRLLW*MWDHRA
Trigger: AGCCCTATGGTCCCACATTCACCACAGGAGACGTGA...CACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR TCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACATGCACGAGGTAAGATaGAACCATGTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHMHEVR*NHVLQH
Trigger: GTGCTGCAGAACATGGTTTCATCTTACCTCGTGCAT...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGGACGCCTGTTCTTCCTaGATCGGGGTTTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERDACSS*IGVSVI
Trigger: AATGACTGAAACCCCGATTCAGGAAGAACAGGCGTC...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTGACGCCTGTTCTTCCTaGATCGGGGTTTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: TLYLCCVALGQVITSLDPDACSS*IGVSVI
Trigger: AATGACTGAAACCCCGATTCAGGAAGAACAGGCGTC...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGGCCATGTCGGGGACTaGGGCTGGGGGAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGGHVGD*GWGSQG
Trigger: ACCCTGGCTCCCCCAGCCTCAGTCCCCGACATGGCC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGGGAGGAGGACGAGGATaGGGAGCTGGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQGGGRG*GAGCRV
Trigger: TACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCC...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCACTTGGTGGAGTCTGTTaGGTTGGACTCGGAGTAATT +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPLGGVC*VGLGVI
Trigger: AATTACTCCGAGTCCAACTCAACAGACTCCACCAAG...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCTTGGTGGAGTCTGTTaGGTTGGACTCGGAGTAATT +
Preference number: 4 (lower is better)
Translates to: CGECGTIGLASPRGAERMLGGVC*VGLGVI
Trigger: AATTACTCCGAGTCCAACTCAACAGACTCCACCAAG...CATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCGGCCAAACAGAATaGTCCTTTCTGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RSWVQGIYCGSVCSWWTRRGQTE*SFLWQP
Trigger: AGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCG...TCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGTATGCCAGCAGGCTaGAGGCATCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSMPAG*RHPAAS
Trigger: AGATGCTGCAGGATGCCTTCAGCCTGCTGGCATACT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTACAGTCTTTCCTTTCCTaGTTCCCCAATGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVQSFLS*FPNGSG
Trigger: CCCGCTACCATTGGGGAATCAGGAAAGGAAAGACTG...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CATGGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGCTTATGTCCCAAAGGTaGGCTGCCCAACTGGGACAG +
Preference number: 4 (lower is better)
Translates to: HGLWVCQPQGPRKSSSYRLMSQR*AAQLGQ
Trigger: CTGTCCCAGTTGGGCAGCTCACCTTTGGGACATAAG...CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TCCTGGGACTTGGGGCTTCGGGAGCTCAAACTTCGGACCTCACTGTCCGTCCCAGTCTATTTCCCCATATaGCCAAATGTGAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SWDLGLRELKLRTSLSVPVYFPI*PNVSQE
Trigger: CTCCTGACTCACATTTGGTCATATGGGGAAATAGAC...TGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTCAGCCAATGGCCCGTaGGCCTCCCTGGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSANGP*ASLGRR
Trigger: CCTGCGGCCCAGGGAGGCTCACGGGCCATTGGCTGA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCCTTCAAAGTAATAAATaGCACAGGCAGCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLLQSNK*HRQQVW
Trigger: CCATACCTGCTGCCTGTGGCATTTATTACTTTGAAG...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAACAGGAAGGGCTGCTaGCCAAAGTTGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGNRKGC*PKLAST
Trigger: TGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTCAAACAGGAAGGGCTaGTGCCCAAAGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSNRKG*CPKLAS
Trigger: GGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGATGAAACCATGTTCTaGAGCACTGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREDETMF*STACHS
Trigger: CGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCACCATCTCCACAAACTaGCGGCACTTGAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGTISTN*RHLSMK
Trigger: CTTCATGCTCAAGTGCCGGCAGTTTGTGGAGATGGT...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGACAGCTGGGACTGTCTaGTCCTGTGTTGTGCATGTG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRETAGTV*SCVVHV
Trigger: CACATGCACAACACAGGAGCAGACAGTCCCAGCTGT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCCATTGCTACAGCTGGTGGACGCGACGCCATTaGTACAGCTGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: IYCGSVCSWWTRRHCYSWWTRRH*YSWDCL
Trigger: CAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCA...CCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGTTGGGGTAGTGCTCTaGCTCCATCTCCATCTCACT +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREVGVVL*LHLHLT
Trigger: AGTGAGATGGAGATGGAGGCAGAGCACTACCCCAAC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTCAATGCGTGTGGACATaGTTCCTAGCACACCGTTGG +
Preference number: 4 (lower is better)
Translates to: EAGAIDEVDTAADHVSCGQCVWT*FLAHRW
Trigger: CCAACGGTGTGCTAGGAAGCATGTCCACACGCATTG...ACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACAATGCGTGTGGACATaGTTCCTAGCACACCGTTGG +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEAQCVWT*FLAHRW
Trigger: CCAACGGTGTGCTAGGAAGCATGTCCACACGCATTG...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGGATGCCTGTCATCCATaGTGGACTCATCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QCQTGRAAAQSWRPQSPQDACHP*WTHPSA
Trigger: TGCAGACGGATGAGTCCAGCATGGATGACAGGCATC...CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTAGCTGCCGCCGAGGATaGCTGTCATCCATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTSCRRG*LSSMLD
Trigger: GTCCAGCATGGATGACAGGCATCCTCGGCGGCAGCT...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCCAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: AGACKAQIQAGTESSTSGQLLTQ*LQLAAK
Trigger: TTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTG...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTGGTTTCCCAGTCCCTaGACCAGTTGCCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGWFPSP*TSCLWR
Trigger: CCTCCATAGGCAACTGGTGCAGGGACTGGGAAACCA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGGCCCTGTAGTTCTCTaGTCTGTCCAGCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRGPVVL*SVQLSG
Trigger: CCCTGAGAGCTGGACAGAGCAGAGAACTACAGGGCC...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCATTCTCTCAGAGCTGTaGAGAGATGGTGAAGATCTA +
Preference number: 4 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLILSEL*RDGEDL
Trigger: TAGATCTTCACCATCTCTGCACAGCTCTGAGAGAAT...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATAGCAGCCCAAGAACCTaGCTCCACAAGGTACTGGTT +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNSSPRT*LHKVLV
Trigger: AACCAGTACCTTGTGGAGGCAGGTTCTTGGGCTGCT...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAGTCCCAAAGGTGAGCTaGCCAACTGGGACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPVPKVS*PTGTES
Trigger: GCTCTCTGTCCCAGTTGGGCAGCTCACCTTTGGGAC...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATTCCATTTTGATGGCCTaGACCCAGCCACAGACCCAT +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNSILMA*TQPQTH
Trigger: ATGGGTCTGTGGCTGGGTGCAGGCCATCAAAATGGA...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGCTGTAGCCATGGGTTaGTGGTCTCCTGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGAVAMG*WSPGYW
Trigger: CCAGTAACCAGGAGACCAGCAACCCATGGCTACAGC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR GCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCCAGCCTTCAGAATGTaGATTAGGGAGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWPAFRM*IREAAL
Trigger: CAGGGCAGCCTCCCTAATGCACATTCTGAAGGCTGG...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTTCGCTGCCGCCATCTTaGAGGGAGCTACTATTGTGT +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSSLPPS*RELLLC
Trigger: ACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGA...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGGCTGTGGCCATTCTTaGTGTAGAAGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EAGAIDEVDTAADHVSCGGCGHS*CRSRCH
Trigger: ATGGCACCTGCTTCTACACCAAGAATGGCCACAGCC...ACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CCA 90 bp GCCTCATCTTCTTTGTGCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCCAAAAGCCGTGGCTGTaGCACAATACCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: ASSSLCLLKEWEGARWPGQKPWL*HNTHDA
Trigger: TGCATCATGGGTATTGTGCCACAGCCACGGCTTTTG...GCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCAAAAGCCGTGGCTGTaGCACAATACCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERQKPWL*HNTHDA
Trigger: TGCATCATGGGTATTGTGCCACAGCCACGGCTTTTG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGTTCGAGCAAAAGCCGTaGCTGTGGCACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLFEQKP*LWHNTH
Trigger: ATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAA...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGTTCGAGCAAAAGCCGTaGCTGTGGCACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERFEQKP*LWHNTH
Trigger: ATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAA...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKGRSAG*SRWPRP
Trigger: TGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQVLQQP*VEALGG
Trigger: ACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCAC...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKVLQQP*VEALGG
Trigger: ACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCAC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATCCTGTGTTGTGCATGTaGGAACTACTGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNPVLCM*ELLGPC
Trigger: ACATGGCCCCAGTAGTTCCCACATGCACAACACAGG...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCGCCATTGCTACAGCTaGGACTGTCTGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVRHCYS*DCLLLC
Trigger: ACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCTCTGTTTGCTCTTGGTaGACGCGACGCCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: AGACKAQIQAGTESSTSGSVCSW*TRRHCY
Trigger: GTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGA...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGCAGGGTATTTACTGTaGTTCTGTTTGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLAGYLL*FCLLLV
Trigger: CACCAAGAGCAAACAGAACCACAGTAAATACCCTGC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTGTAATTGACGGAGGATaGGGAAGAGGACGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSVIDGG*GRGRGG
Trigger: TCCTCCTCGTCCTCTTCCCCATCCTCCGTCAATTAC...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGTGTGGTGCTGGGACTTaGTGGAGTCTGTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRECGAGT*WSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACA...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGTACTGCTGTGGTGCTaGGACTTGGTGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREVLLWC*DLVESV
Trigger: AACAGACTCCACCAAGTCCCAGCACCACAGCAGTAC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTCTTGTACTGCTGTGGTGCTaGGACTTGGTGGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VEVGREVCEGYTKAVAILVLLWC*DLVESV
Trigger: AACAGACTCCACCAAGTCCCAGCACCACAGCAGTAC...AAGAATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp GGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCCCATCTCACTGTCGCTaGTCTCCTGGTTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: GRLFFLNRGFSHSSKSRGPSHCR*SPGYWY
Trigger: GTACCAGTAACCAGGAGACCAGCGACAGTGAGATGG...GCCACGGCTTTTGCTCGAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTTCCTAGCACACCGTTaGGGTAGTGCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVFLAHR*GSALPP
Trigger: TGGAGGCAGAGCACTACCCCAACGGTGTGCTAGGAA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGCCTGTCATCCATGCTaGACTCATCCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGACHPC*THPSAG
Trigger: ACCTGCAGACGGATGAGTCCAGCATGGATGACAGGC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGAGTAGTCATCAACTCTaGCAAAGGAGCAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLSSHQL*QRSKNP
Trigger: TGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTAGTCATCAACTCTaGCAAAGGAGCAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPSSHQL*QRSKNP
Trigger: TGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACT...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGCCAGGCAGGAGGAGTaGACTCTGTCTATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVARQEE*TLSMVS
Trigger: GGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCGCCTCCACAAGGTACTaGTTTCTCAACAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: KMGRWPWVPSASQADTQPASTRY*FLNRKH
Trigger: ATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGC...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCACTGCAGGGAGCTGTCTaGCACAGTGGCAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPLQGAV*HSGSEV
Trigger: GACTTCACTGCCACTGTGCCAGACAGCTCCCTGCAG...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGTAGCAAGAGAGGAATaGGGGAGATGTTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPVAREE*GRCSLN
Trigger: GTTCAGTGAACATCTCCCCCATTCCTCTCTTGCTAC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCTTCTCAGATACTGCTaGAGGGCACATCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRELLRYC*RAHQPD
Trigger: GTCAGGCTGATGTGCCCTCCAGCAGTATCTGAGAAG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTCTTCTCAGATACTGCTaGAGGGCACATCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSLLRYC*RAHQPD
Trigger: GTCAGGCTGATGTGCCCTCCAGCAGTATCTGAGAAG...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATCCTCTCCACAGCTTGTaGGGCAAAGGCTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNPLHSL*GKGLCP
Trigger: GGGACATAAGCCTTTGCCCCACAAGCTGTGGAGAGG...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCGCAGGCAGGCAGGCCTaGACTCTCAGCAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GGTCVKLIESHSLASKYSAGRQA*TLSKRV
Trigger: CACTCTCTTGCTGAGAGTCCAGGCCTGCCTGCCTGC...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGATTCCTCCTGCCTCCATaGGTCAGGTCCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRFLLPP*VRSSPS
Trigger: TGAAGGGCTGGACCTGACCCATGGAGGCAGGAGGAA...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGGAAGGAGTGACCATTTaGTGCCGCAAGGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQEGVTI*CRKGKV
Trigger: CACTTTCCCCTTGCGGCACCAAATGGTCACTCCTTC...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CATGGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGATCTGGCCACAGGTCTaGGTGCATGAGACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: HGLWVCQPQGPRKSSSYRIWPQV*VHETGS
Trigger: ACTGCCAGTCTCATGCACCCAGACCTGTGGCCAGAT...CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCACCAGAGGCCACAATCTaGCCACAGGTCTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPPEATI*PQVWVH
Trigger: ATGCACCCAGACCTGTGGCCAGATTGTGGCCTCTGG...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATTGGCCCAGGGGGTGTaGTTGGAGCAGCCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKLAQGV*LEQPGW
Trigger: CCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAATCAGGTTTCTGGAAGTaGGATCAGGAAGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VSCGECGTIGLASPRGAESGFWK*DQEVCS
Trigger: TGAACAGACTTCCTGATCCCACTTCCAGAAACCTGA...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGCCCCGCTCAGCCAATaGCCCGTGAGCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGAPLSQ*PVSLPG
Trigger: CCCAGGGAGGCTCACGGGCCATTGGCTGAGCGGGGC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630626.2
CDS-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTTCATGTTGACGCCTTaGGCCGAGAGTCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVFMLTP*AESPIP
Trigger: GGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATGAAGTCTGTTCATGTTaGCGCCTTGAGCCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNEVCSC*RLEPRV
Trigger: GACTCTCGGCTCAAGGCGTCAACATGAACAGACTTC...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAACGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCG +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQRQAGH*WGSSGP
Trigger: CGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCG...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCCAAGCCGGGCACTaGTGGGGAAGCAGTGGACCG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGRQAGH*WGSSGP
Trigger: CGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGATGCACGAGGTAAGATaGAACCATGTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLMHEVR*NHVLQH
Trigger: GTGCTGCAGAACATGGTTTCATCTTACCTCGTGCAT...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAGACGCCTGTTCTTCCTaGATCGGGGTTTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEADACSS*IGVSVI
Trigger: AATGACTGAAACCCCGATTCAGGAAGAACAGGCGTC...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCTTGGTGGAGTCTGTTaGGTTGGACTCGGAGTAATT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDLGGVC*VGLGVI
Trigger: AATTACTCCGAGTCCAACTCAACAGACTCCACCAAG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp AAGGTGGACAGTGGCTGTCAGCAGAGATGGGGAACACACGAGGATCCGGTTTTTCTAAAATGGCGCTGTTaGGGGCAGCACACACAGGTT +
Preference number: 4 (lower is better)
Translates to: KVDSGCQQRWGTHEDPVFLKWRC*GQHTQV
Trigger: AACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAG...AAAAACCGGATCCTCGTGTGTTCCCCATCTCTGCTGACAGCCACTGTCCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTGGCTGTCACAAGAGATaGATTTCCTTTACAGACAGG +
Preference number: 4 (lower is better)
Translates to: VLSTGGPPQVLATISVFPGCHKR*ISFTDR
Trigger: CCTGTCTGTAAAGGAAATTCATCTCTTGTGACAGCC...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTAATCCTGCTAGGCTATaGTCATTTAAACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCNPARL*SFKQPD
Trigger: ATCAGGCTGTTTAAATGATCATAGCCTAGCAGGATT...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAGGTTCTGGCTTGCTATaGGTGCCAGTTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVGSGLL*VPVFAL
Trigger: CAGAGCAAAAACTGGCACTCATAGCAAGCCAGAACC...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACTGCATACCTGAGTTGTaGGCAACCAAAGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHCIPEL*ATKGTF
Trigger: GAAAGTTCCTTTGGTTGCTCACAACTCAGGTATGCA...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGCATACCTGAGTTGTaGGCAACCAAAGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPCIPEL*ATKGTF
Trigger: GAAAGTTCCTTTGGTTGCTCACAACTCAGGTATGCA...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCCCAAGTATCAACTCTTaGGGACAAAGGCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPPSINS*GQRQNQ
Trigger: CTGGTTTTGCCTTTGTCCTCAAGAGTTGATACTTGG...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCCCAGCTCCCGGGTCTaGCGTCGCTGCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTPSSRV*RRCRHL
Trigger: AAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGGCAGCGGAGTCTCTTaGTGGTTGACCGCGGGATAC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKGSGVS*WLTAGY
Trigger: GTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ACCATAGGAATGTTTGTCCCAACCAGGAAGTCTGTTCATGTTGACGCCTTGAGCGGCAGCGGAGTCTCTTaGTGGTTGACCGCGGGATAC +
Preference number: 4 (lower is better)
Translates to: TIGMFVPTRKSVHVDALSGSGVS*WLTAGY
Trigger: GTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCC...GCTCAAGGCGTCAACATGAACAGACTTCCTGGTTGGGACAAACATTCCTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602815.5
CDS-3UTR GCA 90 bp AGGTGTCTGCAGGCCTACGGTGGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCCATCTTTGTGATTTTTaGCATGACCTTTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RCLQAYGGVEVGREVCEGHLCDF*HDLCSG
Trigger: TCCACTACAAAGGTCATGGCAAAAATCACAAAGATG...GCCTTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp AATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCTGTGGCACAATACCCATGTCAAACAGGAAGGGCTaGTGCCCAAAGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NRGFSHSSKSRGCGTIPMSNRKG*CPKLAS
Trigger: GGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGA...CATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAATGACTGAAACCCCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGCATGTTCTGCAGCACTaGCTGCCACTCGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQHVLQH*LPLAKP
Trigger: CGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATG...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGATGAAACCATGTTCTaGAGCACTGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVDETMF*STACHS
Trigger: CGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTACTGTGGTTCTGTTTaGTCTTGGTGGACGCGACGC +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGYCGSV*SWWTRR
Trigger: GCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGTACTGTGGTTCTGTTTaGTCTTGGTGGACGCGACGC +
Preference number: 4 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWYCGSV*SWWTRR
Trigger: GCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTA...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTACTGTGGTTCTGTTTaGTCTTGGTGGACGCGACGC +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVYCGSV*SWWTRR
Trigger: GCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCAATGCGTGTGGACATaGTTCCTAGCACACCGTTGG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVQCVWT*FLAHRW
Trigger: CCAACGGTGTGCTAGGAAGCATGTCCACACGCATTG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGATGCCTGTCATCCATaGTGGACTCATCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVDACHP*WTHPSA
Trigger: TGCAGACGGATGAGTCCAGCATGGATGACAGGCATC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATGATGCCTGTCATCCATaGTGGACTCATCCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNDACHP*WTHPSA
Trigger: TGCAGACGGATGAGTCCAGCATGGATGACAGGCATC...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTGCTCACTCAATGCCTaGAACTCGCGGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGCSLNA*NSRPNR
Trigger: TCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVQLLTQ*LQLAAK
Trigger: TTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGATGGCTAGGGCCCAGCTaGAGGGAGCTGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRWLGPS*RELSGT
Trigger: TGTGCCAGACAGCTCCCTGCAGCTGGGCCCTAGCCA...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATCAGCTTCTCAGATACTaGTGGAGGGCACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNQLLRY*WRAHQP
Trigger: AGGCTGATGTGCCCTCCAGCAGTATCTGAGAAGCTG...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTCCATTTTGATGGCCTaGACCCAGCCACAGACCCAT +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVSILMA*TQPQTH
Trigger: ATGGGTCTGTGGCTGGGTGCAGGCCATCAAAATGGA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTCATCTTCTTTGTGCTTaGTTAAGGAGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TLYLCCVALGQVITSLDPHLLCA*LRSGKA
Trigger: CGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATG...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAAAGGCAAAACCAGTGTaGACAATGTGGAGGATGTCT +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPKAKPV*TMWRMS
Trigger: AGACATCCTCCACATTGTGCACACTGGTTTTGCCTT...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ACCAGAGCTGAATGGACTCCTGACAGGTTAACCAGGGTTGACATGAGCCAGAGAAACATGGCCTCGAGCTaGAAGCTGGTCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: TRAEWTPDRLTRVDMSQRNMASS*KLVMRT
Trigger: GGTCCTCATGACCAGCTTGCAGCTCGAGGCCATGTT...TCTCTGGCTCATGTCAACCCTGGTTAACCTGTCAGGAGTCCATTCAGCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR GCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCCGCCAGGATGCAAATaGAGGTGGTATAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWPPGCK*RWYSSR
Trigger: TCTGGAGCTATACCACCTGCATTTGCATCCTGGCGG...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp AGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGAACACAGCCGCCAGGATaGAAATGCAGGTGGTATAGC +
Preference number: 4 (lower is better)
Translates to: RSWVQGIYCGSVCSWWTRTQPPG*KCRWYS
Trigger: GCTATACCACCTGCATTTGCATCCTGGCGGCTGTGT...TCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTCGCTGCCGCCATCTTaGAGGGAGCTACTATTGTGT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSLPPS*RELLLC
Trigger: ACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp ACTCAATGCCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGGCTGTGGCCATTCTTaGTGTAGAAGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TQCLQLAAKQNDPFCGSLGCGHS*CRSRCH
Trigger: ATGGCACCTGCTTCTACACCAAGAATGGCCACAGCC...CAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACTGATGGGGAAGCAGTaGACCGTGCCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKLMGKQ*TVPWTL
Trigger: CAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCCAAAAGCCGTGGCTGTaGCACAATACCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: AGACKAQIQAGTESSTSGQKPWL*HNTHDA
Trigger: TGCATCATGGGTATTGTGCCACAGCCACGGCTTTTG...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTTTCGAGCAAAAGCCGTaGCTGTGGCACAATACCCAT +
Preference number: 4 (lower is better)
Translates to: EAGAIDEVDTAADHVSCGFEQKP*LWHNTH
Trigger: ATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAA...ACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAGCTGGGTGGTCTCGATaGCCTCGCCCACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQAGWSR*PRPHGP
Trigger: AGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGC...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GGTGTAGAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCACGAGGATGAGGAGCTaGGTGCAGGGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: GVEAGAIDEVDTAADHVSTRMRS*VQGIYC
Trigger: ACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGT...GGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGTAATTGACGGAGGATaGGGAAGAGGACGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGVIDGG*GRGRGG
Trigger: TCCTCCTCGTCCTCTTCCCCATCCTCCGTCAATTAC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGGTGCTGGGACTTGGTaGAGTCTGTTGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGGAGTW*SLLSWT
Trigger: AGTCCAACTCAACAGACTCCACCAAGTCCCAGCACC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGTGCAGCATCTCTGTGTaGGCCAAATTCTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRECSISV*AKFLPY
Trigger: GTACGGCAAGAATTTGGCCCACACAGAGATGCTGCA...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATTGCTTTGGCAGGTTCTaGGACTCTAAAATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNCFGRF*DSKMAL
Trigger: CAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCA...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAGACTCAAAGAAAACATaGTGCCTGGACAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEADSKKT*CLDSLT
Trigger: GGTGAGGCTGTCCAGGCACCATGTTTTCTTTGAGTC...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GGCAGTCCCCACTTCTGTCTCGTGGTGTCCATTTTGATGGCCTGCACCCAGCCAAATGTGAAGCACATATaGAAATTCCAGCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSPHFCLVVSILMACTQPNVKHI*KFQPSW
Trigger: CCAGGACGGCTGGAATTTCCATATGTGCTTCACATT...TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAGACAGAAGTGGGGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAAGGCCTGGTGAGCAATaGGTATCTCAGGCCACACCA +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPRPGEQ*VSQATP
Trigger: TGGTGTGGCCTGAGATACCCATTGCTCACCAGGCCT...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCAAGCAGCTTGGTTTTaGCCCTCTCCACAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVQAAWF*PSPQLV
Trigger: CACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGATGCTTGCTTAAGGAGTaGGAAGGCGCTAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRCLLKE*EGARWP
Trigger: TGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCA...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGCTACTATTGTGTCACTaGGGGCGGGGAGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQLLLCH*GRGGAG
Trigger: TCCCGCTCCTCCCCGCCCCCAGTGACACAATAGTAG...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630626.2
CDS-3UTR TCA 90 bp GAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCCATCTCTTCCTTTGCTaGCAATCTTCACTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ECGTIGLASPRGAERMPIHLFLC*QSSLQS
Trigger: ACTTTGAAGTGAAGATTGTCAGCAAAGGAAGAGATG...GATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR TCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCTTGGTGGAGTCTGTTaGGTTGGACTCGGAGTAATT +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRELGGVC*VGLGVI
Trigger: AATTACTCCGAGTCCAACTCAACAGACTCCACCAAG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGGCCTGCTCGGGCCATaGGCCGGAGACACTCAGATG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGGLLGP*AGDTQM
Trigger: CATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATCGTGGTGTCCATTTTaGTGGCCTGCACCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSWCPF*WPAPSH
Trigger: GTGGCTGGGTGCAGGCCATCAAAATGGACACCACGA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGACATGGGTGCATACCTaGGTTGTGAGCAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVTWVHT*VVSNQR
Trigger: CCTTTGGTTGCTCACAACTCAGGTATGCACCCATGT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGGGTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTCCATATGACCAAATGTaGGTCAGGAGTGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: GVEVGREVCEGYTKAVAIPYDQM*VRSGFN
Trigger: ATTGAATCCACTCCTGACTCACATTTGGTCATATGG...AATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp ACTCCCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGGCTGACCACAGCCCTTaGTGTCTATTTCCCCATATG +
Preference number: 4 (lower is better)
Translates to: TPACSPQCQTGRAAAQSWADHSP*CLFPHM
Trigger: CATATGGGGAAATAGACATCAAGGGCTGTGGTCAGC...CCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGAGGCAGCGGAGTCTCTTaGTGGTTGACCGCGGGATAC +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRGSGVS*WLTAGY
Trigger: GTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCC...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAAGTGGACGCGGAGGTTaGCCTGGGAGAGACCAATGT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSGRGG*PGRDQC
Trigger: ACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCCTTCAAAGTAATAAATaGCACAGGCAGCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: YLCCVALGQVITSLDPWPLQSNK*HRQQVW
Trigger: CCATACCTGCTGCCTGTGGCATTTATTACTTTGAAG...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGATGAAACCATGTTCTaGAGCACTGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRDETMF*STACHS
Trigger: CGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATC...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGACCATCTCCACAAACTaGCGGCACTTGAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVTISTN*RHLSMK
Trigger: CTTCATGCTCAAGTGCCGGCAGTTTGTGGAGATGGT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp ACTCAATGCCTGCAACTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGACCATCTCCACAAACTaGCGGCACTTGAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TQCLQLAAKQNDPFCGSLTISTN*RHLSMK
Trigger: CTTCATGCTCAAGTGCCGGCAGTTTGTGGAGATGGT...CAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAGTTGCAGGCATTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGTTGGGGTAGTGCTCTaGCTCCATCTCCATCTCACT +
Preference number: 4 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRVGVVL*LHLHLT
Trigger: AGTGAGATGGAGATGGAGGCAGAGCACTACCCCAAC...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAGTTGGGGTAGTGCTCTaGCTCCATCTCCATCTCACT +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPVGVVL*LHLHLT
Trigger: AGTGAGATGGAGATGGAGGCAGAGCACTACCCCAAC...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTTGCCCCCGCAGAGCTaGCGCCGAGGATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTLPPQS*RRGCLS
Trigger: TGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TTATGGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTACTCCCGGCCCAACTaGTCACTCAATGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LWTPVLPESGFQSFEQKPYSRPN*SLNACN
Trigger: GTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTA...CGGCTTTTGCTCGAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR GCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAATGGTTTCCCAGTCCCTaGACCAGTTGCCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQWFPSP*TSCLWR
Trigger: CCTCCATAGGCAACTGGTGCAGGGACTGGGAAACCA...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCTCAAAGAAAACATGGTaGCTGGACAGCCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: AGACKAQIQAGTESSTSGSKKTW*LDSLTQ
Trigger: TTGGGTGAGGCTGTCCAGGCACCATGTTTTCTTTGA...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCTCATGGGGTTTATCTaGCATTCGGTTTCAGGACTA +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDLMGFI*HSVSGL
Trigger: TAGTCCTGAAACCGAATGGCAGATAAACCCCATGAG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCACAGCTTCTCAGATACTaGTGGAGGGCACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPQLLRY*WRAHQP
Trigger: AGGCTGATGTGCCCTCCAGCAGTATCTGAGAAGCTG...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGAGCCAGGTCTTCCTCCTaGCTCCATGGGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRARSSS*LHGSGP
Trigger: TGGACCTGACCCATGGAGGCAGGAGGAAGACCTGGC...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTATGAGTGCCAGTTTTTaGTCTGGAAGGAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSMSASF*SGRSDH
Trigger: ATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCAT...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATCATCTTCTTTGTGCTTaGTTAAGGAGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNHLLCA*LRSGKA
Trigger: CGCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATG...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGAAGGCAAAACCAGTGTaGACAATGTGGAGGATGTCT +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLKAKPV*TMWRMS
Trigger: AGACATCCTCCACATTGTGCACACTGGTTTTGCCTT...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTCCCAAGGTGAAAGATaGTCCAGAGAGAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSQGER*SRERWC
Trigger: ACACCACCTCTCTCTGGAGCATCTTTCACCTTGGGA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAAGCGGAGTCTCTTGCTaGTTGACCGCGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSGVSC*LTAGYR
Trigger: CCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCAGTGGACCGTGCCCTaGACCTTGGCACGCCACTCC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGQWTVP*TLARHS
Trigger: GGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CGAGGTAAGATGAAACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGTCCAGCACCAGCTTCTaGATCTTTTGTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: RGKMKPCSAALPATRQAGSSTSF*IFCLFF
Trigger: AAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGGA...CCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATCTTACCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTGGTTCTGTTTGCTCTTaGTGGACGCGACGCCATTGC +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTGSVCS*WTRRHC
Trigger: GCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACC...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGCAGGGTATTTACTGTaGTTCTGTTTGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDAGYLL*FCLLLV
Trigger: CACCAAGAGCAAACAGAACCACAGTAAATACCCTGC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGACGAGGATGAGGAGCTaGGTGCAGGGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVTRMRS*VQGIYC
Trigger: ACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAGGTGCTGGGACTTGGTaGAGTCTGTTGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPGAGTW*SLLSWT
Trigger: AGTCCAACTCAACAGACTCCACCAAGTCCCAGCACC...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCACCATCTCACTGTCGCTaGTCTCCTGGTTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: AWAACALPSQCEAHMEIPPSHCR*SPGYWY
Trigger: GTACCAGTAACCAGGAGACCAGCGACAGTGAGATGG...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTGCTTTGGCAGGTTCTaGGACTCTAAAATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGCFGRF*DSKMAL
Trigger: CAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGACAAGGGCCTCTGTCCTaGGAATGGAGTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRQGPLS*EWSLLS
Trigger: GGAAAGAAGACTCCATTCCCAGGACAGAGGCCCTTG...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAACAGGCCATGGTCTATaGGTCTGCCAGCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKTGHGL*VCQPQG
Trigger: TCCTTGGGGCTGGCAGACCCATAGACCATGGCCTGT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGGTAGCAAGAGAGGAATaGGGGAGATGTTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQVAREE*GRCSLN
Trigger: GTTCAGTGAACATCTCCCCCATTCCTCTCTTGCTAC...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTCACTTAATCTCCTaGGCCTGTTTCCTTATTTGT +
Preference number: 4 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPSHLIS*ACFLIC
Trigger: ACAAATAAGGAAACAGGCCCAGGAGATTAAGTGACT...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGCCAGTGTGCACAATGTaGAGGATGTCTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGPVCTM*RMSVAA
Trigger: AGCTGCAACAGACATCCTCCACATTGTGCACACTGG...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGTGGTTGGAGCAGCCTaGTTGGGCCTCCTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKVVGAA*LGLLSS
Trigger: GCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCAC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp GTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGAGGACCAGAGCTGAATaGACTCCTGACAGGTTAACC +
Preference number: 4 (lower is better)
Translates to: VPLMRLTQQPITSPVVNVRTRAE*TPDRLT
Trigger: GGTTAACCTGTCAGGAGTCCATTCAGCTCTGGTCCT...CACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR TCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTTCATGTTGACGCCTTaGGCCGAGAGTCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTFMLTP*AESPIP
Trigger: GGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAA...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATCACGTCTCCTGTGGTaGATGTGGGACCATAGGGCT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSRLLW*MWDHRA
Trigger: AGCCCTATGGTCCCACATTCACCACAGGAGACGTGA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGCTTGGTGGAGTCTGTTaGGTTGGACTCGGAGTAATT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGLGGVC*VGLGVI
Trigger: AATTACTCCGAGTCCAACTCAACAGACTCCACCAAG...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACGCGGCCAAACAGAATaGTCCTTTCTGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKRGQTE*SFLWQP
Trigger: AGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTCTAAAATGGCGCTGTTaGGGGCAGCACACACAGGTT +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTLKWRC*GQHTQV
Trigger: AACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAG...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCGATTCAGGCAGGGACTaGAAGTTCAACTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GGTCVKLIESHSLASKYSDSGRD*KFNFRP
Trigger: AGGCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATC...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAGGCTGTCACAAGAGATaGATTTCCTTTACAGACAGG +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVGCHKR*ISFTDR
Trigger: CCTGTCTGTAAAGGAAATTCATCTCTTGTGACAGCC...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGCCGCAAGGGGAAAGTaGGTAGGGAAGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGAARGK*VGKAAP
Trigger: GGGAGCAGCCTTCCCTACTCACTTTCCCCTTGCGGC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCTTCAAAGTAATAAATaGCACAGGCAGCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERLQSNK*HRQQVW
Trigger: CCATACCTGCTGCCTGTGGCATTTATTACTTTGAAG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTTCTGCAGCACTGCCTaGCACTCGCCAAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGFCSTA*HSPSRA
Trigger: TGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TTATGGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGAGCAAAAGCCGGATGAAACCATGTTCTaGAGCACTGCCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LWTPVLPESGFQSFEQKPDETMF*STACHS
Trigger: CGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATC...CGGCTTTTGCTCGAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTACAGCTGGGACTGTCTaGTCCTGTGTTGTGCATGTG +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTTAGTV*SCVVHV
Trigger: CACATGCACAACACAGGAGCAGACAGTCCCAGCTGT...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATACTCCCGGCCCAACTaGTCACTCAATGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKYSRPN*SLNACN
Trigger: GTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACTCATGGGGTTTATCTaGCATTCGGTTTCAGGACTA +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEALMGFI*HSVSGL
Trigger: TAGTCCTGAAACCGAATGGCAGATAAACCCCATGAG...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATATGAGTGCCAGTTTTTaGTCTGGAAGGAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNMSASF*SGRSDH
Trigger: ATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCAT...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCTAGTAGGGCTCCGCTaGCTGGCTGCCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGLVGLR*LAATWV
Trigger: CACCCATGTGGCAGCCAGGCAGCGGAGCCCTACTAG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTATGCAAAGAGGAAAATaGCTGAGGCAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTMQRGK*LRQPEA
Trigger: GGCCTCTGGCTGCCTCAGGCATTTTCCTCTTTGCAT...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGCTGTAGCCATGGGTTaGTGGTCTCCTGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKAVAMG*WSPGYW
Trigger: CCAGTAACCAGGAGACCAGCAACCCATGGCTACAGC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCAGGTATGGGGTGGGTaGCACGCACTGAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGQVWGG*HALRPH
Trigger: ATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCACAGGCAGCAGGTATaGGGTGGGTGGCACGCACTG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGHRQQV*GGWHAL
Trigger: CAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGTCCAGCACCAGCTTCTaGATCTTTTGTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERSSTSF*IFCLFF
Trigger: AAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGGA...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGGTAGAAGCGCTGGGTaGTCTCGATGGCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGGRSAG*SRWPRP
Trigger: TGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAGTGCTCCAGCAGCCCTaGGTAGAAGCGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQVLQQP*VEALGG
Trigger: ACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCAC...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTGGTGCTGGGACTTGGTaGAGTCTGTTGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTGAGTW*SLLSWT
Trigger: AGTCCAACTCAACAGACTCCACCAAGTCCCAGCACC...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAACCATCTCACTGTCGCTaGTCTCCTGGTTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQPSHCR*SPGYWY
Trigger: GTACCAGTAACCAGGAGACCAGCGACAGTGAGATGG...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAACCATGCCCACTAAGTaGCCCACCAAACCCTATTTG +
Preference number: 4 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRTMPTK*PTKPYL
Trigger: CAAATAGGGTTTGGTGGGCCACTTAGTGGGCATGGT...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGGCCTCCACAAGGTACTaGTTTCTCAACAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQASTRY*FLNRKH
Trigger: ATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGC...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACAGTCACTTAATCTCCTaGGCCTGTTTCCTTATTTGT +
Preference number: 4 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHSHLIS*ACFLIC
Trigger: ACAAATAAGGAAACAGGCCCAGGAGATTAAGTGACT...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGATCTGGCCACAGGTCTaGGTGCATGAGACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQIWPQV*VHETGS
Trigger: ACTGCCAGTCTCATGCACCCAGACCTGTGGCCAGAT...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGGGTTGCTGGTCTCCTaGTTACTGGTACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKGLLVS*LLVLLW
Trigger: CCACAGCAGTACCAGTAACCAGGAGACCAGCAACCC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR TCA 90 bp GTTCTGTTTGCTCTTGGTGGACGCGACGCCATTGCTACAGCTGGGACTGTCTGCCATCTCTTCCTTTGCTaGCAATCTTCACTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VLFALGGRDAIATAGTVCHLFLC*QSSLQS
Trigger: ACTTTGAAGTGAAGATTGTCAGCAAAGGAAGAGATG...GCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCATCTCTTCCTTTGCTaGCAATCTTCACTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ILCYRPLHVKGRERETERHLFLC*QSSLQS
Trigger: ACTTTGAAGTGAAGATTGTCAGCAAAGGAAGAGATG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACAATAAATCACTTGGCTaGGGTGACAGAGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: PANTVLQAAAREGERERDNKSLG*GDRDSS
Trigger: AGAAGAATCTCTGTCACCTCAGCCAAGTGATTTATT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCGGTTCTGGCTTGCTATaGGTGCCAGTTTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGTCVKLIESHSLASKYSGSGLL*VPVFAL
Trigger: CAGAGCAAAAACTGGCACTCATAGCAAGCCAGAACC...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTGTCTGTTCTTTATGGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCAGTGGACGCGGAGGTTaGCCTGGGAGAGACCAATGT +
Preference number: 4 (lower is better)
Translates to: FVCSLWTPVLPESGFQSFSGRGG*PGRDQC
Trigger: ACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACT...GAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCTTCAAAGTAATAAATaGCACAGGCAGCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGRELQSNK*HRQQVW
Trigger: CCATACCTGCTGCCTGTGGCATTTATTACTTTGAAG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp GGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCCTTCAAAGTAATAAATaGCACAGGCAGCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: GRLFFLNRGFSHSSKSRGLQSNK*HRQQVW
Trigger: CCATACCTGCTGCCTGTGGCATTTATTACTTTGAAG...GCCACGGCTTTTGCTCGAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCATGTTCTGCAGCACTaGCTGCCACTCGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTHVLQH*LPLAKP
Trigger: CGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATACTGTGGTTCTGTTTaGTCTTGGTGGACGCGACGC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKYCGSV*SWWTRR
Trigger: GCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGACTGGTACTGCTGTGGTaGTGGGACTTGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRLVLLW*WDLVES
Trigger: AGACTCCACCAAGTCCCAGCACCACAGCAGTACCAG...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACAATGCGTGTGGACATaGTTCCTAGCACACCGTTGG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKQCVWT*FLAHRW
Trigger: CCAACGGTGTGCTAGGAAGCATGTCCACACGCATTG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCAGCTGCCGCCGAGGATaGCTGTCATCCATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSCRRG*LSSMLD
Trigger: GTCCAGCATGGATGACAGGCATCCTCGGCGGCAGCT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGATTGGGTTTCCTAGGCTaGAGCTCGGCCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRLGFLG*SSACDS
Trigger: TGAGTCACAGGCCGAGCTGCAGCCTAGGAAACCCAA...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTGCTCTGCTACTAATTTaGTATGTGACTTTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSALLLI*YVTLAK
Trigger: CTTGGCTAAAGTCACATAGCAAATTAGTAGCAGAGC...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGGGAGTGACCATTTGGTaGCGCAAGGGGAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQGVTIW*RKGKVS
Trigger: ACTCACTTTCCCCTTGCGGCACCAAATGGTCACTCC...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGCCTCATCTTCTTTGTaGTTGCTTAAGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVASSSL*LLKEWE
Trigger: TTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGATGCAAAGAGGAAAATaGCTGAGGCAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQMQRGK*LRQPEA
Trigger: GGCCTCTGGCTGCCTCAGGCATTTTCCTCTTTGCAT...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTGTCTGTTCTTTATGGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCAGCGGAGTCTCTTGCTaGTTGACCGCGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: FVCSLWTPVLPESGFQSFSGVSC*LTAGYR
Trigger: CCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCT...GAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCTGATGGGGAAGCAGTaGACCGTGCCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTLMGKQ*TVPWTL
Trigger: CAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTTTGTCTGTTCTTTATaGACGCCTGTTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TLYLCCVALGQVITSLDPFVCSL*TPVLPE
Trigger: TTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACCTGTGTTGTGCATGTaGGAACTACTGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKPVLCM*ELLGPC
Trigger: ACATGGCCCCAGTAGTTCCCACATGCACAACACAGG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATCTGTTTGCTCTTGGTaGACGCGACGCCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSVCSW*TRRHCY
Trigger: GTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGCAGGGTATTTACTGTaGTTCTGTTTGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGAGYLL*FCLLLV
Trigger: CACCAAGAGCAAACAGAACCACAGTAAATACCCTGC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTACGAGGATGAGGAGCTaGGTGCAGGGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTTRMRS*VQGIYC
Trigger: ACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGT...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGGTGCTGGGACTTGGTaGAGTCTGTTGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKGAGTW*SLLSWT
Trigger: AGTCCAACTCAACAGACTCCACCAAGTCCCAGCACC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGACTGTCGCTGGTCTCCTaGTTACTGGTACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRLSLVS*LLVLLW
Trigger: CCACAGCAGTACCAGTAACCAGGAGACCAGCGACAG...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAGTAGTCATCAACTCTaGCAAAGGAGCAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: KALHESNQPILCYRPLHVSSHQL*QRSKNP
Trigger: TGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGCCCATCACCAGCAGTTaGTCCAATTCAAACATTTTT +
Preference number: 4 (lower is better)
Translates to: PRTLYLCCVALGQVITSLPITSS*SNSNIF
Trigger: AAAAATGTTTGAATTGGACCAACTGCTGGTGATGGG...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACAAGCAGCTTGGTTTTaGCCCTCTCCACAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKQAAWF*PSPQLV
Trigger: CACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGTAGCCATGGGTTGCTaGTCTCCTGGTTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKVAMGC*SPGYWY
Trigger: GTACCAGTAACCAGGAGACCAGCAACCCATGGCTAC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CCA 90 bp ATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCCATTGCTACAGCTGGCACCTCTGTTGGACCTaGAGCAAAGAACTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: IYCGSVCSWWTRRHCYSWHLCWT*SKELRF
Trigger: AAACCTGAGTTCTTTGCTCCAGGTCCAACAGAGGTG...CCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp AAGGTGGACAGTGGCTGTCAGCAGAGATGGGGAACACACGAGGATCCGGTTTTTGGATGCAAATGCAGGTaGTATAGCTCCAGAATCCAT +
Preference number: 4 (lower is better)
Translates to: KVDSGCQQRWGTHEDPVFGCKCR*YSSRIH
Trigger: ATGGATTCTGGAGCTATACCACCTGCATTTGCATCC...AAAAACCGGATCCTCGTGTGTTCCCCATCTCTGCTGACAGCCACTGTCCACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGTGGGTGGCACGCACTaGGGCCGCATCTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGVGGTH*GRIFVI
Trigger: AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCAC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTGGCCGGGAGGTCTGTaGAGGCTATACCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGWPGGL*RLYQGC
Trigger: ACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317506.8
ENST00000602506.5
ENST00000602677.5
CDS-3UTR TCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGAGATTCAGGCAGGGACTaGAAGTTCAACTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRDSGRD*KFNFRP
Trigger: AGGCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATC...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGAGGGCACATCAGCCTaGCCCCTCATGGGGTTTATC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGEGTSA*PLMGFI
Trigger: GATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCCAACTTGGACTCAGCTaGAACAGTGAGATAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GGTCVKLIESHSLASKYSQLGLS*NSEIRH
Trigger: GTGCCTTATCTCACTGTTTCAGCTGAGTCCAAGTTG...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAAGTGGACGCGGAGGTTaGCCTGGGAGAGACCAATGT +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQSGRGG*PGRDQC
Trigger: ACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTGGACGCGACGCCATTaGTACAGCTGGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTWTRRH*YSWDCL
Trigger: CAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAAGCATCAGAGGGGGCTaGTTTGGCAGGTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQSIRGG*FGRFWD
Trigger: GTCCCAGAACCTGCCAAAGCAGCCCCCTCTGATGCT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTAGCATCAGAGGGGGCTaGTTTGGCAGGTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTSIRGG*FGRFWD
Trigger: GTCCCAGAACCTGCCAAAGCAGCCCCCTCTGATGCT...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTGGCCCTGTAGTTCTCTaGTCTGTCCAGCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTGPVVL*SVQLSG
Trigger: CCCTGAGAGCTGGACAGAGCAGAGAACTACAGGGCC...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTAGACACCCAACCCCATaGAGCACACAGCTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTRHPTP*STQLSR
Trigger: TCGGGACAGCTGTGTGCTGCATGGGGTTGGGTGTCT...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCAGCGGAGTCTCTTGCTaGTTGACCGCGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSGVSC*LTAGYR
Trigger: CCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACAAAAGCCGTGGCTGTaGCACAATACCCATGATGCA +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKQKPWL*HNTHDA
Trigger: TGCATCATGGGTATTGTGCCACAGCCACGGCTTTTG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTTTTGTCTGTTCTTTATaGACGCCTGTTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: EAGAIDEVDTAADHVSCGFVCSL*TPVLPE
Trigger: TTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA...ACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTCCAGCACCAGCTTCTaGATCTTTTGTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSSTSF*IFCLFF
Trigger: AAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGGA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTAGCTGTCCTGGGACTTaGGGCTTCGGGAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTSCPGT*GFGSSN
Trigger: GTTTGAGCTCCCGAAGCCCCAAGTCCCAGGACAGCT...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAACGAGGATGAGGAGCTaGGTGCAGGGTATTTACTGT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKTRMRS*VQGIYC
Trigger: ACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGATGTGGTGCTGGGACTTaGTGGAGTCTGTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRCGAGT*WSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACA...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCAGGGATCTACAGTTCTTaGGATGCTATAAACCAATGT +
Preference number: 4 (lower is better)
Translates to: LTLLFAWAACALPSQCEAGIYSS*DAINQC
Trigger: ACATTGGTTTATAGCATCCCAAGAACTGTAGATCCC...TGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTACCCATCACCAGCAGTTaGTCCAATTCAAACATTTTT +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVPITSS*SNSNIF
Trigger: AAAAATGTTTGAATTGGACCAACTGCTGGTGATGGG...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAACCTCCTAACAGGCCATaGTCTATGGGTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQPPNRP*SMGLPA
Trigger: GGCTGGCAGACCCATAGACCATGGCCTGTTAGGAGG...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGCTCTCAGCAAGAGAGTaGGCTCAAGCAGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQLSARE*AQAAWF
Trigger: AAACCAAGCTGCTTGAGCCCACTCTCTTGCTGAGAG...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATTCCTCCTGCCTCCATaGGTCAGGTCCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQFLLPP*VRSSPS
Trigger: TGAAGGGCTGGACCTGACCCATGGAGGCAGGAGGAA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCATCTCACTGTCGCTGTaGGGAGGGGTTGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGISLSL*GGVEVG
Trigger: TCCCACCTCAACCCCTCCCCACAGCGACAGTGAGAT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR TCA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATCATCTCTTCCTTTGCTaGCAATCTTCACTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNHLFLC*QSSLQS
Trigger: ACTTTGAAGTGAAGATTGTCAGCAAAGGAAGAGATG...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAATGCACGAGGTAAGATaGAACCATGTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKMHEVR*NHVLQH
Trigger: GTGCTGCAGAACATGGTTTCATCTTACCTCGTGCAT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCGCGGCCAAACAGAATaGTCCTTTCTGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTRGQTE*SFLWQP
Trigger: AGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAATAAATCACTTGGCTaGGGTGACAGAGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGNKSLG*GDRDSS
Trigger: AGAAGAATCTCTGTCACCTCAGCCAAGTGATTTATT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAATCCTGCTAGGCTATaGTCATTTAAACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGNPARL*SFKQPD
Trigger: ATCAGGCTGTTTAAATGATCATAGCCTAGCAGGATT...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATCATCTTTGTGATTTTTaGCATGACCTTTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNHLCDF*HDLCSG
Trigger: TCCACTACAAAGGTCATGGCAAAAATCACAAAGATG...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp GTAGAGGTTGGCCGGGAGGTCTGTGAAGGCTATACCAAGGCTGTGGCCATTCTTCATCTTTGTGATTTTTaGCATGACCTTTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: VEVGREVCEGYTKAVAILHLCDF*HDLCSG
Trigger: TCCACTACAAAGGTCATGGCAAAAATCACAAAGATG...AAGAATGGCCACAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR GCA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGCATCTTTGTGATTTTTaGCATGACCTTTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: ESNQPILCYRPLHVKGREHLCDF*HDLCSG
Trigger: TCCACTACAAAGGTCATGGCAAAAATCACAAAGATG...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAAACAGGAAGGGCTGCTaGCCAAAGTTGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQNRKGC*PKLAST
Trigger: TGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCTGGTACTGCTGTGGTaGTGGGACTTGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTLVLLW*WDLVES
Trigger: AGACTCCACCAAGTCCCAGCACCACAGCAGTACCAG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCTGGTACTGCTGTGGTaGTGGGACTTGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGLVLLW*WDLVES
Trigger: AGACTCCACCAAGTCCCAGCACCACAGCAGTACCAG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTTGGGTTTCCTAGGCTaGAGCTCGGCCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTLGFLG*SSACDS
Trigger: TGAGTCACAGGCCGAGCTGCAGCCTAGGAAACCCAA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTGTCTGTTCTTTATGGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGGCTGTGGCCATTCTTaGTGTAGAAGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: FVCSLWTPVLPESGFQSFGCGHS*CRSRCH
Trigger: ATGGCACCTGCTTCTACACCAAGAATGGCCACAGCC...GAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CCA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTTTGTCTGTTCTTTATaGACGCCTGTTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LHESNQPILCYRPLHVKGFVCSL*TPVLPE
Trigger: TTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp AAGGTGGACAGTGGCTGTCAGCAGAGATGGGGAACACACGAGGATCCGGTTTTTTTTGTCTGTTCTTTATaGACGCCTGTTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KVDSGCQQRWGTHEDPVFFVCSL*TPVLPE
Trigger: TTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA...AAAAACCGGATCCTCGTGTGTTCCCCATCTCTGCTGACAGCCACTGTCCACCTT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAGGTTCTGTTTGCTCTTaGTGGACGCGACGCCATTGC +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQGSVCS*WTRRHC
Trigger: GCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACC...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGCCTGTCATCCATGCTaGACTCATCCGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGACHPC*THPSAG
Trigger: ACCTGCAGACGGATGAGTCCAGCATGGATGACAGGC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGATGCAGCATCTCTGTGTaGGCCAAATTCTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRCSISV*AKFLPY
Trigger: GTACGGCAAGAATTTGGCCCACACAGAGATGCTGCA...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAAAGCTATCACCAACTTaGATAGGCTTCATCACTAAA +
Preference number: 4 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVKLSPT*IGFITK
Trigger: TTTAGTGATGAAGCCTATCCAAGTTGGTGATAGCTT...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATAAGCTATCACCAACTTaGATAGGCTTCATCACTAAA +
Preference number: 4 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNKLSPT*IGFITK
Trigger: TTTAGTGATGAAGCCTATCCAAGTTGGTGATAGCTT...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCTTCCGGCCTTGCCATaGCTGACCCTACTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGLPALP*LTLLFA
Trigger: TGCAAAGAGTAGGGTCAGCCATGGCAAGGCCGGAAG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATGGGGATGGGGGTTCTaGCTTGCTATGAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQWGWGF*LAMSAS
Trigger: ACTGGCACTCATAGCAAGCCAGAACCCCCATCCCCA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTGCTTGCTTAAGGAGTaGGAAGGCGCTAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGCLLKE*EGARWP
Trigger: TGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGCA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTTCATGTTGACGCCTTaGGCCGAGAGTCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTFMLTP*AESPIP
Trigger: GGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTTCATGTTGACGCCTTaGGCCGAGAGTCCTATTCCC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGFMLTP*AESPIP
Trigger: GGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATTCTTTCCAGCAGCCTaGCACACAGAAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQFFPAA*HTEALR
Trigger: CCTGAGAGCTTCTGTGTGTCAGGCTGCTGGAAAGAA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTTCTTTCCAGCAGCCTaGCACACAGAAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTFFPAA*HTEALR
Trigger: CCTGAGAGCTTCTGTGTGTCAGGCTGCTGGAAAGAA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAACTCCCCTCACAATGTaGAGCACATATGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKTPLTM*STYGNS
Trigger: GGAATTTCCATATGTGCTTCACATTGTGAGGGGAGT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTACTGTGGTTCTGTTTaGTCTTGGTGGACGCGACGC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGYCGSV*SWWTRR
Trigger: GCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATGCTCACTCAATGCCTaGAACTCGCGGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQCSLNA*NSRPNR
Trigger: TCTGTTTGGCCGCGAGTTGCAGGCATTGAGTGAGCA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAACAACTGCTCACTCAATaGCTGCAACTCGCGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQQLLTQ*LQLAAK
Trigger: TTTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTG...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAAATTCTCTCAGAGCTGTaGAGAGATGGTGAAGATCTA +
Preference number: 4 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQILSEL*RDGEDL
Trigger: TAGATCTTCACCATCTCTGCACAGCTCTGAGAGAAT...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGCCTCATCTTCTTTGTaGTTGCTTAAGGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKASSSL*LLKEWE
Trigger: TTCCCACTCCTTAAGCAAGCACAAAGAAGATGAGGC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTCGCTGCCGCCATCTTaGAGGGAGCTACTATTGTGT +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSLPPS*RELLLC
Trigger: ACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCTCCAGCACCAGCTTCTaGATCTTTTGTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GGTCVKLIESHSLASKYSSSTSF*IFCLFF
Trigger: AAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGGA...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCAGCACCAGCTTCTaGATCTTTTGTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: YGAGACKAQIQAGTESSTSSTSF*IFCLFF
Trigger: AAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGGA...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAACCTGTGTTGTGCATGTaGGAACTACTGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQPVLCM*ELLGPC
Trigger: ACATGGCCCCAGTAGTTCCCACATGCACAACACAGG...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTCTGTTTGCTCTTGGTaGACGCGACGCCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTSVCSW*TRRHCY
Trigger: GTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAAGTGGACTCTGTCTATaGTTTCCCAGTCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQSGLCL*FPSPCT
Trigger: GGTGCAGGGACTGGGAAACCATAGACAGAGTCCACT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGATCACCCAAGAGGTGCTaGACCACTAATGCTACGATA +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRSPKRC*TTNATI
Trigger: TATCGTAGCATTAGTGGTCCAGCACCTCTTGGGTGA...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTCTGCTGTGTGGCCCTaGGCCAAGTTATCACTTCTC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSAVWP*AKLSLL
Trigger: GAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTCTACCTCTGCTGTGTaGCCCTGGGCCAAGTTATCA +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTSTSAV*PWAKLS
Trigger: TGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAAATGTGAAGCACATATaGAAATTCCAGCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKNVKHI*KFQPSW
Trigger: CCAGGACGGCTGGAATTTCCATATGTGCTTCACATT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTGAAGGAGTGACCATTTaGTGCCGCAAGGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTEGVTI*CRKGKV
Trigger: CACTTTCCCCTTGCGGCACCAAATGGTCACTCCTTC...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTGTAGCCATGGGTTGCTaGTCTCCTGGTTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTVAMGC*SPGYWY
Trigger: GTACCAGTAACCAGGAGACCAGCAACCCATGGCTAC...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448631.6
CDS-3UTR TCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTGACGCCTGTTCTTCCTaGATCGGGGTTTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTDACSS*IGVSVI
Trigger: AATGACTGAAACCCCGATTCAGGAAGAACAGGCGTC...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR TCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGACCAAGTATCAACTCTTaGGGACAAAGGCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRPSINS*GQRQNQ
Trigger: CTGGTTTTGCCTTTGTCCTCAAGAGTTGATACTTGG...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCACCATCTCCACAAACTaGCGGCACTTGAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGTISTN*RHLSMK
Trigger: CTTCATGCTCAAGTGCCGGCAGTTTGTGGAGATGGT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATATGGAGCAGGAGCTTaGAAAGCCCAGATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQYGAGA*KAQIQA
Trigger: TGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CTTGCTATGAGTGCCAGTTTTTGCTCTGGAAGGAGTGACCATTTGGTGCCGCAAGCTCTGCTACTAATTTaGTATGTGACTTTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LAMSASFCSGRSDHLVPQALLLI*YVTLAK
Trigger: CTTGGCTAAAGTCACATAGCAAATTAGTAGCAGAGC...TTGCGGCACCAAATGGTCACTCCTTCCAGAGCAAAAACTGGCACTCATAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATGCAGCATCTCTGTGTaGGCCAAATTCTTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQCSISV*AKFLPY
Trigger: GTACGGCAAGAATTTGGCCCACACAGAGATGCTGCA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTGCTTTGGCAGGTTCTaGGACTCTAAAATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGCFGRF*DSKMAL
Trigger: CAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAACCATGTCCACCAATATaGAGCAGGAGCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQPCPPI*SRSLQS
Trigger: GCTTTGCAAGCTCCTGCTCCATATTGGTGGACATGG...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR TCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACATCTCTTCCTTTGCTaGCAATCTTCACTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKHLFLC*QSSLQS
Trigger: ACTTTGAAGTGAAGATTGTCAGCAAAGGAAGAGATG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAATGCACGAGGTAAGATaGAACCATGTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQMHEVR*NHVLQH
Trigger: GTGCTGCAGAACATGGTTTCATCTTACCTCGTGCAT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCATGCACGAGGTAAGATaGAACCATGTTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGMHEVR*NHVLQH
Trigger: GTGCTGCAGAACATGGTTTCATCTTACCTCGTGCAT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR TCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCAACTTGGACTCAGCTaGAACAGTGAGATAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGQLGLS*NSEIRH
Trigger: GTGCCTTATCTCACTGTTTCAGCTGAGTCCAAGTTG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATTTGTCTGTTCTTTATaGACGCCTGTTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKFVCSL*TPVLPE
Trigger: TTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGGGATCTACAGTTCTTaGGATGCTATAAACCAATGT +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKGIYSS*DAINQC
Trigger: ACATTGGTTTATAGCATCCCAAGAACTGTAGATCCC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
3UTR CAA 72 bp ACCCACAAGTTTCATGCTAATGCCAAGTATCAACTCTaGAGGACAAAGGCAAAACCAGTGTGCACAATGTGG +
Preference number: 4 (lower is better)
Translates to: THKFHANAKYQL*RTKAKPVCTMW
Trigger: CCACATTGTGCACACTGGTTTTGCCTTTGTCCTCAAGAGTTGATACTTGGCATTAGCATGAAACTTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR GCA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACATCTTTGTGATTTTTaGCATGACCTTTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKHLCDF*HDLCSG
Trigger: TCCACTACAAAGGTCATGGCAAAAATCACAAAGATG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGATTTGTCTGTTCTTTATaGACGCCTGTTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRFVCSL*TPVLPE
Trigger: TTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCAGTAGTCATCAACTCTaGCAAAGGAGCAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSSHQL*QRSKNP
Trigger: TGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAACTTCAAAGTAATAAATaGCACAGGCAGCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQLQSNK*HRQQVW
Trigger: CCATACCTGCTGCCTGTGGCATTTATTACTTTGAAG...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR GCA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCATCTTTGTGATTTTTaGCATGACCTTTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGHLCDF*HDLCSG
Trigger: TCCACTACAAAGGTCATGGCAAAAATCACAAAGATG...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CCA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAAAGCTATCACCAACTTaGATAGGCTTCATCACTAAA +
Preference number: 4 (lower is better)
Translates to: SPTWIGFITKLAETSSAQKLSPT*IGFITK
Trigger: TTTAGTGATGAAGCCTATCCAAGTTGGTGATAGCTT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CCA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTAAGCTATCACCAACTTaGATAGGCTTCATCACTAAA +
Preference number: 4 (lower is better)
Translates to: PTWIGFITKLAETSSAQTKLSPT*IGFITK
Trigger: TTTAGTGATGAAGCCTATCCAAGTTGGTGATAGCTT...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS GCA 90 bp CGCGGCAGCGGAGTCTCTTGCTGGTTGACCGCGGGATACAGGCGCTaGAAGCGCCGGCTCAGCTCCTGCTCCCCAGGGGACGGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: RGSGVSCWLTAGYRR*KRRLSSCSPGDGSP
Trigger: CGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602525.5
ENST00000602638.5
ENST00000602677.5
ENST00000602815.5
ENST00000602887.1
ENST00000630626.2
CDS-3UTR CAA 90 bp CTGATGGGGAAGCAGTGGACCGTGCCCTGGACCTTGGCACGCCACTCCCGCATGGGAGTCTCTTGCTGGTaGACCGCGGGATACAGGCGC +
Preference number: 5 (lower is better)
Translates to: LMGKQWTVPWTLARHSRMGVSCW*TAGYRR
Trigger: GCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCC...CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CAA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGTCTGTGGCAGCCTGGTaGCCCCCGCAGAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLSVAAW*PPQSCR
Trigger: GCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGA...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGAACCGTGCCCTGGACCTaGGCACGCCACTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: STLAKEQEPRPARAMSRRTVPWT*ARHSRM
Trigger: CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGT...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS CCA 90 bp GGGGTTGAGGTGGGAGTTGGCCCAGGGGGTGTGGTTGGAGCAGCCTaGTTGGGCCTCCTTTCAAGCTGTAGCCATGGGTTGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GVEVGVGPGGVVGAA*LGLLSSCSHGLLVS
Trigger: GGAGACCAGCAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAACTCCCACCTCAACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCGGAGTCTCTTGCTGGTaGACCGCGGGATACAGGCGC +
Preference number: 5 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLGVSCW*TAGYRR
Trigger: GCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCC...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCGGAGTCTCTTGCTGGTaGACCGCGGGATACAGGCGC +
Preference number: 5 (lower is better)
Translates to: AADHVSCGECGTIGLASPGVSCW*TAGYRR
Trigger: GCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCC...GGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CAA 90 bp CCAGCCATGCCAGGGCCTGGCCTGCGCCCAGCCTTCAGAATGTGCATTAGGGAGGTCGCTGCCGCCATCTaGGAGGGAGCTACTATTGTG +
Preference number: 5 (lower is better)
Translates to: PAMPGPGLRPAFRMCIREVAAAI*EGATIV
Trigger: CACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGAC...CTCCCTAATGCACATTCTGAAGGCTGGGCGCAGGCCAGGCCCTGGCATGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CAA 90 bp GCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCGGCTGCTGCCCAAAGTaGGCGTCCACAATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: AADHVSCGECGTIGLASPGCCPK*ASTISP
Trigger: TGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCC...GGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACACCGTGCCCTGGACCTaGGCACGCCACTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDTVPWT*ARHSRM
Trigger: CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAAAAGAGGAGGTTGGGGTaGTGCTCCAGCAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: VSCGECGTIGLASPRGAEKRRLG*CSSSPG
Trigger: CCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTT...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATTCTGTGGCAGCCTGGTaGCCCCCGCAGAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNSVAAW*PPQSCR
Trigger: GCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGA...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCTCGTGGTGTGTGTGGGCCAAATTCTaGCCGTACTCCCGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: RSGKALGGQAVPTSVSWCVWAKF*PYSRPN
Trigger: GTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACAC...ACACCACGAGACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS CCA 90 bp TTGAGGTGGGAGTTGGCCCAGGGGGTGTGGTTGGAGCAGCCTGGTTaGGCCTCCTTTCAAGCTGTAGCCATGGGTTGCTGGTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LRWELAQGVWLEQPG*ASFQAVAMGCWSPG
Trigger: ACCAGGAGACCAGCAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAACTCCCACCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp CGAGGTAAGATGAAACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCGGCAGCGGAGTCTCTaGCTGGTTGACCGCGGGATA +
Preference number: 5 (lower is better)
Translates to: RGKMKPCSAALPATRQAGRQRSL*LVDRGI
Trigger: TATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCG...CCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATCTTACCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CAA 90 bp CTCGCGGCCAAACAGAATGATCCTTTCTGTGGCAGCCTGGTTGCCCCCGCAGAGGGCTGCTGCCCAAAGTaGGCGTCCACAATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LAAKQNDPFCGSLVAPAEGCCPK*ASTISP
Trigger: TGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCC...CTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAAGGCTGCTGCCCAAAGTaGGCGTCCACAATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: VSCGECGTIGLASPRGAEGCCPK*ASTISP
Trigger: TGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCC...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CAA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCGGCTGCTGCCCAAAGTaGGCGTCCACAATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVGCCPK*ASTISP
Trigger: TGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCC...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCCACAATCTCCCCAGACCGTGCCCTGGACCTaGGCACGCCACTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: QCQTGRAAAQSWRPQSPQTVPWT*ARHSRM
Trigger: CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGT...CTGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CAA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATACCGTGCCCTGGACCTaGGCACGCCACTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNTVPWT*ARHSRM
Trigger: CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGT...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CTGATGGGGAAGCAGTGGACCGTGCCCTGGACCTTGGCACGCCACTCCCGCATGTTACTGTGGTTCTGTTaGCTCTTGGTGGACGCGACG +
Preference number: 5 (lower is better)
Translates to: LMGKQWTVPWTLARHSRMLLWFC*LLVDAT
Trigger: CGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAA...CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp GTAGAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTTCTGTGGCAGCCTGGTaGCCCCCGCAGAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: VEAGAIDEVDTAADHVSCSVAAW*PPQSCR
Trigger: GCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGA...ACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATGGCCCTCTCCACAGCTaGTGGGGCAAAGGCTTATGT +
Preference number: 5 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHGPLHS*WGKGLC
Trigger: ACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCC...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGGGGTTGAGGTGGGAGTaGGCCCAGGGGGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ILCYRPLHVKGRERETERGLRWE*AQGVWL
Trigger: CAACCACACCCCCTGGGCCAACTCCCACCTCAACCC...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp TGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAACGAATGCCCATCATCGTCGCTGCCGCCATCTaGGAGGGAGCTACTATTGTG +
Preference number: 5 (lower is better)
Translates to: CGTIGLASPRGAERMPIIVAAAI*EGATIV
Trigger: CACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGAC...GATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602815.5
CDS-3UTR CAA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGACCGTGCCCTGGACCTaGGCACGCCACTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: KALHESNQPILCYRPLHVTVPWT*ARHSRM
Trigger: CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGAAGAGGAGGTTGGGGTaGTGCTCCAGCAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ILCYRPLHVKGRERETERKRRLG*CSSSPG
Trigger: CCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTT...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAGTGGGCTCAAGCAGCTaGGTTTTGGCCCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPVGSSS*VLALST
Trigger: TGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCAC...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGGTTGGAGCAGCCTGGTaGGGCCTCCTTTCAAGCTGT +
Preference number: 5 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLVGAAW*GLLSSC
Trigger: ACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAAC...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCGTCGCTGCCGCCATCTaGGAGGGAGCTACTATTGTG +
Preference number: 5 (lower is better)
Translates to: YLCCVALGQVITSLDPWPVAAAI*EGATIV
Trigger: CACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGAC...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAGGAGTCTCTTGCTGGTaGACCGCGGGATACAGGCGC +
Preference number: 5 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVGVSCW*TAGYRR
Trigger: GCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCC...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCGAGCAAAAGCCGTGGCCGGCAGCGGAGTCTCTaGCTGGTTGACCGCGGGATA +
Preference number: 5 (lower is better)
Translates to: GRLFFLNRGFSHSSKSRGRQRSL*LVDRGI
Trigger: TATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCG...GCCACGGCTTTTGCTCGAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602638.5
CDS-3UTR CAA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATGTTCATGTTGACGCCTaGAGCCGAGAGTCCTATTCC +
Preference number: 5 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHVHVDA*SRESYS
Trigger: GGAATAGGACTCTCGGCTCAAGGCGTCAACATGAAC...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAAGTGCCATTGATGAGGTaGACACAGCAGCCGATCACG +
Preference number: 5 (lower is better)
Translates to: VSCGECGTIGLASPRGAEVPLMR*TQQPIT
Trigger: CGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CAA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCGTGCCATTGATGAGGTaGACACAGCAGCCGATCACG +
Preference number: 5 (lower is better)
Translates to: KMGRWPWVPSASQADTQPVPLMR*TQQPIT
Trigger: CGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATAAGAGGAGGTTGGGGTaGTGCTCCAGCAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNKRRLG*CSSSPG
Trigger: CCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTT...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGAAGAGGAGGTTGGGGTaGTGCTCCAGCAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQKRRLG*CSSSPG
Trigger: CCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTT...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCTCCTGGGCCCTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATACAAACTGCCGGCACTaGAGCATGAAGAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PPGPSQPLHNLSSGTRPHTNCRH*SMKRRL
Trigger: CAACCTCCTCTTCATGCTCAAGTGCCGGCAGTTTGT...ATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAGGGCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGACTGTCTGCTCCTGTGTaGTGCATGTGGGAACTACTG +
Preference number: 5 (lower is better)
Translates to: ADHVSCGECGTIGLASPRLSAPV*CMWELL
Trigger: CAGTAGTTCCCACATGCACAACACAGGAGCAGACAG...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGTGGACGCGACGCCATaGCTACAGCTGGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDVDATP*LQLGLS
Trigger: AGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCAC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TCCTGGGACTTGGGGCTTCGGGAGCTCAAACTTCGGACCTCACTGTCCGTCCCACTGTGGTGCTGGGACTaGGTGGAGTCTGTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SWDLGLRELKLRTSLSVPLWCWD*VESVEL
Trigger: CAACTCAACAGACTCCACCAAGTCCCAGCACCACAG...TGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGCTGTGGTGCTGGGACTaGGTGGAGTCTGTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLLWCWD*VESVEL
Trigger: CAACTCAACAGACTCCACCAAGTCCCAGCACCACAG...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGTGTGGGCCAAATTCTaGCCGTACTCCCGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDVWAKF*PYSRPN
Trigger: GTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACAC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTTCAGAGGGGGCTGCTTaGGCAGGTTCTGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: VLSTGGPPQVLATISVFPSEGAA*AGSGTL
Trigger: TAGAGTCCCAGAACCTGCCAAAGCAGCCCCCTCTGA...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCCCCACCAAACCCTATTaGGGTTTCCTAGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KMGRWPWVPSASQADTQPPTKPY*GFLGCS
Trigger: GCTGCAGCCTAGGAAACCCAAATAGGGTTTGGTGGG...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGGGTTGAGGTGGGAGTaGGCCCAGGGGGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: KALHESNQPILCYRPLHVGLRWE*AQGVWL
Trigger: CAACCACACCCCCTGGGCCAACTCCCACCTCAACCC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS GCA 90 bp TTGGAGCAGCCTGGTTGGGCCTCCTTTCAAGCTGTAGCCATGGGTTaGTGGTCTCCTGGTTACTGGTACTGCTGTGGTGCTGGGACTTGG +
Preference number: 5 (lower is better)
Translates to: LEQPGWASFQAVAMG*WSPGYWYCCGAGTW
Trigger: CCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp GTAGAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTCGGCAGCGGAGTCTCTaGCTGGTTGACCGCGGGATA +
Preference number: 5 (lower is better)
Translates to: VEAGAIDEVDTAADHVSCRQRSL*LVDRGI
Trigger: TATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCG...ACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CAA 90 bp GTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAGGAGCAGAAGTTCATGTTGACGCCTaGAGCCGAGAGTCCTATTCC +
Preference number: 5 (lower is better)
Translates to: VSCGECGTIGLASPRGAEVHVDA*SRESYS
Trigger: GGAATAGGACTCTCGGCTCAAGGCGTCAACATGAAC...TTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602815.5
CDS-3UTR CAA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGAGGAGGTTGGGGTaGTGCTCCAGCAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: KALHESNQPILCYRPLHVKRRLG*CSSSPG
Trigger: CCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTT...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGACAAACTGCCGGCACTaGAGCATGAAGAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLTNCRH*SMKRRL
Trigger: CAACCTCCTCTTCATGCTCAAGTGCCGGCAGTTTGT...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCCTGTCTGCTCCTGTGTaGTGCATGTGGGAACTACTG +
Preference number: 5 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVLSAPV*CMWELL
Trigger: CAGTAGTTCCCACATGCACAACACAGGAGCAGACAG...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGGTTCTGTTTGCTCTaGGTGGACGCGACGCCATTG +
Preference number: 5 (lower is better)
Translates to: YLCCVALGQVITSLDPWPWFCLL*VDATPL
Trigger: CAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCA...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GTAGATAGTGTGCTGGCCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCATTACTGTGGTTCTGTTaGCTCTTGGTGGACGCGACG +
Preference number: 5 (lower is better)
Translates to: VDSVLAKDPLPLLCGPGPLLWFC*LLVDAT
Trigger: CGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAA...TGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGGCCAGCACACTATCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCCTGTGGTGCTGGGACTaGGTGGAGTCTGTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: YLCCVALGQVITSLDPWPLWCWD*VESVEL
Trigger: CAACTCAACAGACTCCACCAAGTCCCAGCACCACAG...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CTCTCAGCCACTCCACAACCTAAGCTCAGGCACCCGTCCTCATCCCTGACACACCTGTGGTGCTGGGACTaGGTGGAGTCTGTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: LSATPQPKLRHPSSSLTHLWCWD*VESVEL
Trigger: CAACTCAACAGACTCCACCAAGTCCCAGCACCACAG...GTGTGTCAGGGATGAGGACGGGTGCCTGAGCTTAGGTTGTGGAGTGGCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGGTGTGGGCCAAATTCTaGCCGTACTCCCGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: ESNQPILCYRPLHVKGREVWAKF*PYSRPN
Trigger: GTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACAC...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGATCTAAAATGGCGCTGTaGAGGGCAGCACACACAGGT +
Preference number: 5 (lower is better)
Translates to: STLAKEQEPRPARAMSRRSKMAL*RAAHTG
Trigger: ACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAGA...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp GGGGGAAAGGCCAGGCAGGAGGAGTGGACTCTGTCTATGGTTTCCCAGTCCCTGTCTAAAATGGCGCTGTaGAGGGCAGCACACACAGGT +
Preference number: 5 (lower is better)
Translates to: GGKARQEEWTLSMVSQSLSKMAL*RAAHTG
Trigger: ACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAGA...CAGGGACTGGGAAACCATAGACAGAGTCCACTCCTCCTGCCTGGCCTTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTCAGAGGGGGCTGCTTaGGCAGGTTCTGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDSEGAA*AGSGTL
Trigger: TAGAGTCCCAGAACCTGCCAAAGCAGCCCCCTCTGA...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: KALHESNQPILCYRPLHVQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCTTTGCATGGGCGGCTaGTGCACTCCCCTCACAATG +
Preference number: 5 (lower is better)
Translates to: ILCYRPLHVKGRERETERLCMGG*CTPLTM
Trigger: CATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACGTTGGAGCAGCCTGGTaGGGCCTCCTTTCAAGCTGT +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDVGAAW*GLLSSC
Trigger: ACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAAC...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp TCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATGAGCCGGAGAGTGGGTTCACCTCTGTaGGACCTGGAGCAAAGAACT +
Preference number: 5 (lower is better)
Translates to: STLAKEQEPRPARAMSRRVGSPL*DLEQRT
Trigger: AGTTCTTTGCTCCAGGTCCAACAGAGGTGAACCCAC...TCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp GTCCTCTCCACAGGTGGGCCACCCCAAGTCCTGGCAACCATCTCAGTCTTTCCTGTTCATGTTGACGCCTaGAGCCGAGAGTCCTATTCC +
Preference number: 5 (lower is better)
Translates to: VLSTGGPPQVLATISVFPVHVDA*SRESYS
Trigger: GGAATAGGACTCTCGGCTCAAGGCGTCAACATGAAC...AGGAAAGACTGAGATGGTTGCCAGGACTTGGGGTGGCCCACCTGTGGAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGGTGCCATTGATGAGGTaGACACAGCAGCCGATCACG +
Preference number: 5 (lower is better)
Translates to: EVDTAADHVSCGECGTIGVPLMR*TQQPIT
Trigger: CGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC...CCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CAA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGGGCTGCTGCCCAAAGTaGGCGTCCACAATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KALHESNQPILCYRPLHVGCCPK*ASTISP
Trigger: TGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCC...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GGTGTAGAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCAGCATGAAGAGGAGGTaGGGGTTGTGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GVEAGAIDEVDTAADHVSSMKRR*GLCSSS
Trigger: GCTGCTGGAGCACAACCCCAACCTCCTCTTCATGCT...GGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp CGACGCCATTGCTACAGCTGGGACTGTCTGCTCCTGTGTTGTGCATGTGGGAACTGGTTCTGTTTGCTCTaGGTGGACGCGACGCCATTG +
Preference number: 5 (lower is better)
Translates to: RRHCYSWDCLLLCCACGNWFCLL*VDATPL
Trigger: CAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCA...GTTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp CATGGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGGTGTGGGCCAAATTCTaGCCGTACTCCCGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: HGLWVCQPQGPRKSSSYRVWAKF*PYSRPN
Trigger: GTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACAC...CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCGCATGTAGTCCTCAATGTCAAACAGGAAGGGCTGCTGCCCAAAGTTGGCGTCTCAGAGGGGGCTGCTTaGGCAGGTTCTGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: PHVVLNVKQEGLLPKVGVSEGAA*AGSGTL
Trigger: TAGAGTCCCAGAACCTGCCAAAGCAGCCCCCTCTGA...GACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp ATTTACTGTGGTTCTGTTTGCTCTTGGTGGACGCGACGCCATTGCTACAGCTGGCAGTCCCTGCACCAGTaGCCTATGGAGGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: IYCGSVCSWWTRRHCYSWQSLHQ*PMEGRA
Trigger: TGCCCTGCCCTCCATAGGCAACTGGTGCAGGGACTG...CCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCCCACCAAACCCTATTaGGGTTTCCTAGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDPTKPY*GFLGCS
Trigger: GCTGCAGCCTAGGAAACCCAAATAGGGTTTGGTGGG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTTCCGGCGGCCCTCTCCACAGCTaGTGGGGCAAAGGCTTATGT +
Preference number: 5 (lower is better)
Translates to: AGACKAQIQAGTESSTSGGPLHS*WGKGLC
Trigger: ACATAAGCCTTTGCCCCACAAGCTGTGGAGAGGGCC...GCCGGAAGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACAGCTGTAGCCATGGGTaGCTGGTCTCCTGGTTACTG +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDSCSHG*LVSWLL
Trigger: CAGTAACCAGGAGACCAGCAACCCATGGCTACAGCT...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CCA 90 bp GCCTCCTTTCAAGCTGTAGCCATGGGTTGCTGGTCTCCTGGTTACTaGTACTGCTGTGGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: ASFQAVAMGCWSPGY*YCCGAGTWWSLLSW
Trigger: CCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATGGCTACAGCTTGAAAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CCA 90 bp TGGTTGGGCCTCCTTTCAAGCTGTAGCCATGGGTTGCTGGTCTCCTaGTTACTGGTACTGCTGTGGTGCTGGGACTTGGTGGAGTCTGTT +
Preference number: 5 (lower is better)
Translates to: WLGLLSSCSHGLLVS*LLVLLWCWDLVESV
Trigger: AACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTCGGCAGCGGAGTCTCTaGCTGGTTGACCGCGGGATA +
Preference number: 5 (lower is better)
Translates to: YGAGACKAQIQAGTESSTRQRSL*LVDRGI
Trigger: TATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCG...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTGTGCCATTGATGAGGTaGACACAGCAGCCGATCACG +
Preference number: 5 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSVPLMR*TQQPIT
Trigger: CGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GAAGCAGGTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGTGCCATTGATGAGGTaGACACAGCAGCCGATCACG +
Preference number: 5 (lower is better)
Translates to: EAGAIDEVDTAADHVSCGVPLMR*TQQPIT
Trigger: CGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC...ACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000602506.5
ENST00000602638.5
ENST00000602815.5
CDS-3UTR CAA 90 bp GCATGGGCGGCTTGTGCACTCCCCTCACAATGTGAAGCACATATGGAAATTCCAGGCTGCTGCCCAAAGTaGGCGTCCACAATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: AWAACALPSQCEAHMEIPGCCPK*ASTISP
Trigger: TGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCC...TGGAATTTCCATATGTGCTTCACATTGTGAGGGGAGTGCACAAGCCGCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp ACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTACAAACTGCCGGCACTaGAGCATGAAGAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TLYLCCVALGQVITSLDPTNCRH*SMKRRL
Trigger: CAACCTCCTCTTCATGCTCAAGTGCCGGCAGTTTGT...AGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp ATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACTGAGCGGCTGTCTGCTCCTGTGTaGTGCATGTGGGAACTACTG +
Preference number: 5 (lower is better)
Translates to: ILCYRPLHVKGRERETERLSAPV*CMWELL
Trigger: CAGTAGTTCCCACATGCACAACACAGGAGCAGACAG...CCGCTCAGTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CATGGTCTATGGGTCTGCCAGCCCCAAGGACCAAGAAAAAGCAGCAGCTATAGGGTGGGCTCAAGCAGCTaGGTTTTGGCCCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: HGLWVCQPQGPRKSSSYRVGSSS*VLALST
Trigger: TGTGGAGAGGGCCAAAACCAAGCTGCTTGAGCCCAC...CCTATAGCTGCTGCTTTTTCTTGGTCCTTGGGGCTGGCAGACCCATAGACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS GCA 90 bp TTTCAAGCTGTAGCCATGGGTTGCTGGTCTCCTGGTTACTGGTACTaGTGTGGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGGACTCGG +
Preference number: 5 (lower is better)
Translates to: FQAVAMGCWSPGYWY*CGAGTWWSLLSWTR
Trigger: CCGAGTCCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATGGCTACAGCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGGAGTCTCTTGCTGGTaGACCGCGGGATACAGGCGC +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKGVSCW*TAGYRR
Trigger: GCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACGGCAGCGGAGTCTCTaGCTGGTTGACCGCGGGATA +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKRQRSL*LVDRGI
Trigger: TATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGCGGCAGCGGAGTCTCTaGCTGGTTGACCGCGGGATA +
Preference number: 5 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQRQRSL*LVDRGI
Trigger: TATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCG...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGGTGCCATTGATGAGGTaGACACAGCAGCCGATCACG +
Preference number: 5 (lower is better)
Translates to: LHESNQPILCYRPLHVKGVPLMR*TQQPIT
Trigger: CGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGACAAACTGCCGGCACTaGAGCATGAAGAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: ESNQPILCYRPLHVKGRETNCRH*SMKRRL
Trigger: CAACCTCCTCTTCATGCTCAAGTGCCGGCAGTTTGT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CAAGTAGTCATCAACTCTGGCAAAGGAGCAAGAACCCAGGCCTGCTCGGGCCATACAAACTGCCGGCACTaGAGCATGAAGAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QVVINSGKGARTQACSGHTNCRH*SMKRRL
Trigger: CAACCTCCTCTTCATGCTCAAGTGCCGGCAGTTTGT...ATGGCCCGAGCAGGCCTGGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCTGTCTGCTCCTGTGTaGTGCATGTGGGAACTACTG +
Preference number: 5 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQLSAPV*CMWELL
Trigger: CAGTAGTTCCCACATGCACAACACAGGAGCAGACAG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTGGTTCTGTTTGCTCTaGGTGGACGCGACGCCATTG +
Preference number: 5 (lower is better)
Translates to: LHESNQPILCYRPLHVKGWFCLL*VDATPL
Trigger: CAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCACTTGGTGGAGTCTGTaGAGTTGGACTCGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: YLCCVALGQVITSLDPWPTWWSL*SWTRSN
Trigger: ATTACTCCGAGTCCAACTCAACAGACTCCACCAAGT...GGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATCTGTGGCAGCCTGGTaGCCCCCGCAGAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SPTWIGFITKLAETSSAQSVAAW*PPQSCR
Trigger: GCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGTTCAACTTCCGGCCTaGCCATGGCTGACCCTACTC +
Preference number: 5 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRVQLPA*PWLTLL
Trigger: GAGTAGGGTCAGCCATGGCAAGGCCGGAAGTTGAAC...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAAGGACCCTCTACCTCTGCTGTGTGGCCCTGGGCCAAGTTATCACTTCTCTGCAAACATTTTTCTTGTaGCCCAGCTGTGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: PRTLYLCCVALGQVITSLQTFFL*PSCGPS
Trigger: ACTGGGCCCACAGCTGGGCAACAAGAAAAATGTTTG...CAGAGAAGTGATAACTTGGCCCAGGGCCACACAGCAGAGGTAGAGGGTCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGAGAGAGACCAAACATTTTTCTTGTaGCCCAGCTGTGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: PANTVLQAAAREGERERDQTFFL*PSCGPS
Trigger: ACTGGGCCCACAGCTGGGCAACAAGAAAAATGTTTG...GTCTCTCTCTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AAAATGGGGAGGTGGCCATGGGTACCAAGTGCGAGCCAGGCAGACACCCAACCCCCCCATCACCAGCAGTaGGTCCAATTCAAACATTTT +
Preference number: 5 (lower is better)
Translates to: KMGRWPWVPSASQADTQPPHHQQ*VQFKHF
Trigger: AAAATGTTTGAATTGGACCAACTGCTGGTGATGGGG...GGGTTGGGTGTCTGCCTGGCTCGCACTTGGTACCCATGGCCACCTCCCCATTTT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GGCCTTGCCATGGCTGACCCTACTCTTTGCATGGGCGGCTTGTGCACTCCCCTCGGCTCTGCTACTAATTaGCTATGTGACTTTAGCCAA +
Preference number: 5 (lower is better)
Translates to: GLAMADPTLCMGGLCTPLGSATN*LCDFSQ
Trigger: TTGGCTAAAGTCACATAGCAAATTAGTAGCAGAGCC...GAGGGGAGTGCACAAGCCGCCCATGCAAAGAGTAGGGTCAGCCATGGCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGACTCGTGGTGTCCATTTaGATGGCCTGCACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRLVVSI*MACTQP
Trigger: TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAG...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GTGCCATTGATGAGGTTGACACAGCAGCCGATCACGTCTCCTGTGGTGAATGTGGTTCATGTTGACGCCTaGAGCCGAGAGTCCTATTCC +
Preference number: 5 (lower is better)
Translates to: VPLMRLTQQPITSPVVNVVHVDA*SRESYS
Trigger: GGAATAGGACTCTCGGCTCAAGGCGTCAACATGAAC...CACATTCACCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602506.5
ENST00000602815.5
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGGCTGCTGCCCAAAGTaGGCGTCCACAATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKGCCPK*ASTISP
Trigger: TGGGGAGATTGTGGACGCCAACTTTGGGCAGCAGCC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCACCGTGCCCTGGACCTaGGCACGCCACTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGTVPWT*ARHSRM
Trigger: CATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CGAGGTAAGATGAAACCATGTTCTGCAGCACTGCCTGCCACTCGCCAAGCCGGGCAGCTTCTGGATCTTTaGTCTGTTCTTTATGGACGC +
Preference number: 5 (lower is better)
Translates to: RGKMKPCSAALPATRQAGQLLDL*SVLYGR
Trigger: GCGTCCATAAAGAACAGACAAAAGATCCAGAAGCTG...CCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATCTTACCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTAGCATGAAGAGGAGGTaGGGGTTGTGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: YGAGACKAQIQAGTESSTSMKRR*GLCSSS
Trigger: GCTGCTGGAGCACAACCCCAACCTCCTCTTCATGCT...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGTGGACGCGACGCCATaGCTACAGCTGGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKVDATP*LQLGLS
Trigger: AGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCAC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTTACTGTGGTTCTGTTaGCTCTTGGTGGACGCGACG +
Preference number: 5 (lower is better)
Translates to: LHESNQPILCYRPLHVKGLLWFC*LLVDAT
Trigger: CGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp AGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATGGAGTACTTGGTGGAGTCTGTaGAGTTGGACTCGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: RQEESSPCTQGPLSWEWSTWWSL*SWTRSN
Trigger: ATTACTCCGAGTCCAACTCAACAGACTCCACCAAGT...ACTCCATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GCTTGCTTAAGGAGTGGGAAGGCGCTAGGTGGCCAGGCAGTCCCCACTTCTGTCAGGGATCTACAGTTCTaGGGATGCTATAAACCAATG +
Preference number: 5 (lower is better)
Translates to: ACLRSGKALGGQAVPTSVRDLQF*GCYKPM
Trigger: CATTGGTTTATAGCATCCCAAGAACTGTAGATCCCT...GACAGAAGTGGGGACTGCCTGGCCACCTAGCGCCTTCCCACTCCTTAAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TATGGAGCAGGAGCTTGCAAAGCCCAGATTCAGGCAGGGACTGAAAGTTCAACTCTTTGCATGGGCGGCTaGTGCACTCCCCTCACAATG +
Preference number: 5 (lower is better)
Translates to: YGAGACKAQIQAGTESSTLCMGG*CTPLTM
Trigger: CATTGTGAGGGGAGTGCACAAGCCGCCCATGCAAAG...AGTTGAACTTTCAGTCCCTGCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCTGGTGAGCAATGGGTATCTCAGGCCACACCAACCATTCCCATGTCCACCAATTCAAGCAGCTTGGTTTaGGCCCTCTCCACAGCTTGT +
Preference number: 5 (lower is better)
Translates to: PGEQWVSQATPTIPMSTNSSSLV*ALSTAC
Trigger: ACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGA...ATTGGTGGACATGGGAATGGTTGGTGTGGCCTGAGATACCCATTGCTCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCCTCGTGGTGTCCATTTaGATGGCCTGCACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GGTCVKLIESHSLASKYSLVVSI*MACTQP
Trigger: TGGCTGGGTGCAGGCCATCAAAATGGACACCACGAG...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGTCGCTGCCGCCATCTaGGAGGGAGCTACTATTGTG +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKVAAAI*EGATIV
Trigger: CACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGAC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAAGCATGAAGAGGAGGTaGGGGTTGTGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSMKRR*GLCSSS
Trigger: GCTGCTGGAGCACAACCCCAACCTCCTCTTCATGCT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGAGAGAGACTTGGTGGAGTCTGTaGAGTTGGACTCGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: ESNQPILCYRPLHVKGRETWWSL*SWTRSN
Trigger: ATTACTCCGAGTCCAACTCAACAGACTCCACCAAGT...CTCTCTCCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp AACAGTGAGATAAGGCACAGAAAATGGGGAGGTGGCCATGGGTACCAAGTGCGATCTAAAATGGCGCTGTaGAGGGCAGCACACACAGGT +
Preference number: 5 (lower is better)
Translates to: NSEIRHRKWGGGHGYQVRSKMAL*RAAHTG
Trigger: ACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAGA...TCGCACTTGGTACCCATGGCCACCTCCCCATTTTCTGTGCCTTATCTCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GAACCTGCCTCCACAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGTCAGAGGGGGCTGCTTaGGCAGGTTCTGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: EPASTRYWFLNRKHPFSQSEGAA*AGSGTL
Trigger: TAGAGTCCCAGAACCTGCCAAAGCAGCCCCCTCTGA...CTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTGTGGAGGCAGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATCAGAGGGGGCTGCTTaGGCAGGTTCTGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSEGAA*AGSGTL
Trigger: TAGAGTCCCAGAACCTGCCAAAGCAGCCCCCTCTGA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GCCGATCACGTCTCCTGTGGTGAATGTGGGACCATAGGGCTGGCCAGTCCCCGAAGAATAAACCTTACTTaGTCTGTTCTTTATGGACGC +
Preference number: 5 (lower is better)
Translates to: ADHVSCGECGTIGLASPRRINLT*SVLYGR
Trigger: GCGTCCATAAAGAACAGACAAAGTAAGGTTTATTCT...TCGGGGACTGGCCAGCCCTATGGTCCCACATTCACCACAGGAGACGTGATCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGGAGTCTCTTGCTGGTaGACCGCGGGATACAGGCGC +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGGVSCW*TAGYRR
Trigger: GCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GATCTAGGCAGGAAGAAAGCAGCCCCTGTACTCAAGGGCCTCTGTCCTGGGAATCAGCTTCTGGATCTTTaGTCTGTTCTTTATGGACGC +
Preference number: 5 (lower is better)
Translates to: DLGRKKAAPVLKGLCPGNQLLDL*SVLYGR
Trigger: GCGTCCATAAAGAACAGACAAAAGATCCAGAAGCTG...ATTCCCAGGACAGAGGCCCTTGAGTACAGGGGCTGCTTTCTTCCTGCCTAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGAGTTCAACTTCCGGCCTaGCCATGGCTGACCCTACTC +
Preference number: 5 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRVQLPA*PWLTLL
Trigger: GAGTAGGGTCAGCCATGGCAAGGCCGGAAGTTGAAC...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TGGAGGGCACATCAGCCTGACCCCTCATGGGGTTTATCTGCCATTCGGTTTCAGCCCCATCACCAGCAGTaGGTCCAATTCAAACATTTT +
Preference number: 5 (lower is better)
Translates to: WRAHQPDPSWGLSAIRFQPHHQQ*VQFKHF
Trigger: AAAATGTTTGAATTGGACCAACTGCTGGTGATGGGG...CTGAAACCGAATGGCAGATAAACCCCATGAGGGGTCAGGCTGATGTGCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGAAGGGGTCATCTTCTTTGTGCTaGCTTAAGGAGTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LHESNQPILCYRPLHVKGSSSLC*LKEWEG
Trigger: GCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGA...CCCCTTCACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGTCTGCCTCATCTTCTTaGTGCTTGCTTAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: KALHESNQPILCYRPLHVSASSS*CLLKEW
Trigger: CCACTCCTTAAGCAAGCACAAAGAAGATGAGGCAGA...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp AGGATTCCATCCACTCCCTGGAGTAGCAGCCCAAGAACCTGCCTCCACAAGGTAGCCAAGTATCAACTCTaGAGGACAAAGGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: RIPSTPWSSSPRTCLHKVAKYQL*RTKAKP
Trigger: TGGTTTTGCCTTTGTCCTCAAGAGTTGATACTTGGC...TACCTTGTGGAGGCAGGTTCTTGGGCTGCTACTCCAGGGAGTGGATGGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS CCA 90 bp TGGCTAGGAATAAGCAGAACTACTAAGGCAGGCAAACAGCCTTCCTaGAAGACCATGAACAGGAGGTTGAGAGGAATCCAGGATTCAGGG +
Preference number: 5 (lower is better)
Translates to: WLGISRTTKAGKQPS*KTMNRRLRGIQDSG
Trigger: CCCTGAATCCTGGATTCCTCTCAACCTCCTGTTCATGGTCTTCCAGGAAGGCTGTTTGCCTGCCTTAGTAGTTCTGCTTATTCCTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602525.5
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAGTTCATGTTGACGCCTaGAGCCGAGAGTCCTATTCC +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKVHVDA*SRESYS
Trigger: GGAATAGGACTCTCGGCTCAAGGCGTCAACATGAAC...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp AAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCCGCTGCACGTGCAGCTTCTGGATCTTTaGTCTGTTCTTTATGGACGC +
Preference number: 5 (lower is better)
Translates to: KALHESNQPILCYRPLHVQLLDL*SVLYGR
Trigger: GCGTCCATAAAGAACAGACAAAAGATCCAGAAGCTG...CACGTGCAGCGGCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGTGGACGCGACGCCATaGCTACAGCTGGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGVDATP*LQLGLS
Trigger: AGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCAC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAGTGGACGCGACGCCATaGCTACAGCTGGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: SPTWIGFITKLAETSSAQVDATP*LQLGLS
Trigger: AGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCAC...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GATGAGGAGCTGGGTGCAGGGTATTTACTGTGGTTCTGTTTGCTCTTGGTGGACACTTGGTGGAGTCTGTaGAGTTGGACTCGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: DEELGAGYLLWFCLLLVDTWWSL*SWTRSN
Trigger: ATTACTCCGAGTCCAACTCAACAGACTCCACCAAGT...GTCCACCAAGAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTGTGTGGGCCAAATTCTaGCCGTACTCCCGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: PTWIGFITKLAETSSAQTVWAKF*PYSRPN
Trigger: GTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACAC...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAATCTAAAATGGCGCTGTaGAGGGCAGCACACACAGGT +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKSKMAL*RAAHTG
Trigger: ACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAGA...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCCTGGGCCAAGTTATCACTTCTCTGGACCCTTGGCCCTGTAGTTCTCTGCTCTAGGGATCTACAGTTCTaGGGATGCTATAAACCAATG +
Preference number: 5 (lower is better)
Translates to: PWAKLSLLWTLGPVVLCSRDLQF*GCYKPM
Trigger: CATTGGTTTATAGCATCCCAAGAACTGTAGATCCCT...AGAGCAGAGAACTACAGGGCCAAGGGTCCAGAGAAGTGATAACTTGGCCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAAATATGGAGCAGGAGCTaGCAAAGCCCAGATTCAGGC +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKIWSRS*QSPDSG
Trigger: GCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATAT...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATGGAGGGAGCTACTATaGTGTCACTGGGGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: SPTWIGFITKLAETSSAQWRELL*CHWGRG
Trigger: TCCCCGCCCCCAGTGACACAATAGTAGCTCCCTCCA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGTCGCTGCCGCCATCTaGGAGGGAGCTACTATTGTG +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGVAAAI*EGATIV
Trigger: CACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGAC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAAGCATGAAGAGGAGGTaGGGGTTGTGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SPTWIGFITKLAETSSAQSMKRR*GLCSSS
Trigger: GCTGCTGGAGCACAACCCCAACCTCCTCTTCATGCT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCTCATCTTCTTTGTGCTaGCTTAAGGAGTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GGTCVKLIESHSLASKYSSSSLC*LKEWEG
Trigger: GCCTTCCCACTCCTTAAGCAAGCACAAAGAAGATGA...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp GGTGGGACATGTGTAAAGCTGATAGAGTCCCATTCTCTGGCCAGCAAATACTCCTCTGCCTCATCTTCTTaGTGCTTGCTTAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GGTCVKLIESHSLASKYSSASSS*CLLKEW
Trigger: CCACTCCTTAAGCAAGCACAAAGAAGATGAGGCAGA...GGAGTATTTGCTGGCCAGAGAATGGGACTCTATCAGCTTTACACATGTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTGGTTCTGTTTGCTCTaGGTGGACGCGACGCCATTG +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGWFCLL*VDATPL
Trigger: CAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAATGGTTCTGTTTGCTCTaGGTGGACGCGACGCCATTG +
Preference number: 5 (lower is better)
Translates to: SPTWIGFITKLAETSSAQWFCLL*VDATPL
Trigger: CAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCA...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCTGTGGTGCTGGGACTaGGTGGAGTCTGTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: PTWIGFITKLAETSSAQTLWCWD*VESVEL
Trigger: CAACTCAACAGACTCCACCAAGTCCCAGCACCACAG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCAGCTGTAGCCATGGGTaGCTGGTCTCCTGGTTACTG +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGSCSHG*LVSWLL
Trigger: CAGTAACCAGGAGACCAGCAACCCATGGCTACAGCT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTGTTCATGTTGACGCCTaGAGCCGAGAGTCCTATTCC +
Preference number: 5 (lower is better)
Translates to: PTWIGFITKLAETSSAQTVHVDA*SRESYS
Trigger: GGAATAGGACTCTCGGCTCAAGGCGTCAACATGAAC...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAGCTCAGCACAAACTCTCCAGAGATAAATACTGGTGGCTCAGTCAGGAGAAACAGCTTCTGGATCTTTaGTCTGTTCTTTATGGACGC +
Preference number: 5 (lower is better)
Translates to: PAQHKLSRDKYWWLSQEKQLLDL*SVLYGR
Trigger: GCGTCCATAAAGAACAGACAAAAGATCCAGAAGCTG...TTTCTCCTGACTGAGCCACCAGTATTTATCTCTGGAGAGTTTGTGCTGAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTCTGTCTGCTCCTGTGTaGTGCATGTGGGAACTACTG +
Preference number: 5 (lower is better)
Translates to: PTWIGFITKLAETSSAQTLSAPV*CMWELL
Trigger: CAGTAGTTCCCACATGCACAACACAGGAGCAGACAG...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTTACTGTGGTTCTGTTaGCTCTTGGTGGACGCGACG +
Preference number: 5 (lower is better)
Translates to: PTWIGFITKLAETSSAQTLLWFC*LLVDAT
Trigger: CGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCTTACTGTGGTTCTGTTaGCTCTTGGTGGACGCGACG +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGLLWFC*LLVDAT
Trigger: CGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAA...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602677.5
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTCTAAAATGGCGCTGTaGAGGGCAGCACACACAGGT +
Preference number: 5 (lower is better)
Translates to: PTWIGFITKLAETSSAQTSKMAL*RAAHTG
Trigger: ACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAGA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCATATGGAGCAGGAGCTaGCAAAGCCCAGATTCAGGC +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGIWSRS*QSPDSG
Trigger: GCCTGAATCTGGGCTTTGCAAGCTCCTGCTCCATAT...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTCAAGCAGCTTGGTTTaGGCCCTCTCCACAGCTTGT +
Preference number: 5 (lower is better)
Translates to: PTWIGFITKLAETSSAQTSSSLV*ALSTAC
Trigger: ACAAGCTGTGGAGAGGGCCAAAACCAAGCTGCTTGA...AGTTTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGACAGCTTCTGGATCTTTaGTCTGTTCTTTATGGACGC +
Preference number: 5 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRQLLDL*SVLYGR
Trigger: GCGTCCATAAAGAACAGACAAAAGATCCAGAAGCTG...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp CAAGGTACTGGTTTCTCAACAGAAAGCATCCATTCTCTCAGAGCTGTGCAGAGAGCCAAGTATCAACTCTaGAGGACAAAGGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: QGTGFSTESIHSLRAVQRAKYQL*RTKAKP
Trigger: TGGTTTTGCCTTTGTCCTCAAGAGTTGATACTTGGC...TCTCTGCACAGCTCTGAGAGAATGGATGCTTTCTGTTGAGAAACCAGTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTGTCTGTTCTTTATGGACGCCTGTTCTTCCTGAATCGGGGTTTCAGTCATTCACCATGAACAGGAGGTaGAGAGGAATCCAGGATTCA +
Preference number: 5 (lower is better)
Translates to: FVCSLWTPVLPESGFQSFTMNRR*RGIQDS
Trigger: TGAATCCTGGATTCCTCTCAACCTCCTGTTCATGGT...GAATGACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602638.5
CDS-3UTR CAA 90 bp TCACCAACTTGGATAGGCTTCATCACTAAATTAGCAGAAACCAGCTCAGCACAAACTTGGTGGAGTCTGTaGAGTTGGACTCGGAGTAAT +
Preference number: 5 (lower is better)
Translates to: SPTWIGFITKLAETSSAQTWWSL*SWTRSN
Trigger: ATTACTCCGAGTCCAACTCAACAGACTCCACCAAGT...TTGTGCTGAGCTGGTTTCTGCTAATTTAGTGATGAAGCCTATCCAAGTTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000630626.2
CDS-3UTR CAA 90 bp TTTCAAAATAGAAGGCGCTACATGAGAGTAACCAGCCAATACTGTGTTACAGGCGGCTCTGCTACTAATTaGCTATGTGACTTTAGCCAA +
Preference number: 5 (lower is better)
Translates to: FQNRRRYMRVTSQYCVTGGSATN*LCDFSQ
Trigger: TTGGCTAAAGTCACATAGCAAATTAGTAGCAGAGCC...GCCTGTAACACAGTATTGGCTGGTTACTCTCATGTAGCGCCTTCTATTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317506.8
ENST00000630626.2
CDS TCA 72 bp GGCTCCAGGAGCGCGGCAGCGGAGTCTCTTGCTGGTTaGCCGCGGGATACAGGCGCTGCAAGCGCCGGCTCA +
Preference number: 6 (lower is better)
Translates to: GSRSAAAESLAG*PRDTGAASAGS
Trigger: TGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCCGCTGCCGCGCTCCTGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602525.5
ENST00000602638.5
ENST00000602677.5
ENST00000602815.5
ENST00000602887.1
ENST00000630626.2
CDS CAA 90 bp GTTGAGGTGGGAGTTGGCCCAGGGGGTGTGGTTGGAGCAGCCTGGTaGGGCCTCCTTTCAAGCTGTAGCCATGGGTTGCTGGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VEVGVGPGGVVGAAW*GLLSSCSHGLLVSW
Trigger: CCAGGAGACCAGCAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAACTCCCACCTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CCA 72 bp GAGTTGGCCCAGGGGGTGTGGTTGGAGCAGCCTGGTTaGGCCTCCTTTCAAGCTGTAGCCATGGGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: ELAQGVWLEQPG*ASFQAVAMGCW
Trigger: CCAGCAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CCA 72 bp GTGGGAGTTGGCCCAGGGGGTGTGGTTGGAGCAGCCTaGTTGGGCCTCCTTTCAAGCTGTAGCCATGGGTTG +
Preference number: 6 (lower is better)
Translates to: VGVGPGGVVGAA*LGLLSSCSHGL
Trigger: CAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAACTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CAA 72 bp GGAGTTGGCCCAGGGGGTGTGGTTGGAGCAGCCTGGTaGGGCCTCCTTTCAAGCTGTAGCCATGGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: GVGPGGVVGAAW*GLLSSCSHGLL
Trigger: CAGCAACCCATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CCA 72 bp CAAGCTGTAGCCATGGGTTGCTGGTCTCCTGGTTACTaGTACTGCTGTGGTGCTGGGACTTGGTGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: QAVAMGCWSPGY*YCCGAGTWWSL
Trigger: CAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATGGCTACAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS GCA 72 bp GTAGCCATGGGTTGCTGGTCTCCTGGTTACTGGTACTaGTGTGGTGCTGGGACTTGGTGGAGTCTGTTGAGT +
Preference number: 6 (lower is better)
Translates to: VAMGCWSPGYWY*CGAGTWWSLLS
Trigger: ACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS GCA 72 bp CTACGGTGGGGTAGAGGTTGGCTCCAAGGTCCCTTATaGACACACCAAGGCTGTGGCCATTCTTGGTGTAGA +
Preference number: 6 (lower is better)
Translates to: LRWGRGWLQGPL*THQGCGHSWCR
Trigger: TCTACACCAAGAATGGCCACAGCCTTGGTGTGTGCATAAGGGACCTTGGAGCCAACCTCTACCCCACCGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630626.2
CDS CCA 72 bp CATGGGTTGCTGGTCTCCTGGTTACTGGTACTGCTGTaGTGCTGGGACTTGGTGGAGTCTGTTGAGTTGGAC +
Preference number: 6 (lower is better)
Translates to: HGLLVSWLLVLL*CWDLVESVELD
Trigger: GTCCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CCA 72 bp CTCCTTTCAAGCTGTAGCCATGGGTTGCTGGTCTCCTaGTTACTGGTACTGCTGTGGTGCTGGGACTTGGTG +
Preference number: 6 (lower is better)
Translates to: LLSSCSHGLLVS*LLVLLWCWDLV
Trigger: CACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCCATGGCTACAGCTTGAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448631.6
ENST00000602677.5
CDS CCA 72 bp AGTAATAAATGCCACAGGCAGCAGGTATGGGGTGGGTaGCACGCACTGAGGCCGCATCTTTGTGATTTTTGC +
Preference number: 6 (lower is better)
Translates to: SNKCHRQQVWGG*HALRPHLCDFC
Trigger: GCAAAAATCACAAAGATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTGGCATTTATTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317506.8
ENST00000448631.6
ENST00000602506.5
ENST00000602525.5
ENST00000602638.5
ENST00000602677.5
ENST00000602887.1
ENST00000630626.2
CDS CCA 72 bp ATAACCCCAGTCTGGGGCAAGTGGGTTCACCTCTGTTaGACCTGGAGCAAAGAACTCAGGTTTCTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: ITPVWGKWVHLC*TWSKELRFLEV
Trigger: CACTTCCAGAAACCTGAGTTCTTTGCTCCAGGTCCAACAGAGGTGAACCCACTTGCCCCAGACTGGGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5
CDS CAA 72 bp AATAACCCCAGTCTGGGGCAAGTGGGTTCACCTCTGTaGGACCTGGAGCAAAGAACTCAGGTTTCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: NNPSLGQVGSPL*DLEQRTQVSGS
Trigger: ACTTCCAGAAACCTGAGTTCTTTGCTCCAGGTCCAACAGAGGTGAACCCACTTGCCCCAGACTGGGGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602506.5