Pregenerated sensors for RANBP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000099901Ensembl transcript IDs: ENST00000416427.5, ENST00000418705.2, ENST00000430524.6, ENST00000432879.5, ENST00000435265.5, ENST00000467920.1, ENST00000486575.1, ENST00000488484.1
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTGCTTCGCTGCGGGCCTaGTCTGAGTTCAGAGGCACG | + |
|
Preference number: 2 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRASLRA*SEFRGT Trigger: CGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGC...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTGCTGCGGGCCTGCTCTaGGTTCAGAGGCACGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRAAGLL*VQRHVV Trigger: TACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGC...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGCCCAGCCTGGGCGCTaGGTCCTCCCATCAGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: EKTEARCIQAHGPRQAGPAQPGR*VLPSGP Trigger: GGGCCCTGATGGGAGGACGCAGCGCCCAGGCTGGGC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGGACAGACTCCTGCCTaGCCAAGCCGCCTCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EKTEARCIQAHGPRQAGPGQTPA*PSRLLE Trigger: CTCCAGGAGGCGGCTTGGCCAGGCAGGAGTCTGTCC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCTGCTCTAAGCTTCGCTaGGGGCCTGCTCTGAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: EKTEARCIQAHGPRQAGPCSKLR*GPALSS Trigger: TGAACTCAGAGCAGGCCCGCAGCGAAGCTTAGAGCA...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCAGGAAGCCAGGTGGATaGACTCAAGCACTGCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: EKTEARCIQAHGPRQAGPRKPGG*TQALPR Trigger: TCTAGGCAGTGCTTGAGTGCATCCACCTGGCTTCCT...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR CCA 72 bp | TCCATCATCGGCGTGATCCTCGTCCCGAGCCCAGCCTaGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SIIGVILVPSPA*ALRPPIRARLA Trigger: AGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGGCTGGGCTCGGGACGAGGATCACGCCGATGATGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR CCA 72 bp | AGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTaGTCCCAAGTGCCGTCACCCACCCACAGCGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: STVHSSTWPSPG*SQVPSPTHSGL Trigger: CAAGCCGCTGTGGGTGGGTGACGGCACTTGGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR TCA 72 bp | CCCCCGTGTGCTCTAAGCTTCGCTGCGGGCCTGCTCTaGGTTCAGAGGCACGTTGTAGTGGTTGGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PPCALSFAAGLL*VQRHVVVVGTD Trigger: ATCTGTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTTAGAGCACACGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| 3UTR GCA 72 bp | AAACACAAGCAGCACAGTGAGAAAACAGAAGCACGGTaGATTCAAGCACATGGCCCTCGCCAGGCTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KHKQHSEKTEAR*IQAHGPRQAGP Trigger: GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTCACTGTGCTGCTTGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTCCATCAGGGCCCGTCTaGCTGACTCCACACCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRPSGPV*LTPHPR Trigger: ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGG...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTGGACAGACTCCTGCCTaGCCAAGCCGCCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRGQTPA*PSRLLE Trigger: CTCCAGGAGGCGGCTTGGCCAGGCAGGAGTCTGTCC...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTCACCCTGCGCCTTTGTaGCATTCCGCAGCGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRHPAPL*HSAALQ Trigger: CTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTG...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTGAGTGGCCGACGTGGTaGCCCCTCTATGGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPREWPTW*PLYGQC Trigger: GCACTGTCCATAGAGGGGTCACCACGTCGGCCACTC...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTAGAGGGACAAGGCCCTaGGCGTTTTGCATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRRGTRP*AFCMVP Trigger: GGGCACCATGCAAAACGCGCAGGGCCTTGTCCCTCT...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTGTGCATTCAAGCACATaGCCCTCGCCAGGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRVHSST*PSPGWS Trigger: GGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCAC...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTCAGAAACTTGCCAAGTaGGTGTGGGCGCAAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRQKLAK*VWAQDA Trigger: GGCGTCTTGCGCCCACACTCACTTGGCAAGTTTCTG...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTAGGCCCTGCGCGTTTTaGATGGTGCCCTCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRRPCAF*MVPSGK Trigger: CTTTCCAGAGGGCACCATGCAAAACGCGCAGGGCCT...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTTTGCATGGTGCCCTCTaGAAAGGCCGCCCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRLHGAL*KGRPLS Trigger: ACTGAGTGGGCGGCCTTTCCAGAGGGCACCATGCAA...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACGCCGCCCACTCAGTGTaGGCCTGGCCCGGCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHAAHSV*AWPGPR Trigger: CCTTGGGCCGGGCCAGGCGCACACTGAGTGGGCGGC...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTCCCCTCTATGGACAGTaGCCTATGCTGAGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRPLYGQ*PMLSSL Trigger: CAAGCTGCTCAGCATAGGGCACTGTCCATAGAGGGG...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACGCCCAGCCTGGGCGCTaGGTCCTCCCATCAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHAQPGR*VLPSGP Trigger: GGGCCCTGATGGGAGGACGCAGCGCCCAGGCTGGGC...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCCAGGGCCCGTCTGGCTaGCTCCACACCCCCGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPQGPSG*LHTPVC Trigger: GCACACGGGGGTGTGGAGTCAGCCAGACGGGCCCTG...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTTGGAGTGCGAGCAGGTaGTGCAGAAACTTGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRWSASR*CRNLPS Trigger: ACTTGGCAAGTTTCTGCAGCACCTGCTCGCACTCCA...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACCACTCAGTGTGCGCCTaGCCCGGCCCAAGGCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHHSVCA*PGPRPT Trigger: GGTCGGCCTTGGGCCGGGCCAGGCGCACACTGAGTG...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGCAAGACGCCCCTCTTaGCCAGGGCTCTGCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPARRPS*PGLCPA Trigger: GGCCGGGCAGAGCCCTGGCCAAGAGGGGCGTCTTGC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGTCCCGAGCCCAGCCTaGGCGCTGCGTCCTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPVPSPA*ALRPPI Trigger: GATGGGAGGACGCAGCGCCCAGGCTGGGCTCGGGAC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCCCACCCACAGCGGCTTaGCCGCCCTCGGGACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPPPTAA*PPSGQT Trigger: AGTCTGTCCCGAGGGCGGGCAAGCCGCTGTGGGTGG...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTCAAAACCAAACTCTTTaGGCAACCACCCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRQNQTL*ATTLRL Trigger: AAGGCGCAGGGTGGTTGCCCAAAGAGTTTGGTTTTG...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCTGGCCCTCGCCAGGCTaGTCCCAAGTGCCGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPWPSPG*SQVPSP Trigger: GGGTGACGGCACTTGGGACCAGCCTGGCGAGGGCCA...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACGCTCCATCATCGGCGTaGTCCTCGTCCCGAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHAPSSA*SSSRAQ Trigger: CTGGGCTCGGGACGAGGATCACGCCGATGATGGAGC...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACCAGGCTGGTCCCAAGTaGCGTCACCCACCCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHQAGPK*RHPPTA Trigger: CGCTGTGGGTGGGTGACGGCACTTGGGACCAGCCTG...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGCTGCGTCCTCCCATCAGGGCCCGTCTGGCTGACTCCACACCCCCGTAAAACAGAAGCACGGTaGATTCAAGCACATGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCVLPSGPVWLTPHPRKTEAR*IQAHGP Trigger: AGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTT...ACGGGGGTGTGGAGTCAGCCAGACGGGCCCTGATGGGAGGACGCAGCGCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCACGTCCGGCGCTTCCTaGGCCGCTTTGGTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPTSGAS*AALVCS Trigger: GCTGCAGACCAAAGCGGCCCAGGAAGCGCCGGACGT...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGCGCGTTTTGCATGGTaGCCTCTGGAAAGGCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPARFAW*PLERPP Trigger: GGGCGGCCTTTCCAGAGGGCACCATGCAAAACGCGC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCCTCCACACCCCCGTGTaGTCTAAGCTTCGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPLHTPV*SKLRCG Trigger: CCCGCAGCGAAGCTTAGAGCACACGGGGGTGTGGAG...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGACATTCCGCAGCGCTaGAGAGAGGGACAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPDIPQR*REGQGP Trigger: AGGGCCTTGTCCCTCTCTGCAGCGCTGCGGAATGTC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCCCTGCGCGTTTTGCATaGTGCCCTCTGGAAAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPPARFA*CPLERP Trigger: CGGCCTTTCCAGAGGGCACCATGCAAAACGCGCAGG...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCTTGAGCGGAAGCAGCTaGAGTGCGAGCAGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPLSGSS*SASRCC Trigger: GCAGCACCTGCTCGCACTCCAGCTGCTTCCGCTCAA...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGTATCATGGTCCTCATaGGTGTCCTCGCCACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPVSWSS*VSSPRQ Trigger: CTGGCGTGGCGAGGACACTCATGAGGACCATGATAC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCCTTCCTGGGCCGCTTTaGTCTGCAGCCCCACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPLPGPL*SAAPQN Trigger: GTTTTGTGGGGCTGCAGACCAAAGCGGCCCAGGAAG...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACTTTGGGCAACCACCCTaGGCCTTTGTGACATTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHFGQPP*AFVTFR Trigger: GCGGAATGTCACAAAGGCGCAGGGTGGTTGCCCAAA...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACTGGGCCGCTTTGGTCTaGAGCCCCACAAAACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHWAALV*SPTKPN Trigger: GTTTGGTTTTGTGGGGCTGCAGACCAAAGCGGCCCA...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGGTGCTGCAGAAACTTaGCAAGTGAGTGTGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPGAAET*QVSVGA Trigger: TGCGCCCACACTCACTTGGCAAGTTTCTGCAGCACC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCGTGGTGACCCCTCTATaGACAGTGCCCTATGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPVVTPL*TVPYAE Trigger: CTCAGCATAGGGCACTGTCCATAGAGGGGTCACCAC...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACAGTGCGAGCAGGTGCTaGAGAAACTTGCCAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHSASRC*RNLPSE Trigger: CTCACTTGGCAAGTTTCTGCAGCACCTGCTCGCACT...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACAGGAAGCCAGGTGGATaGACTCAAGCACTGCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLRCGPALSSEARCSGWHRKPGG*TQALPR Trigger: TCTAGGCAGTGCTTGAGTGCATCCACCTGGCTTCCT...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCTGGAGTCTGTCTTCTTaGAATTCAGTGACGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKTEARCIQAHGPRQAGPWSLSS*NSVTKG Trigger: TCCTTTCGTCACTGAATTTCAAGAAGACAGACTCCA...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS CCA 90 bp | GGCCGAGCCGGAGGAAACCCGCCGCCCGCACCAGTTCCTGGAGGCTaGGGCCGTCCCGCGTGGCGACGGCCGCTCCCCAACCCACCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRAGGNPPPAPVPGG*GRPAWRRPLPNPPQ Trigger: TTGGGGTGGGTTGGGGAGCGGCCGTCGCCACGCGGGACGGCCCCAGCCTCCAGGAACTGGTGCGGGCGGCGGGTTTCCTCCGGCTCGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416427.5 |
||
| CDS GCA 90 bp | TGCGCGTTTTGCATGGTGCCCTCTGGAAAGGCCGCCCACTCAGTGTaGGCCTGGCCCGGCCCAAGGCCGACCCCATGGCCAGGAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CAFCMVPSGKAAHSV*AWPGPRPTPWPGGG Trigger: GCCTCCTCCTGGCCATGGGGTCGGCCTTGGGCCGGGCCAGGCGCACACTGAGTGGGCGGCCTTTCCAGAGGGCACCATGCAAAACGCGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 90 bp | GCGGCCCGCACTCAACCAGACACCGCAGCCAACAAAGCCGCCGCCTaGGTCGGCGCATCTAGGACCTGTGCCCCACGCTGGAACGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AARTQPDTAANKAAA*VGASRTCAPRWNAS Trigger: GCTCGCGTTCCAGCGTGGGGCACAGGTCCTAGATGCGCCGACCCAGGCGGCGGCTTTGTTGGCTGCGGTGTCTGGTTGAGTGCGGGCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418705.2 |
||
| CDS CCA 90 bp | TTTTGCATGGTGCCCTCTGGAAAGGCCGCCCACTCAGTGTGCGCCTaGCCCGGCCCAAGGCCGACCCCATGGCCAGGAGGAGGCGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FCMVPSGKAAHSVCA*PGPRPTPWPGGGDR Trigger: CCTGTCGCCTCCTCCTGGCCATGGGGTCGGCCTTGGGCCGGGCCAGGCGCACACTGAGTGGGCGGCCTTTCCAGAGGGCACCATGCAAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 90 bp | AAAGCCGCCGCCTGGGTCGGCGCATCTAGGACCTGTGCCCCACGCTaGAACGCGAGCTTCTGCCACAGAGGCCAGTGGCGGTTCCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: KAAAWVGASRTCAPR*NASFCHRGQWRFQT Trigger: CGTCTGGAACCGCCACTGGCCTCTGTGGCAGAAGCTCGCGTTCCAGCGTGGGGCACAGGTCCTAGATGCGCCGACCCAGGCGGCGGCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418705.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACCCCACCCACAGCGGCTaGCCCGCCCTCGGGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLRCGPALSSEARCSGWHPTHSG*PALGTD Trigger: GTCTGTCCCGAGGGCGGGCAAGCCGCTGTGGGTGGG...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS CCA 90 bp | GGCGACGGAAAGAATAAATGCACCGTACTAGTGGGGAGCCCCAAGTaGGCCGAGCCGGAGGAAACCCGCCGCCCGCACCAGTTCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GDGKNKCTVLVGSPK*AEPEETRRPHQFLE Trigger: CTCCAGGAACTGGTGCGGGCGGCGGGTTTCCTCCGGCTCGGCCCACTTGGGGCTCCCCACTAGTACGGTGCATTTATTCTTTCCGTCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416427.5 ENST00000418705.2 |
||
| CDS GCA 90 bp | ACGCCAGCTTCAGCGACGTCCGGCGCTTCCTGGGCCGCTTTGGTCTaGAGCCCCACAAAACCAAACTCTTTGGGCAACCACCCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TPASATSGASWAALV*SPTKPNSLGNHPAP Trigger: AGGCGCAGGGTGGTTGCCCAAAGAGTTTGGTTTTGTGGGGCTGCAGACCAAAGCGGCCCAGGAAGCGCCGGACGTCGCTGAAGCTGGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 90 bp | AGAACGTGCCTCGCCACGCCAGCTTCAGCGACGTCCGGCGCTTCCTaGGCCGCTTTGGTCTGCAGCCCCACAAAACCAAACTCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTCLATPASATSGAS*AALVCSPTKPNSLG Trigger: GCCCAAAGAGTTTGGTTTTGTGGGGCTGCAGACCAAAGCGGCCCAGGAAGCGCCGGACGTCGCTGAAGCTGGCGTGGCGAGGCACGTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000430524.6 ENST00000432879.5 |
||
| CDS CCA 90 bp | ATGAGTGTCCTCGCCACGCCAGCTTCAGCGACGTCCGGCGCTTCCTaGGCCGCTTTGGTCTGCAGCCCCACAAAACCAAACTCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSVLATPASATSGAS*AALVCSPTKPNSLG Trigger: GCCCAAAGAGTTTGGTTTTGTGGGGCTGCAGACCAAAGCGGCCCAGGAAGCGCCGGACGTCGCTGAAGCTGGCGTGGCGAGGACACTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS GCA 90 bp | ACTCTTTGGGCAACCACCCTGCGCCTTTGTGACATTCCGCAGCGCTaGAGAGAGGGACAAGGCCCTGCGCGTTTTGCATGGTGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLWATTLRLCDIPQR*REGQGPARFAWCPL Trigger: CAGAGGGCACCATGCAAAACGCGCAGGGCCTTGTCCCTCTCTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTGGTTGCCCAAAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 90 bp | CCTCATGAGTGTCCTCTGAGATCTTTAAACTGGAGCTGCAGAACGTaGCTCGCCACGCCAGCTTCAGCGACGTCCGGCGCTTCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHECPLRSLNWSCRT*LATPASATSGASWA Trigger: GGCCCAGGAAGCGCCGGACGTCGCTGAAGCTGGCGTGGCGAGGCACGTTCTGCAGCTCCAGTTTAAAGATCTCAGAGGACACTCATGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430524.6 ENST00000432879.5 |
||
| CDS GCA 90 bp | TCTTCAGAACAGCTCCCTGAGAACCCAGACCATCCCAGGTGCCCATaGCCAGTCCAGGCCACATGCACCCCCAGGATACCCCTACACGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSEQLPENPDHPRCP*PVQATCTPRIPLHV Trigger: GACGTGTAGGGGTATCCTGGGGGTGCATGTGGCCTGGACTGGGCATGGGCACCTGGGATGGTCTGGGTTCTCAGGGAGCTGTTCTGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS GCA 90 bp | GACCACTCTTCAGAACAGCTCCCTGAGAACCCAGACCATCCCAGGTaGCCATGCCCAGTCCAGGCCACATGCACCCCCAGGATACCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: DHSSEQLPENPDHPR*PCPVQATCTPRIPL Trigger: TAGGGGTATCCTGGGGGTGCATGTGGCCTGGACTGGGCATGGGCACCTGGGATGGTCTGGGTTCTCAGGGAGCTGTTCTGAAGAGTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS CCA 90 bp | ATGATTGATGCAGGAGTGCCCACCTGCATCCCCATGACTGAAGCCTaGAGGGCACAGGAGACAGAGCCACGGCCTGCAATGGACGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MIDAGVPTCIPMTEA*RAQETEPRPAMDAS Trigger: GGAGGCGTCCATTGCAGGCCGTGGCTCTGTCTCCTGTGCCCTCCAGGCTTCAGTCATGGGGATGCAGGTGGGCACTCCTGCATCAATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS TCA 90 bp | GCCAGCCTCTACCCACTGCCACTTTCCCTGTCTACCAAGGGCCCATaGTGGGCACAAGACACTGCTGGCTACACAGATGGCTCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASLYPLPLSLSTKGP*WAQDTAGYTDGSAQ Trigger: CTGGGCAGAGCCATCTGTGTAGCCAGCAGTGTCTTGTGCCCATCATGGGCCCTTGGTAGACAGGGAAAGTGGCAGTGGGTAGAGGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS TCA 90 bp | GGGCACCTGTTCCCTGACCGTAAGGCCATCTCCACGAGGAGCTCCTaGGCTGTGTTCAAGATCACTTGGCACACAGACCCCCACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHLFPDRKAISTRSS*AVFKITWHTDPHLQ Trigger: CTGGAGGTGGGGGTCTGTGTGCCAAGTGATCTTGAACACAGCTCAGGAGCTCCTCGTGGAGATGGCCTTACGGTCAGGGAACAGGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS GCA 90 bp | ATGCTGAGCAGCTTGAGCGGAAGCAGCTGGAGTGCGAGCAGGTGCTaGAGAAACTTGCCAAGTGAGTGTGGGCGCAAGACGCCCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSSLSGSSWSASRC*RNLPSECGRKTPLL Trigger: CAAGAGGGGCGTCTTGCGCCCACACTCACTTGGCAAGTTTCTGCAGCACCTGCTCGCACTCCAGCTGCTTCCGCTCAAGCTGCTCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 90 bp | AAAAAGGGCAGTGGGGCCGCCATGCCAGTGGACAGAGCAGCAAGATaGGATGCCCTTCATGCAACTGGCTGCAGGGCAGCAAGGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KKGSGAAMPVDRAAR*DALHATGCRAARAS Trigger: AGATGCCCTTGCTGCCCTGCAGCCAGTTGCATGAAGGGCATCCCATCTTGCTGCTCTGTCCACTGGCATGGCGGCCCCACTGCCCTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467920.1 |
||
| CDS TCA 90 bp | AGCCCCACAAAACCAAACTCTTTGGGCAACCACCCTGCGCCTTTGTaGCATTCCGCAGCGCTGCAGAGAGGGACAAGGCCCTGCGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPTKPNSLGNHPAPL*HSAALQRGTRPCAF Trigger: AAACGCGCAGGGCCTTGTCCCTCTCTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTGGTTGCCCAAAGAGTTTGGTTTTGTGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 90 bp | CTTCCTGGGCCGCTTTGGTCTGCAGCCCCACAAAACCAAACTCTTTaGGCAACCACCCTGCGCCTTTGTGACATTCCGCAGCGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPGPLWSAAPQNQTL*ATTLRLCDIPQRCR Trigger: TCTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTGGTTGCCCAAAGAGTTTGGTTTTGTGGGGCTGCAGACCAAAGCGGCCCAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 90 bp | GCTCACCAACCTGAGGGGTCTGCTTCAGACAACACGGGGACAGTCTaGGGTTGGAGAACCAGGCTTAGACAAAGTACCACGGCGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AHQPEGSASDNTGTV*GWRTRLRQSTTAPE Trigger: CTCAGGCGCCGTGGTACTTTGTCTAAGCCTGGTTCTCCAACCCCAGACTGTCCCCGTGTTGTCTGAAGCAGACCCCTCAGGTTGGTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS-3UTR CAA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACAAGGCCCTGCGCGTTTaGCATGGTGCCCTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KLRCGPALSSEARCSGWHKALRV*HGALWK Trigger: TTTCCAGAGGGCACCATGCAAAACGCGCAGGGCCTT...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CAA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCAGGTGCTGCAGAAACTaGCCAAGTGAGTGTGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EKTEARCIQAHGPRQAGPRCCRN*PSECGR Trigger: GCGCCCACACTCACTTGGCAAGTTTCTGCAGCACCT...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS-3UTR CAA 90 bp | AAGCTTCGCTGCGGGCCTGCTCTGAGTTCAGAGGCACGTTGTAGTGGTTGGCACCCTATGCTGAGCAGCTaGAGCGGAAGCAGCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLRCGPALSSEARCSGWHPMLSS*SGSSWS Trigger: ACTCCAGCTGCTTCCGCTCAAGCTGCTCAGCATAGG...GTGCCAACCACTACAACGTGCCTCTGAACTCAGAGCAGGCCCGCAGCGAAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS GCA 90 bp | TTTGGTCTGCAGCCCCACAAAACCAAACTCTTTGGGCAACCACCCTaGGCCTTTGTGACATTCCGCAGCGCTGCAGAGAGGGACAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGLQPHKTKLFGQPP*AFVTFRSAAERDKA Trigger: GGCCTTGTCCCTCTCTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTGGTTGCCCAAAGAGTTTGGTTTTGTGGGGCTGCAGACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 90 bp | CCACAGCCTCTTCGACACCTTACCCAGAAGCCAGCCTCTACCCACTaGCACTTTCCCTGTCTACCAAGGGCCCATGATGGGCACAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PQPLRHLTQKPASTH*HFPCLPRAHDGHKT Trigger: TGTCTTGTGCCCATCATGGGCCCTTGGTAGACAGGGAAAGTGGCAGTGGGTAGAGGCTGGCTTCTGGGTAAGGTGTCGAAGAGGCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS CCA 90 bp | CTCTATGGACAGTGCCCTATGCTGAGCAGCTTGAGCGGAAGCAGCTaGAGTGCGAGCAGGTGCTGCAGAAACTTGCCAAGTGAGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LYGQCPMLSSLSGSS*SASRCCRNLPSECG Trigger: CCCACACTCACTTGGCAAGTTTCTGCAGCACCTGCTCGCACTCCAGCTGCTTCCGCTCAAGCTGCTCAGCATAGGGCACTGTCCATAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 90 bp | AGTTCCCAATCAGCCCTGAATCTTCCCAAAGGTCCCAGGCCAAGCTaGTGGGGACTGTCGAGGTGGTCGTTCATGCCACCTACTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSQSALNLPKGPRPS*WGLSRWSFMPPTVV Trigger: CACTACAGTAGGTGGCATGAACGACCACCTCGACAGTCCCCAGCAGCTTGGCCTGGGACCTTTGGGAAGATTCAGGGCTGATTGGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||
| CDS CCA 90 bp | TCCCAATCAGCCCTGAATCTTCCCAAAGGTCCCAGGCCAAGCTGCTaGGGACTGTCGAGGTGGTCGTTCATGCCACCTACTGTAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SQSALNLPKGPRPSC*GLSRWSFMPPTVVV Trigger: AACCACTACAGTAGGTGGCATGAACGACCACCTCGACAGTCCCCAGCAGCTTGGCCTGGGACCTTTGGGAAGATTCAGGGCTGATTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||
| CDS TCA 90 bp | CTTGCACTCCATGAAATAACACGCTCCCCAGTTCCCAATCAGCCCTaGATCTTCCCAAAGGTCCCAGGCCAAGCTGCTGGGGACTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LALHEITRSPVPNQP*IFPKVPGQAAGDCR Trigger: TCGACAGTCCCCAGCAGCTTGGCCTGGGACCTTTGGGAAGATTCAGGGCTGATTGGGAACTGGGGAGCGTGTTATTTCATGGAGTGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||
| CDS GCA 90 bp | GATGGGCACAAGACACTGCTGGCTACACAGATGGCTCTGCCCAGATaGCCAGGAGCCCAGAACCAACTTATGATGCACACACAACAACCC | + |
|
Preference number: 5 (lower is better) Translates to: DGHKTLLATQMALPR*PGAQNQLMMHTQQP Trigger: GGGTTGTTGTGTGTGCATCATAAGTTGGTTCTGGGCTCCTGGGCATCTGGGCAGAGCCATCTGTGTAGCCAGCAGTGTCTTGTGCCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS-3UTR CAA 90 bp | GAGAAAACAGAAGCACGGTGCATTCAAGCACATGGCCCTCGCCAGGCTGGTCCCCTGGAGTCTGTCTTCTaGAAATTCAGTGACGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKTEARCIQAHGPRQAGPLESVF*KFSDER Trigger: CCTTTCGTCACTGAATTTCAAGAAGACAGACTCCAG...GGGACCAGCCTGGCGAGGGCCATGTGCTTGAATGCACCGTGCTTCTGTTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435265.5 |
||
| CDS TCA 90 bp | CATGCAACTGGCTGCAGGGCAGCAAGGGCATCTGGTGAAGATTCATaGAAGGAACGGGTTAAATTTCCACATGGGATTAGTCACCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: HATGCRAARASGEDS*KERVKFPHGISHQL Trigger: AAGTTGGTGACTAATCCCATGTGGAAATTTAACCCGTTCCTTTCATGAATCTTCACCAGATGCCCTTGCTGCCCTGCAGCCAGTTGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467920.1 |
||
| CDS TCA 90 bp | TTTCTGGTTTTAAATTCAACAAACACACCACAAACTTGCACTCCATaGAATAACACGCTCCCCAGTTCCCAATCAGCCCTGAATCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLVLNSTNTPQTCTP*NNTLPSSQSALNLP Trigger: GGGAAGATTCAGGGCTGATTGGGAACTGGGGAGCGTGTTATTTCATGGAGTGCAAGTTTGTGGTGTGTTTGTTGAATTTAAAACCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||
| CDS CCA 72 bp | CCGAGCCGGAGGAAACCCGCCGCCCGCACCAGTTCCTaGAGGCTGGGGCCGTCCCGCGTGGCGACGGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSRRKPAARTSS*RLGPSRVATAA Trigger: AGCGGCCGTCGCCACGCGGGACGGCCCCAGCCTCCAGGAACTGGTGCGGGCGGCGGGTTTCCTCCGGCTCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416427.5 |
||
| CDS CCA 72 bp | GGAGGAAACCCGCCGCCCGCACCAGTTCCTGGAGGCTaGGGCCGTCCCGCGTGGCGACGGCCGCTCCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GGNPPPAPVPGG*GRPAWRRPLPN Trigger: GTTGGGGAGCGGCCGTCGCCACGCGGGACGGCCCCAGCCTCCAGGAACTGGTGCGGGCGGCGGGTTTCCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416427.5 |
||
| CDS GCA 72 bp | TGCATGGTGCCCTCTGGAAAGGCCGCCCACTCAGTGTaGGCCTGGCCCGGCCCAAGGCCGACCCCATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CMVPSGKAAHSV*AWPGPRPTPWP Trigger: TGGCCATGGGGTCGGCCTTGGGCCGGGCCAGGCGCACACTGAGTGGGCGGCCTTTCCAGAGGGCACCATGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 72 bp | GCCTGGGTCGGCGCATCTAGGACCTGTGCCCCACGCTaGAACGCGAGCTTCTGCCACAGAGGCCAGTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AWVGASRTCAPR*NASFCHRGQWR Trigger: CCGCCACTGGCCTCTGTGGCAGAAGCTCGCGTTCCAGCGTGGGGCACAGGTCCTAGATGCGCCGACCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418705.2 |
||
| CDS CCA 72 bp | AGGGACAAGGCCCTGCGCGTTTTGCATGGTGCCCTCTaGAAAGGCCGCCCACTCAGTGTGCGCCTGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RDKALRVLHGAL*KGRPLSVRLAR Trigger: CCGGGCCAGGCGCACACTGAGTGGGCGGCCTTTCCAGAGGGCACCATGCAAAACGCGCAGGGCCTTGTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 72 bp | ACTCAACCAGACACCGCAGCCAACAAAGCCGCCGCCTaGGTCGGCGCATCTAGGACCTGTGCCCCACGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TQPDTAANKAAA*VGASRTCAPRW Trigger: CCAGCGTGGGGCACAGGTCCTAGATGCGCCGACCCAGGCGGCGGCTTTGTTGGCTGCGGTGTCTGGTTGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418705.2 |
||
| CDS CAA 90 bp | GTGACATTCCGCAGCGCTGCAGAGAGGGACAAGGCCCTGCGCGTTTaGCATGGTGCCCTCTGGAAAGGCCGCCCACTCAGTGTGCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTFRSAAERDKALRV*HGALWKGRPLSVRL Trigger: CAGGCGCACACTGAGTGGGCGGCCTTTCCAGAGGGCACCATGCAAAACGCGCAGGGCCTTGTCCCTCTCTGCAGCGCTGCGGAATGTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS TCA 72 bp | CCAGCCCTCGGCCACAGAGCACCCTGCTCACCAACCTaGGGGGTCTGCTTCAGACAACACGGGGACAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PALGHRAPCSPT*GVCFRQHGDSL Trigger: CAGACTGTCCCCGTGTTGTCTGAAGCAGACCCCTCAGGTTGGTGAGCAGGGTGCTCTGTGGCCGAGGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS GCA 72 bp | GGCCGCCATGCCAGTGGACAGAGCAGCAAGATGGGATaGCCTTCATGCAACTGGCTGCAGGGCAGCAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRHASGQSSKMG*PSCNWLQGSKG Trigger: GCCCTTGCTGCCCTGCAGCCAGTTGCATGAAGGGCATCCCATCTTGCTGCTCTGTCCACTGGCATGGCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467920.1 |
||
| CDS CCA 72 bp | GCAGGAGTGCCCACCTGCATCCCCATGACTGAAGCCTaGAGGGCACAGGAGACAGAGCCACGGCCTGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: AGVPTCIPMTEA*RAQETEPRPAM Trigger: CATTGCAGGCCGTGGCTCTGTCTCCTGTGCCCTCCAGGCTTCAGTCATGGGGATGCAGGTGGGCACTCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS CAA 90 bp | CTCGCCACGCCAGCTTCAGCGACGTCCGGCGCTTCCTGGGCCGCTTaGGTCTGCAGCCCCACAAAACCAAACTCTTTGGGCAACCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: LATPASATSGASWAA*VCSPTKPNSLGNHP Trigger: AGGGTGGTTGCCCAAAGAGTTTGGTTTTGTGGGGCTGCAGACCAAAGCGGCCCAGGAAGCGCCGGACGTCGCTGAAGCTGGCGTGGCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CAA 90 bp | AGCTTGAGCGGAAGCAGCTGGAGTGCGAGCAGGTGCTGCAGAAACTaGCCAAGTGAGTGTGGGCGCAAGACGCCCCTCTTGGCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSGSSWSASRCCRN*PSECGRKTPLLARA Trigger: AGCCCTGGCCAAGAGGGGCGTCTTGCGCCCACACTCACTTGGCAAGTTTCTGCAGCACCTGCTCGCACTCCAGCTGCTTCCGCTCAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 72 bp | GCAACCACCCTGCGCCTTTGTGACATTCCGCAGCGCTaGAGAGAGGGACAAGGCCCTGCGCGTTTTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: ATTLRLCDIPQR*REGQGPARFAW Trigger: CCATGCAAAACGCGCAGGGCCTTGTCCCTCTCTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTGGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS CAA 72 bp | GGAAGCAGCTGGAGTGCGAGCAGGTGCTGCAGAAACTaGCCAAGTGAGTGTGGGCGCAAGACGCCCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSWSASRCCRN*PSECGRKTPLL Trigger: CAAGAGGGGCGTCTTGCGCCCACACTCACTTGGCAAGTTTCTGCAGCACCTGCTCGCACTCCAGCTGCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 72 bp | TGTCCTCTGAGATCTTTAAACTGGAGCTGCAGAACGTaGCTCGCCACGCCAGCTTCAGCGACGTCCGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPLRSLNWSCRT*LATPASATSGA Trigger: AGCGCCGGACGTCGCTGAAGCTGGCGTGGCGAGGCACGTTCTGCAGCTCCAGTTTAAAGATCTCAGAGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430524.6 ENST00000432879.5 |
||
| CDS GCA 72 bp | AGCTTGAGCGGAAGCAGCTGGAGTGCGAGCAGGTGCTaGAGAAACTTGCCAAGTGAGTGTGGGCGCAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: SLSGSSWSASRC*RNLPSECGRKT Trigger: CGTCTTGCGCCCACACTCACTTGGCAAGTTTCTGCAGCACCTGCTCGCACTCCAGCTGCTTCCGCTCAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 72 bp | CCTGTCTACCAAGGGCCCATGATGGGCACAAGACACTaGTGGCTACACAGATGGCTCTGCCCAGATGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVYQGPMMGTRH*WLHRWLCPDAQ Trigger: CTGGGCATCTGGGCAGAGCCATCTGTGTAGCCAGCAGTGTCTTGTGCCCATCATGGGCCCTTGGTAGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS GCA 72 bp | TCAGCCCTGAATCTTCCCAAAGGTCCCAGGCCAAGCTaGTGGGGACTGTCGAGGTGGTCGTTCATGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SALNLPKGPRPS*WGLSRWSFMPP Trigger: AGGTGGCATGAACGACCACCTCGACAGTCCCCAGCAGCTTGGCCTGGGACCTTTGGGAAGATTCAGGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||
| CDS CCA 72 bp | CCAGTAACACGAGTGGCCGACGTGGTGACCCCTCTATaGACAGTGCCCTATGCTGAGCAGCTTGAGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PVTRVADVVTPL*TVPYAEQLERK Trigger: CTTCCGCTCAAGCTGCTCAGCATAGGGCACTGTCCATAGAGGGGTCACCACGTCGGCCACTCGTGTTACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432879.5 ENST00000435265.5 |
||
| CDS CCA 72 bp | GTCTACCAAGGGCCCATGATGGGCACAAGACACTGCTaGCTACACAGATGGCTCTGCCCAGATGCCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VYQGPMMGTRHC*LHRWLCPDAQE Trigger: CTCCTGGGCATCTGGGCAGAGCCATCTGTGTAGCCAGCAGTGTCTTGTGCCCATCATGGGCCCTTGGTAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS CCA 72 bp | GCCCTGAATCTTCCCAAAGGTCCCAGGCCAAGCTGCTaGGGACTGTCGAGGTGGTCGTTCATGCCACCTACT | + |
|
Preference number: 6 (lower is better) Translates to: ALNLPKGPRPSC*GLSRWSFMPPT Trigger: AGTAGGTGGCATGAACGACCACCTCGACAGTCCCCAGCAGCTTGGCCTGGGACCTTTGGGAAGATTCAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||
| CDS TCA 72 bp | AAACCAAACTCTTTGGGCAACCACCCTGCGCCTTTGTaGCATTCCGCAGCGCTGCAGAGAGGGACAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KPNSLGNHPAPL*HSAALQRGTRP Trigger: GGGCCTTGTCCCTCTCTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTGGTTGCCCAAAGAGTTTGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 72 bp | CAGCCCCACAAAACCAAACTCTTTGGGCAACCACCCTaGGCCTTTGTGACATTCCGCAGCGCTGCAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPHKTKLFGQPP*AFVTFRSAAER Trigger: CCTCTCTGCAGCGCTGCGGAATGTCACAAAGGCGCAGGGTGGTTGCCCAAAGAGTTTGGTTTTGTGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430524.6 ENST00000432879.5 ENST00000435265.5 |
||
| CDS GCA 72 bp | CTTCGACACCTTACCCAGAAGCCAGCCTCTACCCACTaGCACTTTCCCTGTCTACCAAGGGCCCATGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRHLTQKPASTH*HFPCLPRAHDG Trigger: CCCATCATGGGCCCTTGGTAGACAGGGAAAGTGGCAGTGGGTAGAGGCTGGCTTCTGGGTAAGGTGTCGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS CCA 72 bp | GGGTCTGCTTCAGACAACACGGGGACAGTCTGGGGTTaGAGAACCAGGCTTAGACAAAGTACCACGGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSASDNTGTVWG*RTRLRQSTTAP Trigger: AGGCGCCGTGGTACTTTGTCTAAGCCTGGTTCTCCAACCCCAGACTGTCCCCGTGTTGTCTGAAGCAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS CCA 72 bp | AAAGGTCCCAGGCCAAGCTGCTGGGGACTGTCGAGGTaGTCGTTCATGCCACCTACTGTAGTGGTTGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: KGPRPSCWGLSR*SFMPPTVVVGT Trigger: TGTGCCAACCACTACAGTAGGTGGCATGAACGACCACCTCGACAGTCCCCAGCAGCTTGGCCTGGGACCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||
| CDS TCA 72 bp | CTCTGCCCAGATGCCCAGGAGCCCAGAACCAACTTATaGTGCACACACAACAACCCACAACCTGACCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCPDAQEPRTNL*CTHNNPQPDPG Trigger: GCCTGGGTCAGGTTGTGGGTTGTTGTGTGTGCATCATAAGTTGGTTCTGGGCTCCTGGGCATCTGGGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS TCA 72 bp | TTCCCTGACCGTAAGGCCATCTCCACGAGGAGCTCCTaGGCTGTGTTCAAGATCACTTGGCACACAGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPDRKAISTRSS*AVFKITWHTDP Trigger: GGGGTCTGTGTGCCAAGTGATCTTGAACACAGCTCAGGAGCTCCTCGTGGAGATGGCCTTACGGTCAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS CCA 72 bp | CCTGAGGGGTCTGCTTCAGACAACACGGGGACAGTCTaGGGTTGGAGAACCAGGCTTAGACAAAGTACCACG | + |
|
Preference number: 6 (lower is better) Translates to: PEGSASDNTGTV*GWRTRLRQSTT Trigger: CGTGGTACTTTGTCTAAGCCTGGTTCTCCAACCCCAGACTGTCCCCGTGTTGTCTGAAGCAGACCCCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486575.1 |
||
| CDS TCA 72 bp | CAGAGGCCAGTGGCGGTTCCAGACGTAAGAACCGAATaGATGAAGTGCTGCGTGGGCGACGGAAAGAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: QRPVAVPDVRTE*MKCCVGDGKNK Trigger: TTTATTCTTTCCGTCGCCCACGCAGCACTTCATTCATTCGGTTCTTACGTCTGGAACCGCCACTGGCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416427.5 ENST00000418705.2 |
||
| CDS TCA 72 bp | GGCTGCAGGGCAGCAAGGGCATCTGGTGAAGATTCATaGAAGGAACGGGTTAAATTTCCACATGGGATTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCRAARASGEDS*KERVKFPHGIS Trigger: ACTAATCCCATGTGGAAATTTAACCCGTTCCTTTCATGAATCTTCACCAGATGCCCTTGCTGCCCTGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467920.1 |
||
| CDS TCA 72 bp | TTAAATTCAACAAACACACCACAAACTTGCACTCCATaGAATAACACGCTCCCCAGTTCCCAATCAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LNSTNTPQTCTP*NNTLPSSQSAL Trigger: CAGGGCTGATTGGGAACTGGGGAGCGTGTTATTTCATGGAGTGCAAGTTTGTGGTGTGTTTGTTGAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488484.1 |
||