Pregenerated sensors for RAN (Homo sapiens)
Ensembl gene IDs: ENSG00000132341Ensembl transcript IDs: ENST00000448750.7, ENST00000536606.5, ENST00000537745.5, ENST00000539498.1, ENST00000541630.5, ENST00000543796.6
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCAACTGTTCTCCATTACTGAGAAGCCCCCACACTGCCCCACTGTaGATATTCCTAGTATTTCATCCATGTCCTGCTCTGCTGTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TNCSPLLRSPHTAPL*IFLVFHPCPALLCC Trigger: GCAGCACAGCAGAGCAGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCTCAGTAATGGAGAACAGTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR GCA 90 bp | AAAAAGTTTCACCAACTGTTCTCCATTACTGAGAAGCCCCCACACTaGCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: KKFHQLFSITEKPPH*PTVHIPSISSMSCS Trigger: AGAGCAGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCTCAGTAATGGAGAACAGTTGGTGAAACTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR TCA 90 bp | CTAATATTTACACCATGTAACCCTTCTAACCAAATAGAATACTGCTaGCCTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAA | + |
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Preference number: 1 (lower is better) Translates to: LIFTPCNPSNQIEYC*PVIISLCDMAQMYK Trigger: TTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAGGTCAGCAGTATTCTATTTGGTTAGAAGGGTTACATGGTGTAAATATTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACAACTGTTCTCCATTACTaGGAAGCCCCCACACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SHLTGWLETGSEYSVTYTTVLHY*EAPTLP Trigger: GGGCAGTGTGGGGGCTTCTCAGTAATGGAGAACAGT...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | AATTCTCTCCCACACCACGTTAGACAGGTAAGTGACGTCACTTCCAAATTTCAACCTCCTGCCATCCACTaGTGTTCCATCCTGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: NSLPHHVRQVSDVTSKFQPPAIH*CSILFE Trigger: CTCAAACAGGATGGAACATCAGTGGATGGCAGGAGG...TTGAAATTTGGAAGTGACGTCACTTACCTGTCTAACGTGGTGTGGGAGAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTAACTGTTCTCCATTACTaGGAAGCCCCCACACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LLHRRSRMSTPLAISTRLTVLHY*EAPTLP Trigger: GGGCAGTGTGGGGGCTTCTCAGTAATGGAGAACAGT...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | AATTCTCTCCCACACCACGTTAGACAGGTAAGTGACGTCACTTCCAAATTTCAAACAGGTCACAGATTTTaGGCAAGTGCTTCCCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: NSLPHHVRQVSDVTSKFQTGHRF*ASASLG Trigger: ACCTAGGGAAGCACTTGCTCAAAATCTGTGACCTGT...TTGAAATTTGGAAGTGACGTCACTTACCTGTCTAACGTGGTGTGGGAGAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTAGAATTCCCAACCTCCTaGCATCCACTGATGTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: LLHRRSRMSTPLAISTRLEFPTS*HPLMFH Trigger: ATGGAACATCAGTGGATGGCAGGAGGTTGGGAATTC...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACACAAATAGAATACTGCTaGCCTGTCATCATCAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SHLTGWLETGSEYSVTYTQIEYC*PVIISL Trigger: CAAACTGATGATGACAGGTCAGCAGTATTCTATTTG...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR GCA 90 bp | AATTCTCTCCCACACCACGTTAGACAGGTAAGTGACGTCACTTCCAAATTTCAACACACTGCCCCACTGTaGATATTCCTAGTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: NSLPHHVRQVSDVTSKFQHTAPL*IFLVFH Trigger: ATGAAATACTAGGAATATGCACAGTGGGGCAGTGTG...TTGAAATTTGGAAGTGACGTCACTTACCTGTCTAACGTGGTGTGGGAGAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | AATTCTCTCCCACACCACGTTAGACAGGTAAGTGACGTCACTTCCAAATTTCAACAAATAGAATACTGCTaGCCTGTCATCATCAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: NSLPHHVRQVSDVTSKFQQIEYC*PVIISL Trigger: CAAACTGATGATGACAGGTCAGCAGTATTCTATTTG...TTGAAATTTGGAAGTGACGTCACTTACCTGTCTAACGTGGTGTGGGAGAGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACAACCACATTTTTATTCTaGCAGGTCACAGATTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SHLTGWLETGSEYSVTYTTTFLF*QVTDFE Trigger: CTCAAAATCTGTGACCTGTCAGAATAAAAATGTGGT...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTAAAGTCTAGGAGTACCTaGAAACTGTGGGTAAACATG | + |
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Preference number: 2 (lower is better) Translates to: LLHRRSRMSTPLAISTRLKSRST*KLWVNM Trigger: CATGTTTACCCACAGTTTTCAGGTACTCCTAGACTT...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTACACACTGCCCCACTGTaGATATTCCTAGTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LLHRRSRMSTPLAISTRLHTAPL*IFLVFH Trigger: ATGAAATACTAGGAATATGCACAGTGGGGCAGTGTG...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAAGTCTAGGAGTACCTaGAAACTGTGGGTAAACATG | + |
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Preference number: 2 (lower is better) Translates to: FQLLHRRSRMSTPLAISTKSRST*KLWVNM Trigger: CATGTTTACCCACAGTTTTCAGGTACTCCTAGACTT...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR GCA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACACTCAAGATTCCTAACTaGTACAAGAATAGTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SHLTGWLETGSEYSVTYTLKIPN*YKNSVD Trigger: ATCAACACTATTCTTGTAGCAGTTAGGAATCTTGAG...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR CAA 90 bp | CCAAATTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTaGCAATCTCCACAAGGTTACAAACAACACATACACCTTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: PNFNCYIEDPECQHH*QSPQGYKQHIHLQF Trigger: GAATTGAAGGTGTATGTGTTGTTTGTAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAATTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAACCACATTTTTATTCTaGCAGGTCACAGATTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: FQLLHRRSRMSTPLAISTTTFLF*QVTDFE Trigger: CTCAAAATCTGTGACCTGTCAGAATAAAAATGTGGT...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAAAAACGGTGTAGTGTaGACTGCTGAAGAACTTAAA | + |
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Preference number: 2 (lower is better) Translates to: FQLLHRRSRMSTPLAISTKNGVV*TAEELK Trigger: TTTAAGTTCTTCAGCAGTTCACACTACACCGTTTTT...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACACTCAAGATTCCTAACTaGTACAAGAATAGTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: FQLLHRRSRMSTPLAISTLKIPN*YKNSVD Trigger: ATCAACACTATTCTTGTAGCAGTTAGGAATCTTGAG...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR GCA 72 bp | TCTCCATTACTGAGAAGCCCCCACACTGCCCCACTGTaGATATTCCTAGTATTTCATCCATGTCCTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SPLLRSPHTAPL*IFLVFHPCPAL Trigger: CAGAGCAGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCTCAGTAATGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR CAA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACAGACAGGTCACAGATTTaGAGCAAGTGCTTCCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: SHLTGWLETGSEYSVTYTDRSQI*SKCFPR Trigger: CCTAGGGAAGCACTTGCTCAAAATCTGTGACCTGTC...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR CAA 90 bp | AATTCTCTCCCACACCACGTTAGACAGGTAAGTGACGTCACTTCCAAATTTCAAGACAGGTCACAGATTTaGAGCAAGTGCTTCCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: NSLPHHVRQVSDVTSKFQDRSQI*SKCFPR Trigger: CCTAGGGAAGCACTTGCTCAAAATCTGTGACCTGTC...TTGAAATTTGGAAGTGACGTCACTTACCTGTCTAACGTGGTGTGGGAGAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR CAA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACACCTGTCATCATCAGTTaGTGTGACATGGCTCAAATG | + |
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Preference number: 3 (lower is better) Translates to: SHLTGWLETGSEYSVTYTPVIIS*CDMAQM Trigger: CATTTGAGCCATGTCACACAAACTGATGATGACAGG...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR TCA 72 bp | ACACCATGTAACCCTTCTAACCAAATAGAATACTGCTaGCCTGTCATCATCAGTTTGTGTGACATGGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: TPCNPSNQIEYC*PVIISLCDMAQ Trigger: TTGAGCCATGTCACACAAACTGATGATGACAGGTCAGCAGTATTCTATTTGGTTAGAAGGGTTACATGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| 3UTR TCA 72 bp | AACTTCCCATCTCACAGGCTGGTTAGAAACTGGTTCTaGATACAGCGTAACATACACAGCAATTCAGATCTT | + |
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Preference number: 3 (lower is better) Translates to: NFPSHRLVRNWF*IQRNIHSNSDL Trigger: AAGATCTGAATTGCTGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACACCTGTCATCATCAGTTaGTGTGACATGGCTCAAATG | + |
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Preference number: 3 (lower is better) Translates to: FQLLHRRSRMSTPLAISTPVIIS*CDMAQM Trigger: CATTTGAGCCATGTCACACAAACTGATGATGACAGG...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR CAA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTACATGGACCATTTTCCTaGCGTATCAACTTCACACTA | + |
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Preference number: 3 (lower is better) Translates to: LLHRRSRMSTPLAISTRLHGPFS*RINFTL Trigger: TAGTGTGAAGTTGATACGCAAGGAAAATGGTCCATG...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR-3UTR CAA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTAGATGTTCCATCCTGTTaGAGGTTCTACATTAAAACA | + |
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Preference number: 3 (lower is better) Translates to: LLHRRSRMSTPLAISTRLDVPSC*RFYIKT Trigger: TGTTTTAATGTAGAACCTCAAACAGGATGGAACATC...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTCCGCGCCCGTCCGACTaGGGCTGGAAAGATGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPPRPSD*GWKDGG Trigger: TCCGCCATCTTTCCAGCCTCAGTCGGACGGGCGCGG...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGCCGCGCCCGTCCGACTaGGGCTGGAAAGATGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LSSSVCVTWLKCTKINIGPRPSD*GWKDGG Trigger: TCCGCCATCTTTCCAGCCTCAGTCGGACGGGCGCGG...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| CDS-3UTR CCA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTCTGAGGCTGGAAAGATaGCGGAAGCGCAATTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPLRLER*RKRNSN Trigger: GTTTGAATTGCGCTTCCGCCATCTTTCCAGCCTCAG...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448750.7 |
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| CDS-3UTR GCA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTGAATTCCCAACCTCCTaGCATCCACTGATGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPEFPTS*HPLMFH Trigger: ATGGAACATCAGTGGATGGCAGGAGGTTGGGAATTC...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTACCTCCTGCCATCCACTaGTGTTCCATCCTGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLHRRSRMSTPLAISTRLPPAIH*CSILFE Trigger: CTCAAACAGGATGGAACATCAGTGGATGGCAGGAGG...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTGTTAGAAACTGGTTCTaGATACAGCGTAACATACAC | + |
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Preference number: 4 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPVRNWF*IQRNIH Trigger: GTGTATGTTACGCTGTATTCAGAACCAGTTTCTAAC...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR GCA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACAGAATTCCCAACCTCCTaGCATCCACTGATGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SHLTGWLETGSEYSVTYTEFPTS*HPLMFH Trigger: ATGGAACATCAGTGGATGGCAGGAGGTTGGGAATTC...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR GCA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTAATGTCAACACCACTTaGAATCTCCACAAGGTTACA | + |
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Preference number: 4 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPNVNTT*NLHKVT Trigger: TGTAACCTTGTGGAGATTGCAAGTGGTGTTGACATT...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTACCACATTTTTATTCTaGCAGGTCACAGATTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPTTFLF*QVTDFE Trigger: CTCAAAATCTGTGACCTGTCAGAATAAAAATGTGGT...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACACCTCCTGCCATCCACTaGTGTTCCATCCTGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: FQLLHRRSRMSTPLAISTPPAIH*CSILFE Trigger: CTCAAACAGGATGGAACATCAGTGGATGGCAGGAGG...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTAAAAACGGTGTAGTGTaGACTGCTGAAGAACTTAAA | + |
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Preference number: 4 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPKNGVV*TAEELK Trigger: TTTAAGTTCTTCAGCAGTTCACACTACACCGTTTTT...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGACTGTTCTCCATTACTaGGAAGCCCCCACACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSSSVCVTWLKCTKINIGTVLHY*EAPTLP Trigger: GGGCAGTGTGGGGGCTTCTCAGTAATGGAGAACAGT...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | CTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAAGGTTAACAGGTCACAGATTTTaGGCAAGTGCTTCCCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLHRRSRMSTPLAISTRLTGHRF*ASASLG Trigger: ACCTAGGGAAGCACTTGCTCAAAATCTGTGACCTGT...TAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGCCTCCTGCCATCCACTaGTGTTCCATCCTGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LSSSVCVTWLKCTKINIGPPAIH*CSILFE Trigger: CTCAAACAGGATGGAACATCAGTGGATGGCAGGAGG...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | TCCCATCTCACAGGCTGGTTAGAAACTGGTTCTGAATACAGCGTAACATACACAAAGTCTAGGAGTACCTaGAAACTGTGGGTAAACATG | + |
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Preference number: 4 (lower is better) Translates to: SHLTGWLETGSEYSVTYTKSRST*KLWVNM Trigger: CATGTTTACCCACAGTTTTCAGGTACTCCTAGACTT...TGTGTATGTTACGCTGTATTCAGAACCAGTTTCTAACCAGCCTGTGAGATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR GCA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACACACACTGCCCCACTGTaGATATTCCTAGTATTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FQLLHRRSRMSTPLAISTHTAPL*IFLVFH Trigger: ATGAAATACTAGGAATATGCACAGTGGGGCAGTGTG...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAGTTAGAAACTGGTTCTaGATACAGCGTAACATACAC | + |
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Preference number: 4 (lower is better) Translates to: FQLLHRRSRMSTPLAISTVRNWF*IQRNIH Trigger: GTGTATGTTACGCTGTATTCAGAACCAGTTTCTAAC...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| 3UTR CAA 72 bp | AACTGTTACATAGAAGATCCAGAATGTCAACACCACTaGCAATCTCCACAAGGTTACAAACAACACATACAC | + |
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Preference number: 4 (lower is better) Translates to: NCYIEDPECQHH*QSPQGYKQHIH Trigger: GTGTATGTGTTGTTTGTAACCTTGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGCAAATAGAATACTGCTaGCCTGTCATCATCAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LSSSVCVTWLKCTKINIGQIEYC*PVIISL Trigger: CAAACTGATGATGACAGGTCAGCAGTATTCTATTTG...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| CDS-3UTR TCA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGACCACATTTTTATTCTaGCAGGTCACAGATTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LSSSVCVTWLKCTKINIGTTFLF*QVTDFE Trigger: CTCAAAATCTGTGACCTGTCAGAATAAAAATGTGGT...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| CDS-3UTR GCA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGCTCAAGATTCCTAACTaGTACAAGAATAGTGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LSSSVCVTWLKCTKINIGLKIPN*YKNSVD Trigger: ATCAACACTATTCTTGTAGCAGTTAGGAATCTTGAG...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR CAA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTCCTGTCATCATCAGTTaGTGTGACATGGCTCAAATG | + |
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Preference number: 5 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPPVIIS*CDMAQM Trigger: CATTTGAGCCATGTCACACAAACTGATGATGACAGG...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR CAA 90 bp | AGAAGCCCCCACACTGCCCCACTGTGCATATTCCTAGTATTTCATCCATGTCCTGAATGTCAACACCACTaGCAATCTCCACAAGGTTAC | + |
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Preference number: 5 (lower is better) Translates to: RSPHTAPLCIFLVFHPCPECQHH*QSPQGY Trigger: GTAACCTTGTGGAGATTGCAAGTGGTGTTGACATTC...AGGACATGGATGAAATACTAGGAATATGCACAGTGGGGCAGTGTGGGGGCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS TCA 90 bp | TCAACACCCAAGGTGGCTGAAACGGAAACGATGCGATTGAGTGGATaGACTTACCCATTTCTCACATATTTCCACAAGCAAGGTTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: STPKVAETETMRLSG*TYPFLTYFHKQGFP Trigger: TGGAAAACCTTGCTTGTGGAAATATGTGAGAAATGGGTAAGTTCATCCACTCAATCGCATCGTTTCCGTTTCAGCCACCTTGGGTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537745.5 |
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| CDS-3UTR CAA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGGACAGGTCACAGATTTaGAGCAAGTGCTTCCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: LSSSVCVTWLKCTKINIGDRSQI*SKCFPR Trigger: CCTAGGGAAGCACTTGCTCAAAATCTGTGACCTGTC...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| CDS TCA 90 bp | CTTGTGTTTATTTGTACATGCTCAAGGAAAGCAAAAGGCATGGAATaGTTCCAGATAATGTGTTATCGGCAACGTGAGGTTCCAAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: LVFICTCSRKAKGME*FQIMCYRQREVPRE Trigger: CTCTCTTGGAACCTCACGTTGCCGATAACACATTATCTGGAATCATTCCATGCCTTTTGCTTTCCTTGAGCATGTACAAATAAACACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537745.5 ENST00000539498.1 |
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| CDS-3UTR CAA 90 bp | TTTCAACTGTTACATAGAAGATCCAGAATGTCAACACCACTTGCAATCTCCACAGAATGTCAACACCACTaGCAATCTCCACAAGGTTAC | + |
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Preference number: 5 (lower is better) Translates to: FQLLHRRSRMSTPLAISTECQHH*QSPQGY Trigger: GTAACCTTGTGGAGATTGCAAGTGGTGTTGACATTC...TGTGGAGATTGCAAGTGGTGTTGACATTCTGGATCTTCTATGTAACAGTTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR CAA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGCCTGTCATCATCAGTTaGTGTGACATGGCTCAAATG | + |
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Preference number: 5 (lower is better) Translates to: LSSSVCVTWLKCTKINIGPVIIS*CDMAQM Trigger: CATTTGAGCCATGTCACACAAACTGATGATGACAGG...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| CDS-3UTR CAA 90 bp | AATTCTCTCCCACACCACGTTAGACAGGTAAGTGACGTCACTTCCAAATTTCAAGATGTTCCATCCTGTTaGAGGTTCTACATTAAAACA | + |
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Preference number: 5 (lower is better) Translates to: NSLPHHVRQVSDVTSKFQDVPSC*RFYIKT Trigger: TGTTTTAATGTAGAACCTCAAACAGGATGGAACATC...TTGAAATTTGGAAGTGACGTCACTTACCTGTCTAACGTGGTGTGGGAGAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR CAA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGCATGGACCATTTTCCTaGCGTATCAACTTCACACTA | + |
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Preference number: 5 (lower is better) Translates to: LSSSVCVTWLKCTKINIGHGPFS*RINFTL Trigger: TAGTGTGAAGTTGATACGCAAGGAAAATGGTCCATG...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000543796.6 |
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| CDS-3UTR CAA 90 bp | CTGTCATCATCAGTTTGTGTGACATGGCTCAAATGTACAAAAATAAACATAGGGGATGTTCCATCCTGTTaGAGGTTCTACATTAAAACA | + |
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Preference number: 5 (lower is better) Translates to: LSSSVCVTWLKCTKINIGDVPSC*RFYIKT Trigger: TGTTTTAATGTAGAACCTCAAACAGGATGGAACATC...CCCTATGTTTATTTTTGTACATTTGAGCCATGTCACACAAACTGATGATGACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000448750.7 ENST00000541630.5 ENST00000543796.6 |
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| CDS CCA 72 bp | AGCGTCTCCGCGCCCGTCCGACTGAGGCTGGAAAGATaGCGGAAGCGCAATTCAAACGCCGGAGACGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SVSAPVRLRLER*RKRNSNAGDAA Trigger: GGCTGCGTCTCCGGCGTTTGAATTGCGCTTCCGCCATCTTTCCAGCCTCAGTCGGACGGGCGCGGAGACGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448750.7 ENST00000536606.5 |
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| CDS TCA 72 bp | AAGGTGGCTGAAACGGAAACGATGCGATTGAGTGGATaGACTTACCCATTTCTCACATATTTCCACAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: KVAETETMRLSG*TYPFLTYFHKQ Trigger: TTGCTTGTGGAAATATGTGAGAAATGGGTAAGTTCATCCACTCAATCGCATCGTTTCCGTTTCAGCCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537745.5 |
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| CDS TCA 72 bp | CATGGAATGATTCCAGATAATGTGTTATCGGCAACGTaGGGTTCCAAGAGAGATGAGTATTTTCTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: HGMIPDNVLSAT*GSKRDEYFLDS Trigger: GGAATCAAGAAAATACTCATCTCTCTTGGAACCTCACGTTGCCGATAACACATTATCTGGAATCATTCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537745.5 ENST00000539498.1 |
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