RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RALYL (Homo sapiens)

Ensembl gene IDs: ENSG00000184672

Ensembl transcript IDs: ENST00000517638.5, ENST00000517988.1, ENST00000518065.1, ENST00000518566.5, ENST00000521268.6, ENST00000521376.1, ENST00000521695.5, ENST00000522455.5, ENST00000522613.5, ENST00000522647.1, ENST00000523850.5

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCTCCTTTCACATTTCTaGGGGTTGTCACAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGLLSHF*GLSQFL
Trigger: GAGAAACTGTGACAACCCCCAGAAATGTGAAAGGAG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGTCCTTACTTGTCCATaGAATCTCATACCCAGACTG +
Preference number: 2 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGVLTCP*NLIPRL
Trigger: CAGTCTGGGTATGAGATTCCATGGACAAGTAAGGAC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR CCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTAGACAGTCTTTTCCTTaGCAATCTAGTCCTTACTTG +
Preference number: 2 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGRQSFP*QSSPYL
Trigger: CAAGTAAGGACTAGATTGCCAAGGAAAAGACTGTCT...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACAGTTTCTCTTTTCTaGTTTGTGGCATCATGCGTT +
Preference number: 2 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRTVSLF*FVASCV
Trigger: AACGCATGATGCCACAAAGCAGAAAAGAGAAACTGT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTAAATTGAACCAAAGATaGTGCTGTCCAGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGKLNQR*CCPVRN
Trigger: GTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTT...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGGAAAACACTGGCAATaGTTGGGAATGGAGAGTTCC +
Preference number: 2 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSGKHWQ*LGMESS
Trigger: GGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAATTGAACCAAAGATaGTGCTGTCCAGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRKLNQR*CCPVRN
Trigger: GTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCCTCCTTTCACATTTCTaGGGGTTGTCACAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSLLSHF*GLSQFL
Trigger: GAGAAACTGTGACAACCCCCAGAAATGTGAAAGGAG...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAAATTGAACCAAAGATaGTGCTGTCCAGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGKLNQR*CCPVRN
Trigger: GTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACTCCTTTCACATTTCTaGGGGTTGTCACAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: IGSFSSVERSMLNLITDQLLSHF*GLSQFL
Trigger: GAGAAACTGTGACAACCCCCAGAAATGTGAAAGGAG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCACAGTTTCTCTTTTCTaGTTTGTGGCATCATGCGTT +
Preference number: 2 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSTVSLF*FVASCV
Trigger: AACGCATGATGCCACAAAGCAGAAAAGAGAAACTGT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCTCCTTTCACATTTCTaGGGGTTGTCACAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILLSHF*GLSQFL
Trigger: GAGAAACTGTGACAACCCCCAGAAATGTGAAAGGAG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTGAACCAAAGATGCTaGTGTCCAGTAAGAAACCTC +
Preference number: 2 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILNQRC*CPVRNL
Trigger: GAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTACAGTTTCTCTTTTCTaGTTTGTGGCATCATGCGTT +
Preference number: 2 (lower is better)
Translates to: QSSPYLSMESHTQTEVIITVSLF*FVASCV
Trigger: AACGCATGATGCCACAAAGCAGAAAAGAGAAACTGT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTACAGTTTCTCTTTTCTaGTTTGTGGCATCATGCGTT +
Preference number: 2 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLTVSLF*FVASCV
Trigger: AACGCATGATGCCACAAAGCAGAAAAGAGAAACTGT...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTAAATTGAACCAAAGATaGTGCTGTCCAGTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIKLNQR*CCPVRN
Trigger: GTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR CAA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCAATCTAGTCCTTACTaGTCCATGGAATCTCATACC +
Preference number: 3 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRQSSPY*SMESHT
Trigger: GGTATGAGATTCCATGGACAAGTAAGGACTAGATTG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
3UTR-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCCAATCTAGTCCTTACTaGTCCATGGAATCTCATACC +
Preference number: 3 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSQSSPY*SMESHT
Trigger: GGTATGAGATTCCATGGACAAGTAAGGACTAGATTG...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCCCTGCGAGTCGTTGTaGCTGCCACTCTGGGACGCT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGPCESL*LPLWDA
Trigger: AGCGTCCCAGAGTGGCAGTCACAACGACTCGCAGGG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCTCTGCCTCAGGCACTaGCACGTGACTCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGLCLRH*HVTRSQ
Trigger: CTGGCTCCGAGTCACGTGTCAGTGCCTGAGGCAGAG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTACTGCACGGGGAGGTaGAGGCACACGCCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGYCTGR*RHTPVV
Trigger: TACCACGGGCGTGTGCCTCCACCTCCCCGTGCAGTA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCCACGGAGCCCAACTCTaGCTGGCGAGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSHGAQL*LARRRR
Trigger: CCGCCGCCGCCTCGCCAGCCAGAGTTGGGCTCCGTG...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTACTGCACGGGGAGGTaGAGGCACACGCCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRYCTGR*RHTPVV
Trigger: TACCACGGGCGTGTGCCTCCACCTCCCCGTGCAGTA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACCCTGCGAGTCGTTGTaGCTGCCACTCTGGGACGCT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGPCESL*LPLWDA
Trigger: AGCGTCCCAGAGTGGCAGTCACAACGACTCGCAGGG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCAGGAGGAGCAGGAGTTaGGCGTGCGAGGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSRRSRS*ACEGRC
Trigger: GCACCGGCCCTCGCACGCTCAACTCCTGCTCCTCCT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCTTCAGCGGAATTACTaGACGGGGAGGTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGLQRNY*TGRWRH
Trigger: GTGCCTCCACCTCCCCGTGCAGTAATTCCGCTGAAG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTGCGAGTCGTTGTGACTaGCACTCTGGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGASRCD*HSGTLQ
Trigger: CTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGC...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATACTGCACGGGGAGGTaGAGGCACACGCCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGYCTGR*RHTPVV
Trigger: TACCACGGGCGTGTGCCTCCACCTCCCCGTGCAGTA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCACGGAGCCCAACTCTaGCTGGCGAGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLHGAQL*LARRRR
Trigger: CCGCCGCCGCCTCGCCAGCCAGAGTTGGGCTCCGTG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGACTCGGAGCCAGGCTaGCTTGCAGGCAGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSDSEPG*LAGSGE
Trigger: TTCCCCGCTGCCTGCAAGTCAGCCTGGCTCCGAGTC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACATTTTGCTGGACTTaGGAGACGCTCCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRTFCWT*ETLPAG
Trigger: GCCCGCTGGGAGCGTCTCCCAAGTCCAGCAAAATGT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGTGGTTGGCCGGCGATaGCTCTGGCATTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGVVGRR*LWHFLQ
Trigger: CTGGAGAAAATGCCAGAGTCATCGCCGGCCAACCAC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGACTCGGAGCCAGGCTaGCTTGCAGGCAGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQDSEPG*LAGSGE
Trigger: TTCCCCGCTGCCTGCAAGTCAGCCTGGCTCCGAGTC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCCTCTGCCTCAGGCACTaGCACGTGACTCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSLCLRH*HVTRSQ
Trigger: CTGGCTCCGAGTCACGTGTCAGTGCCTGAGGCAGAG...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACTTCAGCGGAATTACTaGACGGGGAGGTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGLQRNY*TGRWRH
Trigger: GTGCCTCCACCTCCCCGTGCAGTAATTCCGCTGAAG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGCGAGTCGTTGTGACTaGCACTCTGGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGASRCD*HSGTLQ
Trigger: CTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATTCTCCATCGGCATCTaGCCCTCCTTCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGFSIGI*PSFSRL
Trigger: GAGCCTGCTGAAGGAGGGCCAGATGCCGATGGAGAA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTCCAATTGCTTCTTCTaGGCTTCTGCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRSNCFF*ASASAF
Trigger: GAAGGCGGAGGCAGAAGCTCAGAAGAAGCAATTGGA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGACTCGGAGCCAGGCTaGCTTGCAGGCAGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLDSEPG*LAGSGE
Trigger: TTCCCCGCTGCCTGCAAGTCAGCCTGGCTCCGAGTC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCTGCTCTCTGCGAGCTaGTCAGCTGTTCACTTCATC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRLLSAS*SAVHFI
Trigger: GATGAAGTGAACAGCTGAGCAGCTCGCAGAGAGCAG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCTTCTTCTGAGCTTCTaGCTCCGCCTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGLLLSF*LRLLLF
Trigger: AAACAGCAGAAGGCGGAGGCAGAAGCTCAGAAGAAG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGCGTGCGAGGGCCGGTaGCATCCTCAAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIACEGR*HPQGSG
Trigger: TCCAGAGCCTTGAGGATGGCACCGGCCCTCGCACGC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATACTGCACGGGGAGGTaGAGGCACACGCCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQYCTGR*RHTPVV
Trigger: TACCACGGGCGTGTGCCTCCACCTCCCCGTGCAGTA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACCATCCTCAAGGCTCTaGAAATGTCTCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGPSSRL*KCLQLR
Trigger: CCGGAGCTGGAGACATTTCCAGAGCCTTGAGGATGG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGTGGTTGGCCGGCGATaGCTCTGGCATTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSVVGRR*LWHFLQ
Trigger: CTGGAGAAAATGCCAGAGTCATCGCCGGCCAACCAC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCCCTGCGAGTCGTTGTaGCTGCCACTCTGGGACGCT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIPCESL*LPLWDA
Trigger: AGCGTCCCAGAGTGGCAGTCACAACGACTCGCAGGG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCCCTGCGAGTCGTTGTaGCTGCCACTCTGGGACGCT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLPCESL*LPLWDA
Trigger: AGCGTCCCAGAGTGGCAGTCACAACGACTCGCAGGG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATCCAATTGCTTCTTCTaGGCTTCTGCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGSNCFF*ASASAF
Trigger: GAAGGCGGAGGCAGAAGCTCAGAAGAAGCAATTGGA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCTCTGCCTCAGGCACTaGCACGTGACTCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILCLRH*HVTRSQ
Trigger: CTGGCTCCGAGTCACGTGTCAGTGCCTGAGGCAGAG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACTGCCTCCGCCTTCTaGTGTTTCTCAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRTASAF*CFSIFS
Trigger: GGAGAAGATTGAGAAACAGCAGAAGGCGGAGGCAGT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521376.1
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACCAGTTGCACATTTTaGTGGACTTGGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRTSCTF*WTWETL
Trigger: GAGCGTCTCCCAAGTCCAGCAAAATGTGCAACTGGT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGCCACTGCAGCTCTTaGATGTCGCTCACTCATGTA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRSHCSS*MSLTHV
Trigger: TACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATTTTCTCCAGCCACTaGAGCTCTTGCATGTCGCTC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRIFSSH*SSCMSL
Trigger: GAGCGACATGCAAGAGCTGCAGTGGCTGGAGAAAAT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTGGTTTGGGCTCTCCTaGCATGTTGATATCAAGTGG +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGWFGLS*HVDIKW
Trigger: CCACTTGATATCAACATGGCAGGAGAGCCCAAACCA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCCTTCAGCGGAATTACTaGACGGGGAGGTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSLQRNY*TGRWRH
Trigger: GTGCCTCCACCTCCCCGTGCAGTAATTCCGCTGAAG...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGCGAGTCGTTGTGACTaGCACTCTGGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSASRCD*HSGTLQ
Trigger: CTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTCTGCCTCCGCCTTCTaGTGTTTCTCAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRSASAF*CFSIFS
Trigger: GGAGAAGATTGAGAAACAGCAGAAGGCGGAGGCAGA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCTTCTTCTGAGCTTCTaGCTCCGCCTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRLLLSF*LRLLLF
Trigger: AAACAGCAGAAGGCGGAGGCAGAAGCTCAGAAGAAG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTGGAAAACACTGGCAATaGTTGGGAATGGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGGKHWQ*LGMESS
Trigger: GGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCC...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTGTTGTGCTCCTGCTTTaGAGTAAGACTGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGVVLLL*SKTVAH
Trigger: GTGAGCAACAGTCTTACTGCAAAGCAGGAGCACAAC...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCACATTTTGCTGGACTTaGGAGACGCTCCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSTFCWT*ETLPAG
Trigger: GCCCGCTGGGAGCGTCTCCCAAGTCCAGCAAAATGT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGTTGCACATTTTGCTaGACTTGGGAGACGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRSCTFC*TWETLP
Trigger: TGGGAGCGTCTCCCAAGTCCAGCAAAATGTGCAACT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTTGATATCAAGTGGTTaGCCGGCGATGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRLISSG*PAMTLA
Trigger: TGCCAGAGTCATCGCCGGCCAACCACTTGATATCAA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTACTGCACGGGGAGGTaGAGGCACACGCCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLYCTGR*RHTPVV
Trigger: TACCACGGGCGTGTGCCTCCACCTCCCCGTGCAGTA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTTCTCCATCGGCATCTaGCCCTCCTTCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSFSIGI*PSFSRL
Trigger: GAGCCTGCTGAAGGAGGGCCAGATGCCGATGGAGAA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGGACAAGAATGCCACTaGGAAGGTACTCACCGAGCG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSGQECH*EGTHRA
Trigger: CGCTCGGTGAGTACCTTCTCAGTGGCATTCTTGTCC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGTGGTTGGCCGGCGATaGCTCTGGCATTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQVVGRR*LWHFLQ
Trigger: CTGGAGAAAATGCCAGAGTCATCGCCGGCCAACCAC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR TCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCAATTTAGAACCTGTTaGCCCACTGGCAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGQFRTC*PTGSRS
Trigger: AGATCTACTGCCAGTGGGTCAACAGGTTCTAAATTG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTCAGGCACTGACACGTaGCTCGGAGCCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIISGTDT*LGARLT
Trigger: AGTCAGCCTGGCTCCGAGTCACGTGTCAGTGCCTGA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCTTTGCTCAGTGGTTTaGACCAGTATTGCAAGACCA +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGLCSVV*TSIARP
Trigger: TGGTCTTGCAATACTGGTGCAAACCACTGAGCAAAG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTTTAATCCTGCTCTCTaGGAGCTGCTCAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRFNPAL*ELLSCS
Trigger: TGAACAGCTGAGCAGCTCGCAGAGAGCAGGATTAAA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAGCCACTGCAGCTCTTaGATGTCGCTCACTCATGTA +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGSHCSS*MSLTHV
Trigger: TACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACTTCAGCGGAATTACTaGACGGGGAGGTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQLQRNY*TGRWRH
Trigger: GTGCCTCCACCTCCCCGTGCAGTAATTCCGCTGAAG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGCGAGTCGTTGTGACTaGCACTCTGGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQASRCD*HSGTLQ
Trigger: CTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCAAAGAGACGGGTTGTaGTCCTGCTTTGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRQRDGL*SCFAVR
Trigger: TCTTACTGCAAAGCAGGAGCACAACCCGTCTCTTTG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGACGGGTTGTGCTCCTaGTTTGCAGTAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGDGLCS*FAVRLL
Trigger: CAACAGTCTTACTGCAAAGCAGGAGCACAACCCGTC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAGTTGCACATTTTGCTaGACTTGGGAGACGCTCCCA +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGSCTFC*TWETLP
Trigger: TGGGAGCGTCTCCCAAGTCCAGCAAAATGTGCAACT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCATGTTGATATCAAGTaGTTGGCCGGCGATGACTCT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRHVDIK*LAGDDS
Trigger: AGAGTCATCGCCGGCCAACCACTTGATATCAACATG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTTTGGTCTGTATaGTTTGGGCTCTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRRFWSV*FGLSCH
Trigger: ATGGCAGGAGAGCCCAAACCATACAGACCAAAACCT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCTTGTTTCCAGGTTTTaGTCTGTATGGTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGLVSRF*SVWFGL
Trigger: GAGCCCAAACCATACAGACCAAAACCTGGAAACAAG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTGACACACATTCCTCTTaGATCAGCACTAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGDTHSS*ISTRLS
Trigger: AGAGAGTCTAGTGCTGATCCAAGAGGAATGTGTGTC...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATTCTCCATCGGCATCTaGCCCTCCTTCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQFSIGI*PSFSRL
Trigger: GAGCCTGCTGAAGGAGGGCCAGATGCCGATGGAGAA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTCCACTGCCATCATTTaGAAATTGATTTACGGGGAG +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGSTAII*KLIYGE
Trigger: CTCCCCGTAAATCAATTTTCAAATGATGGCAGTGGA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGGTGTTTTGCCAGTCATaGTTGGCTCTCCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRVFCQS*LALLAL
Trigger: TAAAGCAAGGAGAGCCAATCATGACTGGCAAAACAC...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGTGGTTGGCCGGCGATaGCTCTGGCATTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLVVGRR*LWHFLQ
Trigger: CTGGAGAAAATGCCAGAGTCATCGCCGGCCAACCAC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCAATTTAGAACCTGTTaGCCCACTGGCAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRQFRTC*PTGSRS
Trigger: AGATCTACTGCCAGTGGGTCAACAGGTTCTAAATTG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTCCAATTGCTTCTTCTaGGCTTCTGCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSSNCFF*ASASAF
Trigger: GAAGGCGGAGGCAGAAGCTCAGAAGAAGCAATTGGA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGGTGATCTGCAATCTCTaGCACACATTCCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRVICNL*HTFLLD
Trigger: ATCCAAGAGGAATGTGTGTCAGAGATTGCAGATCAC...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTTCTCCTACGGTCTGTaGAGATGGTTTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGFSYGL*RWFLPF
Trigger: AAATGGAAGAAACCATCTTCACAGACCGTAGGAGAA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTTGAACCAAAGATGCTaGTGTCCAGTAAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGLNQRC*CPVRNL
Trigger: GAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAAGGCTCAAAACCATaGTCCTCCAGCTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRKGSKP*SSSFPK
Trigger: TTTGGGAAAGCTGGAGGAGCATGGTTTTGAGCCTTT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATGGTTTGGGCTCTCCTaGCATGTTGATATCAAGTGG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGWFGLS*HVDIKW
Trigger: CCACTTGATATCAACATGGCAGGAGAGCCCAAACCA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATAACCGCTGTAAAGTaGAGAAAGGGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRITAVK*RKGPLV
Trigger: AACAAGAGGCCCCTTTCTGCACTTTACAGCGGTTAT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518566.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCTTCAGCGGAATTACTaGACGGGGAGGTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILQRNY*TGRWRH
Trigger: GTGCCTCCACCTCCCCGTGCAGTAATTCCGCTGAAG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGCGAGTCGTTGTGACTaGCACTCTGGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIASRCD*HSGTLQ
Trigger: CTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGCGAGTCGTTGTGACTaGCACTCTGGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLASRCD*HSGTLQ
Trigger: CTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTTCAAGTCTGTAAAGTaGAGAAAGGGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGFKSVK*RKGPLV
Trigger: AACAAGAGGCCCCTTTCTGCACTTTACAGACTTGAA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAGGTTTTGGTCTGTATaGTTTGGGCTCTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGRFWSV*FGLSCH
Trigger: ATGGCAGGAGAGCCCAAACCATACAGACCAAAACCT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCTTGTTTCCAGGTTTTaGTCTGTATGGTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRLVSRF*SVWFGL
Trigger: GAGCCCAAACCATACAGACCAAAACCTGGAAACAAG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGGACACACATTCCTCTTaGATCAGCACTAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRDTHSS*ISTRLS
Trigger: AGAGAGTCTAGTGCTGATCCAAGAGGAATGTGTGTC...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTCTCCATCGGCATCTaGCCCTCCTTCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIFSIGI*PSFSRL
Trigger: GAGCCTGCTGAAGGAGGGCCAGATGCCGATGGAGAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGGTCCTTACTTGTCCATaGAATCTCATACCCAGACTG +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRVLTCP*NLIPRL
Trigger: CAGTCTGGGTATGAGATTCCATGGACAAGTAAGGAC...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAACACTGGCAATGCTTaGGAATGGAGAGTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGNTGNA*EWRVPR
Trigger: CCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGGACAAGAATGCCACTaGGAAGGTACTCACCGAGCG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIGQECH*EGTHRA
Trigger: CGCTCGGTGAGTACCTTCTCAGTGGCATTCTTGTCC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGTGTTTTGCCAGTCATaGTTGGCTCTCCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGVFCQS*LALLAL
Trigger: TAAAGCAAGGAGAGCCAATCATGACTGGCAAAACAC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACAATTTAGAACCTGTTaGCCCACTGGCAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGQFRTC*PTGSRS
Trigger: AGATCTACTGCCAGTGGGTCAACAGGTTCTAAATTG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGTGATCTGCAATCTCTaGCACACATTCCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGVICNL*HTFLLD
Trigger: ATCCAAGAGGAATGTGTGTCAGAGATTGCAGATCAC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTGAACAGGAGGTGAAATaGCATGATGTATGCACTAAT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGEQEVK*HDVCTN
Trigger: ATTAGTGCATACATCATGTCATTTCACCTCCTGTTC...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTTCTCCTACGGTCTGTaGAGATGGTTTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRFSYGL*RWFLPF
Trigger: AAATGGAAGAAACCATCTTCACAGACCGTAGGAGAA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCAGGAAAGGTTCCTTTaGTTCAAGTCTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRQERFL*FKSVKC
Trigger: GCACTTTACAGACTTGAATCAAAGGAACCTTTCCTG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTACAGTTTCTCTTTTCTaGTTTGTGGCATCATGCGTT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGTVSLF*FVASCV
Trigger: AACGCATGATGCCACAAAGCAGAAAAGAGAAACTGT...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTTGAACCAAAGATGCTaGTGTCCAGTAAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRLNQRC*CPVRNL
Trigger: GAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACTTTGCTCAGTGGTTTaGACCAGTATTGCAAGACCA +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGLCSVV*TSIARP
Trigger: TGGTCTTGCAATACTGGTGCAAACCACTGAGCAAAG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACTGCTCTCTGCGAGCTaGTCAGCTGTTCACTTCATC +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQLLSAS*SAVHFI
Trigger: GATGAAGTGAACAGCTGAGCAGCTCGCAGAGAGCAG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAATGATTGGCTCTCCTTaGTTTAATCCTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGMIGSP*FNPALC
Trigger: GCAGAGAGCAGGATTAAAGCAAGGAGAGCCAATCAT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCATTTTCTCCAGCCACTaGAGCTCTTGCATGTCGCTC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSIFSSH*SSCMSL
Trigger: GAGCGACATGCAAGAGCTGCAGTGGCTGGAGAAAAT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCTCCTTGCTTTAATCTaGGTCGTTTACTCATTGCGA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRLLALI*VVYSLR
Trigger: TCGCAATGAGTAAACGACGCAGATTAAAGCAAGGAG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTCTGATGTCTGCGTTTaGTCTTGTACATGGTCATTT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGSDVCV*SCTWSF
Trigger: AAATGACCATGTACAAGAGCAAACGCAGACATCAGA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTATATCTCTGATGTCTaGGTTTGCTCTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGYISDV*VCSCTW
Trigger: CCATGTACAAGAGCAAACGCAGACATCAGAGATATA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACTCCTTTCACATTTCTaGGGGTTGTCACAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGLLSHF*GLSQFL
Trigger: GAGAAACTGTGACAACCCCCAGAAATGTGAAAGGAG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTTGATATCAAGTGGTTaGCCGGCGATGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSLISSG*PAMTLA
Trigger: TGCCAGAGTCATCGCCGGCCAACCACTTGATATCAA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACTTGTTTCCAGGTTTTaGTCTGTATGGTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGLVSRF*SVWFGL
Trigger: GAGCCCAAACCATACAGACCAAAACCTGGAAACAAG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTTATCTGGAAAACACTaGCAATGCTTGGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRLSGKH*QCLGME
Trigger: CTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTCCAATTGCTTCTTCTaGGCTTCTGCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIISNCFF*ASASAF
Trigger: GAAGGCGGAGGCAGAAGCTCAGAAGAAGCAATTGGA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTCCAATTGCTTCTTCTaGGCTTCTGCCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLSNCFF*ASASAF
Trigger: GAAGGCGGAGGCAGAAGCTCAGAAGAAGCAATTGGA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTGTAGAAACAGCTCATaGCCCCCATCTTCATCGAAG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSCRNSS*PPSSSK
Trigger: CTTCGATGAAGATGGGGGTCATGAGCTGTTTCTACA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGGAACAGGAGGTGAAATaGCATGATGTATGCACTAAT +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNREQEVK*HDVCTN
Trigger: ATTAGTGCATACATCATGTCATTTCACCTCCTGTTC...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATTCTCCTACGGTCTGTaGAGATGGTTTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGFSYGL*RWFLPF
Trigger: AAATGGAAGAAACCATCTTCACAGACCGTAGGAGAA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATGTTGATATATCTCTaGTGTCTGCGTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRMLIYL*CLRLLL
Trigger: CAAGAGCAAACGCAGACATCAGAGATATATCAACAT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR GCA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTGCTTTGTGGCATCATaGGTTATTTCAGATCACTTT +
Preference number: 4 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGCFVAS*VISDHF
Trigger: AAAGTGATCTGAAATAACGCATGATGCCACAAAGCA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATTGAACCAAAGATGCTaGTGTCCAGTAAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGLNQRC*CPVRNL
Trigger: GAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGTTCCATAAAACCAGTTaGACATTTTGCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRFHKTS*TFCWTW
Trigger: CCAAGTCCAGCAAAATGTGCAACTGGTTTTATGGAA...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAAGCCACTGCAGCTCTTaGATGTCGCTCACTCATGTA +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQSHCSS*MSLTHV
Trigger: TACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCT...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTGGTTTGGGCTCTCCTaGCATGTTGATATCAAGTGG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSWFGLS*HVDIKW
Trigger: CCACTTGATATCAACATGGCAGGAGAGCCCAAACCA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATCTGCCTCCGCCTTCTaGTGTTTCTCAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQSASAF*CFSIFS
Trigger: GGAGAAGATTGAGAAACAGCAGAAGGCGGAGGCAGA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATGATTGGCTCTCCTTaGTTTAATCTGCGTCGTTTA +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRMIGSP*FNLRRL
Trigger: TAAACGACGCAGATTAAAGCAAGGAGAGCCAATCAT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCAGGTTTTGGTCTGTATaGTTTGGGCTCTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSRFWSV*FGLSCH
Trigger: ATGGCAGGAGAGCCCAAACCATACAGACCAAAACCT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGACAGTCTTTTCCTTaGCAATCTAGTCCTTACTTG +
Preference number: 4 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRRQSFP*QSSPYL
Trigger: CAAGTAAGGACTAGATTGCCAAGGAAAAGACTGTCT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCAACACTGGCAATGCTTaGGAATGGAGAGTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSNTGNA*EWRVPR
Trigger: CCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACCTTGCTTTAATCTATaGAGCCAGGCACCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQPCFNL*SQAPRQ
Trigger: TTGGCGAGGTGCCTGGCTCCATAGATTAAAGCAAGG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522455.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCACTTCATCCTCCGTTaGCAAGGAAACCAAACCGCA +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIHFILR*QGNQTA
Trigger: TGCGGTTTGGTTTCCTTGTCAACGGAGGATGAAGTG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATGTAGAAACAGCTCATaGCCCCCATCTTCATCGAAG +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQCRNSS*PPSSSK
Trigger: CTTCGATGAAGATGGGGGTCATGAGCTGTTTCTACA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGAACAGGAGGTGAAATaGCATGATGTATGCACTAAT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGEQEVK*HDVCTN
Trigger: ATTAGTGCATACATCATGTCATTTCACCTCCTGTTC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAACAGTTTCTCTTTTCTaGTTTGTGGCATCATGCGTT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGTVSLF*FVASCV
Trigger: AACGCATGATGCCACAAAGCAGAAAAGAGAAACTGT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTACCAGTTGCACATTTTaGTGGACTTGGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLTSCTF*WTWETL
Trigger: GAGCGTCTCCCAAGTCCAGCAAAATGTGCAACTGGT...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTATTTTCTCCAGCCACTaGAGCTCTTGCATGTCGCTC +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIIFSSH*SSCMSL
Trigger: GAGCGACATGCAAGAGCTGCAGTGGCTGGAGAAAAT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTCTGCCTCCGCCTTCTaGTGTTTCTCAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLSASAF*CFSIFS
Trigger: GGAGAAGATTGAGAAACAGCAGAAGGCGGAGGCAGA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCTTCTTCTGAGCTTCTaGCTCCGCCTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILLLSF*LRLLLF
Trigger: AAACAGCAGAAGGCGGAGGCAGAAGCTCAGAAGAAG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCTTCTTCTGAGCTTCTaGCTCCGCCTTCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLLLLSF*LRLLLF
Trigger: AAACAGCAGAAGGCGGAGGCAGAAGCTCAGAAGAAG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAATGATTGGCTCTCCTTaGTTTAATCCGAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQMIGSP*FNPSGS
Trigger: ACTCCCGCTCGGATTAAAGCAAGGAGAGCCAATCAT...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521695.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATATATCTCTGATGTCTaGGTTTGCTCTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGYISDV*VCSCTW
Trigger: CCATGTACAAGAGCAAACGCAGACATCAGAGATATA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTGGTTTGGGCTCTCCTaGCATGTTGATATATCTCTG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSWFGLS*HVDISL
Trigger: CAGAGATATATCAACATGGCAGGAGAGCCCAAACCA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTTGATATCAAGTGGTTaGCCGGCGATGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLLISSG*PAMTLA
Trigger: TGCCAGAGTCATCGCCGGCCAACCACTTGATATCAA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTGATATCAAGTGGTTaGCCGGCGATGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILISSG*PAMTLA
Trigger: TGCCAGAGTCATCGCCGGCCAACCACTTGATATCAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACATGTTGATATCAAGTaGTTGGCCGGCGATGACTCT +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQHVDIK*LAGDDS
Trigger: AGAGTCATCGCCGGCCAACCACTTGATATCAACATG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCCTTGTTTCCAGGTTTTaGTCTGTATGGTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSLVSRF*SVWFGL
Trigger: GAGCCCAAACCATACAGACCAAAACCTGGAAACAAG...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGACACACATTCCTCTTaGATCAGCACTAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSDTHSS*ISTRLS
Trigger: AGAGAGTCTAGTGCTGATCCAAGAGGAATGTGTGTC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGTCCTTACTTGTCCATaGAATCTCATACCCAGACTG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSVLTCP*NLIPRL
Trigger: CAGTCTGGGTATGAGATTCCATGGACAAGTAAGGAC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAGACAGTCTTTTCCTTaGCAATCTAGTCCTTACTTG +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGRQSFP*QSSPYL
Trigger: CAAGTAAGGACTAGATTGCCAAGGAAAAGACTGTCT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAAACACTGGCAATGCTTaGGAATGGAGAGTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQNTGNA*EWRVPR
Trigger: CCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTT...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGTGTTTTGCCAGTCATaGTTGGCTCTCCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQVFCQS*LALLAL
Trigger: TAAAGCAAGGAGAGCCAATCATGACTGGCAAAACAC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACAATTTAGAACCTGTTaGCCCACTGGCAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQQFRTC*PTGSRS
Trigger: AGATCTACTGCCAGTGGGTCAACAGGTTCTAAATTG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGTGATCTGCAATCTCTaGCACACATTCCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQVICNL*HTFLLD
Trigger: ATCCAAGAGGAATGTGTGTCAGAGATTGCAGATCAC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTTCTCCTACGGTCTGTaGAGATGGTTTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSFSYGL*RWFLPF
Trigger: AAATGGAAGAAACCATCTTCACAGACCGTAGGAGAA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATGCTTTGTGGCATCATaGGTTATTTCAGATCACTTT +
Preference number: 4 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGCFVAS*VISDHF
Trigger: AAAGTGATCTGAAATAACGCATGATGCCACAAAGCA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTTGAACCAAAGATGCTaGTGTCCAGTAAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSLNQRC*CPVRNL
Trigger: GAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTTAATCCTGCTCTCTaGGAGCTGCTCAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIFNPAL*ELLSCS
Trigger: TGAACAGCTGAGCAGCTCGCAGAGAGCAGGATTAAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTGGTTTGGGCTCTCCTaGCATGTTGATATCAAGTGG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIWFGLS*HVDIKW
Trigger: CCACTTGATATCAACATGGCAGGAGAGCCCAAACCA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTGGTTTGGGCTCTCCTaGCATGTTGATATCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLWFGLS*HVDIKW
Trigger: CCACTTGATATCAACATGGCAGGAGAGCCCAAACCA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGGAAAACACTGGCAATaGTTGGGAATGGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIGKHWQ*LGMESS
Trigger: GGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGGAAAACACTGGCAATaGTTGGGAATGGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLGKHWQ*LGMESS
Trigger: GGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTTCAAGTCTGTAAAGTaGAGAAAGGGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSFKSVK*RKGPLV
Trigger: AACAAGAGGCCCCTTTCTGCACTTTACAGACTTGAA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCAAAGAGACGGGTTGTaGTCCTGCTTTGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLQRDGL*SCFAVR
Trigger: TCTTACTGCAAAGCAGGAGCACAACCCGTCTCTTTG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATGGTTTGGGCTCTCCTaGCATGTTGATATATCTCTG +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQWFGLS*HVDISL
Trigger: CAGAGATATATCAACATGGCAGGAGAGCCCAAACCA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCATGTTGATATCAAGTaGTTGGCCGGCGATGACTCT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIHVDIK*LAGDDS
Trigger: AGAGTCATCGCCGGCCAACCACTTGATATCAACATG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCATGTTGATATCAAGTaGTTGGCCGGCGATGACTCT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLHVDIK*LAGDDS
Trigger: AGAGTCATCGCCGGCCAACCACTTGATATCAACATG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTAGGTTTTGGTCTGTATaGTTTGGGCTCTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIRFWSV*FGLSCH
Trigger: ATGGCAGGAGAGCCCAAACCATACAGACCAAAACCT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTAGGTTTTGGTCTGTATaGTTTGGGCTCTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLRFWSV*FGLSCH
Trigger: ATGGCAGGAGAGCCCAAACCATACAGACCAAAACCT...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACTTGTTTCCAGGTTTTaGTCTGTATGGTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQLVSRF*SVWFGL
Trigger: GAGCCCAAACCATACAGACCAAAACCTGGAAACAAG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTAACACTGGCAATGCTTaGGAATGGAGAGTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIINTGNA*EWRVPR
Trigger: CCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTTATCTGGAAAACACTaGCAATGCTTGGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSLSGKH*QCLGME
Trigger: CTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGTGTTTTGCCAGTCATaGTTGGCTCTCCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLVFCQS*LALLAL
Trigger: TAAAGCAAGGAGAGCCAATCATGACTGGCAAAACAC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCAATTTAGAACCTGTTaGCCCACTGGCAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIQFRTC*PTGSRS
Trigger: AGATCTACTGCCAGTGGGTCAACAGGTTCTAAATTG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGTGATCTGCAATCTCTaGCACACATTCCTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIVICNL*HTFLLD
Trigger: ATCCAAGAGGAATGTGTGTCAGAGATTGCAGATCAC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCCTAGGAACAGGAGGTaGAATGACATGATGTATGCA +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLPRNRR*NDMMYA
Trigger: TGCATACATCATGTCATTTCACCTCCTGTTCCTAGG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCCTAGGAACAGGAGGTaGAATGACATGATGTATGCA +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIPRNRR*NDMMYA
Trigger: TGCATACATCATGTCATTTCACCTCCTGTTCCTAGG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACAGGAAAGGTTCCTTTaGTTCAAGTCTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQQERFL*FKSVKC
Trigger: GCACTTTACAGACTTGAATCAAAGGAACCTTTCCTG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCATGTTGATATATCTCTaGTGTCTGCGTTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSMLIYL*CLRLLL
Trigger: CAAGAGCAAACGCAGACATCAGAGATATATCAACAT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATTGAACCAAAGATGCTaGTGTCCAGTAAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQLNQRC*CPVRNL
Trigger: GAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCTCCTTTCACATTTCTaGGGGTTGTCACAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLLLSHF*GLSQFL
Trigger: GAGAAACTGTGACAACCCCCAGAAATGTGAAAGGAG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCTTGTTTCCAGGTTTTaGTCTGTATGGTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLLVSRF*SVWFGL
Trigger: GAGCCCAAACCATACAGACCAAAACCTGGAAACAAG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGACACACATTCCTCTTaGATCAGCACTAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLDTHSS*ISTRLS
Trigger: AGAGAGTCTAGTGCTGATCCAAGAGGAATGTGTGTC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGACACACATTCCTCTTaGATCAGCACTAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIDTHSS*ISTRLS
Trigger: AGAGAGTCTAGTGCTGATCCAAGAGGAATGTGTGTC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGTCCTTACTTGTCCATaGAATCTCATACCCAGACTG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLVLTCP*NLIPRL
Trigger: CAGTCTGGGTATGAGATTCCATGGACAAGTAAGGAC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGTCCTTACTTGTCCATaGAATCTCATACCCAGACTG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIVLTCP*NLIPRL
Trigger: CAGTCTGGGTATGAGATTCCATGGACAAGTAAGGAC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATTATCTGGAAAACACTaGCAATGCTTGGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQLSGKH*QCLGME
Trigger: CTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTCCACTGCCATCATTTaGAAATTGATTTACGGGGAG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLSTAII*KLIYGE
Trigger: CTCCCCGTAAATCAATTTTCAAATGATGGCAGTGGA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR TCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGAACAGGAGGTGAAATaGCATGATGTATGCACTAAT +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQEQEVK*HDVCTN
Trigger: ATTAGTGCATACATCATGTCATTTCACCTCCTGTTC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTTCTCCTACGGTCTGTaGAGATGGTTTCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLFSYGL*RWFLPF
Trigger: AAATGGAAGAAACCATCTTCACAGACCGTAGGAGAA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCAGGAAAGGTTCCTTTaGTTCAAGTCTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIQERFL*FKSVKC
Trigger: GCACTTTACAGACTTGAATCAAAGGAACCTTTCCTG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAACAGTTTCTCTTTTCTaGTTTGTGGCATCATGCGTT +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQTVSLF*FVASCV
Trigger: AACGCATGATGCCACAAAGCAGAAAAGAGAAACTGT...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCCAAACTTGTAAACACTaGCGTAAAATCCCACCTATA +
Preference number: 4 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSQTCKH*RKIPPI
Trigger: TATAGGTGGGATTTTACGGCAGTGTTTACAAGTTTG...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTATGATTGGCTCTCCTTaGTTTAATCTATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIMIGSP*FNLWSQ
Trigger: CTGGCTCCATAGATTAAAGCAAGGAGAGCCAATCAT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522455.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTCAAGTCTGTAAAGTaGAGAAAGGGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIFKSVK*RKGPLV
Trigger: AACAAGAGGCCCCTTTCTGCACTTTACAGACTTGAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTTCAAGTCTGTAAAGTaGAGAAAGGGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLFKSVK*RKGPLV
Trigger: AACAAGAGGCCCCTTTCTGCACTTTACAGACTTGAA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAAGACAGTCTTTTCCTTaGCAATCTAGTCCTTACTTG +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQRQSFP*QSSPYL
Trigger: CAAGTAAGGACTAGATTGCCAAGGAAAAGACTGTCT...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTATCTGGAAAACACTaGCAATGCTTGGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILSGKH*QCLGME
Trigger: CTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTTATCTGGAAAACACTaGCAATGCTTGGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLLSGKH*QCLGME
Trigger: CTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR TCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGAACAGGAGGTGAAATaGCATGATGTATGCACTAAT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIEQEVK*HDVCTN
Trigger: ATTAGTGCATACATCATGTCATTTCACCTCCTGTTC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACAAACTTGTAAACACTaGCGTAAAATCCCACCTATA +
Preference number: 4 (lower is better)
Translates to: IGSFSSVERSMLNLITDQQTCKH*RKIPPI
Trigger: TATAGGTGGGATTTTACGGCAGTGTTTACAAGTTTG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTCTGATGTCTGCGTTTaGTCTTGTACATGGTCATTT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIISDVCV*SCTWSF
Trigger: AAATGACCATGTACAAGAGCAAACGCAGACATCAGA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR CCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTAGACAGTCTTTTCCTTaGCAATCTAGTCCTTACTTG +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLRQSFP*QSSPYL
Trigger: CAAGTAAGGACTAGATTGCCAAGGAAAAGACTGTCT...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTGCTTTGTGGCATCATaGGTTATTTCAGATCACTTT +
Preference number: 4 (lower is better)
Translates to: QSSPYLSMESHTQTEVIICFVAS*VISDHF
Trigger: AAAGTGATCTGAAATAACGCATGATGCCACAAAGCA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR GCA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTGCTTTGTGGCATCATaGGTTATTTCAGATCACTTT +
Preference number: 4 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLCFVAS*VISDHF
Trigger: AAAGTGATCTGAAATAACGCATGATGCCACAAAGCA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS CCA 90 bp GAGCAGGAGTTGAGCGTGCGAGGGCCGGTGCCATCCTCAAGGCTCTaGAAATGTCTCCAGCTCCGGCTCGCGTGGCCTGGAGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: EQELSVRGPVPSSRL*KCLQLRLAWPGASP
Trigger: GGGGCTGGCTCCAGGCCACGCGAGCCGGAGCTGGAGACATTTCCAGAGCCTTGAGGATGGCACCGGCCCTCGCACGCTCAACTCCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS TCA 90 bp TTTAATCTGCGTCGTTTACTCATTGCGAAGAGGAGGAGCAGGAGTTaGGCGTGCGAGGGCCGGTGCCATCCTCAAGGCTCTGGAAATGTC +
Preference number: 5 (lower is better)
Translates to: FNLRRLLIAKRRSRS*ACEGRCHPQGSGNV
Trigger: GACATTTCCAGAGCCTTGAGGATGGCACCGGCCCTCGCACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCAGATTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS GCA 90 bp CTTGCTTTAATCTATGGAGCCAGGCACCTCGCCAAGGGCTATATCTaGTCTCTGCGAGCTGCTCAGCTGTTCACTTCATCCTCCGTTGAC +
Preference number: 5 (lower is better)
Translates to: LALIYGARHLAKGYI*SLRAAQLFTSSSVD
Trigger: GTCAACGGAGGATGAAGTGAACAGCTGAGCAGCTCGCAGAGAGCAGATATAGCCCTTGGCGAGGTGCCTGGCTCCATAGATTAAAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517988.1
CDS CCA 90 bp GAAGTCCTCCTCTATCCCATCTGTCATCTCTTCTCCATCGGCATCTaGCCCTCCTTCAGCAGGCTCCTCTGTAGAGTGATCTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: EVLLYPICHLFSIGI*PSFSRLLCRVICNL
Trigger: GAGATTGCAGATCACTCTACAGAGGAGCCTGCTGAAGGAGGGCCAGATGCCGATGGAGAAGAGATGACAGATGGGATAGAGGAGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS TCA 90 bp TCTCCATCGGCATCTGGCCCTCCTTCAGCAGGCTCCTCTGTAGAGTaGTCTGCAATCTCTGACACACATTCCTCTTGGATCAGCACTAGA +
Preference number: 5 (lower is better)
Translates to: SPSASGPPSAGSSVE*SAISDTHSSWISTR
Trigger: TCTAGTGCTGATCCAAGAGGAATGTGTGTCAGAGATTGCAGATCACTCTACAGAGGAGCCTGCTGAAGGAGGGCCAGATGCCGATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS CCA 90 bp GTCTGTGTTTTGCCAGTCATGATTGGCTCTCCTTGCTTTAATCTATaGAGCCAGGCACCTCGCCAAGGGCTATATCTGCTCTCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: VCVLPVMIGSPCFNL*SQAPRQGLYLLSAS
Trigger: GCTCGCAGAGAGCAGATATAGCCCTTGGCGAGGTGCCTGGCTCCATAGATTAAAGCAAGGAGAGCCAATCATGACTGGCAAAACACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517988.1
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGAGGAGGAGCAGGAGTaGAGCGTGCGAGGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSEEEQE*SVRGPV
Trigger: CACCGGCCCTCGCACGCTCAACTCCTGCTCCTCCTC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS-3UTR CAA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTGGCTCTCCTGCCATGTaGATATCAAGTGGTTGGCCG +
Preference number: 5 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGGSPAM*ISSGWP
Trigger: CGGCCAACCACTTGATATCAACATGGCAGGAGAGCC...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS GCA 90 bp ATCAAGTGGTTGGCCGGCGATGACTCTGGCATTTTCTCCAGCCACTaGAGCTCTTGCATGTCGCTCACTCATGTACTGTACAAATGCATA +
Preference number: 5 (lower is better)
Translates to: IKWLAGDDSGIFSSH*SSCMSLTHVLYKCI
Trigger: TATGCATTTGTACAGTACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCTGGAGAAAATGCCAGAGTCATCGCCGGCCAACCACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000517988.1
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS GCA 90 bp AAGCAAAGCCCTTTGGTAAAGCAAAATAGGCTGGGTAGGACCTACTaGGTCGTTTACTCATTGCGAAGAGGAGGAGCAGGAGTTGAGCGT +
Preference number: 5 (lower is better)
Translates to: KQSPLVKQNRLGRTY*VVYSLRRGGAGVER
Trigger: ACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCAGTAGGTCCTACCCAGCCTATTTTGCTTTACCAAAGGGCTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522647.1
CDS CCA 90 bp GTCTGTGTTTTGCCAGTCATGATTGGCTCTCCTTGCTTTAATCTATaGAGCCAGGCACCTCGCCAAGGGCTATATCGAGCGGGAGTAAAA +
Preference number: 5 (lower is better)
Translates to: VCVLPVMIGSPCFNL*SQAPRQGLYRAGVK
Trigger: TTTTACTCCCGCTCGATATAGCCCTTGGCGAGGTGCCTGGCTCCATAGATTAAAGCAAGGAGAGCCAATCATGACTGGCAAAACACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522455.5
CDS-3UTR CAA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGCAGCCACTGCAGCTCTaGCATGTCGCTCACTCATGT +
Preference number: 5 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRQPLQL*HVAHSC
Trigger: ACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCTG...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACAGCCACTGCAGCTCTaGCATGTCGCTCACTCATGT +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGQPLQL*HVAHSC
Trigger: ACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCTG...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGTTGATATCAAGTGGTaGGCCGGCGATGACTCTGGC +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGVDIKW*AGDDSG
Trigger: GCCAGAGTCATCGCCGGCCAACCACTTGATATCAAC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGCTCTCCTGCCATGTaGATATCAAGTGGTTGGCCG +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGGSPAM*ISSGWP
Trigger: CGGCCAACCACTTGATATCAACATGGCAGGAGAGCC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGGCAGAAAGGGGCCTCTaGTTTCCAGGTTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRAERGL*FPGFGL
Trigger: CAGACCAAAACCTGGAAACAAGAGGCCCCTTTCTGC...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACACATTTTGCTGGACTaGGGAGACGCTCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQHILLD*GDAPSG
Trigger: CCCGCTGGGAGCGTCTCCCAAGTCCAGCAAAATGTG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGCAGAAAGGGGCCTCTaGTTTCCAGGTTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGAERGL*FPGFGL
Trigger: CAGACCAAAACCTGGAAACAAGAGGCCCCTTTCTGC...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATGCGTCGTTTACTCATaGCGAAGAGGAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGCVVYS*RRGGAG
Trigger: TCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCACATTTTGCTGGACTaGGGAGACGCTCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLHILLD*GDAPSG
Trigger: CCCGCTGGGAGCGTCTCCCAAGTCCAGCAAAATGTG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATCACTTCATCCTCCGTaGACAAGGAAACCAAACCGC +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGSLHPP*TRKPNR
Trigger: GCGGTTTGGTTTCCTTGTCAACGGAGGATGAAGTGA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTTCTTATTGGTGACGTaGCTGGTCTGTGTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGFLLVT*LVCVLP
Trigger: TGGCAAAACACAGACCAGCAACGTCACCAATAAGAA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGTTGATATCAAGTGGTaGGCCGGCGATGACTCTGGC +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSVDIKW*AGDDSG
Trigger: GCCAGAGTCATCGCCGGCCAACCACTTGATATCAAC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGGCTCTCCTGCCATGTaGATATCAAGTGGTTGGCCG +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSGSPAM*ISSGWP
Trigger: CGGCCAACCACTTGATATCAACATGGCAGGAGAGCC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAAGACAAAGAGACGGGTaGTGCTCCTGCTTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGRQRDG*CSCFAV
Trigger: TACTGCAAAGCAGGAGCACAACCCGTCTCTTTGTCT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACCGAGACACAGCGCCTaGTCTACAGAACGATCGCAT +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQPRHSA*STERSH
Trigger: ATGCGATCGTTCTGTAGACAAGGCGCTGTGTCTCGG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTTGGTTTGCACCAGTATaGCAAGACCACAAACTTGTA +
Preference number: 5 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGWFAPV*QDHKLV
Trigger: TACAAGTTTGTGGTCTTGCAATACTGGTGCAAACCA...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATTGCTGGTCTGTGTTTaGCCAGTCATGATTGGCTCT +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGLLVCV*PVMIGS
Trigger: AGAGCCAATCATGACTGGCAAAACACAGACCAGCAA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATTGCCGTATTTAGATaGCCGATGAAAACACGGGAG +
Preference number: 5 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRIAVFR*PMKTRE
Trigger: CTCCCGTGTTTTCATCGGCAATCTAAATACGGCAAT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGTTGATATCAAGTGGTaGGCCGGCGATGACTCTGGC +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQVDIKW*AGDDSG
Trigger: GCCAGAGTCATCGCCGGCCAACCACTTGATATCAAC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGGCTCTCCTGCCATGTaGATATCAAGTGGTTGGCCG +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQGSPAM*ISSGWP
Trigger: CGGCCAACCACTTGATATCAACATGGCAGGAGAGCC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCGCAGAAAGGGGCCTCTaGTTTCCAGGTTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSAERGL*FPGFGL
Trigger: CAGACCAAAACCTGGAAACAAGAGGCCCCTTTCTGC...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp ATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAGGTCAATCTAGTCCTTACTaGTCCATGGAATCTCATACC +
Preference number: 5 (lower is better)
Translates to: IWKTLAMLGNGEFLGTGGQSSPY*SMESHT
Trigger: GGTATGAGATTCCATGGACAAGTAAGGACTAGATTG...ACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCCGAGACACAGCGCCTaGTCTACAGAACGATCGCAT +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIPRHSA*STERSH
Trigger: ATGCGATCGTTCTGTAGACAAGGCGCTGTGTCTCGG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCAACCAGTTGCACATTTaGCTGGACTTGGGAGACGCT +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSNQLHI*LDLGDA
Trigger: AGCGTCTCCCAAGTCCAGCAAAATGTGCAACTGGTT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCAGCCACTGCAGCTCTaGCATGTCGCTCACTCATGT +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLQPLQL*HVAHSC
Trigger: ACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCTG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGTTGATATCAAGTGGTaGGCCGGCGATGACTCTGGC +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIVDIKW*AGDDSG
Trigger: GCCAGAGTCATCGCCGGCCAACCACTTGATATCAAC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATCTTGTTTCCAGGTTTaGGTCTGTATGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGSCFQV*VCMVWA
Trigger: AGCCCAAACCATACAGACCAAAACCTGGAAACAAGA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAGCAGAAAGGGGCCTCTaGTTTCCAGGTTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQAERGL*FPGFGL
Trigger: CAGACCAAAACCTGGAAACAAGAGGCCCCTTTCTGC...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTGCAGAAAGGGGCCTCTaGTTTCCAGGTTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLAERGL*FPGFGL
Trigger: CAGACCAAAACCTGGAAACAAGAGGCCCCTTTCTGC...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTGCAGAAAGGGGCCTCTaGTTTCCAGGTTTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIAERGL*FPGFGL
Trigger: CAGACCAAAACCTGGAAACAAGAGGCCCCTTTCTGC...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGACAGGAAAGGTTCCTTaGATTCAAGTCTGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRTGKVP*IQVCKV
Trigger: CACTTTACAGACTTGAATCAAAGGAACCTTTCCTGT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS TCA 90 bp TCATTACTGCAAACTAACAGCGTCGTCCTCAACATTAAACCCAAGTaGTCATCTTATAAGAAACTATTTCCCCATCCCCTGGAAGACGAC +
Preference number: 5 (lower is better)
Translates to: SLLQTNSVVLNIKPK*SSYKKLFPHPLEDD
Trigger: GTCGTCTTCCAGGGGATGGGGAAATAGTTTCTTATAAGATGATCACTTGGGTTTAATGTTGAGGACGACGCTGTTAGTTTGCAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522647.1
CDS-3UTR CAA 90 bp GATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATAAAATTAATGTCTTaGCTCAGTGGTTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: DYLENTGNAWEWRVPRNRIKLMS*LSGLHQ
Trigger: CTGGTGCAAACCACTGAGCAAAGACATTAATTTTAT...CCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATTCCACTGCCATCATTaGAAAATTGATTTACGGGGA +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGFHCHH*KIDLRG
Trigger: TCCCCGTAAATCAATTTTCAAATGATGGCAGTGGAA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTCACTTCATCCTCCGTaGACAAGGAAACCAAACCGC +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLSLHPP*TRKPNR
Trigger: GCGGTTTGGTTTCCTTGTCAACGGAGGATGAAGTGA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATTGCTGGTCTGTGTTTaGCCAGTCATGATTGGCTCT +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQLLVCV*PVMIGS
Trigger: AGAGCCAATCATGACTGGCAAAACACAGACCAGCAA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCATTGCCGTATTTAGATaGCCGATGAAAACACGGGAG +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSIAVFR*PMKTRE
Trigger: CTCCCGTGTTTTCATCGGCAATCTAAATACGGCAAT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000522455.5
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTCTTGTTTCCAGGTTTaGGTCTGTATGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSSCFQV*VCMVWA
Trigger: AGCCCAAACCATACAGACCAAAACCTGGAAACAAGA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGAACAGGAAAGGTTCCTTaGATTCAAGTCTGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGTGKVP*IQVCKV
Trigger: CACTTTACAGACTTGAATCAAAGGAACCTTTCCTGT...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATGTCTGCGTTTGCTCTaGTACATGGTCATTTTGAAA +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGCLRLL*YMVILK
Trigger: TTTCAAAATGACCATGTACAAGAGCAAACGCAGACA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTATCTGGAAAACACTGGCAATGCTTGGGAATGGAGAGTTCCTAGGAACAGGATGGGTTAATTCTTTCTaGATGGTCTGTAACTCATCT +
Preference number: 5 (lower is better)
Translates to: IIWKTLAMLGNGEFLGTGWVNSF*MVCNSS
Trigger: AGATGAGTTACAGACCATCAAGAAAGAATTAACCCA...TCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAGTGTTTTCCAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTGCTGGTCTGTGTTTaGCCAGTCATGATTGGCTCT +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIILLVCV*PVMIGS
Trigger: AGAGCCAATCATGACTGGCAAAACACAGACCAGCAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATTCTTATTGGTGACGTaGCTGGTCTGTGTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQFLLVT*LVCVLP
Trigger: TGGCAAAACACAGACCAGCAACGTCACCAATAAGAA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAAATTGCCGTATTTAGATaGCCGATGAAAACACGGGAG +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQIAVFR*PMKTRE
Trigger: CTCCCGTGTTTTCATCGGCAATCTAAATACGGCAAT...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATCTTGTTTCCAGGTTTaGGTCTGTATGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQSCFQV*VCMVWA
Trigger: AGCCCAAACCATACAGACCAAAACCTGGAAACAAGA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS CCA 90 bp ATCTTCTCCAGGCGCCCTAGCAAGGAGTCAATTTTAGTTTTGATCTaGGTTAATTCTTTCTTGATGGTCTGTAACTCATCTGATTTCACT +
Preference number: 5 (lower is better)
Translates to: IFSRRPSKESILVLI*VNSFLMVCNSSDFT
Trigger: AGTGAAATCAGATGAGTTACAGACCATCAAGAAAGAATTAACCCAGATCAAAACTAAAATTGACTCCTTGCTAGGGCGCCTGGAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518065.1
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTTCTTATTGGTGACGTaGCTGGTCTGTGTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIFLLVT*LVCVLP
Trigger: TGGCAAAACACAGACCAGCAACGTCACCAATAAGAA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTTCTTATTGGTGACGTaGCTGGTCTGTGTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLFLLVT*LVCVLP
Trigger: TGGCAAAACACAGACCAGCAACGTCACCAATAAGAA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTATTGCCGTATTTAGATaGCCGATGAAAACACGGGAG +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLIAVFR*PMKTRE
Trigger: CTCCCGTGTTTTCATCGGCAATCTAAATACGGCAAT...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTATTGCCGTATTTAGATaGCCGATGAAAACACGGGAG +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIIAVFR*PMKTRE
Trigger: CTCCCGTGTTTTCATCGGCAATCTAAATACGGCAAT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAACAATCTAGTCCTTACTaGTCCATGGAATCTCATACC +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQQSSPY*SMESHT
Trigger: GGTATGAGATTCCATGGACAAGTAAGGACTAGATTG...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCACAGGAAAGGTTCCTTaGATTCAAGTCTGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSTGKVP*IQVCKV
Trigger: CACTTTACAGACTTGAATCAAAGGAACCTTTCCTGT...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS CCA 90 bp ATCTTCTCCAGGCGCCCTAGCAAGGAGTCAATTTTAGTTTTGATCTaGGTTAATTCTTTCTTGATGGTCTGTAACTCATCTGATTTCAAT +
Preference number: 5 (lower is better)
Translates to: IFSRRPSKESILVLI*VNSFLMVCNSSDFN
Trigger: ATTGAAATCAGATGAGTTACAGACCATCAAGAAAGAATTAACCCAGATCAAAACTAAAATTGACTCCTTGCTAGGGCGCCTGGAGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp TATATGTTGAATTCTCCTACGGTCTGTGAAGATGGTTTCTTCCATTTCCACAGCTGGGTTAATTCTTTCTaGATGGTCTGTAACTCATCT +
Preference number: 5 (lower is better)
Translates to: YMLNSPTVCEDGFFHFHSWVNSF*MVCNSS
Trigger: AGATGAGTTACAGACCATCAAGAAAGAATTAACCCA...GCTGTGGAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCAACATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTCAATCTAGTCCTTACTaGTCCATGGAATCTCATACC +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLQSSPY*SMESHT
Trigger: GGTATGAGATTCCATGGACAAGTAAGGACTAGATTG...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTCAATCTAGTCCTTACTaGTCCATGGAATCTCATACC +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIQSSPY*SMESHT
Trigger: GGTATGAGATTCCATGGACAAGTAAGGACTAGATTG...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp ATTGGATCATTTAGTTCAGTAGAGCGGAGCATGCTCAACTTAATCACAGATCAATGGGTTAATTCTTTCTaGATGGTCTGTAACTCATCT +
Preference number: 5 (lower is better)
Translates to: IGSFSSVERSMLNLITDQWVNSF*MVCNSS
Trigger: AGATGAGTTACAGACCATCAAGAAAGAATTAACCCA...TTGATCTGTGATTAAGTTGAGCATGCTCCGCTCTACTGAACTAAATGATCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTACAGGAAAGGTTCCTTaGATTCAAGTCTGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLTGKVP*IQVCKV
Trigger: CACTTTACAGACTTGAATCAAAGGAACCTTTCCTGT...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTACAGGAAAGGTTCCTTaGATTCAAGTCTGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIITGKVP*IQVCKV
Trigger: CACTTTACAGACTTGAATCAAAGGAACCTTTCCTGT...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517638.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTGTCTGCGTTTGCTCTaGTACATGGTCATTTTGAAA +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIICLRLL*YMVILK
Trigger: TTTCAAAATGACCATGTACAAGAGCAAACGCAGACA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521376.1
ENST00000523850.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTTGGGTTAATTCTTTCTaGATGGTCTGTAACTCATCT +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLWVNSF*MVCNSS
Trigger: AGATGAGTTACAGACCATCAAGAAAGAATTAACCCA...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp CAATCTAGTCCTTACTTGTCCATGGAATCTCATACCCAGACTGAAGTAATAATTTGGGTTAATTCTTTCTaGATGGTCTGTAACTCATCT +
Preference number: 5 (lower is better)
Translates to: QSSPYLSMESHTQTEVIIWVNSF*MVCNSS
Trigger: AGATGAGTTACAGACCATCAAGAAAGAATTAACCCA...AATTATTACTTCAGTCTGGGTATGAGATTCCATGGACAAGTAAGGACTAGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS-3UTR CAA 90 bp GGGTTTTTATATAAATTGAACCAAAGATGCTGCTGTCCAGTAAGAAACCTCCTTATAAAATTAATGTCTTaGCTCAGTGGTTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: GFLYKLNQRCCCPVRNLLIKLMS*LSGLHQ
Trigger: CTGGTGCAAACCACTGAGCAAAGACATTAATTTTAT...AAGGAGGTTTCTTACTGGACAGCAGCATCTTTGGTTCAATTTATATAAAAACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS CCA 72 bp TTGAGCGTGCGAGGGCCGGTGCCATCCTCAAGGCTCTaGAAATGTCTCCAGCTCCGGCTCGCGTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: LSVRGPVPSSRL*KCLQLRLAWPG
Trigger: TCCAGGCCACGCGAGCCGGAGCTGGAGACATTTCCAGAGCCTTGAGGATGGCACCGGCCCTCGCACGCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS GCA 72 bp TGTGACTGCCACTCTGGGACGCTTCAGCGGAATTACTaGACGGGGAGGTGGAGGCACACGCCCGTGGTAATC +
Preference number: 6 (lower is better)
Translates to: CDCHSGTLQRNY*TGRWRHTPVVI
Trigger: GATTACCACGGGCGTGTGCCTCCACCTCCCCGTGCAGTAATTCCGCTGAAGCGTCCCAGAGTGGCAGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS CAA 72 bp GCGTCGTTTACTCATTGCGAAGAGGAGGAGCAGGAGTaGAGCGTGCGAGGGCCGGTGCCATCCTCAAGGCTC +
Preference number: 6 (lower is better)
Translates to: ASFTHCEEEEQE*SVRGPVPSSRL
Trigger: GAGCCTTGAGGATGGCACCGGCCCTCGCACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517638.5
ENST00000522647.1
CDS TCA 72 bp CGTCGTTTACTCATTGCGAAGAGGAGGAGCAGGAGTTaGGCGTGCGAGGGCCGGTGCCATCCTCAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: RRLLIAKRRSRS*ACEGRCHPQGS
Trigger: AGAGCCTTGAGGATGGCACCGGCCCTCGCACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517638.5
ENST00000522647.1
CDS CAA 72 bp CGGGCACGGTCGCCGCGGACTCCGAGACACAGCGCCTaGTCTACAGAACGATCGCATGCTAGAAAAACTTGG +
Preference number: 6 (lower is better)
Translates to: RARSPRTPRHSA*STERSHARKTW
Trigger: CCAAGTTTTTCTAGCATGCGATCGTTCTGTAGACAAGGCGCTGTGTCTCGGAGTCCGCGGCGACCGTGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS CAA 90 bp CGCTCCCAGCGGGCACGGTCGCCGCGGACTCCGAGACACAGCGCCTaGTCTACAGAACGATCGCATGCTAGAAAAACTTGGATTCAGGAA +
Preference number: 6 (lower is better)
Translates to: RSQRARSPRTPRHSA*STERSHARKTWIQE
Trigger: TTCCTGAATCCAAGTTTTTCTAGCATGCGATCGTTCTGTAGACAAGGCGCTGTGTCTCGGAGTCCGCGGCGACCGTGCCCGCTGGGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518566.5
ENST00000521268.6
CDS GCA 72 bp GAGCCAGGCACCTCGCCAAGGGCTATATCTGCTCTCTaGGAGCTGCTCAGCTGTTCACTTCATCCTCCGTTG +
Preference number: 6 (lower is better)
Translates to: EPGTSPRAISAL*ELLSCSLHPPL
Trigger: CAACGGAGGATGAAGTGAACAGCTGAGCAGCTCGCAGAGAGCAGATATAGCCCTTGGCGAGGTGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517988.1
CDS CAA 90 bp GTAAAGCAAAATAGGCTGGGTAGGACCTACTGCGTCGTTTACTCATaGCGAAGAGGAGGAGCAGGAGTTGAGCGTGCGAGGGCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: VKQNRLGRTYCVVYS*RRGGAGVERARAGA
Trigger: GGCACCGGCCCTCGCACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCAGTAGGTCCTACCCAGCCTATTTTGCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522647.1
CDS GCA 72 bp GGAAAAGACTCCTTTCCCCCTGCGAGTCGTTGTGACTaGCACTCTGGGACGCTTCAGCGGAATTACTGCACG +
Preference number: 6 (lower is better)
Translates to: GKDSFPPASRCD*HSGTLQRNYCT
Trigger: CGTGCAGTAATTCCGCTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGCAGGGGGAAAGGAGTCTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS GCA 72 bp ATAGGCTGGGTAGGACCTACTGCGTCGTTTACTCATTaGGAAGAGGAGGAGCAGGAGTTGAGCGTGCGAGGG +
Preference number: 6 (lower is better)
Translates to: IGWVGPTASFTH*EEEEQELSVRG
Trigger: CCCTCGCACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCAGTAGGTCCTACCCAGCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522647.1
CDS GCA 72 bp ATCTATGGAGCCAGGCACCTCGCCAAGGGCTATATCTaGTCTCTGCGAGCTGCTCAGCTGTTCACTTCATCC +
Preference number: 6 (lower is better)
Translates to: IYGARHLAKGYI*SLRAAQLFTSS
Trigger: GGATGAAGTGAACAGCTGAGCAGCTCGCAGAGAGCAGATATAGCCCTTGGCGAGGTGCCTGGCTCCATAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517988.1
CDS CAA 72 bp AATAGGCTGGGTAGGACCTACTGCGTCGTTTACTCATaGCGAAGAGGAGGAGCAGGAGTTGAGCGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: NRLGRTYCVVYS*RRGGAGVERAR
Trigger: CCTCGCACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCAGTAGGTCCTACCCAGCCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522647.1
CDS TCA 72 bp TCATGGAAAAGACTCCTTTCCCCCTGCGAGTCGTTGTaGCTGCCACTCTGGGACGCTTCAGCGGAATTACTG +
Preference number: 6 (lower is better)
Translates to: SWKRLLSPCESL*LPLWDASAELL
Trigger: CAGTAATTCCGCTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGCAGGGGGAAAGGAGTCTTTTCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS GCA 72 bp TTGGCCGGCGATGACTCTGGCATTTTCTCCAGCCACTaGAGCTCTTGCATGTCGCTCACTCATGTACTGTAC +
Preference number: 6 (lower is better)
Translates to: LAGDDSGIFSSH*SSCMSLTHVLY
Trigger: GTACAGTACATGAGTGAGCGACATGCAAGAGCTGCAGTGGCTGGAGAAAATGCCAGAGTCATCGCCGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000517638.5
ENST00000517988.1
ENST00000518566.5
ENST00000521268.6
ENST00000521695.5
ENST00000522455.5
ENST00000522613.5
CDS CCA 72 bp TTGCCAGTCATGATTGGCTCTCCTTGCTTTAATCTATaGAGCCAGGCACCTCGCCAAGGGCTATATCGAGCG +
Preference number: 6 (lower is better)
Translates to: LPVMIGSPCFNL*SQAPRQGLYRA
Trigger: CGCTCGATATAGCCCTTGGCGAGGTGCCTGGCTCCATAGATTAAAGCAAGGAGAGCCAATCATGACTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522455.5
CDS CAA 72 bp TTGGCTCTCCTTGCTTTAATCTGCGTCGTTTACTCATaGCGAAGAGGAGGAGCAGGAGTTGAGCGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: LALLALICVVYS*RRGGAGVERAR
Trigger: CCTCGCACGCTCAACTCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCAGATTAAAGCAAGGAGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS CCA 72 bp TTGCCAGTCATGATTGGCTCTCCTTGCTTTAATCTATaGAGCCAGGCACCTCGCCAAGGGCTATATCTGCTC +
Preference number: 6 (lower is better)
Translates to: LPVMIGSPCFNL*SQAPRQGLYLL
Trigger: GAGCAGATATAGCCCTTGGCGAGGTGCCTGGCTCCATAGATTAAAGCAAGGAGAGCCAATCATGACTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517988.1
CDS GCA 72 bp CCTTTGGTAAAGCAAAATAGGCTGGGTAGGACCTACTaGGTCGTTTACTCATTGCGAAGAGGAGGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PLVKQNRLGRTY*VVYSLRRGGAG
Trigger: TCCTGCTCCTCCTCTTCGCAATGAGTAAACGACGCAGTAGGTCCTACCCAGCCTATTTTGCTTTACCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522647.1
CDS CAA 72 bp GGGTCATTCTTATTGGTGACGTTGCTGGTCTGTGTTTaGCCAGTCATGATTGGCTCTCCTTGCTTTAATCCG +
Preference number: 6 (lower is better)
Translates to: GSFLLVTLLVCV*PVMIGSPCFNP
Trigger: CGGATTAAAGCAAGGAGAGCCAATCATGACTGGCAAAACACAGACCAGCAACGTCACCAATAAGAATGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521695.5
CDS CAA 72 bp GGGTCATTCTTATTGGTGACGTTGCTGGTCTGTGTTTaGCCAGTCATGATTGGCTCTCCTTGCTTTAATCCT +
Preference number: 6 (lower is better)
Translates to: GSFLLVTLLVCV*PVMIGSPCFNP
Trigger: AGGATTAAAGCAAGGAGAGCCAATCATGACTGGCAAAACACAGACCAGCAACGTCACCAATAAGAATGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518566.5
ENST00000521268.6
ENST00000522613.5
ENST00000522647.1
CDS CAA 72 bp GGGTCATTCTTATTGGTGACGTTGCTGGTCTGTGTTTaGCCAGTCATGATTGGCTCTCCTTGCTTTAATCTG +
Preference number: 6 (lower is better)
Translates to: GSFLLVTLLVCV*PVMIGSPCFNL
Trigger: CAGATTAAAGCAAGGAGAGCCAATCATGACTGGCAAAACACAGACCAGCAACGTCACCAATAAGAATGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517638.5
CDS GCA 72 bp GTTTTCCTAAATAAAACTAAGGCAGTGAGTTGTACATaGCTCCCTCTAAGCCCTGGGCTTGATGGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: VFLNKTKAVSCT*LPLSPGLDGKE
Trigger: TTCCTTTCCATCAAGCCCAGGGCTTAGAGGGAGGCATGTACAACTCACTGCCTTAGTTTTATTTAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518065.1
CDS CAA 72 bp GGGTCATTCTTATTGGTGACGTTGCTGGTCTGTGTTTaGCCAGTCATGATTGGCTCTCCTTGCTTTAATCTA +
Preference number: 6 (lower is better)
Translates to: GSFLLVTLLVCV*PVMIGSPCFNL
Trigger: TAGATTAAAGCAAGGAGAGCCAATCATGACTGGCAAAACACAGACCAGCAACGTCACCAATAAGAATGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517988.1
ENST00000522455.5
CDS TCA 72 bp CAAACTAACAGCGTCGTCCTCAACATTAAACCCAAGTaGTCATCTTATAAGAAACTATTTCCCCATCCCCTG +
Preference number: 6 (lower is better)
Translates to: QTNSVVLNIKPK*SSYKKLFPHPL
Trigger: CAGGGGATGGGGAAATAGTTTCTTATAAGATGATCACTTGGGTTTAATGTTGAGGACGACGCTGTTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522647.1
CDS CAA 72 bp TTCTCCAGGCGCCCTAGCAAGGAGTCAATTTTAGTTTaGATCTGGGTTAATTCTTTCTTGATGGTCTGTAAC +
Preference number: 6 (lower is better)
Translates to: FSRRPSKESILV*IWVNSFLMVCN
Trigger: GTTACAGACCATCAAGAAAGAATTAACCCAGATCAAAACTAAAATTGACTCCTTGCTAGGGCGCCTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000517638.5
ENST00000518065.1
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS CAA 90 bp TTCTCAATCTTCTCCAGGCGCCCTAGCAAGGAGTCAATTTTAGTTTaGATCTGGGTTAATTCTTTCTTGATGGTCTGTAACTCATCTGAT +
Preference number: 6 (lower is better)
Translates to: FSIFSRRPSKESILV*IWVNSFLMVCNSSD
Trigger: ATCAGATGAGTTACAGACCATCAAGAAAGAATTAACCCAGATCAAAACTAAAATTGACTCCTTGCTAGGGCGCCTGGAGAAGATTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000517638.5
ENST00000518065.1
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS CCA 72 bp AGGCGCCCTAGCAAGGAGTCAATTTTAGTTTTGATCTaGGTTAATTCTTTCTTGATGGTCTGTAACTCATCT +
Preference number: 6 (lower is better)
Translates to: RRPSKESILVLI*VNSFLMVCNSS
Trigger: AGATGAGTTACAGACCATCAAGAAAGAATTAACCCAGATCAAAACTAAAATTGACTCCTTGCTAGGGCGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000517638.5
ENST00000518065.1
ENST00000518566.5
ENST00000521268.6
ENST00000521376.1
ENST00000521695.5
ENST00000522455.5
ENST00000523850.5
CDS CAA 72 bp AAAACCTTCCACTCAAAGTTGTTGCTTGCCACTTCCTaGTGTATTTCATCTATTTTTCATCTACAGGTAGTT +
Preference number: 6 (lower is better)
Translates to: KTFHSKLLLATS*CISSIFHLQVV
Trigger: AACTACCTGTAGATGAAAAATAGATGAAATACACAAGGAAGTGGCAAGCAACAACTTTGAGTGGAAGGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522613.5
CDS CAA 72 bp GAGTCAATTTTAGTTTTGATCTGGGTTAATTCTTTCTaGATGGTCTGTAACTCATCTGATTTCACTGGAAAG +
Preference number: 6 (lower is better)
Translates to: ESILVLIWVNSF*MVCNSSDFTGK
Trigger: CTTTCCAGTGAAATCAGATGAGTTACAGACCATCAAGAAAGAATTAACCCAGATCAAAACTAAAATTGACTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518065.1