RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RALY (Homo sapiens)

Ensembl gene IDs: ENSG00000125970

Ensembl transcript IDs: ENST00000246194.8, ENST00000333552.9, ENST00000375114.7, ENST00000413297.5, ENST00000442805.1, ENST00000448364.5, ENST00000481580.1, ENST00000488227.1, ENST00000489384.1, ENST00000493399.1

Found 859 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGTAACTCCACCTGCAGAGGACATGGCACTGGCTGGGATGCGTTaGGGGAGGAGGCGCCTGCTGCCAGCTTTCCTCTGGTACCCGCTG +
Preference number: 1 (lower is better)
Translates to: PVTPPAEDMALAGMR*GRRRLLPAFLWYPL
Trigger: CAGCGGGTACCAGAGGAAAGCTGGCAGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAGTGCCATGTCCTCTGCAGGTGGAGTTACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GGGGCCTCAGAGTGCTCGCCTGCCCAGGATGACAGGCAGGAGGGCTaGTCAGTGAGAGAGACTTCCCGGTGGAGTTTGAGCACTGCCCAA +
Preference number: 1 (lower is better)
Translates to: GASECSPAQDDRQEG*SVRETSRWSLSTAQ
Trigger: TTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTCCTGCCTGTCATCCTGGGCAGGCGAGCACTCTGAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp CAAGGCCCAGCCCAATTCCAAGGGGCCTGTTTCTCACCCCATGCCTaGATCTCATGGCCTCAGGGCCTCAGCCTCCACCATGGGCTCTTG +
Preference number: 1 (lower is better)
Translates to: QGPAQFQGACFSPHA*ISWPQGLSLHHGLL
Trigger: CAAGAGCCCATGGTGGAGGCTGAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAATTGGGCTGGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTaGCCTCCCACAGCTCCATACCAACGAGACCAGCCTAAGTGGCCA +
Preference number: 1 (lower is better)
Translates to: GGVRARPGTKPISGC*PPTAPYQRDQPKWP
Trigger: TGGCCACTTAGGCTGGTCTCGTTGGTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTaGTGCCCTCCCACAGCTCCATACCAACGAGACCAGCCTAAGTGG +
Preference number: 1 (lower is better)
Translates to: AGGVRARPGTKPISG*CPPTAPYQRDQPKW
Trigger: CCACTTAGGCTGGTCTCGTTGGTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp TGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATaGCCAGGCAAAGCCTTATGGGCCAAGGTGAGTAGAGCTGATGCC +
Preference number: 1 (lower is better)
Translates to: WDSRSPCPAYDPVPA*PGKALWAKVSRADA
Trigger: GGCATCAGCTCTACTCACCTTGGCCCATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GACGGGTGGCCCAAGACAGGGGCAGACAGGCTGCGTGTCTCCGGATaGAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCC +
Preference number: 1 (lower is better)
Translates to: DGWPKTGADRLRVSG*KLPTDCCHWSTLYS
Trigger: GGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCTTGGGCCACCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GGAGGGCTGCTCAGTGAGAGAGACTTCCCGGTGGAGTTTGAGCACTaGCCAAAGCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCA +
Preference number: 1 (lower is better)
Translates to: GGLLSERDFPVEFEH*PKPPPSTKTWSQSP
Trigger: TGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp GGGTGCTGCCCTCCCACAGCTCCATACCAACGAGACCAGCCTAAGTaGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACT +
Preference number: 1 (lower is better)
Translates to: GCCPPTAPYQRDQPK*PHMNPAVHWTRVGT
Trigger: AGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCACTTAGGCTGGTCTCGTTGGTATGGAGCTGTGGGAGGGCAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp GGGAGACTTCTCAGAGGTGGCGACACCACAGCAGCAGCTTCGTCCTaGGCGGCTATTTCCCAGGTAGAGAAAGTAGGAGCAGGAGGAGTA +
Preference number: 1 (lower is better)
Translates to: GRLLRGGDTTAAASS*AAISQVEKVGAGGV
Trigger: TACTCCTCCTGCTCCTACTTTCTCTACCTGGGAAATAGCCGCTCAGGACGAAGCTGCTGCTGTGGTGTCGCCACCTCTGAGAAGTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp TTCTGGAGTTCCAGGATGGGACTCTCGTTCTCCCTGTCCAGCATATaGCCCGGTGCCAGCATGACCAGGCAAAGCCTTATGGGCCAAGGT +
Preference number: 1 (lower is better)
Translates to: FWSSRMGLSFSLSSI*PGASMTRQSLMGQG
Trigger: ACCTTGGCCCATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATCCTGGAACTCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GTAAACCAAGTGGGTCACAACTGCTTGACACTTCAGCCAGCAAGATaGTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCACTGG +
Preference number: 1 (lower is better)
Translates to: VNQVGHNCLTLQPAR*SWASISNPPQWPHW
Trigger: CCAGTGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTGGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp AGCGGCTATTTCCCAGGTAGAGAAAGTAGGAGCAGGAGGAGTACGTaGCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCTCCCAC +
Preference number: 1 (lower is better)
Translates to: SGYFPGRESRSRRST*QAWNKAYFWVLPSH
Trigger: GTGGGAGGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCTCCTACTTTCTCTACCTGGGAAATAGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp CAGCCTCCACCATGGGCTCTTGACAAATCTCTACTCTCTCCCTGCTaGCCAGGGTCCATGGCAAGCAAATATATGGGGACCGTGATCCCC +
Preference number: 1 (lower is better)
Translates to: QPPPWALDKSLLSPC*PGSMASKYMGTVIP
Trigger: GGGGATCACGGTCCCCATATATTTGCTTGCCATGGACCCTGGGCAGCAGGGAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp CAAGTGGGTCACAACTGCTTGACACTTCAGCCAGCAAGATGCTCATaGGCCAGCATATCCAACCCTCCCCAGTGGCCCCACTGGCCATTT +
Preference number: 1 (lower is better)
Translates to: QVGHNCLTLQPARCS*ASISNPPQWPHWPF
Trigger: AAATGGCCAGTGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp AGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGTaGCGACACCACAGCAGCAGCTTCGTCCTGAGCGGCTATTTCCCA +
Preference number: 1 (lower is better)
Translates to: RQLKSSRRVWETSQR*RHHSSSFVLSGYFP
Trigger: TGGGAAATAGCCGCTCAGGACGAAGCTGCTGCTGTGGTGTCGCCACCTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp CAGGATGACAGGCAGGAGGGCTGCTCAGTGAGAGAGACTTCCCGGTaGAGTTTGAGCACTGCCCAAAGCCTCCACCCTCTACCAAAACAT +
Preference number: 1 (lower is better)
Translates to: QDDRQEGCSVRETSR*SLSTAQSLHPLPKH
Trigger: ATGTTTTGGTAGAGGGTGGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTCCTGCCTGTCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp ATGACCCGGTGCCAGCATGACCAGGCAAAGCCTTATGGGCCAAGGTaGGTAGAGCTGATGCCTGCTACCCTTGAAGGTATCTTCCCTGCT +
Preference number: 1 (lower is better)
Translates to: MTRCQHDQAKPYGPR*VELMPATLEGIFPA
Trigger: AGCAGGGAAGATACCTTCAAGGGTAGCAGGCATCAGCTCTACTCACCTTGGCCCATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTaGTGTCACTGGAGTACGCTCTATTCCTTGCTACCAAACCTGCCC +
Preference number: 1 (lower is better)
Translates to: GADRLRVSGCKLPTD*CHWSTLYSLLPNLP
Trigger: GGGCAGGTTTGGTAGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp CCTCAGCCTCCACCATGGGCTCTTGACAAATCTCTACTCTCTCCCTaGTGCCCAGGGTCCATGGCAAGCAAATATATGGGGACCGTGATC +
Preference number: 1 (lower is better)
Translates to: PQPPPWALDKSLLSP*CPGSMASKYMGTVI
Trigger: GATCACGGTCCCCATATATTTGCTTGCCATGGACCCTGGGCAGCAGGGAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGGAGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp TTCCCAGGTAGAGAAAGTAGGAGCAGGAGGAGTACGTGCCAGGCCTaGAACAAAGCCTATTTCTGGGTGCTGCCCTCCCACAGCTCCATA +
Preference number: 1 (lower is better)
Translates to: FPGRESRSRRSTCQA*NKAYFWVLPSHSSI
Trigger: TATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCTCCTACTTTCTCTACCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp AAAGGGATTTTAGGCAGGGAAGGGATACGTTTCAGAAAGACTGCGTaGCTGCTGGGAGATGGTACAGGGCAGAGGCAGAAGACTGGGAGG +
Preference number: 1 (lower is better)
Translates to: KGILGREGIRFRKTA*LLGDGTGQRQKTGR
Trigger: CCTCCCAGTCTTCTGCCTCTGCCCTGTACCATCTCCCAGCAGCCACGCAGTCTTTCTGAAACGTATCCCTTCCCTGCCTAAAATCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp TCCTATGGGGCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATaGCAAATACCTGACGCTCACGTGCCCACACTTGAATTCCATGCT +
Preference number: 1 (lower is better)
Translates to: SYGAGYDLTGQPGQG*QIPDAHVPTLEFHA
Trigger: AGCATGGAATTCAAGTGTGGGCACGTGAGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp GACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTaGTTGCTGTCACTGGAGTACGCTCTATTCCTTGCTACCAAACCT +
Preference number: 1 (lower is better)
Translates to: DRGRQAACLRMQTSY*LLSLEYALFLATKP
Trigger: AGGTTTGGTAGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp AGCTGGCTCTCGCCTTCTGGGCAAGGAAAGATGTGGGTACATGGATaGGTGAAGTATGTTCCACTGAGAGCTCTTCAGGGAGATGAGGCA +
Preference number: 1 (lower is better)
Translates to: SWLSPSGQGKMWVHG*VKYVPLRALQGDEA
Trigger: TGCCTCATCTCCCTGAAGAGCTCTCAGTGGAACATACTTCACCCATCCATGTACCCACATCTTTCCTTGCCCAGAAGGCGAGAGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp CCTCTGTACACCCTCTTCAGCTCTCCAAATAGAAGCCTTTTGATTTaGCTAAGCTGGGCCAAGGCCCAGCCCAATTCCAAGGGGCCTGTT +
Preference number: 1 (lower is better)
Translates to: PLYTLFSSPNRSLLI*LSWAKAQPNSKGPV
Trigger: AACAGGCCCCTTGGAATTGGGCTGGGCCTTGGCCCAGCTTAGTCAAATCAAAAGGCTTCTATTTGGAGAGCTGAAGAGGGTGTACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp AAAGCCTTATGGGCCAAGGTGAGTAGAGCTGATGCCTGCTACCCTTaGAGGTATCTTCCCTGCTTTTCTCACGGTTCTCCAAGCCTGGCA +
Preference number: 1 (lower is better)
Translates to: KALWAKVSRADACYP*RYLPCFSHGSPSLA
Trigger: TGCCAGGCTTGGAGAACCGTGAGAAAAGCAGGGAAGATACCTTCAAGGGTAGCAGGCATCAGCTCTACTCACCTTGGCCCATAAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp CGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTaGCATTTGATACTGCTGTCAGCTGAACATGTACACGTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: RWLGWSHLEAFLSHV*HLILLSAEHVHVAS
Trigger: AGAGGCCACGTGTACATGTTCAGCTGACAGCAGTATCAAATGTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp TGTGTCAGGGGCAGGAAAGGGGTGGTGACAAGAAACAGGAGAGGCTaGAGTAAGCAGGATCTTACACCCTACATTCAGGAGGTAGGGTTT +
Preference number: 1 (lower is better)
Translates to: CVRGRKGVVTRNRRG*SKQDLTPYIQEVGF
Trigger: AAACCCTACCTCCTGAATGTAGGGTGTAAGATCCTGCTTACTCCAGCCTCTCCTGTTTCTTGTCACCACCCCTTTCCTGCCCCTGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp ATGGGGACACCAAGAGCTAAGGGCAGTAATGACTTGCCAGGGTATTaGAATGGGTCTGTTATAGCTGGCTCTCGCCTTCTGGGCAAGGAA +
Preference number: 1 (lower is better)
Translates to: MGTPRAKGSNDLPGY*NGSVIAGSRLLGKE
Trigger: TTCCTTGCCCAGAAGGCGAGAGCCAGCTATAACAGACCCATTTCAATACCCTGGCAAGTCATTACTGCCCTTAGCTCTTGGTGTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp GAAGCCTATGGTCACAAGCCCATGATCAACCTGACCCTCAAGCTCTaGAACGTTGAGTTCCTCAGTAAAGCATGCTTGGGTAGGACCTGC +
Preference number: 1 (lower is better)
Translates to: EAYGHKPMINLTLKL*NVEFLSKACLGRTC
Trigger: GCAGGTCCTACCCAAGCATGCTTTACTGAGGAACTCAACGTTTCAGAGCTTGAGGGTCAGGTTGATCATGGGCTTGTGACCATAGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp CACGTGTCACCATGCCTGGCTAACCGGATTCTCGATGGCAGCTTTTaGACCCAAGTCCCCATGTCTGAAGATCCCTGGACTTTACAATTT +
Preference number: 1 (lower is better)
Translates to: HVSPCLANRILDGSF*TQVPMSEDPWTLQF
Trigger: AAATTGTAAAGTCCAGGGATCTTCAGACATGGGGACTTGGGTTCAAAAGCTGCCATCGAGAATCCGGTTAGCCAGGCATGGTGACACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GATAAGGTCTTGACCTACTATGGGGTAAACCAAGTGGGTCACAACTaGTTGACACTTCAGCCAGCAAGATGCTCATGGGCCAGCATATCC +
Preference number: 1 (lower is better)
Translates to: DKVLTYYGVNQVGHN*LTLQPARCSWASIS
Trigger: GGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTGGTTTACCCCATAGTAGGTCAAGACCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp TTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTCACGTaGCCACACTTGAATTCCATGCTCATAAGAGAAACTGCCAAACTA +
Preference number: 1 (lower is better)
Translates to: LRVNLARDGKYLTLT*PHLNSMLIRETAKL
Trigger: TAGTTTGGCAGTTTCTCTTATGAGCATGGAATTCAAGTGTGGGCACGTGAGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp TTGTGCCCTCAGTGTGAGGTTCATTCAGCTCTAAATCCCATTCTTTaGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCAT +
Preference number: 1 (lower is better)
Translates to: LCPQCEVHSALNPIL*TLPKFQSRLAAVPH
Trigger: ATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGGGATTTAGAGCTGAATGAACCTCACACTGAGGGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GTTAGAAAAATGACAACTGTTGCGCAGCGGAATGGATGTTTTTGCTaGCCCGACTCAGAGGAAGGGCATGTGTATGCACTGTTAGAAGCC +
Preference number: 1 (lower is better)
Translates to: VRKMTTVAQRNGCFC*PDSEEGHVYALLEA
Trigger: GGCTTCTAACAGTGCATACACATGCCCTTCCTCTGAGTCGGGGCAGCAAAAACATCCATTCCGCTGCGCAACAGTTGTCATTTTTCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp GATATCTTCATGAGAAAACACAAACCATCCCATCTCAGAACAGGTTaGGATCCAATCTCTTTATTGTCAGGGTCCCCTCCCTGTGGCCCC +
Preference number: 1 (lower is better)
Translates to: DIFMRKHKPSHLRTG*DPISLLSGSPPCGP
Trigger: GGGGCCACAGGGAGGGGACCCTGACAATAAAGAGATTGGATCCCAACCTGTTCTGAGATGGGATGGTTTGTGTTTTCTCATGAAGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp AATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTaGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACATT +
Preference number: 1 (lower is better)
Translates to: NGISEAVLTLFSDGG*AGVILKPSSLMSDI
Trigger: AATGTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp CTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGCTACCAAACCTaGCCGGAGTGTGAAGAACTTGTGTGTTTTGTGAGACTGAGATGT +
Preference number: 1 (lower is better)
Translates to: LIAVTGVRSIPCYQT*PECEELVCFVRLRC
Trigger: ACATCTCAGTCTCACAAAACACACAAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTaGTACCAAACCTGCCCGGAGTGTGAAGAACTTGTGTGTTTTGTG +
Preference number: 1 (lower is better)
Translates to: ANFLLIAVTGVRSIP*YQTCPECEELVCFV
Trigger: CACAAAACACACAAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GGTTGGGATGAAAACCAAGGATGCCTGGCTCAGAATCTTTTGCTCTaGTTTGCCTTCTCTATTTCTGTGGTCTTGTCAGACAGGCCTACT +
Preference number: 1 (lower is better)
Translates to: GWDENQGCLAQNLLL*FAFSISVVLSDRPT
Trigger: AGTAGGCCTGTCTGACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATCCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GATCTGGTTGGGATGAAAACCAAGGATGCCTGGCTCAGAATCTTTTaGTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCAGACAGGC +
Preference number: 1 (lower is better)
Translates to: DLVGMKTKDAWLRIF*SALPSLFLWSCQTG
Trigger: GCCTGTCTGACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATCCCAACCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp GCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTaGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCA +
Preference number: 1 (lower is better)
Translates to: AWLRIFCSALPSLFL*SCQTGLLHITSYGA
Trigger: TGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 90 bp CCTCAATCAATCAATGATCTGGTTGGGATGAAAACCAAGGATGCCTaGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGG +
Preference number: 1 (lower is better)
Translates to: PQSINDLVGMKTKDA*LRIFCSALPSLFLW
Trigger: CCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATCCCAACCAGATCATTGATTGATTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp AGCATCTTCAAACAACGTTTTATTATCTCTCATGGTGCTGGGCTTTaGATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTG +
Preference number: 1 (lower is better)
Translates to: SIFKQRFIISHGAGL*MASVRQFLLCSQTV
Trigger: CACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCATTCAAAGCCCAGCACCATGAGAGATAATAAAACGTTGTTTGAAGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 90 bp AGGCTACTAAATTTGGGGGTGGTTTGTTATACAACAGTCAGTAACTaGACAAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCA +
Preference number: 1 (lower is better)
Translates to: RLLNLGVVCYTTVSN*TKAHLLSLIQINLS
Trigger: TGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTTGTTCAGTTACTGACTGTTGTATAACAAACCACCCCCAAATTTAGTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 90 bp GACGCTCACGTGCCCACACTTGAATTCCATGCTCATAAGAGAAACTaGCAAACTATCATGTCAGTATTTCCAAACAGTCTGAAAATTGCT +
Preference number: 1 (lower is better)
Translates to: DAHVPTLEFHAHKRN*QTIMSVFPNSLKIA
Trigger: AGCAATTTTCAGACTGTTTGGAAATACTGACATGATAGTTTGGCAGTTTCTCTTATGAGCATGGAATTCAAGTGTGGGCACGTGAGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCTGGCCACCTTGGGGCTaGCCTAGTCAGGCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAWPPWG*PSQAPA
Trigger: TGCTGGGGCCTGACTAGGCCAGCCCCAAGGTGGCCA...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCACTGGGGCCTCAGAGTaGTCGCCTGCCCAGGATGAC +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQATGASE*SPAQDD
Trigger: GTCATCCTGGGCAGGCGAGCACTCTGAGGCCCCAGT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGGTGGCATCCAGGGTTaGGTGCCCGGCTTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: FQGACFSPHACISWPQGLGGIQG*VPGLRP
Trigger: AGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGAACTCTGGCCACCTTaGGGCTGGCCTAGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAELWPP*GWPSQA
Trigger: GGCCTGACTAGGCCAGCCCCAAGGTGGCCAGAGTTC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGGGTGGCATCCAGGGTTaGGTGCCCGGCTTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWGGIQG*VPGLRP
Trigger: AGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACC...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGCGGGCGAGGCCATCTaGGACCAGCCAGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDAGEAI*DQPVPS
Trigger: GCTGGGGACTGGCTGGTCTCAGATGGCCTCGCCCGC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACGGGGGAGGAGGCGCCTaGTGCCAGCTTTCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHGGGGA*CQLSSG
Trigger: ACCAGAGGAAAGCTGGCAGCAGGCGCCTCCTCCCCC...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGACTGGGGCCTCAGAGTaGTCGCCTGCCCAGGATGAC +
Preference number: 2 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQTGASE*SPAQDD
Trigger: GTCATCCTGGGCAGGCGAGCACTCTGAGGCCCCAGT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGCCCGGCTTGAGGCCTaGGGCAGCGATGCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDARLEA*GSDALH
Trigger: GTGAAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTCTGGCTGGGATGCGTTaGGGGAGGAGGCGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RQGQTGCVSPDANFLLIALAGMR*GRRRLL
Trigger: CAGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAG...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCACCTGCAGAGGACATaGCACTGGCTGGGATGCGTT +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAHLQRT*HWLGCV
Trigger: AACGCATCCCAGCCAGTGCCATGTCCTCTGCAGGTG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGTGGCTGCTGGGAGATaGTACAGGGCAGAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAVAAGR*YRAEAE
Trigger: TTCTGCCTCTGCCCTGTACCATCTCCCAGCAGCCAC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGCTTCCCGGTGGAGTTTaGGCACTGCCCAAAGCCTCC +
Preference number: 2 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQLPGGV*ALPKAS
Trigger: GGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAG...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGGCCTGGGGCAGCGATaGCCTTCACCTGCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDGLGQR*PSPAGG
Trigger: GCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCCCCTTCACCTGCTGGTaGCCATTGCTCCTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPPFTCW*PLLLSG
Trigger: GCCTGACAGGAGCAATGGCCACCAGCAGGTGAAGGG...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCAGACTGGGAGGCTGGTaGGAGGACAACGTCCAAATG +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQARLGGW*EDNVQM
Trigger: CATTTGGACGTTGTCCTCCCACCAGCCTCCCAGTCT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCAAATGTCTAGACGGGTaGCCCAAGACAGGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAKCLDG*PKTGAD
Trigger: GTCTGCCCCTGTCTTGGGCCACCCGTCTAGACATTT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp GACAGGCAGGAGGGCTGCTCAGTGAGAGAGACTTCCCGGTGGAGTTaGAGCACTGCCCAAAGCCTCCACCCTCTACCAAAACATGGAGCC +
Preference number: 2 (lower is better)
Translates to: DRQEGCSVRETSRWS*STAQSLHPLPKHGA
Trigger: GGCTCCATGTTTTGGTAGAGGGTGGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTCCTGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCTTTTGGCTCAGGTATaGAGCCAGAACTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQALLAQV*SQNSGH
Trigger: GTGGCCAGAGTTCTGGCTTCATACCTGAGCCAAAAG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCAAGCCTATTTCTGGGTaGTGCCCTCCCACAGCTCCA +
Preference number: 2 (lower is better)
Translates to: FQGACFSPHACISWPQGLKPISG*CPPTAP
Trigger: TGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTT...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGAGCAGGAGGAGTACGTaGCAGGCCTGGAACAAAGCC +
Preference number: 2 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQSRRST*QAWNKA
Trigger: GGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCCCTTCACCTGCTGGTaGCCATTGCTCCTGTCAGGC +
Preference number: 2 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHPFTCW*PLLLSG
Trigger: GCCTGACAGGAGCAATGGCCACCAGCAGGTGAAGGG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAATGCCCTTCACCTGCTaGTGGCCATTGCTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPMPFTC*WPLLLS
Trigger: TGACAGGAGCAATGGCCACCAGCAGGTGAAGGGCAT...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTTCCTCTGGTACCCGCTaGGGGGTGGCATCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDASSGTR*GVASRV
Trigger: AACCCTGGATGCCACCCCCCAGCGGGTACCAGAGGA...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGAGCAGTCGGAGGGTCTaGGAGACTTCTCAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQSSRRV*ETSQRW
Trigger: CCACCTCTGAGAAGTCTCCCAGACCCTCCGACTGCT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGGCCCCAGCAGAGCTTaGGAATATCAAAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAGPSRA*EYQSTE
Trigger: CTCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGTGGCCACCTTGGGGCTaGCCTAGTCAGGCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQWPPWG*PSQAPA
Trigger: TGCTGGGGCCTGACTAGGCCAGCCCCAAGGTGGCCA...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCTGTTGCGCAGCGGAATaGATGTTTTTGCTGCCCCGA +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQACCAAE*MFLLPR
Trigger: TCGGGGCAGCAAAAACATCCATTCCGCTGCGCAACA...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATGTTGGGTGCCCGGCTTaGGGCCTGGGGCAGCGATGC +
Preference number: 2 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYVGCPA*GLGQRC
Trigger: GCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAAC...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGCGATGCCCTTCACCTaGTGGTGGCCATTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAAMPFT*WWPLLL
Trigger: CAGGAGCAATGGCCACCAGCAGGTGAAGGGCATCGC...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCGGAGGAGGCGCCTGCTaGCAGCTTTCCTCTGGTACC +
Preference number: 2 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELGGGAC*QLSSGT
Trigger: GGTACCAGAGGAAAGCTGGCAGCAGGCGCCTCCTCC...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGTACGCTCTATTCCTTaGTACCAAACCTGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: FQGACFSPHACISWPQGLVRSIP*YQTCPE
Trigger: CTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTAC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGGGAGGGGAGGTAGTATaGGGAAACCCCTGTGCTCTA +
Preference number: 2 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWGGEVV*GNPCAL
Trigger: TAGAGCACAGGGGTTTCCCCATACTACCTCCCCTCC...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTAGCCTGGGAGTGTCCTaGGGAGGGGAGGTAGTATGG +
Preference number: 2 (lower is better)
Translates to: RQGQTGCVSPDANFLLIASLGVS*GGEVVW
Trigger: CCATACTACCTCCCCTCCCCAGGACACTCCCAGGCT...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGCAGAGGCAGAAGACTaGGAGGCTGGTGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSAEAED*EAGGRT
Trigger: TGTCCTCCCACCAGCCTCCCAGTCTTCTGCCTCTGC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGAAATGTCTAGACGGGTaGCCCAAGACAGGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWKCLDG*PKTGAD
Trigger: GTCTGCCCCTGTCTTGGGCCACCCGTCTAGACATTT...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACCATGCCTGCATCTCATaGCCTCAGGGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDHACIS*PQGLSL
Trigger: GAGGCTGAGGCCCTGAGGCCATGAGATGCAGGCATG...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTCCAGGGTCATCAACCTaGCTGGCAGCAACAGGGGGA +
Preference number: 2 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAPGSST*LAATGG
Trigger: TCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGG...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGCCGGGATATCTTCATaGGAAAACACAAACCATCCC +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAAGISS*ENTNHP
Trigger: GGGATGGTTTGTGTTTTCTCATGAAGATATCCCGGC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGCAGCAGCTTCGTCCTaGGCGGCTATTTCCCAGGTA +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDAAASS*AAISQV
Trigger: TACCTGGGAAATAGCCGCTCAGGACGAAGCTGCTGC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCAGGAGGGCTGCTCAGTaGGAGAGACTTCCCGGTGGA +
Preference number: 2 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELRRAAQ*ERLPGG
Trigger: TCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTCCT...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCTCCACCATGGGCTCTTaGCAAATCTCTACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: FQGACFSPHACISWPQGLSTMGS*QISTLS
Trigger: GGAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGGA...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATGGCCTGGGGCAGCGATaGCCTTCACCTGCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYGLGQR*PSPAGG
Trigger: GCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCC...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGCCAGTAACTCCACCTaGAGAGGACATGGCACTGGC +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDASNST*RGHGTG
Trigger: GCCAGTGCCATGTCCTCTGCAGGTGGAGTTACTGGC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAAGCAGGAGGAGTACGTaGCAGGCCTGGAACAAAGCC +
Preference number: 2 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSSRRST*QAWNKA
Trigger: GGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGACAGGCAGGAGGGCTaGTCAGTGAGAGAGACTTCC +
Preference number: 2 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSDRQEG*SVRETS
Trigger: GGAAGTCTCTCTCACTGAGCAGCCCTCCTGCCTGTC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCTACTCTCTCCCTGCTaGCCAGGGTCCATGGCAAGC +
Preference number: 2 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQLLSPC*PGSMAS
Trigger: GCTTGCCATGGACCCTGGGCAGCAGGGAGAGAGTAG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGGAAGGGCATGTGTATaGACTGTTAGAAGCCAACCT +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAGRACV*TVRSQP
Trigger: AGGTTGGCTTCTAACAGTGCATACACATGCCCTTCC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGAGCCTGGGAGTGTCCTaGGGAGGGGAGGTAGTATGG +
Preference number: 2 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQSLGVS*GGEVVW
Trigger: CCATACTACCTCCCCTCCCCAGGACACTCCCAGGCT...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGAGACTTCTCAGAGGTaGCGACACCACAGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDETSQR*RHHSSS
Trigger: GCTGCTGCTGTGGTGTCGCCACCTCTGAGAAGTCTC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGAGCACAGAGCTACACTaGGGCCTCAGAGTGCTCGCC +
Preference number: 2 (lower is better)
Translates to: MASVRQFLLCSQTVAGLESTELH*GLRVLA
Trigger: GGCGAGCACTCTGAGGCCCCAGTGTAGCTCTGTGCT...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTGGCCCCAGCAGAGCTTaGGAATATCAAAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPGPSRA*EYQSTE
Trigger: CTCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCC...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCCTCGCCTGCCCAGGATaGCAGGCAGGAGGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSLACPG*QAGGLL
Trigger: GAGCAGCCCTCCTGCCTGTCATCCTGGGCAGGCGAG...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCTTTCAAGATGGCTGTaGGGATCACAAATGAGGCTT +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQALSRWL*GSQMRL
Trigger: AAGCCTCATTTGTGATCCTCACAGCCATCTTGAAAG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGCCTTGCTACCAAACCTaGCCGGAGTGTGAAGAACTT +
Preference number: 2 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQPCYQT*PECEEL
Trigger: AAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGG...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCAGGGGCAGACAGGCTaGGTGTCTCCGGATGCAAAC +
Preference number: 2 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEQGQTG*VSPDAN
Trigger: GTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCCTAGACCAGCTTTTTaGTTGGCAGAGGGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQPRPAF*LAEGPG
Trigger: TCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCTAGG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCACACTAAGGTCCAGATaGATCAGTATTAGGCACCCT +
Preference number: 2 (lower is better)
Translates to: TCPGSSTWLAATGGKSQATLRSR*ISIRHP
Trigger: AGGGTGCCTAATACTGATCCATCTGGACCTTAGTGT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCTCGCCTGCCCAGGATaGCAGGCAGGAGGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLACPG*QAGGLL
Trigger: GAGCAGCCCTCCTGCCTGTCATCCTGGGCAGGCGAG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTGGGGGAGGAGGCGCCTaGTGCCAGCTTTCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGGGGGA*CQLSSG
Trigger: ACCAGAGGAAAGCTGGCAGCAGGCGCCTCCTCCCCC...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTGTACGCTCTATTCCTTaGTACCAAACCTGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAVRSIP*YQTCPE
Trigger: CTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTAC...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCAGCATATGACCCGGTaGCAGCATGACCAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDQHMTR*QHDQAK
Trigger: CTTTGCCTGGTCATGCTGGCACCGGGTCATATGCTG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGGAGGGGAGGTAGTATaGGGAAACCCCTGTGCTCTA +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDGGEVV*GNPCAL
Trigger: TAGAGCACAGGGGTTTCCCCATACTACCTCCCCTCC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGCAGAGGCAGAAGACTaGGAGGCTGGTGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLAEAED*EAGGRT
Trigger: TGTCCTCCCACCAGCCTCCCAGTCTTCTGCCTCTGC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCTGGATCCATTCATTGTaGGGAATGAAGGGGGAAGTA +
Preference number: 2 (lower is better)
Translates to: FQGACFSPHACISWPQGLWIHSL*GMKGEV
Trigger: TACTTCCCCCTTCATTCCCCACAATGAATGGATCCA...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACAGAGAGACTTCCCGGTaGAGTTTGAGCACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDRETSR*SLSTAQ
Trigger: TTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTTGGGTCTGTTATAGCTaGCTCTCGCCTTCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAWVCYS*LSPSGQ
Trigger: TTGCCCAGAAGGCGAGAGCCAGCTATAACAGACCCA...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTTCTGGAGTTCCAGGATaGGACTCTCGTTCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDASGVPG*DSRSPC
Trigger: ACAGGGAGAACGAGAGTCCCATCCTGGAACTCCAGA...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCATGCAAACTTCCTACTaGTTGCTGTCACTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPMQTSY*LLSLEY
Trigger: GTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCAT...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACCTGACCCTCAAGCTCTaGAACGTTGAGTTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDLTLKL*NVEFLS
Trigger: ACTGAGGAACTCAACGTTTCAGAGCTTGAGGGTCAG...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATTCCCTGTCCAGCATATaGCCCGGTGCCAGCATGACC +
Preference number: 2 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYSLSSI*PGASMT
Trigger: GGTCATGCTGGCACCGGGTCATATGCTGGACAGGGA...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTGCGATGCCCTTCACCTaGTGGTGGCCATTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: ALQAAATKSSELASEMSPAMPFT*WWPLLL
Trigger: CAGGAGCAATGGCCACCAGCAGGTGAAGGGCATCGC...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATCAGGGGCAGACAGGCTaGGTGTCTCCGGATGCAAAC +
Preference number: 2 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYQGQTG*VSPDAN
Trigger: GTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTG...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCTGTTTCTCACCCCATaGCTGCATCTCATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQLFLTP*LHLMAS
Trigger: TGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGCAGGCCCTATGGCCATaGTCTACCACTTCTTGGAAC +
Preference number: 2 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEQALWP*STTSWN
Trigger: GTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTG...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGCAGAGGACATGGCACTaGCTGGGATGCGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLQRTWH*LGCVGG
Trigger: TCCCCCAACGCATCCCAGCCAGTGCCATGTCCTCTG...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCCCAGCAAGATGCTCATaGGCCAGCATATCCAACCCT +
Preference number: 2 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELPARCS*ASISNP
Trigger: AGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGG...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTAATCCCGCAGTTCACTaGACCAGGGTAGGTACTTGT +
Preference number: 2 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDANPAVH*TRVGTC
Trigger: ACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATT...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCCCTCTACCAAAACATaGAGCCAAAGCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDPSTKT*SQSPGG
Trigger: TCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCTTGAAGGAACCCGGCTaGTTGTTAGAGAACAAATGT +
Preference number: 2 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPLKEPG*LLENKC
Trigger: ACATTTGTTCTCTAACAATCAGCCGGGTTCCTTCAA...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCTAAGTGGCCACATATaGATCCCGCAGTTCACTGGA +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDLSGHI*IPQFTG
Trigger: TCCAGTGAACTGCGGGATTCATATGTGGCCACTTAG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGAGAAGCCTTTTGATTTaGCTAAGCTGGGCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: MASVRQFLLCSQTVAGLERSLLI*LSWAKA
Trigger: GGCCTTGGCCCAGCTTAGTCAAATCAAAAGGCTTCT...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCCTTATGGGCCAAGGTaGGTAGAGCTGATGCCTGCT +
Preference number: 2 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLPYGPR*VELMPA
Trigger: AGCAGGCATCAGCTCTACTCACCTTGGCCCATAAGG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTGACCCGGTGCCAGCATaGCCAGGCAAAGCCTTATGG +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGDPVPA*PGKALW
Trigger: CCATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTC...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCAGCCAGTCCCCAGCTaGTCTGCCAGCTCACTTCAG +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGQPVPS*SASSLQ
Trigger: CTGAAGTGAGCTGGCAGATCAGCTGGGGACTGGCTG...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCATGGGGAAACCCCTGTaGTCTACCCTCTGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVMGKPL*STLWPG
Trigger: CCCAGGCCAGAGGGTAGAGCACAGGGGTTTCCCCAT...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGAAGCCTATTTCTGGGTaGTGCCCTCCCACAGCTCCA +
Preference number: 2 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLKPISG*CPPTAP
Trigger: TGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATTTCCTCAGTAAAGCATaGTTGGGTAGGACCTGCAGC +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDFLSKA*LGRTCS
Trigger: GCTGCAGGTCCTACCCAAGCATGCTTTACTGAGGAA...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGATGCCCTTCACCTGCTaGTGGCCATTGCTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLMPFTC*WPLLLS
Trigger: TGACAGGAGCAATGGCCACCAGCAGGTGAAGGGCAT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGCACCTGCAGAGGACATaGCACTGGCTGGGATGCGTT +
Preference number: 2 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLHLQRT*HWLGCV
Trigger: AACGCATCCCAGCCAGTGCCATGTCCTCTGCAGGTG...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCCAGCAAGATGCTCATaGGCCAGCATATCCAACCCT +
Preference number: 2 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEPARCS*ASISNP
Trigger: AGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGGTCTTGACCTACTATaGGGTAAACCAAGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDGLDLL*GKPSGS
Trigger: TGACCCACTTGGTTTACCCCATAGTAGGTCAAGACC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGAGACTGGGAGGCTGGTaGGAGGACAACGTCCAAATG +
Preference number: 2 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLRLGGW*EDNVQM
Trigger: CATTTGGACGTTGTCCTCCCACCAGCCTCCCAGTCT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGGTGGCTGCTGGGAGATaGTACAGGGCAGAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLVAAGR*YRAEAE
Trigger: TTCTGCCTCTGCCCTGTACCATCTCCCAGCAGCCAC...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCCTCAGCCTCCACCATaGGCTCTTGACAAATCTCTA +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDPQPPP*ALDKSL
Trigger: TAGAGATTTGTCAAGAGCCCATGGTGGAGGCTGAGG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGAAAGATGTGGGTACATaGATGGGTGAAGTATGTTCC +
Preference number: 2 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQKDVGT*MGEVCS
Trigger: GGAACATACTTCACCCATCCATGTACCCACATCTTT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGTGGGTCACAACTGCTTaGCACTTCAGCCAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEWVTTA*HFSQQD
Trigger: ATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCA...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCTAAGTGGCCACATATaGATCCCGCAGTTCACTGGA +
Preference number: 2 (lower is better)
Translates to: RREQAIKEQSEGLGDFSELSGHI*IPQFTG
Trigger: TCCAGTGAACTGCGGGATTCATATGTGGCCACTTAG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAGCCAGTAACTCCACCTaGAGAGGACATGGCACTGGC +
Preference number: 2 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKASNST*RGHGTG
Trigger: GCCAGTGCCATGTCCTCTGCAGGTGGAGTTACTGGC...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTACTTCAGCCAGCAAGATaGTCATGGGCCAGCATATCC +
Preference number: 2 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLLQPAR*SWASIS
Trigger: GGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAG...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACAAACTTCCTACTGATTaGTGTCACTGGAGTACGCTC +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDKLPTD*CHWSTL
Trigger: GAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATCCTATTTCTGGGTGCTaGCCTCCCACAGCTCCATAC +
Preference number: 2 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYPISGC*PPTAPY
Trigger: GTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGG...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGACAGGCAGGAGGGCTaGTCAGTGAGAGAGACTTCC +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSDRQEG*SVRETS
Trigger: GGAAGTCTCTCTCACTGAGCAGCCCTCCTGCCTGTC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCTGTTTCTCACCCCATaGCTGCATCTCATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLLFLTP*LHLMAS
Trigger: TGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCAGGCTCTGGGGGCAGTaGCTAGTGCTATTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVRLWGQ*LVLLCP
Trigger: AGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCAGAGGACATGGCACTaGCTGGGATGCGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRQRTWH*LGCVGG
Trigger: TCCCCCAACGCATCCCAGCCAGTGCCATGTCCTCTG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCAATCCTTTTAAGAGCTaGGAAAGACCAGACTTAGAA +
Preference number: 2 (lower is better)
Translates to: FQGACFSPHACISWPQGLNPFKS*ERPDLE
Trigger: TTCTAAGTCTGGTCTTTCCCAGCTCTTAAAAGGATT...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGGCTGTAGACCGGGTTaGTTTGAAATGGGGAGTTTT +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDGCRPG*FEMGSF
Trigger: AAAACTCCCCATTTCAAACCAACCCGGTCTACAGCC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCATGAAGCCAGAACTCTaGCCACCTTGGGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSMKPEL*PPWGWP
Trigger: AGGCCAGCCCCAAGGTGGCCAGAGTTCTGGCTTCAT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp AAGGTCTTGACCTACTATGGGGTAAACCAAGTGGGTCACAACTGCTaGACACTTCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAAC +
Preference number: 2 (lower is better)
Translates to: KVLTYYGVNQVGHNC*TLQPARCSWASISN
Trigger: GTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTGGTTTACCCCATAGTAGGTCAAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp AAAGCCCAGGAGGAAGCTTCCCTGGAGGCTGTAGACCGGGTTGGTTaGAAATGGGGAGTTTTCAATAAGGATTCCAGCAGATCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: KAQEEASLEAVDRVG*KWGVFNKDSSRSAN
Trigger: GTTTGCAGATCTGCTGGAATCCTTATTGAAAACTCCCCATTTCAAACCAACCCGGTCTACAGCCTCCAGGGAAGCTTCCTCCTGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTAGCTCTTCAGGGAGATaGGGCACTCCTTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGSSSGR*GTPCRP
Trigger: AGGTCTGCAAGGAGTGCCTCATCTCCCTGAAGAGCT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCAGCTCTTCAGGGAGATaGGGCACTCCTTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVSSSGR*GTPCRP
Trigger: AGGTCTGCAAGGAGTGCCTCATCTCCCTGAAGAGCT...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGATTGTGCCCTCAGTGTaGGGTTCATTCAGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEIVPSV*GSFSSK
Trigger: TTTAGAGCTGAATGAACCTCACACTGAGGGCACAAT...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATAAACTTCCTACTGATTaGTGTCACTGGAGTACGCTC +
Preference number: 2 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDKLPTD*CHWSTL
Trigger: GAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTT...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCCCTATTTCTGGGTGCTaGCCTCCCACAGCTCCATAC +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVPISGC*PPTAPY
Trigger: GTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGG...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTGAACACAGCCCAAACTaGCAAGCCACTCACTCAGGA +
Preference number: 2 (lower is better)
Translates to: ALQAAATKSSELASEMSPEHSPN*QATHSG
Trigger: TCCTGAGTGAGTGGCTTGGCAGTTTGGGCTGTGTTC...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTTGTTAGCCAAGCCTTaGTCTCCTTTTGGGGATTCT +
Preference number: 2 (lower is better)
Translates to: MASVRQFLLCSQTVAGLELLAKP*SPFGDS
Trigger: AGAATCCCCAAAAGGAGAGCAAGGCTTGGCTAACAA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGACCAGCTTTTTGGTTaGCAGAGGGGCCGGGATATC +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSDQLFG*QRGRDI
Trigger: GATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCCTAGACCAGCTTTTTaGTTGGCAGAGGGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRPRPAF*LAEGPG
Trigger: TCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCTAGG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTAGAGAAGGTAGAGACTaGCAGACTCTAGAATCCTTT +
Preference number: 2 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAREGRD*QTLESF
Trigger: AAAGGATTCTAGAGTCTGCCAGTCTCTACCTTCTCT...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCAGAAACAGGAGAGGCTaGAGTAAGCAGGATCTTACA +
Preference number: 2 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELRNRRG*SKQDLT
Trigger: TGTAAGATCCTGCTTACTCCAGCCTCTCCTGTTTCT...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGACTGATTGCTGTCACTaGAGTACGCTCTATTCCTTG +
Preference number: 2 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQTDCCH*STLYSL
Trigger: CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGT...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATCGAGACCAGCCTAAGTaGCCACATATGAATCCCGCA +
Preference number: 2 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYRDQPK*PHMNPA
Trigger: TGCGGGATTCATATGTGGCCACTTAGGCTGGTCTCG...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGGAACTCTGGCCACCTTaGGGCTGGCCTAGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILELWPP*GWPSQA
Trigger: GGCCTGACTAGGCCAGCCCCAAGGTGGCCAGAGTTC...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACTTCTCTTGCGGTTTTTaGAACTCAGCCATGATGTCT +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDFSCGF*NSAMMS
Trigger: AGACATCATGGCTGAGTTCCAAAAACCGCAAGAGAA...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACAAAACCAAGGATGCCTaGCTCAGAATCTTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDKTKDA*LRIFCS
Trigger: AGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp GGATATCTTCATGAGAAAACACAAACCATCCCATCTCAGAACAGGTaGGGATCCAATCTCTTTATTGTCAGGGTCCCCTCCCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: GYLHEKTQTIPSQNR*GSNLFIVRVPSLWP
Trigger: GGGCCACAGGGAGGGGACCCTGACAATAAAGAGATTGGATCCCAACCTGTTCTGAGATGGGATGGTTTGTGTTTTCTCATGAAGATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp CCTCAGTGTGAGGTTCATTCAGCTCTAAATCCCATTCTTTGGACTTaGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCA +
Preference number: 2 (lower is better)
Translates to: PQCEVHSALNPILWT*PKFQSRLAAVPHVS
Trigger: TGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGGGATTTAGAGCTGAATGAACCTCACACTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp AACCTGGCCAGGGATGGCAAATACCTGACGCTCACGTGCCCACACTaGAATTCCATGCTCATAAGAGAAACTGCCAAACTATCATGTCAG +
Preference number: 2 (lower is better)
Translates to: NLARDGKYLTLTCPH*NSMLIRETAKLSCQ
Trigger: CTGACATGATAGTTTGGCAGTTTCTCTTATGAGCATGGAATTCAAGTGTGGGCACGTGAGCGTCAGGTATTTGCCATCCCTGGCCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGGCAGGAAAGGGGTGGTaGCAAGAAACAGGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRAGKGW*QETGEA
Trigger: AGCCTCTCCTGTTTCTTGTCACCACCCCTTTCCTGC...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCTTGAAGGAACCCGGCTaGTTGTTAGAGAACAAATGT +
Preference number: 2 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELLKEPG*LLENKC
Trigger: ACATTTGTTCTCTAACAATCAGCCGGGTTCCTTCAA...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTATTAGCAGTACACAATaGGCATGTATAAGCAGCACA +
Preference number: 2 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAISSTQ*ACISST
Trigger: TGTGCTGCTTATACATGCTCATTGTGTACTGCTAAT...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCACAGATCTGCAAACTTTaGTCAACACGTAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSQICKL*STRKDG
Trigger: TCCATCTTTACGTGTTGATCAAAGTTTGCAGATCTG...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACACAACAGTCAGTAACTaGACAAAGGCCCATTTACTA +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDTTVSN*TKAHLL
Trigger: TAGTAAATGGGCCTTTGTTCAGTTACTGACTGTTGT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCCTTCAGCCAGCAAGATaGTCATGGGCCAGCATATCC +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVLQPAR*SWASIS
Trigger: GGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAG...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTTTCCTCAGTAAAGCATaGTTGGGTAGGACCTGCAGC +
Preference number: 2 (lower is better)
Translates to: ALQAAATKSSELASEMSPFLSKA*LGRTCS
Trigger: GCTGCAGGTCCTACCCAAGCATGCTTTACTGAGGAA...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGGATGAAAACCAAGGATaGCTGGCTCAGAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEDENQG*LAQNLL
Trigger: CAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATC...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGCTGGCTGGGATGCGTTaGGGGAGGAGGCGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLLAGMR*GRRRLL
Trigger: CAGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAG...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGAGAAACAGGAGAGGCTaGAGTAAGCAGGATCTTACA +
Preference number: 2 (lower is better)
Translates to: RREQAIKEQSEGLGDFSERNRRG*SKQDLT
Trigger: TGTAAGATCCTGCTTACTCCAGCCTCTCCTGTTTCT...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTAATCCCGCAGTTCACTaGACCAGGGTAGGTACTTGT +
Preference number: 2 (lower is better)
Translates to: ALQAAATKSSELASEMSPNPAVH*TRVGTC
Trigger: ACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATT...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCTCAGTAAAGCATGCTTaGGTAGGACCTGCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSSVKHA*VGPAAG
Trigger: GCCTGCTGCAGGTCCTACCCAAGCATGCTTTACTGA...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTATCCAGGGGCTTTTCTaGAGTTCCAGGATGGGACTC +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGIQGLF*SSRMGL
Trigger: GAGTCCCATCCTGGAACTCCAGAAAAGCCCCTGGAT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGATGCAAACTTCCTACTaGTTGCTGTCACTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLMQTSY*LLSLEY
Trigger: GTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCAT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCCAGATCTGCAAACTTTaGTCAACACGTAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELQICKL*STRKDG
Trigger: TCCATCTTTACGTGTTGATCAAAGTTTGCAGATCTG...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTTTTGGAACTCAGCCATaGTGTCTAGAATCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: ALQAAATKSSELASEMSPFGTQP*CLESWV
Trigger: GACCCAGGATTCTAGACATCATGGCTGAGTTCCAAA...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAACAAGTGGGTCACAACTaGTTGACACTTCAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKQVGHN*LTLQPA
Trigger: TGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTG...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGACGTTTCAGAAAGACTaGGTGGCTGCTGGGAGATGG +
Preference number: 2 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRTFQKD*VAAGRW
Trigger: CCATCTCCCAGCAGCCACGCAGTCTTTCTGAAACGT...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCCCTTGCTACCAAACCTaGCCGGAGTGTGAAGAACTT +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVPCYQT*PECEEL
Trigger: AAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGG...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATGGAAGGGCATGTGTATaGACTGTTAGAAGCCAACCT +
Preference number: 2 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYGRACV*TVRSQP
Trigger: AGGTTGGCTTCTAACAGTGCATACACATGCCCTTCC...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCAATGGATGTTTTTGCTaGCCCGACTCAGAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVNGCFC*PDSEEG
Trigger: CCCTTCCTCTGAGTCGGGGCAGCAAAAACATCCATT...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCTGGCCAAGCATGGATTaGGGCTTTTGGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSWPSMD*GFWLRY
Trigger: ATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCA...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGATCCAGGGGCTTTTCTaGAGTTCCAGGATGGGACTC +
Preference number: 2 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRIQGLF*SSRMGL
Trigger: GAGTCCCATCCTGGAACTCCAGAAAAGCCCCTGGAT...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACATCACCATCTCCTTCTaGAGTTTTCAGATGTTAGAA +
Preference number: 2 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDITISF*SFQMLE
Trigger: TTCTAACATCTGAAAACTCCAGAAGGAGATGGTGAT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCAACCTGCCCGGAGTGTaGAGAACTTGTGTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSNLPGV*RTCVFC
Trigger: ACAAAACACACAAGTTCTTCACACTCCGGGCAGGTT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCAACCTGCCCGGAGTGTaGAGAACTTGTGTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVNLPGV*RTCVFC
Trigger: ACAAAACACACAAGTTCTTCACACTCCGGGCAGGTT...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCTGACCCTCAAGCTCTaGAACGTTGAGTTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLTLKL*NVEFLS
Trigger: ACTGAGGAACTCAACGTTTCAGAGCTTGAGGGTCAG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCCATTCTTTGGACTTTaGCCAAGTTCCAATCCAGGC +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGPFFGL*PSSNPG
Trigger: GCCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGG...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGACACTAAGGTCCAGATaGATCAGTATTAGGCACCCT +
Preference number: 2 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLTLRSR*ISIRHP
Trigger: AGGGTGCCTAATACTGATCCATCTGGACCTTAGTGT...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGGTCTTGACCTACTATaGGGTAAACCAAGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSGLDLL*GKPSGS
Trigger: TGACCCACTTGGTTTACCCCATAGTAGGTCAAGACC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCATGGATTGGGGCTTTTaGCTCAGGTATGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSMDWGF*LRYEAR
Trigger: TCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCAT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTACGGTTCTCCAAGCCTaGCATACTAAGGAAGCCTAT +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGTVLQA*HTKEAY
Trigger: ATAGGCTTCCTTAGTATGCCAGGCTTGGAGAACCGT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTCCCACCCAAGGGCCTaGCTGTGTGCTTTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLSHPRA*LCAFPG
Trigger: CCCTGGGAAAGCACACAGCCAGGCCCTTGGGTGGGA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp GCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTaGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: AQNLLLCFAFSISVV*SDRPTAYNILWGRL
Trigger: TAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGCTTCCCGGTGGAGTTTaGGCACTGCCCAAAGCCTCC +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLLPGGV*ALPKAS
Trigger: GGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAG...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTATTGTGCCCTCAGTGTaGGGTTCATTCAGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGIVPSV*GSFSSK
Trigger: TTTAGAGCTGAATGAACCTCACACTGAGGGCACAAT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGGACCCGGTGCCAGCATaGCCAGGCAAAGCCTTATGG +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLDPVPA*PGKALW
Trigger: CCATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTC...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGAGAGAGACTTCCCGGTaGAGTTTGAGCACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILRETSR*SLSTAQ
Trigger: TTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCT...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGGGCAATGGCCAAGCATaGATTGGGGCTTTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILGNGQA*IGAFGS
Trigger: TGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGTGGGTCTGTTATAGCTaGCTCTCGCCTTCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILWVCYS*LSPSGQ
Trigger: TTGCCCAGAAGGCGAGAGCCAGCTATAACAGACCCA...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGCCAGGCAAAGCCTTATaGGCCAAGGTGAGTAGAGCT +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILPGKAL*AKVSRA
Trigger: AGCTCTACTCACCTTGGCCCATAAGGCTTTGCCTGG...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGCAAGTGGGTCACAACTaGTTGACACTTCAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILQVGHN*LTLQPA
Trigger: TGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTG...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGCTGCGTGTCTCCGGATaGAAACTTCCTACTGATTGC +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILLRVSG*KLPTDC
Trigger: GCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAG...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR GCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGATGAAAACCAAGGATaGCTGGCTCAGAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: IDITTQWMPVFVSQALLSDENQG*LAQNLL
Trigger: CAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGATGAAGCCAGAACTCTaGCCACCTTGGGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLMKPEL*PPWGWP
Trigger: AGGCCAGCCCCAAGGTGGCCAGAGTTCTGGCTTCAT...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTATTAGCAGTACACAATaGGCATGTATAAGCAGCACA +
Preference number: 2 (lower is better)
Translates to: RMPGSESFALLCLLYFCGISSTQ*ACISST
Trigger: TGTGCTGCTTATACATGCTCATTGTGTACTGCTAAT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAAAAACATCTAAAGACTaGTCCTTTAGGCAGAATCCG +
Preference number: 2 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKKTSKD*SFRQNP
Trigger: CGGATTCTGCCTAAAGGATCAGTCTTTAGATGTTTT...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGGACCAGCTTTTTGGTTaGCAGAGGGGCCGGGATATC +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLDQLFG*QRGRDI
Trigger: GATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTC...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAACGGGTTGGTTTGAAATaGGGAGTTTTCAATAAGGAT +
Preference number: 2 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKRVGLK*GVFNKD
Trigger: ATCCTTATTGAAAACTCCCCATTTCAAACCAACCCG...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGCTGGCTCTCGCCTTCTaGGCAAGGAAAGATGTGGGT +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLLALAF*ARKDVG
Trigger: ACCCACATCTTTCCTTGCCCAGAAGGCGAGAGCCAG...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCCTAAATCCCATTCTTTaGACTTTGCCCAAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: PGSESFALLCLLYFCGLVLNPIL*TLPKFQ
Trigger: TTGGAACTTGGGCAAAGTCCAAAGAATGGGATTTAG...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGACTGATTGCTGTCACTaGAGTACGCTCTATTCCTTG +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILTDCCH*STLYSL
Trigger: CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGT...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTCAGTAAAGCATGCTTaGGTAGGACCTGCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLSVKHA*VGPAAG
Trigger: GCCTGCTGCAGGTCCTACCCAAGCATGCTTTACTGA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTGGGTCACAACTGCTTaGCACTTCAGCCAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLWVTTA*HFSQQD
Trigger: ATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 90 bp TGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTaGATTTGCCTAAAACCTCAATCAATCAATGATCTGGTTGGGATG +
Preference number: 2 (lower is better)
Translates to: WRKFIMKNLATGGGI*ICLKPQSINDLVGM
Trigger: CATCCCAACCAGATCATTGATTGATTGAGGTTTTAGGCAAATCAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCCGGGATATCTTCATaGGAAAACACAAACCATCCC +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLAGISS*ENTNHP
Trigger: GGGATGGTTTGTGTTTTCTCATGAAGATATCCCGGC...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR TCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGTATTTCCAAACAGTCTaGAAATTGCTGCAGATCCTC +
Preference number: 2 (lower is better)
Translates to: LLWRKFIMKNLATGGGILYFQTV*KLLQIL
Trigger: GAGGATCTGCAGCAATTTTCAGACTGTTTGGAAATA...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGATGGATTGGGGCTTTTaGCTCAGGTATGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLMDWGF*LRYEAR
Trigger: TCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCAT...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGAGAGAAGGTAGAGACTaGCAGACTCTAGAATCCTTT +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLREGRD*QTLESF
Trigger: AAAGGATTCTAGAGTCTGCCAGTCTCTACCTTCTCT...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGAAAACCAAGGATGCCTaGCTCAGAATCTTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLKTKDA*LRIFCS
Trigger: AGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTT...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTaGGGCAGCGATGCCCTTCACCTGCTGGTGGCCATT +
Preference number: 3 (lower is better)
Translates to: GWHPGLGARLEA*GSDALHLLVAI
Trigger: AATGGCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAGGGTGGCATCCAGGGTaGGGTGCCCGGCTTGAGGCC +
Preference number: 3 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPGWHPG*GARLEA
Trigger: GGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCACTGGCTGGGATGCGTaGGGGGAGGAGGCGCCTGCT +
Preference number: 3 (lower is better)
Translates to: TCPGSSTWLAATGGKSQATGWDA*GEEAPA
Trigger: AGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAGT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GGTCAGCCTGCTAGATGCTGGAACGTGTGGCCCAGTTaGCCAGCCAACCACCTGACAGGCGGGCGAGGCCAT +
Preference number: 3 (lower is better)
Translates to: GQPARCWNVWPS*PANHLTGGRGH
Trigger: ATGGCCTCGCCCGCCTGTCAGGTGGTTGGCTGGGCAACTGGGCCACACGTTCCAGCATCTAGCAGGCTGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAACTGGCTGGGATGCGTaGGGGGAGGAGGCGCCTGCT +
Preference number: 3 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPTGWDA*GEEAPA
Trigger: AGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAGT...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTGGTTGGGTGCCCGGCTaGAGGCCTGGGGCAGCGATG +
Preference number: 3 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAGWVPG*RPGAAM
Trigger: CATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACC...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp AAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGTaGCGACACCACAGCAGCAGCTTCGTCCTGAGCGGC +
Preference number: 3 (lower is better)
Translates to: KSSRRVWETSQR*RHHSSSFVLSG
Trigger: GCCGCTCAGGACGAAGCTGCTGCTGTGGTGTCGCCACCTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGCGGAATGGATGTTTTaGCTGCCCCGACTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAAEWMF*LPRLRG
Trigger: TCCTCTGAGTCGGGGCAGCAAAAACATCCATTCCGC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTaGCCTCCCACAGCTCCATACCAACGAGACCAGCCT +
Preference number: 3 (lower is better)
Translates to: RARPGTKPISGC*PPTAPYQRDQP
Trigger: AGGCTGGTCTCGTTGGTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTaGCAGCATGACCAGGCAAAGCCTTATGGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: GTLVLPVQHMTR*QHDQAKPYGPR
Trigger: CCTTGGCCCATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGGGTTGGGTGCCCGGCTaGAGGCCTGGGGCAGCGATG +
Preference number: 3 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLGWVPG*RPGAAM
Trigger: CATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACC...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTACTTCCCGGTGGAGTTaGAGCACTGCCCAAAGCCTC +
Preference number: 3 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPTSRWS*STAQSL
Trigger: GAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAGT...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGGAACGTGTGGCCCAGTaGCCCAGCCAACCACCTGAC +
Preference number: 3 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEERVAQ*PSQPPD
Trigger: GTCAGGTGGTTGGCTGGGCAACTGGGCCACACGTTC...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTaGTGCCCTCCCACAGCTCCATACCAACGAGACCAG +
Preference number: 3 (lower is better)
Translates to: VRARPGTKPISG*CPPTAPYQRDQ
Trigger: CTGGTCTCGTTGGTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GCCATGATGTCTAGAATCCTGGGTCAGCCTGCTAGATaGTGGAACGTGTGGCCCAGTTGCCCAGCCAACCAC +
Preference number: 3 (lower is better)
Translates to: AMMSRILGQPAR*WNVWPSCPANH
Trigger: GTGGTTGGCTGGGCAACTGGGCCACACGTTCCAGCATCTAGCAGGCTGACCCAGGATTCTAGACATCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp CACAACTGCTTGACACTTCAGCCAGCAAGATGCTCATaGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: HNCLTLQPARCS*ASISNPPQWPH
Trigger: GTGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp CAGCTGAACATGTACACGTGGCCTCTCTGTGTGGCCTaGGCTGCTTCACAGCATGGTGGTTGGGTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: QLNMYTWPLCVA*AASQHGGWVPR
Trigger: TCTTGGGACCCAACCACCATGCTGTGAAGCAGCCCAGGCCACACAGAGAGGCCACGTGTACATGTTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGATCCAATCTCTTTATaGTCAGGGTCCCCTCCCTGT +
Preference number: 3 (lower is better)
Translates to: FQGACFSPHACISWPQGLDPISL*SGSPPC
Trigger: ACAGGGAGGGGACCCTGACAATAAAGAGATTGGATC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACAGACCAGCTTTTTGGTaGGCAGAGGGGCCGGGATAT +
Preference number: 3 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHRPAFW*AEGPGY
Trigger: ATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCT...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCGTGGGTCACAACTGCTaGACACTTCAGCCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPVGHNC*TLQPAR
Trigger: TCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCAC...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTAGTACGCTCTATTCCTaGCTACCAAACCTGCCCGGA +
Preference number: 3 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPSTLYS*LPNLPG
Trigger: TCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACT...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTAGGCCCCAGCAGAGCTaGGGAATATCAAAGCACAGA +
Preference number: 3 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPRPQQS*GISKHR
Trigger: TCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCCT...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp CTCAGAGGTGGCGACACCACAGCAGCAGCTTCGTCCTaGGCGGCTATTTCCCAGGTAGAGAAAGTAGGAGCA +
Preference number: 3 (lower is better)
Translates to: LRGGDTTAAASS*AAISQVEKVGA
Trigger: TGCTCCTACTTTCTCTACCTGGGAAATAGCCGCTCAGGACGAAGCTGCTGCTGTGGTGTCGCCACCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp TCCAGGATGGGACTCTCGTTCTCCCTGTCCAGCATATaGCCCGGTGCCAGCATGACCAGGCAAAGCCTTATG +
Preference number: 3 (lower is better)
Translates to: SRMGLSFSLSSI*PGASMTRQSLM
Trigger: CATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GTGGGTCACAACTGCTTGACACTTCAGCCAGCAAGATaGTCATGGGCCAGCATATCCAACCCTCCCCAGTGG +
Preference number: 3 (lower is better)
Translates to: VGHNCLTLQPAR*SWASISNPPQW
Trigger: CCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GCAGGGAAGGGATACGTTTCAGAAAGACTGCGTGGCTaGTGGGAGATGGTACAGGGCAGAGGCAGAAGACTG +
Preference number: 3 (lower is better)
Translates to: AGKGYVSERLRG*WEMVQGRGRRL
Trigger: CAGTCTTCTGCCTCTGCCCTGTACCATCTCCCAGCAGCCACGCAGTCTTTCTGAAACGTATCCCTTCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CCCAAGACAGGGGCAGACAGGCTGCGTGTCTCCGGATaGAAACTTCCTACTGATTGCTGTCACTGGAGTACG +
Preference number: 3 (lower is better)
Translates to: PKTGADRLRVSG*KLPTDCCHWST
Trigger: CGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp CCTCCCACAGCTCCATACCAACGAGACCAGCCTAAGTaGCCACATATGAATCCCGCAGTTCACTGGACCAGG +
Preference number: 3 (lower is better)
Translates to: PPTAPYQRDQPK*PHMNPAVHWTR
Trigger: CCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCACTTAGGCTGGTCTCGTTGGTATGGAGCTGTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp AGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTaGGTGCTGCCCTCCCACAGCTCCATACCAACGAGA +
Preference number: 3 (lower is better)
Translates to: RSTCQAWNKAYF*VLPSHSSIPTR
Trigger: TCTCGTTGGTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp GGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTaGGAGACTTCTCAGAGGTGGCGACACCACAGCAGC +
Preference number: 3 (lower is better)
Translates to: GENRQLKSSRRV*ETSQRWRHHSS
Trigger: GCTGCTGTGGTGTCGCCACCTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp CTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTaGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: LVRKKTCPGSST*LAATGGKSQAS
Trigger: AGAGGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CTGCAGCAGGCATATAGCACTAGGCTCTGGGGGCAGTaGCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCAT +
Preference number: 3 (lower is better)
Translates to: LQQAYSTRLWGQ*LVLLCPQCEVH
Trigger: ATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCTAGTGCTATATGCCTGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CCCTCTGTCCCTCTATTCTCACAGGCCCTATGGCCATaGTCTACCACTTCTTGGAACCTGCCCGAAAACCAG +
Preference number: 3 (lower is better)
Translates to: PSVPLFSQALWP*STTSWNLPENQ
Trigger: CTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGTGAGAATAGAGGGACAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp TTAGGCAGGGAAGGGATACGTTTCAGAAAGACTGCGTaGCTGCTGGGAGATGGTACAGGGCAGAGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: LGREGIRFRKTA*LLGDGTGQRQK
Trigger: CTTCTGCCTCTGCCCTGTACCATCTCCCAGCAGCCACGCAGTCTTTCTGAAACGTATCCCTTCCCTGCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATaGCAAATACCTGACGCTCACGTGCCCACACTTGAA +
Preference number: 3 (lower is better)
Translates to: AGYDLTGQPGQG*QIPDAHVPTLE
Trigger: TTCAAGTGTGGGCACGTGAGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACAGGCCCCAGCAGAGCTaGGGAATATCAAAGCACAGA +
Preference number: 3 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDRPQQS*GISKHR
Trigger: TCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCCT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp GATGTAGGGTTTGTGTCAGGGGCAGGAAAGGGGTGGTaGCAAGAAACAGGAGAGGCTGGAGTAAGCAGGATC +
Preference number: 3 (lower is better)
Translates to: DVGFVSGAGKGW*QETGEAGVSRI
Trigger: GATCCTGCTTACTCCAGCCTCTCCTGTTTCTTGTCACCACCCCTTTCCTGCCCCTGACACAAACCCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp TGCCAGCATGACCAGGCAAAGCCTTATGGGCCAAGGTaGGTAGAGCTGATGCCTGCTACCCTTGAAGGTATC +
Preference number: 3 (lower is better)
Translates to: CQHDQAKPYGPR*VELMPATLEGI
Trigger: GATACCTTCAAGGGTAGCAGGCATCAGCTCTACTCACCTTGGCCCATAAGGCTTTGCCTGGTCATGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp ATCTGCCAGCTCACTTCAGCCACACGAGGGCCCAGATaGGATAAGAACCACCACACTGAACACAGCCCAAAC +
Preference number: 3 (lower is better)
Translates to: ICQLTSATRGPR*DKNHHTEHSPN
Trigger: GTTTGGGCTGTGTTCAGTGTGGTGGTTCTTATCTCATCTGGGCCCTCGTGTGGCTGAAGTGAGCTGGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp CCATGCCTGGCTAACCGGATTCTCGATGGCAGCTTTTaGACCCAAGTCCCCATGTCTGAAGATCCCTGGACT +
Preference number: 3 (lower is better)
Translates to: PCLANRILDGSF*TQVPMSEDPWT
Trigger: AGTCCAGGGATCTTCAGACATGGGGACTTGGGTTCAAAAGCTGCCATCGAGAATCCGGTTAGCCAGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GATTTTAGGCAGGGAAGGGATACGTTTCAGAAAGACTaGGTGGCTGCTGGGAGATGGTACAGGGCAGAGGCA +
Preference number: 3 (lower is better)
Translates to: DFRQGRDTFQKD*VAAGRWYRAEA
Trigger: TGCCTCTGCCCTGTACCATCTCCCAGCAGCCACGCAGTCTTTCTGAAACGTATCCCTTCCCTGCCTAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CCATGGGCTCTTGACAAATCTCTACTCTCTCCCTGCTaGCCAGGGTCCATGGCAAGCAAATATATGGGGACC +
Preference number: 3 (lower is better)
Translates to: PWALDKSLLSPC*PGSMASKYMGT
Trigger: GGTCCCCATATATTTGCTTGCCATGGACCCTGGGCAGCAGGGAGAGAGTAGAGATTTGTCAAGAGCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CCACCATGGGCTCTTGACAAATCTCTACTCTCTCCCTaGTGCCCAGGGTCCATGGCAAGCAAATATATGGGG +
Preference number: 3 (lower is better)
Translates to: PPWALDKSLLSP*CPGSMASKYMG
Trigger: CCCCATATATTTGCTTGCCATGGACCCTGGGCAGCAGGGAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp CTCTGTGTGGCCTGGGCTGCTTCACAGCATGGTGGTTaGGTCCCAAGAGCTAGAGTCCCAAGAGATAATAAG +
Preference number: 3 (lower is better)
Translates to: LCVAWAASQHGG*VPRARVPRDNK
Trigger: CTTATTATCTCTTGGGACTCTAGCTCTTGGGACCCAACCACCATGCTGTGAAGCAGCCCAGGCCACACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGGTGGGTCACAACTGCTaGACACTTCAGCCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEVGHNC*TLQPAR
Trigger: TCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCAC...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp TGGGCCAAGGTGAGTAGAGCTGATGCCTGCTACCCTTaGAGGTATCTTCCCTGCTTTTCTCACGGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: WAKVSRADACYP*RYLPCFSHGSP
Trigger: TGGAGAACCGTGAGAAAAGCAGGGAAGATACCTTCAAGGGTAGCAGGCATCAGCTCTACTCACCTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp CCTCTCTCATGTCTGACATTTGATACTGCTGTCAGCTaGACATGTACACGTGGCCTCTCTGTGTGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: PLSCLTFDTAVS*TCTRGLSVWPG
Trigger: CCCAGGCCACACAGAGAGGCCACGTGTACATGTTCAGCTGACAGCAGTATCAAATGTCAGACATGAGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp ATGACAACTGTTGCGCAGCGGAATGGATGTTTTTGCTaGCCCGACTCAGAGGAAGGGCATGTGTATGCACTG +
Preference number: 3 (lower is better)
Translates to: MTTVAQRNGCFC*PDSEEGHVYAL
Trigger: CAGTGCATACACATGCCCTTCCTCTGAGTCGGGGCAGCAAAAACATCCATTCCGCTGCGCAACAGTTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTTTCTCTCTTGGGAACTaGAACATGGGGAAAATGGAT +
Preference number: 3 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPFSLGN*NMGKMD
Trigger: ATCCATTTTCCCCATGTTCAAGTTCCCAAGAGAGAA...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGTTCTCTCTTGGGAACTaGAACATGGGGAAAATGGAT +
Preference number: 3 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWFSLGN*NMGKMD
Trigger: ATCCATTTTCCCCATGTTCAAGTTCCCAAGAGAGAA...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACTTTGTTAGCCAAGCCTaGCTCTCCTTTTGGGGATTC +
Preference number: 3 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDFVSQA*LSFWGF
Trigger: GAATCCCCAAAAGGAGAGCAAGGCTTGGCTAACAAA...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGATCCAATCTCTTTATaGTCAGGGTCCCCTCCCTGT +
Preference number: 3 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEDPISL*SGSPPC
Trigger: ACAGGGAGGGGACCCTGACAATAAAGAGATTGGATC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCCATCTCAGAACAGGTaGGGATCCAATCTCTTTATT +
Preference number: 3 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHPSQNR*GSNLFI
Trigger: AATAAAGAGATTGGATCCCAACCTGTTCTGAGATGG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTTGAATTTTTCTGTGTaGGGGGAAGGCTTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: MASVRQFLLCSQTVAGLELNFSV*GEGFQR
Trigger: CCTCTGGAAGCCTTCCCCCAACACAGAAAAATTCAA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGCTTCTCTTGCGGTTTTaGGAACTCAGCCATGATGTC +
Preference number: 3 (lower is better)
Translates to: MASVRQFLLCSQTVAGLELLLRF*ELSHDV
Trigger: GACATCATGGCTGAGTTCCAAAAACCGCAAGAGAAG...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp AGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTaGTTGCTGTCACTGGAGTACGCTCTATTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: RQAACLRMQTSY*LLSLEYALFLA
Trigger: AGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp CTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTaGGGTTCATTCAGCTCTAAATCCCATTCTTTGGAC +
Preference number: 3 (lower is better)
Translates to: LGAVPSAIVPSV*GSFSSKSHSLD
Trigger: GTCCAAAGAATGGGATTTAGAGCTGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp AGGCCTACTGCATATAACATCCTATGGGGCAGGTTATaGCCTTACGGGTCAACCTGGCCAGGGATGGCAAAT +
Preference number: 3 (lower is better)
Translates to: RPTAYNILWGRL*PYGSTWPGMAN
Trigger: ATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp TTGACCTACTATGGGGTAAACCAAGTGGGTCACAACTaGTTGACACTTCAGCCAGCAAGATGCTCATGGGCC +
Preference number: 3 (lower is better)
Translates to: LTYYGVNQVGHN*LTLQPARCSWA
Trigger: GGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTGGTTTACCCCATAGTAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp AGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTaGTGTCACTGGAGTACGCTCTATTCCTTGCTACCA +
Preference number: 3 (lower is better)
Translates to: RLRVSGCKLPTD*CHWSTLYSLLP
Trigger: TGGTAGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp GTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACTaGAGTACGCTCTATTCCTTGCTACCAAACCTGCCC +
Preference number: 3 (lower is better)
Translates to: VSGCKLPTDCCH*STLYSLLPNLP
Trigger: GGGCAGGTTTGGTAGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp TCGCCTTCTGGGCAAGGAAAGATGTGGGTACATGGATaGGTGAAGTATGTTCCACTGAGAGCTCTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SPSGQGKMWVHG*VKYVPLRALQG
Trigger: TCCCTGAAGAGCTCTCAGTGGAACATACTTCACCCATCCATGTACCCACATCTTTCCTTGCCCAGAAGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp GCTCTCGCCTTCTGGGCAAGGAAAGATGTGGGTACATaGATGGGTGAAGTATGTTCCACTGAGAGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: ALAFWARKDVGT*MGEVCSTESSS
Trigger: TGAAGAGCTCTCAGTGGAACATACTTCACCCATCCATGTACCCACATCTTTCCTTGCCCAGAAGGCGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp AGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTaGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATG +
Preference number: 3 (lower is better)
Translates to: SEAVLTLFSDGG*AGVILKPSSLM
Trigger: CATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTAGACCAGCTTTTTGGTaGGCAGAGGGGCCGGGATAT +
Preference number: 3 (lower is better)
Translates to: RMPGSESFALLCLLYFCGRPAFW*AEGPGY
Trigger: ATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGAAAGAGATAAGGTCTaGACCTACTATGGGGTAAAC +
Preference number: 3 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDERDKV*TYYGVN
Trigger: GTTTACCCCATAGTAGGTCAAGACCTTATCTCTTTC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCCCATTCTTTGGACTTaGCCCAAGTTCCAATCCAGG +
Preference number: 3 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLPILWT*PKFQSR
Trigger: CCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGGG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCCTCAGTAAAGCATGCTaGGGTAGGACCTGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: PGSESFALLCLLYFCGLVLSKAC*GRTCSR
Trigger: CCTGCTGCAGGTCCTACCCAAGCATGCTTTACTGAG...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp GCATGTATAAGCAGCACACGTTTGAAGGAACCCGGCTaGTTGTTAGAGAACAAATGTCTAGACGGGTGGCCC +
Preference number: 3 (lower is better)
Translates to: ACISSTRLKEPG*LLENKCLDGWP
Trigger: GGGCCACCCGTCTAGACATTTGTTCTCTAACAATCAGCCGGGTTCCTTCAAACGTGTGCTGCTTATACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp CCAAGAGCTAAGGGCAGTAATGACTTGCCAGGGTATTaGAATGGGTCTGTTATAGCTGGCTCTCGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: PRAKGSNDLPGY*NGSVIAGSRLL
Trigger: CAGAAGGCGAGAGCCAGCTATAACAGACCCATTTCAATACCCTGGCAAGTCATTACTGCCCTTAGCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp GGCTTGTCTTCTCTTGCGGTTTTTGGAACTCAGCCATaGTGTCTAGAATCCTGGGTCAGCCTGCTAGATGCT +
Preference number: 3 (lower is better)
Translates to: GLSSLAVFGTQP*CLESWVSLLDA
Trigger: AGCATCTAGCAGGCTGACCCAGGATTCTAGACATCATGGCTGAGTTCCAAAAACCGCAAGAGAAGACAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTaGTACCAAACCTGCCCGGAGTGTGAAGAACTTGTG +
Preference number: 3 (lower is better)
Translates to: LLIAVTGVRSIP*YQTCPECEELV
Trigger: CACAAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp AACCTGGCCAGGGATGGCAAATACCTGACGCTCACGTaGCCACACTTGAATTCCATGCTCATAAGAGAAACT +
Preference number: 3 (lower is better)
Translates to: NLARDGKYLTLT*PHLNSMLIRET
Trigger: AGTTTCTCTTATGAGCATGGAATTCAAGTGTGGGCACGTGAGCGTCAGGTATTTGCCATCCCTGGCCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp CACTCGCATACTGGGCTTGTCTTCTCTTGCGGTTTTTaGAACTCAGCCATGATGTCTAGAATCCTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: HSHTGLVFSCGF*NSAMMSRILGQ
Trigger: CTGACCCAGGATTCTAGACATCATGGCTGAGTTCCAAAAACCGCAAGAGAAGACAAGCCCAGTATGCGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCGAAAGAGATAAGGTCTaGACCTACTATGGGGTAAAC +
Preference number: 3 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELERDKV*TYYGVN
Trigger: GTTTACCCCATAGTAGGTCAAGACCTTATCTCTTTC...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTAGTACGCTCTATTCCTaGCTACCAAACCTGCCCGGA +
Preference number: 3 (lower is better)
Translates to: RMPGSESFALLCLLYFCGSTLYS*LPNLPG
Trigger: TCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGTTGAATTTTTCTGTGTaGGGGGAAGGCTTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLLNFSV*GEGFQR
Trigger: CCTCTGGAAGCCTTCCCCCAACACAGAAAAATTCAA...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCATGGCCAAGCATGGATaGGGGCTTTTGGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: IDITTQWMPVFVSQALLSMAKHG*GLLAQV
Trigger: TACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCAT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCATGGCCAAGCATGGATaGGGGCTTTTGGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: PGSESFALLCLLYFCGLVMAKHG*GLLAQV
Trigger: TACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCAT...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATTCAAGCTCTGAAACGTaGAGTTCCTCAGTAAAGCAT +
Preference number: 3 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDSSSET*SSSVKH
Trigger: ATGCTTTACTGAGGAACTCAACGTTTCAGAGCTTGA...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTACTAAAAGTTCTGAGTaGGCAAGTGAAATGAGTCCT +
Preference number: 3 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDATKSSE*ASEMSP
Trigger: AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGT...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp TTATCTCTCATGGTGCTGGGCTTTGAATGGCATCAGTaGGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: LSLMVLGFEWHQ*GSSYFVLRRWL
Trigger: CAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCATTCAAAGCCCAGCACCATGAGAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GTCACTGGAGTACGCTCTATTCCTTGCTACCAAACCTaGCCGGAGTGTGAAGAACTTGTGTGTTTTGTGAGA +
Preference number: 3 (lower is better)
Translates to: VTGVRSIPCYQT*PECEELVCFVR
Trigger: TCTCACAAAACACACAAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACTCCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp CCTCAAGAGCACTCGCATACTGGGCTTGTCTTCTCTTaGGGTTTTTGGAACTCAGCCATGATGTCTAGAATC +
Preference number: 3 (lower is better)
Translates to: PQEHSHTGLVFS*GFWNSAMMSRI
Trigger: GATTCTAGACATCATGGCTGAGTTCCAAAAACCGCAAGAGAAGACAAGCCCAGTATGCGAGTGCTCTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp AGATGGATCAGTATTAGGCACCCTAGACCAGCTTTTTaGTTGGCAGAGGGGCCGGGATATCTTCATGAGAAA +
Preference number: 3 (lower is better)
Translates to: RWISIRHPRPAF*LAEGPGYLHEK
Trigger: TTTCTCATGAAGATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCTAGGGTGCCTAATACTGATCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTTAAGGCTACTAAATTaGGGGGTGGTTTGTTATACA +
Preference number: 3 (lower is better)
Translates to: MASVRQFLLCSQTVAGLELRLLN*GVVCYT
Trigger: TGTATAACAAACCACCCCCAAATTTAGTAGCCTTAA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp GTCATCTTGAAGCCTTCCTCTCTCATGTCTGACATTTaGTACTGCTGTCAGCTGAACATGTACACGTGGCCT +
Preference number: 3 (lower is better)
Translates to: VILKPSSLMSDI*YCCQLNMYTWP
Trigger: AGGCCACGTGTACATGTTCAGCTGACAGCAGTATCAAATGTCAGACATGAGAGAGGAAGGCTTCAAGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATCCATCTCAGAACAGGTaGGGATCCAATCTCTTTATT +
Preference number: 3 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYPSQNR*GSNLFI
Trigger: AATAAAGAGATTGGATCCCAACCTGTTCTGAGATGG...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGTAGACCGGGTTGGTTaGAAATGGGGAGTTTTCAAT +
Preference number: 3 (lower is better)
Translates to: IDITTQWMPVFVSQALLSVDRVG*KWGVFN
Trigger: ATTGAAAACTCCCCATTTCAAACCAACCCGGTCTAC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp ATGAAGGGGGAAGTAGGTGACATTAGCAGTACACAATaGGCATGTATAAGCAGCACACGTTTGAAGGAACCC +
Preference number: 3 (lower is better)
Translates to: MKGEVGDISSTQ*ACISSTRLKEP
Trigger: GGGTTCCTTCAAACGTGTGCTGCTTATACATGCTCATTGTGTACTGCTAATGTCACCTACTTCCCCCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp TCTCGATGGCAGCTTTTGAACCCAAGTCCCCATGTCTaGAGATCCCTGGACTTTACAATTTGTGAGCCAATA +
Preference number: 3 (lower is better)
Translates to: SRWQLLNPSPHV*RSLDFTICEPI
Trigger: TATTGGCTCACAAATTGTAAAGTCCAGGGATCTTCAGACATGGGGACTTGGGTTCAAAAGCTGCCATCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GGGATGAAAACCAAGGATGCCTGGCTCAGAATCTTTTaGTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGT +
Preference number: 3 (lower is better)
Translates to: GMKTKDAWLRIF*SALPSLFLWSC
Trigger: ACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp AACTATCATGTCAGTATTTCCAAACAGTCTGAAAATTaGTGCAGATCCTCAAAAGGCACTCCAGGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: NYHVSISKQSEN*CRSSKGTPGSC
Trigger: GCAGCTGCCTGGAGTGCCTTTTGAGGATCTGCAGCAATTTTCAGACTGTTTGGAAATACTGACATGATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp ATCAATGATCTGGTTGGGATGAAAACCAAGGATGCCTaGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTA +
Preference number: 3 (lower is better)
Translates to: INDLVGMKTKDA*LRIFCSALPSL
Trigger: TAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATCCCAACCAGATCATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTTTTTTGATGATGGGATaGAATTTTTCTGTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: ALQAAATKSSELASEMSPFLMMG*NFSVLG
Trigger: CCCCAACACAGAAAAATTCAATCCCATCATCAAAAA...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGCTGGCTCAGAATCTTTaGCTCTGCTTTGCCTTCTCT +
Preference number: 3 (lower is better)
Translates to: LLWRKFIMKNLATGGGILLAQNL*LCFAFS
Trigger: AGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAG...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp CAGTCAGTAACTGAACAAAGGCCCATTTACTATCCCTaGTCCAGATCAACCTCTCATTTTACAGCTGAGGAA +
Preference number: 3 (lower is better)
Translates to: QSVTEQRPIYYP*SRSTSHFTAEE
Trigger: TTCCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTTGTTCAGTTACTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp ACTGCCAAACTATCATGTCAGTATTTCCAAACAGTCTaGAAATTGCTGCAGATCCTCAAAAGGCACTCCAGG +
Preference number: 3 (lower is better)
Translates to: TAKLSCQYFQTV*KLLQILKRHSR
Trigger: CCTGGAGTGCCTTTTGAGGATCTGCAGCAATTTTCAGACTGTTTGGAAATACTGACATGATAGTTTGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp GTGCCCACACTTGAATTCCATGCTCATAAGAGAAACTaGCAAACTATCATGTCAGTATTTCCAAACAGTCTG +
Preference number: 3 (lower is better)
Translates to: VPTLEFHAHKRN*QTIMSVFPNSL
Trigger: CAGACTGTTTGGAAATACTGACATGATAGTTTGGCAGTTTCTCTTATGAGCATGGAATTCAAGTGTGGGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR GCA 72 bp ATGAAGAATCTGGCTACTGGTGGAGGGATTTTGATTTaGCTAAAACCTCAATCAATCAATGATCTGGTTGGG +
Preference number: 3 (lower is better)
Translates to: MKNLATGGGILI*LKPQSINDLVG
Trigger: CCCAACCAGATCATTGATTGATTGAGGTTTTAGGCAAATCAAAATCCCTCCACCAGTAGCCAGATTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR TCA 72 bp AAACAACGTTTTATTATCTCTCATGGTGCTGGGCTTTaGATGGCATCAGTGAGGCAGTTCTTACTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: KQRFIISHGAGL*MASVRQFLLCS
Trigger: AGAACAAAGTAAGAACTGCCTCACTGATGCCATTCAAAGCCCAGCACCATGAGAGATAATAAAACGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CCA 72 bp ATCTACAAAATCTATAGAATAGACATAACCACACAGTaGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: IYKIYRIDITTQ*MPVFVSQALLS
Trigger: GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTATTCTATAGATTTTGTAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR-3UTR CAA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGGTAGACCGGGTTGGTTaGAAATGGGGAGTTTTCAAT +
Preference number: 3 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLVDRVG*KWGVFN
Trigger: ATTGAAAACTCCCCATTTCAAACCAACCCGGTCTAC...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTTTGATGTCCAGGGTCTaGCCGGCCAGCACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALLMSRV*PASTRP
Trigger: TGGGCGGGTGCTGGCCGGGCAGACCCTGGACATCAA...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTTGGCCACCTTGGGGCTaGCCTAGTCAGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALWPPWG*PSQAPA
Trigger: TGCTGGGGCCTGACTAGGCCAGCCCCAAGGTGGCCA...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTGGAGGAGGCGCCTGCTaGCAGCTTTCCTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALGGGAC*QLSSGT
Trigger: GGTACCAGAGGAAAGCTGGCAGCAGGCGCCTCCTCC...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGACCGCCCTGGGCACTaGCACGGGCGACAGACGGCC +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQADRPGH*HGRQTA
Trigger: GGCCGTCTGTCGCCCGTGCCAGTGCCCAGGGCGGTC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCTTCCCGGTGGAGTTTaGGCACTGCCCAAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALLPGGV*ALPKAS
Trigger: GGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCCGCGCCGAGAGGTCTaGAGGAAGCCGCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPPRREV*RKPRGW
Trigger: CCAGCCGCGCGGCTTCCTCCAGACCTCTCGGCGCGG...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCACCGCCGCTCCGGCCCTaGTTCCGGGCTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPPPLRP*FRALLL
Trigger: AAGGAGGAGAGCCCGGAACCAGGGCCGGAGCGGCGG...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375114.7
CDS-3UTR GCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCGTCGTCTCGGGTCCGTaGTTCCCCCTGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPVVSGP*FPLGQA
Trigger: GGCCTGCCCCAGGGGGAAGCACGGACCCGAGACGAC...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGGTGGCATCCAGGGTTaGGTGCCCGGCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAGGIQG*VPGLRP
Trigger: AGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTAGACTGGGAGGCTGGTaGGAGGACAACGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALRLGGW*EDNVQM
Trigger: CATTTGGACGTTGTCCTCCCACCAGCCTCCCAGTCT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTAAATGTCTAGACGGGTaGCCCAAGACAGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALKCLDG*PKTGAD
Trigger: GTCTGCCCCTGTCTTGGGCCACCCGTCTAGACATTT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCACTGGTGGCCGGCTGCTaGCACCGCCACCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSLVAGC*HRHRHH
Trigger: GTGGTGGCGGTGGCGGTGGCAGCAGCCGGCCACCAG...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGGGCCTGGGGCAGCGATaGCCTTCACCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWGLGQR*PSPAGG
Trigger: GCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCC...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCTGTTTCTCACCCCATaGCTGCATCTCATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALLFLTP*LHLMAS
Trigger: TGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCTCACAGGGACCGCCCTaGGCACTGGCACGGGCGACA +
Preference number: 4 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPSQGPP*ALARAT
Trigger: TGTCGCCCGTGCCAGTGCCCAGGGCGGTCCCTGTGA...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCCAGGCAAAGCCTTATaGGCCAAGGTGAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALPGKAL*AKVSRA
Trigger: AGCTCTACTCACCTTGGCCCATAAGGCTTTGCCTGG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTTTCTCAGACGGTGGCTaGGCTGGAGTCATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALFSDGG*AGVILK
Trigger: CTTCAAGATGACTCCAGCCCAGCCACCGTCTGAGAA...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCACTGCTCTTTAACTTaGTCTTGGCTGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALHCSLT*SWLSWW
Trigger: CCACCAGCTCAGCCAAGATCAAGTTAAAGAGCAGTG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGTTGGGTGCCCGGCTTaGGGCCTGGGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDVGCPA*GLGQRC
Trigger: GCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAAC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCAGGAGGGCTGCTCAGTaGGAGAGACTTCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQARRAAQ*ERLPGG
Trigger: TCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTCCT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCTGGGAAGGACACGGTaGCACGAGCACGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQALGRTR*HEHEES
Trigger: AGACTCCTCGTGCTCGTGTCACCGTGTCCTTCCCAG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375114.7
CDS-3UTR GCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAACTGGGGCCTCAGAGTaGTCGCCTGCCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPTGASE*SPAQDD
Trigger: GTCATCCTGGGCAGGCGAGCACTCTGAGGCCCCAGT...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGCGGCGGGAAGAGGCTaGGCACACGCGCGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDAAGRG*AHARES
Trigger: CGACTCCCGCGCGTGTGCCCAGCCTCTTCCCGCCGC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCTTCTTCTTGCCATCTaGATTGGCCTTTTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALLLLAI*IGLLLR
Trigger: GCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCCCTTCACCTGCTGGTaGCCATTGCTCCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAPFTCW*PLLLSG
Trigger: GCCTGACAGGAGCAATGGCCACCAGCAGGTGAAGGG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTAATCCCGCAGTTCACTaGACCAGGGTAGGTACTTGT +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALNPAVH*TRVGTC
Trigger: ACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTTGCTCTACCACTTCTTaGAACCTGCCCGAAAACCAG +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALCSTTS*NLPENQ
Trigger: CTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCA...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCCTTACTACACCTACTaGGGGTGGTTGTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALPYYTY*GWLWRL
Trigger: TAATCTCCACAACCACCCTCAGTAGGTGTAGTAAGG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGACAGGCAGGAGGGCTaGTCAGTGAGAGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQADRQEG*SVRETS
Trigger: GGAAGTCTCTCTCACTGAGCAGCCCTCCTGCCTGTC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCCTACTCTCTCCCTGCTaGCCAGGGTCCATGGCAAGC +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLLLSPC*PGSMAS
Trigger: GCTTGCCATGGACCCTGGGCAGCAGGGAGAGAGTAG...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCATCACCCAGGCTGGAGTaGAGCGGCAGGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPSPRLE*SGRIMA
Trigger: AGCCATGATCCTGCCGCTGCACTCCAGCCTGGGTGA...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGCGGCGGGAAGAGGCTaGGCACACGCGCGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEAAGRG*AHARES
Trigger: CGACTCCCGCGCGTGTGCCCAGCCTCTTCCCGCCGC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGCGTGGCCTCTCTGTGTaGCCTGGGCTGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWRGLSV*PGLLHS
Trigger: GCTGTGAAGCAGCCCAGGCCACACAGAGAGGCCACG...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGTTGGGTGCCCGGCTTaGGGCCTGGGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEVGCPA*GLGQRC
Trigger: GCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAAC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGCAGCAGCTTCGTCCTaGGCGGCTATTTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLAAASS*AAISQV
Trigger: TACCTGGGAAATAGCCGCTCAGGACGAAGCTGCTGC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCCTCGCCTGCCCAGGATaGCAGGCAGGAGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELLACPG*QAGGLL
Trigger: GAGCAGCCCTCCTGCCTGTCATCCTGGGCAGGCGAG...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCAGCTCTTCAGGGAGATaGGGCACTCCTTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQASSSGR*GTPCRP
Trigger: AGGTCTGCAAGGAGTGCCTCATCTCCCTGAAGAGCT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTTCCCTGTCCAGCATATaGCCCGGTGCCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPSLSSI*PGASMT
Trigger: GGTCATGCTGGCACCGGGTCATATGCTGGACAGGGA...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACGGAAGGAGGCGGTACTaGCGCACTCGGGGACGTAAG +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHGRRRY*RTRGRK
Trigger: CTTACGTCCCCGAGTGCGGCAGTACCGCCTCCTTCC...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCTCTCCCAGCACAGCTaGCCGGGCATGGCGCTCATT +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHLSQHS*PGMALI
Trigger: AATGAGCGCCATGCCCGGGCAGCTGTGCTGGGAGAG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGGGGGAGGAGGCGCCTaGTGCCAGCTTTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSGGGGA*CQLSSG
Trigger: ACCAGAGGAAAGCTGGCAGCAGGCGCCTCCTCCCCC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGATGGGGAAACCCCTGTaGTCTACCCTCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWMGKPL*STLWPG
Trigger: CCCAGGCCAGAGGGTAGAGCACAGGGGTTTCCCCAT...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTAAACTTCCTACTGATTaGTGTCACTGGAGTACGCTC +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALKLPTD*CHWSTL
Trigger: GAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGCAGGGGCAGACAGGCTaGGTGTCTCCGGATGCAAAC +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWQGQTG*VSPDAN
Trigger: GTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTG...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGTGGAGTTTGAGCACTaGCCAAAGCCTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAVEFEH*PKPPPS
Trigger: AGAGGGTGGAGGCTTTGGGCAGTGCTCAAACTCCAC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTACCGCGCCGAGAGGTCTaGAGGAAGCCGCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLPRREV*RKPRGW
Trigger: CCAGCCGCGCGGCTTCCTCCAGACCTCTCGGCGCGG...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCTCACAGGGACCGCCCTaGGCACTGGCACGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELSQGPP*ALARAT
Trigger: TGTCGCCCGTGCCAGTGCCCAGGGCGGTCCCTGTGA...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGTCCGTGCTTCCCCCTaGGGCAGGCCTGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSVRASP*GRPASE
Trigger: TTCTGAGGCAGGCCTGCCCCAGGGGGAAGCACGGAC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCCAGAGGACATGGCACTaGCTGGGATGCGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPQRTWH*LGCVGG
Trigger: TCCCCCAACGCATCCCAGCCAGTGCCATGTCCTCTG...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGAGCCTGGGAGTGTCCTaGGGAGGGGAGGTAGTATGG +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQSLGVS*GGEVVW
Trigger: CCATACTACCTCCCCTCCCCAGGACACTCCCAGGCT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTAGAAACAGGAGAGGCTaGAGTAAGCAGGATCTTACA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALRNRRG*SKQDLT
Trigger: TGTAAGATCCTGCTTACTCCAGCCTCTCCTGTTTCT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCCTTCTCTATTTCTGTaGTCTTGTCAGACAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALPSLFL*SCQTGL
Trigger: TAGGCCTGTCTGACAAGACCACAGAAATAGAGAAGG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGGACCAAAGGGACTGTaGCCCGGGGTCGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSGPKGL*PGVASQ
Trigger: CTGTGAAGCGACCCCGGGTCACAGTCCCTTTGGTCC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGGCGGGCGAGGCCATCTaGGACCAGCCAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLAGEAI*DQPVPS
Trigger: GCTGGGGACTGGCTGGTCTCAGATGGCCTCGCCCGC...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTTTCCTCTCTCATGTCTaGCATTTGATACTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALFLSHV*HLILLS
Trigger: TGACAGCAGTATCAAATGTCAGACATGAGAGAGGAA...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTCTCTCCCAGCACAGCTaGCCGGGCATGGCGCTCATT +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIALSQHS*PGMALI
Trigger: AATGAGCGCCATGCCCGGGCAGCTGTGCTGGGAGAG...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGTTGATGTCCAGGGTCTaGCCGGCCAGCACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQLMSRV*PASTRP
Trigger: TGGGCGGGTGCTGGCCGGGCAGACCCTGGACATCAA...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACGCGATGCCCTTCACCTaGTGGTGGCCATTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHAMPFT*WWPLLL
Trigger: CAGGAGCAATGGCCACCAGCAGGTGAAGGGCATCGC...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGGGGGAGGAGGCGCCTaGTGCCAGCTTTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDGGGGA*CQLSSG
Trigger: ACCAGAGGAAAGCTGGCAGCAGGCGCCTCCTCCCCC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCAGTCTGAAAATTGCTaGAGATCCTCAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALQSENC*RSSKGT
Trigger: AGTGCCTTTTGAGGATCTGCAGCAATTTTCAGACTG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGTCCGCGTCTGTGTCCTaGCTGTGTTCCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWSASVS*LCSSSS
Trigger: GGAAGAGCTGGAACACAGCCAGGACACAGACGCGGA...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAGGAGGGGAGGTAGTATaGGGAAACCCCTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPGGEVV*GNPCAL
Trigger: TAGAGCACAGGGGTTTCCCCATACTACCTCCCCTCC...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCTGGCCACCTTGGGGCTaGCCTAGTCAGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELWPPWG*PSQAPA
Trigger: TGCTGGGGCCTGACTAGGCCAGCCCCAAGGTGGCCA...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCATGAAGCCAGAACTCTaGCCACCTTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPMKPEL*PPWGWP
Trigger: AGGCCAGCCCCAAGGTGGCCAGAGTTCTGGCTTCAT...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCTCAGTAAAGCATGCTTaGGTAGGACCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQASVKHA*VGPAAG
Trigger: GCCTGCTGCAGGTCCTACCCAAGCATGCTTTACTGA...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGGCTTCAGTCTGGGACTaGGAGACTGGCAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWASVWD*ETGRAP
Trigger: TGGTGCTCTGCCAGTCTCCCAGTCCCAGACTGAAGC...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATTGGCTGAGCTGGTGGTaGCAGCTGTGGAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDWLSWW*QLWSGQ
Trigger: TTGCCCGCTCCACAGCTGTCACCACCAGCTCAGCCA...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCTAAGTGGCCACATATaGATCCCGCAGTTCACTGGA +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQALSGHI*IPQFTG
Trigger: TCCAGTGAACTGCGGGATTCATATGTGGCCACTTAG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACCTTCCCGGTGGAGTTTaGGCACTGCCCAAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDLPGGV*ALPKAS
Trigger: GGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAG...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCAGAAGCCTTTTGATTTaGCTAAGCTGGGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQARSLLI*LSWAKA
Trigger: GGCCTTGGCCCAGCTTAGTCAAATCAAAAGGCTTCT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTACCTCAATCAATCAATaGTCTGGTTGGGATGAAAAC +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALTSINQ*SGWDEN
Trigger: GTTTTCATCCCAACCAGATCATTGATTGATTGAGGT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTGCTCCGCAGCGATCTaGTCCAAGCGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLECSAAI*SKRLSR
Trigger: CCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTGGTGGCCGGCTGCTaGCACCGCCACCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RMPGSESFALLCLLYFCGLVAGC*HRHRHH
Trigger: GTGGTGGCGGTGGCGGTGGCAGCAGCCGGCCACCAG...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACTGTCAGGCTGCTTACTaGAAGGCCCCATCATCCGCG +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHCQAAY*KAPSSA
Trigger: CGCGGATGATGGGGCCTTGCAGTAAGCAGCCTGACA...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGCGATGCCCTTCACCTaGTGGTGGCCATTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSAMPFT*WWPLLL
Trigger: CAGGAGCAATGGCCACCAGCAGGTGAAGGGCATCGC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCCTTGCTACCAAACCTaGCCGGAGTGTGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAPCYQT*PECEEL
Trigger: AAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACAGCAGGAGGAGTACGTaGCAGGCCTGGAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHSRRST*QAWNKA
Trigger: GGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAGAACACAGCCCAAACTaGCAAGCCACTCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPEHSPN*QATHSG
Trigger: TCCTGAGTGAGTGGCTTGGCAGTTTGGGCTGTGTTC...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCGACCGCCCTGGGCACTaGCACGGGCGACAGACGGCC +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVDRPGH*HGRQTA
Trigger: GGCCGTCTGTCGCCCGTGCCAGTGCCCAGGGCGGTC...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCATCTTGCCATCTGGATTaGCCTTTTGCTCCGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPSCHLD*PFAPQR
Trigger: TCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGA...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGAAGTTGTGTTCTCTTaGGGGGCTGGTGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAEVVFS*GAGGRL
Trigger: CAGCCGGCCACCAGCCCCCCAAGAGAACACAACTTC...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCTGGCTGGGATGCGTTaGGGGAGGAGGCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLLAGMR*GRRRLL
Trigger: CAGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAAGCCTGGGAGTGTCCTaGGGAGGGGAGGTAGTATGG +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSSLGVS*GGEVVW
Trigger: CCATACTACCTCCCCTCCCCAGGACACTCCCAGGCT...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGGACCAGCTTTTTGGTTaGCAGAGGGGCCGGGATATC +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWDQLFG*QRGRDI
Trigger: GATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTC...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACGAGACTTCTCAGAGGTaGCGACACCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHETSQR*RHHSSS
Trigger: GCTGCTGCTGTGGTGTCGCCACCTCTGAGAAGTCTC...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGAACTCTGGCCACCTTaGGGCTGGCCTAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDELWPP*GWPSQA
Trigger: GGCCTGACTAGGCCAGCCCCAAGGTGGCCAGAGTTC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATTCCCACCCAAGGGCCTaGCTGTGTGCTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDSHPRA*LCAFPG
Trigger: CCCTGGGAAAGCACACAGCCAGGCCCTTGGGTGGGA...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCTGCTCTACCACTTCTTaGAACCTGCCCGAAAACCAG +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQACSTTS*NLPENQ
Trigger: CTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCA...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCCTCTCTGTGTGGCCTaGGCTGCTTCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHPLCVA*AASQHG
Trigger: ACCATGCTGTGAAGCAGCCCAGGCCACACAGAGAGG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCACACTGCTCTTTAACTTaGTCTTGGCTGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPHCSLT*SWLSWW
Trigger: CCACCAGCTCAGCCAAGATCAAGTTAAAGAGCAGTG...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATAGGAGGGCTGCTCAGTaGGAGAGACTTCCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDRRAAQ*ERLPGG
Trigger: TCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTCCT...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGATGCCTGCTACCCTTaGAGGTATCTTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLDACYP*RYLPCF
Trigger: AAAGCAGGGAAGATACCTTCAAGGGTAGCAGGCATC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGCGGGCGAGGCCATCTaGGACCAGCCAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSAGEAI*DQPVPS
Trigger: GCTGGGGACTGGCTGGTCTCAGATGGCCTCGCCCGC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCTCGATGGCAGCTTTTaGACCCAAGTCCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPLDGSF*TQVPMS
Trigger: AGACATGGGGACTTGGGTTCAAAAGCTGCCATCGAG...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACTCTGGATTGGCCTTTTaGTCCGCAGCGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHSGLAF*SAAICS
Trigger: GGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGA...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGTCGTCTCGGGTCCGTaGTTCCCCCTGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSVVSGP*FPLGQA
Trigger: GGCCTGCCCCAGGGGGAAGCACGGACCCGAGACGAC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCATGTCAGGCTGCTTACTaGAAGGCCCCATCATCCGCG +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSCQAAY*KAPSSA
Trigger: CGCGGATGATGGGGCCTTGCAGTAAGCAGCCTGACA...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGCCAGTAACTCCACCTaGAGAGGACATGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAASNST*RGHGTG
Trigger: GCCAGTGCCATGTCCTCTGCAGGTGGAGTTACTGGC...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCATGGGGAAACCCCTGTaGTCTACCCTCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELMGKPL*STLWPG
Trigger: CCCAGGCCAGAGGGTAGAGCACAGGGGTTTCCCCAT...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGCTTCAGCCAGCAAGATaGTCATGGGCCAGCATATCC +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQLQPAR*SWASIS
Trigger: GGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAG...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGACGTTTCAGAAAGACTaGGTGGCTGCTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWTFQKD*VAAGRW
Trigger: CCATCTCCCAGCAGCCACGCAGTCTTTCTGAAACGT...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCTACTCTCTCCCTGCTaGCCAGGGTCCATGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDLLSPC*PGSMAS
Trigger: GCTTGCCATGGACCCTGGGCAGCAGGGAGAGAGTAG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCCGGAATGGATGTTTTTaGTGCCCCGACTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLRNGCF*CPDSEE
Trigger: TTCCTCTGAGTCGGGGCAGCAAAAACATCCATTCCG...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACAACGTGTGGCCCAGTTaGCCAGCCAACCACCTGACA +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDNVWPS*PANHLT
Trigger: TGTCAGGTGGTTGGCTGGGCAACTGGGCCACACGTT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCGAGCACGAGGAGTCTaGAGCCCCGCCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSERARGV*SPAQKQ
Trigger: CTGTTTCTGGGCGGGGCTGCAGACTCCTCGTGCTCG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375114.7
CDS-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGTCTTGCCATCTGGATTaGCCTTTTGCTCCGCAGCGA +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWSCHLD*PFAPQR
Trigger: TCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGA...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGGCCCGGCTTGAGGCCTaGGGCAGCGATGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLARLEA*GSDALH
Trigger: GTGAAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGC...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGGTGGCATCCAGGGTTaGGTGCCCGGCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLGGIQG*VPGLRP
Trigger: AGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGGTCTTGACCTACTATaGGGTAAACCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAGLDLL*GKPSGS
Trigger: TGACCCACTTGGTTTACCCCATAGTAGGTCAAGACC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGCGAGACCAGCCTAAGTaGCCACATATGAATCCCGCA +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQRDQPK*PHMNPA
Trigger: TGCGGGATTCATATGTGGCCACTTAGGCTGGTCTCG...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGCGAGACCAGCCTAAGTaGCCACATATGAATCCCGCA +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWRDQPK*PHMNPA
Trigger: TGCGGGATTCATATGTGGCCACTTAGGCTGGTCTCG...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTTCTGGAGTTCCAGGATaGGACTCTCGTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPSGVPG*DSRSPC
Trigger: ACAGGGAGAACGAGAGTCCCATCCTGGAACTCCAGA...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCATCCAGGGGCTTTTCTaGAGTTCCAGGATGGGACTC +
Preference number: 4 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPIQGLF*SSRMGL
Trigger: GAGTCCCATCCTGGAACTCCAGAAAAGCCCCTGGAT...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTATCACCATCTCCTTCTaGAGTTTTCAGATGTTAGAA +
Preference number: 4 (lower is better)
Translates to: GWHPGLGARLEAWGSDALITISF*SFQMLE
Trigger: TTCTAACATCTGAAAACTCCAGAAGGAGATGGTGAT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGGCTGCTTCACAGCATaGTGGTTGGGTCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAGCFTA*WLGPKS
Trigger: GCTCTTGGGACCCAACCACCATGCTGTGAAGCAGCC...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGGCTGCTTCACAGCATaGTGGTTGGGTCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSGCFTA*WLGPKS
Trigger: GCTCTTGGGACCCAACCACCATGCTGTGAAGCAGCC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGGGCTTCCCAGGCGCATaGGCTCTCCCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLGFPGA*ALPTLS
Trigger: TGAGAGGGTGGGGAGAGCCCATGCGCCTGGGAAGCC...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375114.7
3UTR CAA 72 bp GAGGGCTGCTCAGTGAGAGAGACTTCCCGGTGGAGTTaGAGCACTGCCCAAAGCCTCCACCCTCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: EGCSVRETSRWS*STAQSLHPLPK
Trigger: TTTTGGTAGAGGGTGGAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCTCACTGAGCAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGCCGGGATATCTTCATaGGAAAACACAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLAGISS*ENTNHP
Trigger: GGGATGGTTTGTGTTTTCTCATGAAGATATCCCGGC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGCAGGAAAGGGGTGGTaGCAAGAAACAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAAGKGW*QETGEA
Trigger: AGCCTCTCCTGTTTCTTGTCACCACCCCTTTCCTGC...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTTCCACCATGGGCTCTTaGCAAATCTCTACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPSTMGS*QISTLS
Trigger: GGAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGGA...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGAGAAGCCTTTTGATTTaGCTAAGCTGGGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQRSLLI*LSWAKA
Trigger: GGCCTTGGCCCAGCTTAGTCAAATCAAAAGGCTTCT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGGAAGGAGGCGGTACTaGCGCACTCGGGGACGTAAG +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLGRRRY*RTRGRK
Trigger: CTTACGTCCCCGAGTGCGGCAGTACCGCCTCCTTCC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCCCCTGGGGCAGGCCTaGCTCAGAAGTTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEPLGQA*LRSCVL
Trigger: GAGAACACAACTTCTGAGGCAGGCCTGCCCCAGGGG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCTTCAGCCAGCAAGATaGTCATGGGCCAGCATATCC +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHLQPAR*SWASIS
Trigger: GGATATGCTGGCCCATGAGCATCTTGCTGGCTGAAG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGCAAGTGGGTCACAACTaGTTGACACTTCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWQVGHN*LTLQPA
Trigger: TGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTG...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACCCTATTTCTGGGTGCTaGCCTCCCACAGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDPISGC*PPTAPY
Trigger: GTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGG...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGACAGGCAGGAGGGCTaGTCAGTGAGAGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDDRQEG*SVRETS
Trigger: GGAAGTCTCTCTCACTGAGCAGCCCTCCTGCCTGTC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAACTGGGGCCTCAGAGTaGTCGCCTGCCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLTGASE*SPAQDD
Trigger: GTCATCCTGGGCAGGCGAGCACTCTGAGGCCCCAGT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTTTCCTCAGTAAAGCATaGTTGGGTAGGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPFLSKA*LGRTCS
Trigger: GCTGCAGGTCCTACCCAAGCATGCTTTACTGAGGAA...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACCAGCATATGACCCGGTaGCAGCATGACCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDQHMTR*QHDQAK
Trigger: CTTTGCCTGGTCATGCTGGCACCGGGTCATATGCTG...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTCAGCATATGACCCGGTaGCAGCATGACCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAQHMTR*QHDQAK
Trigger: CTTTGCCTGGTCATGCTGGCACCGGGTCATATGCTG...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGGAAGGGCATGTGTATaGACTGTTAGAAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLGRACV*TVRSQP
Trigger: AGGTTGGCTTCTAACAGTGCATACACATGCCCTTCC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCCTGTGTGGCCTGGGCTaGTTCACAGCATGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELLCGLG*FTAWWL
Trigger: CAACCACCATGCTGTGAAGCAGCCCAGGCCACACAG...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGTCCGCGTCTGTGTCCTaGCTGTGTTCCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQSASVS*LCSSSS
Trigger: GGAAGAGCTGGAACACAGCCAGGACACAGACGCGGA...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAACTGGCTGGGATGCGTTaGGGGAGGAGGCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKLAGMR*GRRRLL
Trigger: CAGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAG...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGTGGCTGCTGGGAGATaGTACAGGGCAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDVAAGR*YRAEAE
Trigger: TTCTGCCTCTGCCCTGTACCATCTCCCAGCAGCCAC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCGTGGCTGCTGGGAGATaGTACAGGGCAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELVAAGR*YRAEAE
Trigger: TTCTGCCTCTGCCCTGTACCATCTCCCAGCAGCCAC...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCGAGACTTCTCAGAGGTaGCGACACCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELETSQR*RHHSSS
Trigger: GCTGCTGCTGTGGTGTCGCCACCTCTGAGAAGTCTC...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTCTGGCTCTCGCCTTCTaGGCAAGGAAAGATGTGGGT +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIALALAF*ARKDVG
Trigger: ACCCACATCTTTCCTTGCCCAGAAGGCGAGAGCCAG...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTTTCTCACAGGCCCTATaGCCATGCTCTACCACTTCT +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPFSQAL*PCSTTS
Trigger: AGAAGTGGTAGAGCATGGCCATAGGGCCTGTGAGAA...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCGTGGCCTCTCTGTGTaGCCTGGGCTGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLRGLSV*PGLLHS
Trigger: GCTGTGAAGCAGCCCAGGCCACACAGAGAGGCCACG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGGATGGTCTCCACATCTaGTTTCTTCACCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQDGLHI*FLHQSC
Trigger: ACAGCTCTGGTGAAGAAATCAGATGTGGAGACCATC...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTCTTTTGGCTCAGGTATaGAGCCAGAACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDALLAQV*SQNSGH
Trigger: GTGGCCAGAGTTCTGGCTTCATACCTGAGCCAAAAG...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCCTTTCAAGATGGCTGTaGGGATCACAAATGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLLSRWL*GSQMRL
Trigger: AAGCCTCATTTGTGATCCTCACAGCCATCTTGAAAG...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTACAGCCAGTCCCCAGCTaGTCTGCCAGCTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLQPVPS*SASSLQ
Trigger: CTGAAGTGAGCTGGCAGATCAGCTGGGGACTGGCTG...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCTATGGGGCAGGTTATaGCCTTACGGGTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQLWGRL*PYGSTW
Trigger: CCAGGTTGACCCGTAAGGTCATAACCTGCCCCATAG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGCTATGGGGCAGGTTATaGCCTTACGGGTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLELWGRL*PYGSTW
Trigger: CCAGGTTGACCCGTAAGGTCATAACCTGCCCCATAG...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACATGATCTGGTTGGGATaGAAACCAAGGATGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHMIWLG*KPRMPG
Trigger: GCCAGGCATCCTTGGTTTTCATCCCAACCAGATCAT...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCATGGTGCTGGGCTTTaGATGGCATCAGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQHGAGL*MASVRQ
Trigger: CTGCCTCACTGATGCCATTCAAAGCCCAGCACCATG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATTGCTCCGCAGCGATCTaGTCCAAGCGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYCSAAI*SKRLSR
Trigger: CCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCA...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCCCCTGGGGCAGGCCTaGCTCAGAAGTTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLPLGQA*LRSCVL
Trigger: GAGAACACAACTTCTGAGGCAGGCCTGCCCCAGGGG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGGGCCTGGGGCAGCGATaGCCTTCACCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRGLGQR*PSPAGG
Trigger: GCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCC...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCAAGTGGGTCACAACTaGTTGACACTTCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHQVGHN*LTLQPA
Trigger: TGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTACGTTTCAGAAAGACTaGGTGGCTGCTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIATFQKD*VAAGRW
Trigger: CCATCTCCCAGCAGCCACGCAGTCTTTCTGAAACGT...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTACGCTCTATTCCTTaGTACCAAACCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAVRSIP*YQTCPE
Trigger: CTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTAC...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCCTATTTCTGGGTGCTaGCCTCCCACAGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQPISGC*PPTAPY
Trigger: GTATGGAGCTGTGGGAGGGCAGCACCCAGAAATAGG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGTGCCTAGTGCTATTGTaGCCTCAGTGTGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWCLVLL*PQCEVH
Trigger: ATGAACCTCACACTGAGGGCACAATAGCACTAGGCA...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGAGGCTCTGGGGGCAGTaGCTAGTGCTATTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSERLWGQ*LVLLCP
Trigger: AGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACGGGCTTGTCTTCTCTTaGGGTTTTTGGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHGLVFS*GFWNSA
Trigger: GGCTGAGTTCCAAAAACCGCAAGAGAAGACAAGCCC...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCACCAGCAAGATGCTCATaGGCCAGCATATCCAACCCT +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSPARCS*ASISNP
Trigger: AGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGG...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATGAACTCTGGCCACCTTaGGGCTGGCCTAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYELWPP*GWPSQA
Trigger: GGCCTGACTAGGCCAGCCCCAAGGTGGCCAGAGTTC...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTGGCAATGGCCAAGCATaGATTGGGGCTTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAGNGQA*IGAFGS
Trigger: TGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACTGGGTCTGTTATAGCTaGCTCTCGCCTTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDWVCYS*LSPSGQ
Trigger: TTGCCCAGAAGGCGAGAGCCAGCTATAACAGACCCA...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGACGGTTCTCCAAGCCTaGCATACTAAGGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQTVLQA*HTKEAY
Trigger: ATAGGCTTCCTTAGTATGCCAGGCTTGGAGAACCGT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCATCTGGAGTTCCAGGATaGGACTCTCGTTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSSGVPG*DSRSPC
Trigger: ACAGGGAGAACGAGAGTCCCATCCTGGAACTCCAGA...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTATCCAGGGGCTTTTCTaGAGTTCCAGGATGGGACTC +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAIQGLF*SSRMGL
Trigger: GAGTCCCATCCTGGAACTCCAGAAAAGCCCCTGGAT...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGAAGAATCTGGCTACTaGTGGAGGGATTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAEESGY*WRDFDL
Trigger: CAAATCAAAATCCCTCCACCAGTAGCCAGATTCTTC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCCTCTCTGTGTGGCCTaGGCTGCTTCACAGCATGGT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEPLCVA*AASQHG
Trigger: ACCATGCTGTGAAGCAGCCCAGGCCACACAGAGAGG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp CAGCTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTaGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: QLRKLRPGKEKD*PRVINLAGSNR
Trigger: CCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGCAGGAAAGGGGTGGTaGCAAGAAACAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEAGKGW*QETGEA
Trigger: AGCCTCTCCTGTTTCTTGTCACCACCCCTTTCCTGC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGCTTTTGGCTCAGGTATaGAGCCAGAACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLELLAQV*SQNSGH
Trigger: GTGGCCAGAGTTCTGGCTTCATACCTGAGCCAAAAG...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTTCCACCATGGGCTCTTaGCAAATCTCTACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIASTMGS*QISTLS
Trigger: GGAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGGA...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCCTTATGGGCCAAGGTaGGTAGAGCTGATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEPYGPR*VELMPA
Trigger: AGCAGGCATCAGCTCTACTCACCTTGGCCCATAAGG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCTGTGAGGATCACAAATaGGGCTTTCAATCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQACEDHK*GFQSEN
Trigger: GTTTTCAGATTGAAAGCCTCATTTGTGATCCTCACA...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTCAGCCAGTCCCCAGCTaGTCTGCCAGCTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPQPVPS*SASSLQ
Trigger: CTGAAGTGAGCTGGCAGATCAGCTGGGGACTGGCTG...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGGGGCTGGAGTCATCTTaGAGCCTTCCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQGLESS*SLPLSC
Trigger: ACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCC...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCATCCGTCTTGATGGCCTaGAGCTCACTGCTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSSVLMA*SSLLFN
Trigger: GTTAAAGAGCAGTGAGCTGCAGGCCATCAAGACGGA...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGGTACGCTCTATTCCTTaGTACCAAACCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQVRSIP*YQTCPE
Trigger: CTCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTAC...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGCAGGGGCAGACAGGCTaGGTGTCTCCGGATGCAAAC +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLQGQTG*VSPDAN
Trigger: GTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTG...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAAGCAGGAGGAGTACGTaGCAGGCCTGGAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLSRRST*QAWNKA
Trigger: GGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCCATTCTTTGGACTTTaGCCAAGTTCCAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHPFFGL*PSSNPG
Trigger: GCCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTTGCTTGGGTAGGACCTaGAGCAGGCATATAGCACTA +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDACLGRT*SRHIAL
Trigger: TAGTGCTATATGCCTGCTGCAGGTCCTACCCAAGCA...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTAATGGATGTTTTTGCTaGCCCGACTCAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDANGCFC*PDSEEG
Trigger: CCCTTCCTCTGAGTCGGGGCAGCAAAAACATCCATT...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAAATGGATGTTTTTGCTaGCCCGACTCAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSNGCFC*PDSEEG
Trigger: CCCTTCCTCTGAGTCGGGGCAGCAAAAACATCCATT...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAAACGTGTGGCCCAGTTaGCCAGCCAACCACCTGACA +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLNVWPS*PANHLT
Trigger: TGTCAGGTGGTTGGCTGGGCAACTGGGCCACACGTT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGTCACCCAGGCTGGAGTaGAGCGGCAGGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLSPRLE*SGRIMA
Trigger: AGCCATGATCCTGCCGCTGCACTCCAGCCTGGGTGA...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCCAGGCCCTATGGCCATaGTCTACCACTTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELQALWP*STTSWN
Trigger: GTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTG...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACGAAGCTTCAAGGACATaGTGCCCACCAGTAACAATG +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHEASRT*CPPVTM
Trigger: CATTGTTACTGGTGGGCACCATGTCCTTGAAGCTTC...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATCCCTTCACCTGCTGGTaGCCATTGCTCCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYPFTCW*PLLLSG
Trigger: GCCTGACAGGAGCAATGGCCACCAGCAGGTGAAGGG...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGGAGGGGAGGTAGTATaGGGAAACCCCTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEGGEVV*GNPCAL
Trigger: TAGAGCACAGGGGTTTCCCCATACTACCTCCCCTCC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTAATCCCGCAGTTCACTaGACCAGGGTAGGTACTTGT +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIANPAVH*TRVGTC
Trigger: ACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATT...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGCCCTCTACCAAAACATaGAGCCAAAGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEPSTKT*SQSPGG
Trigger: TCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGG...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGATGAAGCCAGAACTCTaGCCACCTTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLMKPEL*PPWGWP
Trigger: AGGCCAGCCCCAAGGTGGCCAGAGTTCTGGCTTCAT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCAAAGATGTGGGTACATaGATGGGTGAAGTATGTTCC +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLKDVGT*MGEVCS
Trigger: GGAACATACTTCACCCATCCATGTACCCACATCTTT...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCTCAGTAAAGCATGCTTaGGTAGGACCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELSVKHA*VGPAAG
Trigger: GCCTGCTGCAGGTCCTACCCAAGCATGCTTTACTGA...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCTCCCACCCAAGGGCCTaGCTGTGTGCTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSSHPRA*LCAFPG
Trigger: CCCTGGGAAAGCACACAGCCAGGCCCTTGGGTGGGA...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCAAAACCAAGGATGCCTaGCTCAGAATCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FQGACFSPHACISWPQGLKTKDA*LRIFCS
Trigger: AGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTT...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGGATGCCACCTTTACTTaGGGCCATGCTTTTAAACCT +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWDATFT*GHAFKP
Trigger: AGGTTTAAAAGCATGGCCCCAAGTAAAGGTGGCATC...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCTTCTCAGACGGTGGCTaGGCTGGAGTCATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELFSDGG*AGVILK
Trigger: CTTCAAGATGACTCCAGCCCAGCCACCGTCTGAGAA...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTTATCTCTCATGGTGCTaGGCTTTGAATGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPYLSWC*ALNGIS
Trigger: ACTGATGCCATTCAAAGCCCAGCACCATGAGAGATA...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp ACCTACTATGGGGTAAACCAAGTGGGTCACAACTGCTaGACACTTCAGCCAGCAAGATGCTCATGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TYYGVNQVGHNC*TLQPARCSWAS
Trigger: GCTGGCCCATGAGCATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCACTTGGTTTACCCCATAGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGTTACATTGCTTGCCTaGAGCTTCAAGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDVTLLA*SFKDMV
Trigger: CACCATGTCCTTGAAGCTTCAGGCAAGCAATGTAAC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTGGCTGAGCTGGTGGTaGCAGCTGTGGAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRWLSWW*QLWSGQ
Trigger: TTGCCCGCTCCACAGCTGTCACCACCAGCTCAGCCA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTGGGTCACAACTGCTTaGCACTTCAGCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEWVTTA*HFSQQD
Trigger: ATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTGCAGCAGCTTCGTCCTaGGCGGCTATTTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPAAASS*AAISQV
Trigger: TACCTGGGAAATAGCCGCTCAGGACGAAGCTGCTGC...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCTGACCCTCAAGCTCTaGAACGTTGAGTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDLTLKL*NVEFLS
Trigger: ACTGAGGAACTCAACGTTTCAGAGCTTGAGGGTCAG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTCCTTACTACACCTACTaGGGGTGGTTGTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAPYYTY*GWLWRL
Trigger: TAATCTCCACAACCACCCTCAGTAGGTGTAGTAAGG...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCTCGATGGCAGCTTTTaGACCCAAGTCCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSELDGSF*TQVPMS
Trigger: AGACATGGGGACTTGGGTTCAAAAGCTGCCATCGAG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTACATGGTGCTGGGCTTTaGATGGCATCAGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLHGAGL*MASVRQ
Trigger: CTGCCTCACTGATGCCATTCAAAGCCCAGCACCATG...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGGTTGGTTACATTGCTTaGCTGAAGCTTCAAGGACAT +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQVGYIA*LKLQGH
Trigger: ATGTCCTTGAAGCTTCAGGCAAGCAATGTAACCAAC...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCCTTGCTACCAAACCTaGCCGGAGTGTGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQPCYQT*PECEEL
Trigger: AAGTTCTTCACACTCCGGGCAGGTTTGGTAGCAAGG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGTTCCTCAGTAAAGCATaGTTGGGTAGGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQFLSKA*LGRTCS
Trigger: GCTGCAGGTCCTACCCAAGCATGCTTTACTGAGGAA...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTGGAAGGGCATGTGTATaGACTGTTAGAAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAGRACV*TVRSQP
Trigger: AGGTTGGCTTCTAACAGTGCATACACATGCCCTTCC...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGTGGCTCAGAATCTTTTaGTCTGCTTTGCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWWLRIF*SALPSL
Trigger: TAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCA...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGGATGAAAACCAAGGATaGCTGGCTCAGAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQDENQG*LAQNLL
Trigger: CAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATC...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGGAGGGATTTTGATTTaGCTAAAACCTCAATCAATC +
Preference number: 4 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAGGILI*LKPQSI
Trigger: GATTGATTGAGGTTTTAGGCAAATCAAAATCCCTCC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACTTGTTAGCCAAGCCTTaGTCTCCTTTTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHLLAKP*SPFGDS
Trigger: AGAATCCCCAAAAGGAGAGCAAGGCTTGGCTAACAA...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCTTCTTCTTGCCATCTaGATTGGCCTTTTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDLLLAI*IGLLLR
Trigger: GCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGGCCCGGCTTGAGGCCTaGGGCAGCGATGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILARLEA*GSDALH
Trigger: GTGAAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGC...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCGCAGAGGCAGAAGACTaGGAGGCTGGTGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSAEAED*EAGGRT
Trigger: TGTCCTCCCACCAGCCTCCCAGTCTTCTGCCTCTGC...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATAGCAGTCGGAGGGTCTaGGAGACTTCTCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYSSRRV*ETSQRW
Trigger: CCACCTCTGAGAAGTCTCCCAGACCCTCCGACTGCT...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACGGCTGTAGACCGGGTTaGTTTGAAATGGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDGCRPG*FEMGSF
Trigger: AAAACTCCCCATTTCAAACCAACCCGGTCTACAGCC...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCAGCACAGAGCTACACTaGGGCCTCAGAGTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSSTELH*GLRVLA
Trigger: GGCGAGCACTCTGAGGCCCCAGTGTAGCTCTGTGCT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCCCTCAGCCTCCACCATaGGCTCTTGACAAATCTCTA +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELPQPPP*ALDKSL
Trigger: TAGAGATTTGTCAAGAGCCCATGGTGGAGGCTGAGG...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCCATGCCTGCATCTCATaGCCTCAGGGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVHACIS*PQGLSL
Trigger: GAGGCTGAGGCCCTGAGGCCATGAGATGCAGGCATG...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTGCCAGGGTATTGAAATaGGTCTGTTATAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAARVLK*VCYSWL
Trigger: GAGCCAGCTATAACAGACCCATTTCAATACCCTGGC...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTACGGTTCTCCAAGCCTaGCATACTAAGGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIATVLQA*HTKEAY
Trigger: ATAGGCTTCCTTAGTATGCCAGGCTTGGAGAACCGT...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCCAGGCAAAGCCTTATaGGCCAAGGTGAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEPGKAL*AKVSRA
Trigger: AGCTCTACTCACCTTGGCCCATAAGGCTTTGCCTGG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAACCAGGGTCATCAACCTaGCTGGCAGCAACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKPGSST*LAATGG
Trigger: TCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGG...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCTTCTCACAGGCCCTATaGCCATGCTCTACCACTTCT +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELFSQAL*PCSTTS
Trigger: AGAAGTGGTAGAGCATGGCCATAGGGCCTGTGAGAA...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTATTAGCAGTACACAATaGGCATGTATAAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPISSTQ*ACISST
Trigger: TGTGCTGCTTATACATGCTCATTGTGTACTGCTAAT...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTATTGTGCCCTCAGTGTaGGGTTCATTCAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAIVPSV*GSFSSK
Trigger: TTTAGAGCTGAATGAACCTCACACTGAGGGCACAAT...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCTGACCCTCAAGCTCTaGAACGTTGAGTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSELTLKL*NVEFLS
Trigger: ACTGAGGAACTCAACGTTTCAGAGCTTGAGGGTCAG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGGACCCGGTGCCAGCATaGCCAGGCAAAGCCTTATGG +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRDPVPA*PGKALW
Trigger: CCATAAGGCTTTGCCTGGTCATGCTGGCACCGGGTC...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGATGATCTGGTTGGGATaGAAACCAAGGATGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEMIWLG*KPRMPG
Trigger: GCCAGGCATCCTTGGTTTTCATCCCAACCAGATCAT...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATTGCCTAGTGCTATTGTaGCCTCAGTGTGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDCLVLL*PQCEVH
Trigger: ATGAACCTCACACTGAGGGCACAATAGCACTAGGCA...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGAACACAGCCCAAACTaGCAAGCCACTCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLEHSPN*QATHSG
Trigger: TCCTGAGTGAGTGGCTTGGCAGTTTGGGCTGTGTTC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCAGGCCCTATGGCCATaGTCTACCACTTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLQALWP*STTSWN
Trigger: GTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTGTGTGGCCTGGGCTaGTTCACAGCATGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RMPGSESFALLCLLYFCGLCGLG*FTAWWL
Trigger: CAACCACCATGCTGTGAAGCAGCCCAGGCCACACAG...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGATGCCCTTCACCTGCTaGTGGCCATTGCTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLMPFTC*WPLLLS
Trigger: TGACAGGAGCAATGGCCACCAGCAGGTGAAGGGCAT...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATATGCCCTTCACCTGCTaGTGGCCATTGCTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYMPFTC*WPLLLS
Trigger: TGACAGGAGCAATGGCCACCAGCAGGTGAAGGGCAT...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCCACCTGCAGAGGACATaGCACTGGCTGGGATGCGTT +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVHLQRT*HWLGCV
Trigger: AACGCATCCCAGCCAGTGCCATGTCCTCTGCAGGTG...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAACACCTGCAGAGGACATaGCACTGGCTGGGATGCGTT +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKHLQRT*HWLGCV
Trigger: AACGCATCCCAGCCAGTGCCATGTCCTCTGCAGGTG...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCCCTAGACCAGCTTTTTaGTTGGCAGAGGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSPRPAF*LAEGPG
Trigger: TCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCTAGG...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTAGACTGGGAGGCTGGTaGGAGGACAACGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPRLGGW*EDNVQM
Trigger: CATTTGGACGTTGTCCTCCCACCAGCCTCCCAGTCT...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTTGGATCCATTCATTGTaGGGAATGAAGGGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAWIHSL*GMKGEV
Trigger: TACTTCCCCCTTCATTCCCCACAATGAATGGATCCA...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGAGAGAGACTTCCCGGTaGAGTTTGAGCACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLRETSR*SLSTAQ
Trigger: TTGGGCAGTGCTCAAACTCCACCGGGAAGTCTCTCT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGAGCACAGAGCTACACTaGGGCCTCAGAGTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRSTELH*GLRVLA
Trigger: GGCGAGCACTCTGAGGCCCCAGTGTAGCTCTGTGCT...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGGCCCCAGCAGAGCTTaGGAATATCAAAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLGPSRA*EYQSTE
Trigger: CTCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGGCTGCCCAGGGTCCATaGCAAGCAAATATATGGGGA +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLAAQGP*QANIWG
Trigger: TCCCCATATATTTGCTTGCCATGGACCCTGGGCAGC...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGCTGGCTCTCGCCTTCTaGGCAAGGAAAGATGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLLALAF*ARKDVG
Trigger: ACCCACATCTTTCCTTGCCCAGAAGGCGAGAGCCAG...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTATGTCTGAAGATCCCTaGACTTTACAATTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPMSEDP*TLQFVS
Trigger: GCTCACAAATTGTAAAGTCCAGGGATCTTCAGACAT...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCGCTTCAGTCTGGGACTaGGAGACTGGCAGAGCACCA +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVASVWD*ETGRAP
Trigger: TGGTGCTCTGCCAGTCTCCCAGTCCCAGACTGAAGC...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGAGACGGTGGCTGGGCTaGAGTCATCTTGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLRRWLG*SHLEAF
Trigger: GAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCT...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTAGACGGTGGCTGGGCTaGAGTCATCTTGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPRRWLG*SHLEAF
Trigger: GAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCT...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCTTTTATTATCTCTCATaGTGCTGGGCTTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPFYYLS*CWALNG
Trigger: GCCATTCAAAGCCCAGCACCATGAGAGATAATAAAA...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGTCCTTCTCTGTCTCCTaGGAAGGACACGGTGACACG +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLSFSVS*EGHGDT
Trigger: CGTGTCACCGTGTCCTTCCCAGGAGACAGAGAAGGA...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCACGAAGAGCCTGTATATaGCAGATGCTGCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSRRACI*QMLLSL
Trigger: TAAAGAGAGCAGCATCTGCCATATACAGGCTCTTCG...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375114.7
3UTR CAA 72 bp TGGGCTTTGAATGGCATCAGTGAGGCAGTTCTTACTTaGTTCTCAGACGGTGGCTGGGCTGGAGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: WALNGISEAVLT*FSDGGWAGVIL
Trigger: CAAGATGACTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCATTCAAAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGTGGGTCACAACTGCTTaGCACTTCAGCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLWVTTA*HFSQQD
Trigger: ATCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCA...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCATGCAAACTTCCTACTaGTTGCTGTCACTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELMQTSY*LLSLEY
Trigger: GTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCAT...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAACCTTATGGGCCAAGGTaGGTAGAGCTGATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKPYGPR*VELMPA
Trigger: AGCAGGCATCAGCTCTACTCACCTTGGCCCATAAGG...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGGATACTGCTGTCAGCTaGACATGTACACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLDTAVS*TCTRGL
Trigger: GAGGCCACGTGTACATGTTCAGCTGACAGCAGTATC...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTGATACTGCTGTCAGCTaGACATGTACACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPDTAVS*TCTRGL
Trigger: GAGGCCACGTGTACATGTTCAGCTGACAGCAGTATC...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGGGGCTGGAGTCATCTTaGAGCCTTCCTCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLGLESS*SLPLSC
Trigger: ACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCC...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGTTGGTTACATTGCTTaGCTGAAGCTTCAAGGACAT +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSVGYIA*LKLQGH
Trigger: ATGTCCTTGAAGCTTCAGGCAAGCAATGTAACCAAC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAATCTGGATTGGCCTTTTaGTCCGCAGCGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKSGLAF*SAAICS
Trigger: GGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGA...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGGCCAGTAACTCCACCTaGAGAGGACATGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRASNST*RGHGTG
Trigger: GCCAGTGCCATGTCCTCTGCAGGTGGAGTTACTGGC...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCAAGCCTATTTCTGGGTaGTGCCCTCCCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSKPISG*CPPTAP
Trigger: TGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACCAGTCTGAAAATTGCTaGAGATCCTCAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDQSENC*RSSKGT
Trigger: AGTGCCTTTTGAGGATCTGCAGCAATTTTCAGACTG...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTAATCCTTTTAAGAGCTaGGAAAGACCAGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPNPFKS*ERPDLE
Trigger: TTCTAAGTCTGGTCTTTCCCAGCTCTTAAAAGGATT...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGAGAAACAGGAGAGGCTaGAGTAAGCAGGATCTTACA +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLERNRRG*SKQDLT
Trigger: TGTAAGATCCTGCTTACTCCAGCCTCTCCTGTTTCT...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCAAATGTCTAGACGGGTaGCCCAAGACAGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSKCLDG*PKTGAD
Trigger: GTCTGCCCCTGTCTTGGGCCACCCGTCTAGACATTT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGAGCAGTCGGAGGGTCTaGGAGACTTCTCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRSSRRV*ETSQRW
Trigger: CCACCTCTGAGAAGTCTCCCAGACCCTCCGACTGCT...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACCGGGTTGGTTTGAAATaGGGAGTTTTCAATAAGGAT +
Preference number: 4 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHRVGLK*GVFNKD
Trigger: ATCCTTATTGAAAACTCCCCATTTCAAACCAACCCG...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCCTTCTCTATTTCTGTaGTCTTGTCAGACAGGCCTA +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDPSLFL*SCQTGL
Trigger: TAGGCCTGTCTGACAAGACCACAGAAATAGAGAAGG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGAAGAATCTGGCTACTaGTGGAGGGATTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAEESGY*WRDFDL
Trigger: CAAATCAAAATCCCTCCACCAGTAGCCAGATTCTTC...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGGATGCCACCTTTACTTaGGGCCATGCTTTTAAACCT +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEDATFT*GHAFKP
Trigger: AGGTTTAAAAGCATGGCCCCAAGTAAAGGTGGCATC...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp GAGGTTCATTCAGCTCTAAATCCCATTCTTTGGACTTaGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: EVHSALNPILWT*PKFQSRLAAVP
Trigger: GGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGGGATTTAGAGCTGAATGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACATTAGCAGTACACAATaGGCATGTATAAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDISSTQ*ACISST
Trigger: TGTGCTGCTTATACATGCTCATTGTGTACTGCTAAT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGCTAAGTGGCCACATATaGATCCCGCAGTTCACTGGA +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLLSGHI*IPQFTG
Trigger: TCCAGTGAACTGCGGGATTCATATGTGGCCACTTAG...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGCTCGCCTGCCCAGGATaGCAGGCAGGAGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLLACPG*QAGGLL
Trigger: GAGCAGCCCTCCTGCCTGTCATCCTGGGCAGGCGAG...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGTCCCTGTCCAGCATATaGCCCGGTGCCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILSLSSI*PGASMT
Trigger: GGTCATGCTGGCACCGGGTCATATGCTGGACAGGGA...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGGGACTTTACAATTTGTaGGCCAATAAACTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQGLYNL*ANKLPP
Trigger: GGGAGGAAGTTTATTGGCTCACAAATTGTAAAGTCC...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGAAGCCTATTTCTGGGTaGTGCCCTCCCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRKPISG*CPPTAP
Trigger: TGGAGCTGTGGGAGGGCAGCACCCAGAAATAGGCTT...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGGTGGAGTTTGAGCACTaGCCAAAGCCTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRVEFEH*PKPPPS
Trigger: AGAGGGTGGAGGCTTTGGGCAGTGCTCAAACTCCAC...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTGTAGCCACTGTATATaGCAGATGCTGCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLECSHCI*QMLLSL
Trigger: TAAAGAGAGCAGCATCTGCCATATACAGTGGCTACA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246194.8
CDS-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGACACTAAGGTCCAGATaGATCAGTATTAGGCACCCT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSETLRSR*ISIRHP
Trigger: AGGGTGCCTAATACTGATCCATCTGGACCTTAGTGT...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAATGGATTGGGGCTTTTaGCTCAGGTATGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLMDWGF*LRYEAR
Trigger: TCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCAT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATTGGCCAAGCATGGATTaGGGCTTTTGGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYWPSMD*GFWLRY
Trigger: ATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCA...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCGGCAATGGCCAAGCATaGATTGGGGCTTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVGNGQA*IGAFGS
Trigger: TGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGGCCAGGGTATTGAAATaGGTCTGTTATAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLARVLK*VCYSWL
Trigger: GAGCCAGCTATAACAGACCCATTTCAATACCCTGGC...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTCTAAATCCCATTCTTTaGACTTTGCCCAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDALNPIL*TLPKFQ
Trigger: TTGGAACTTGGGCAAAGTCCAAAGAATGGGATTTAG...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGCCAGGGTCATCAACCTaGCTGGCAGCAACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILPGSST*LAATGG
Trigger: TCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGG...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCAAAACCAAGGATGCCTaGCTCAGAATCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELKTKDA*LRIFCS
Trigger: AGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTT...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGAATCTGGCTACTGGTaGAGGGATTTTGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEESGYW*RDFDLP
Trigger: AGGCAAATCAAAATCCCTCCACCAGTAGCCAGATTC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTTTTTATTATCTCTCATaGTGCTGGGCTTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAFYYLS*CWALNG
Trigger: GCCATTCAAAGCCCAGCACCATGAGAGATAATAAAA...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATGTTACATTGCTTGCCTaGAGCTTCAAGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYVTLLA*SFKDMV
Trigger: CACCATGTCCTTGAAGCTTCAGGCAAGCAATGTAAC...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTGCCGGGATATCTTCATaGGAAAACACAAACCATCCC +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPAGISS*ENTNHP
Trigger: GGGATGGTTTGTGTTTTCTCATGAAGATATCCCGGC...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTAACCTGCCCGGAGTGTaGAGAACTTGTGTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPNLPGV*RTCVFC
Trigger: ACAAAACACACAAGTTCTTCACACTCCGGGCAGGTT...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGCAGATCTGCAAACTTTaGTCAACACGTAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEQICKL*STRKDG
Trigger: TCCATCTTTACGTGTTGATCAAAGTTTGCAGATCTG...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGAAAACATCTAAAGACTaGTCCTTTAGGCAGAATCCG +
Preference number: 4 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEKTSKD*SFRQNP
Trigger: CGGATTCTGCCTAAAGGATCAGTCTTTAGATGTTTT...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATACAACAGTCAGTAACTaGACAAAGGCCCATTTACTA +
Preference number: 4 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDTTVSN*TKAHLL
Trigger: TAGTAAATGGGCCTTTGTTCAGTTACTGACTGTTGT...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATTTTGGAACTCAGCCATaGTGTCTAGAATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYFGTQP*CLESWV
Trigger: GACCCAGGATTCTAGACATCATGGCTGAGTTCCAAA...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGTCTTGTTGGTTACATTaGTTGCCTGAAGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSESCWLH*LPEASR
Trigger: CCTTGAAGCTTCAGGCAAGCAATGTAACCAACAAGA...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGAAACTTCCTACTGATTaGTGTCACTGGAGTACGCTC +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLKLPTD*CHWSTL
Trigger: GAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCCTGCGTGTCTCCGGATaGAAACTTCCTACTGATTGC +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSLRVSG*KLPTDC
Trigger: GCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAG...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCTGCTTGGGTAGGACCTaGAGCAGGCATATAGCACTA +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVCLGRT*SRHIAL
Trigger: TAGTGCTATATGCCTGCTGCAGGTCCTACCCAAGCA...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAAGCTGTTTCCTCCTTTaGGTTACAGGGTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKSCFLL*VTGSAP
Trigger: TGGTGCTGACCCTGTAACCCAAAGGAGGAAACAGCT...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGGTCCGTGCTTCCCCCTaGGGCAGGCCTGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLVRASP*GRPASE
Trigger: TTCTGAGGCAGGCCTGCCCCAGGGGGAAGCACGGAC...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAATGGCCAAGCATGGATTaGGGCTTTTGGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKWPSMD*GFWLRY
Trigger: ATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCA...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTGTTGCGCAGCGGAATaGATGTTTTTGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRCCAAE*MFLLPR
Trigger: TCGGGGCAGCAAAAACATCCATTCCGCTGCGCAACA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAATCACCATCTCCTTCTaGAGTTTTCAGATGTTAGAA +
Preference number: 4 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSITISF*SFQMLE
Trigger: TTCTAACATCTGAAAACTCCAGAAGGAGATGGTGAT...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGAATCTGGCTACTGGTaGAGGGATTTTGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLESGYW*RDFDLP
Trigger: AGGCAAATCAAAATCCCTCCACCAGTAGCCAGATTC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGCAGGTGTTCAGGAAATaGTTTACTGTTATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQQVFRK*FTVMEE
Trigger: TTCCTCCATAACAGTAAACCATTTCCTGAACACCTG...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCCATCGATATTGGACTTaGTCTGTGTCAGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSHRYWT*SVSAPS
Trigger: AGACGGAGCTGACACAGATCAAGTCCAATATCGATG...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGCAGATCTGCAAACTTTaGTCAACACGTAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEQICKL*STRKDG
Trigger: TCCATCTTTACGTGTTGATCAAAGTTTGCAGATCTG...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGAGCTCTTCAGGGAGATaGGGCACTCCTTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILSSSGR*GTPCRP
Trigger: AGGTCTGCAAGGAGTGCCTCATCTCCCTGAAGAGCT...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCTGCGTGTCTCCGGATaGAAACTTCCTACTGATTGC +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLRVSG*KLPTDC
Trigger: GCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCGAAGCTTCAAGGACATaGTGCCCACCAGTAACAATG +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVEASRT*CPPVTM
Trigger: CATTGTTACTGGTGGGCACCATGTCCTTGAAGCTTC...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTCCTCTGGTACCCGCTaGGGGGTGGCATCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLSSGTR*GVASRV
Trigger: AACCCTGGATGCCACCCCCCAGCGGGTACCAGAGGA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCAATCCTTTTAAGAGCTaGGAAAGACCAGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELNPFKS*ERPDLE
Trigger: TTCTAAGTCTGGTCTTTCCCAGCTCTTAAAAGGATT...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTTGGATCCATTCATTGTaGGGAATGAAGGGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPWIHSL*GMKGEV
Trigger: TACTTCCCCCTTCATTCCCCACAATGAATGGATCCA...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTATGGATTGGGGCTTTTaGCTCAGGTATGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RMPGSESFALLCLLYFCGMDWGF*LRYEAR
Trigger: TCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCAT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGATGTGGGTACATGGATaGGTGAAGTATGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLMWVHG*VKYVPL
Trigger: CAGTGGAACATACTTCACCCATCCATGTACCCACAT...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAAAAGATGTGGGTACATaGATGGGTGAAGTATGTTCC +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLKDVGT*MGEVCS
Trigger: GGAACATACTTCACCCATCCATGTACCCACATCTTT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp AGGGATGGCAAATACCTGACGCTCACGTGCCCACACTaGAATTCCATGCTCATAAGAGAAACTGCCAAACTA +
Preference number: 4 (lower is better)
Translates to: RDGKYLTLTCPH*NSMLIRETAKL
Trigger: TAGTTTGGCAGTTTCTCTTATGAGCATGGAATTCAAGTGTGGGCACGTGAGCGTCAGGTATTTGCCATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAATCTCTCTTGGGAACTTaGACATGGGGAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKSLLGT*TWGKWI
Trigger: GATCCATTTTCCCCATGTTCAAGTTCCCAAGAGAGA...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCTCTCTCTTGGGAACTTaGACATGGGGAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: PGSESFALLCLLYFCGLVSLLGT*TWGKWI
Trigger: GATCCATTTTCCCCATGTTCAAGTTCCCAAGAGAGA...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGAAAACATCTAAAGACTaGTCCTTTAGGCAGAATCCG +
Preference number: 4 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLKTSKD*SFRQNP
Trigger: CGGATTCTGCCTAAAGGATCAGTCTTTAGATGTTTT...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAACTTTCAAGATGGCTGTaGGGATCACAAATGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKLSRWL*GSQMRL
Trigger: AAGCCTCATTTGTGATCCTCACAGCCATCTTGAAAG...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTTTGGAACTCAGCCATaGTGTCTAGAATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRFGTQP*CLESWV
Trigger: GACCCAGGATTCTAGACATCATGGCTGAGTTCCAAA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCTTGGGCTTAGCCATGTaGCTTACTTTGGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSLGLAM*LTLAKR
Trigger: TCTTTTGGCCAAAGTAAGTCACATGGCTAAGCCCAA...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCCATTCTTTGGACTTTaGCCAAGTTCCAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRPFFGL*PSSNPG
Trigger: GCCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGGATGAAAACCAAGGATaGCTGGCTCAGAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLDENQG*LAQNLL
Trigger: CAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATC...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGCAGAGGACATGGCACTaGCTGGGATGCGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLQRTWH*LGCVGG
Trigger: TCCCCCAACGCATCCCAGCCAGTGCCATGTCCTCTG...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAACACTAAGGTCCAGATaGATCAGTATTAGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKTLRSR*ISIRHP
Trigger: AGGGTGCCTAATACTGATCCATCTGGACCTTAGTGT...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGAGAGAAGGTAGAGACTaGCAGACTCTAGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLREGRD*QTLESF
Trigger: AAAGGATTCTAGAGTCTGCCAGTCTCTACCTTCTCT...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTACTGATTGCTGTCACTaGAGTACGCTCTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: RMPGSESFALLCLLYFCGTDCCH*STLYSL
Trigger: CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGT...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGGGCCCCAGCAGAGCTTaGGAATATCAAAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILGPSRA*EYQSTE
Trigger: CTCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCC...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGGCTGCCCAGGGTCCATaGCAAGCAAATATATGGGGA +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILAAQGP*QANIWG
Trigger: TCCCCATATATTTGCTTGCCATGGACCCTGGGCAGC...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGTTCTCTTGCGGTTTTTaGAACTCAGCCATGATGTCT +
Preference number: 4 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLFSCGF*NSAMMS
Trigger: AGACATCATGGCTGAGTTCCAAAAACCGCAAGAGAA...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAATGTCTGAAGATCCCTaGACTTTACAATTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLMSEDP*TLQFVS
Trigger: GCTCACAAATTGTAAAGTCCAGGGATCTTCAGACAT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTTATCTCTCATGGTGCTaGGCTTTGAATGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: RMPGSESFALLCLLYFCGYLSWC*ALNGIS
Trigger: ACTGATGCCATTCAAAGCCCAGCACCATGAGAGATA...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp TGGGATGAAAACCAAGGATGCCTGGCTCAGAATCTTTaGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: WDENQGCLAQNL*LCFAFSISVVL
Trigger: CAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCTTGGTTTTCATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGGATGCCTGCTACCCTTaGAGGTATCTTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILDACYP*RYLPCF
Trigger: AAAGCAGGGAAGATACCTTCAAGGGTAGCAGGCATC...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTTGTGAGGATCACAAATaGGGCTTTCAATCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: ALQAAATKSSELASEMSPCEDHK*GFQSEN
Trigger: GTTTTCAGATTGAAAGCCTCATTTGTGATCCTCACA...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATTATTTCCAAACAGTCTaGAAATTGCTGCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYYFQTV*KLLQIL
Trigger: GAGGATCTGCAGCAATTTTCAGACTGTTTGGAAATA...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATACCTCAATCAATCAATaGTCTGGTTGGGATGAAAAC +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYTSINQ*SGWDEN
Trigger: GTTTTCATCCCAACCAGATCATTGATTGATTGAGGT...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGTCCGTCTTGATGGCCTaGAGCTCACTGCTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILSVLMA*SSLLFN
Trigger: GTTAAAGAGCAGTGAGCTGCAGGCCATCAAGACGGA...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGCTCATAAGAGAAACTaGCAAACTATCATGTCAGTA +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLAHKRN*QTIMSV
Trigger: TACTGACATGATAGTTTGGCAGTTTCTCTTATGAGC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGATGCCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTTGGCTCAGAATCTTTTaGTCTGCTTTGCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RMPGSESFALLCLLYFCGWLRIF*SALPSL
Trigger: TAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCA...ACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGGCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAGGAGGGATTTTGATTTaGCTAAAACCTCAATCAATC +
Preference number: 4 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLGGILI*LKPQSI
Trigger: GATTGATTGAGGTTTTAGGCAAATCAAAATCCCTCC...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTTGTTAGCCAAGCCTTaGTCTCCTTTTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLLAKP*SPFGDS
Trigger: AGAATCCCCAAAAGGAGAGCAAGGCTTGGCTAACAA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGCCTCAGCCTCCACCATaGGCTCTTGACAAATCTCTA +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILPQPPP*ALDKSL
Trigger: TAGAGATTTGTCAAGAGCCCATGGTGGAGGCTGAGG...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATCAGGTGTTCAGGAAATaGTTTACTGTTATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYQVFRK*FTVMEE
Trigger: TTCCTCCATAACAGTAAACCATTTCCTGAACACCTG...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp CTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTaGTCAGACAGGCCTACTGCATATAACATCCTATGG +
Preference number: 4 (lower is better)
Translates to: LLLCFAFSISVV*SDRPTAYNILW
Trigger: CCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTTGAAGGAACCCGGCTaGTTGTTAGAGAACAAATGT +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLKEPG*LLENKC
Trigger: ACATTTGTTCTCTAACAATCAGCCGGGTTCCTTCAA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAACAACAGTCAGTAACTaGACAAAGGCCCATTTACTA +
Preference number: 4 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKTTVSN*TKAHLL
Trigger: TAGTAAATGGGCCTTTGTTCAGTTACTGACTGTTGT...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCTATTTCCAAACAGTCTaGAAATTGCTGCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: IDITTQWMPVFVSQALLSYFQTV*KLLQIL
Trigger: GAGGATCTGCAGCAATTTTCAGACTGTTTGGAAATA...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCTAAATCCCATTCTTTaGACTTTGCCCAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLNPIL*TLPKFQ
Trigger: TTGGAACTTGGGCAAAGTCCAAAGAATGGGATTTAG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTGTTGCGCAGCGGAATaGATGTTTTTGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLCCAAE*MFLLPR
Trigger: TCGGGGCAGCAAAAACATCCATTCCGCTGCGCAACA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp CAAACAACGTTTTATTATCTCTCATGGTGCTGGGCTTaGAATGGCATCAGTGAGGCAGTTCTTACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: QTTFYYLSWCWA*NGISEAVLTLF
Trigger: GAACAAAGTAAGAACTGCCTCACTGATGCCATTCAAAGCCCAGCACCATGAGAGATAATAAAACGTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGGGACTTTACAATTTGTaGGCCAATAAACTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLWRKFIMKNLATGGGILGLYNL*ANKLPP
Trigger: GGGAGGAAGTTTATTGGCTCACAAATTGTAAAGTCC...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGGATGGTCTCCACATCTaGTTTCTTCACCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLDGLHI*FLHQSC
Trigger: ACAGCTCTGGTGAAGAAATCAGATGTGGAGACCATC...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGCATCGATATTGGACTTaGTCTGTGTCAGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLHRYWT*SVSAPS
Trigger: AGACGGAGCTGACACAGATCAAGTCCAATATCGATG...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTTGGGCTTAGCCATGTaGCTTACTTTGGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLLGLAM*LTLAKR
Trigger: TCTTTTGGCCAAAGTAAGTCACATGGCTAAGCCCAA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGACTGATTGCTGTCACTaGAGTACGCTCTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLTDCCH*STLYSL
Trigger: CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGT...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTTGAAGGAACCCGGCTaGTTGTTAGAGAACAAATGT +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLLKEPG*LLENKC
Trigger: ACATTTGTTCTCTAACAATCAGCCGGGTTCCTTCAA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR TCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGTTCCTCTCTCATGTCTaGCATTTGATACTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLFLSHV*HLILLS
Trigger: TGACAGCAGTATCAAATGTCAGACATGAGAGAGGAA...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR GCA 90 bp AGGTGTTCAGGAAATGGTTTACTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTCATAAGAGAAACTaGCAAACTATCATGTCAGTA +
Preference number: 4 (lower is better)
Translates to: RCSGNGLLLWRKFIMKNLAHKRN*QTIMSV
Trigger: TACTGACATGATAGTTTGGCAGTTTCTCTTATGAGC...CAGATTCTTCATAATAAACTTCCTCCATAACAGTAAACCATTTCCTGAACACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
3UTR CAA 72 bp TTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTaGATTTGCCTAAAACCTCAATCAATCAATGATCTG +
Preference number: 4 (lower is better)
Translates to: FIMKNLATGGGI*ICLKPQSINDL
Trigger: CAGATCATTGATTGATTGAGGTTTTAGGCAAATCAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp CGCCGTCGCCGCCGCTACCGCCCCCTCAGCTTCTCTGGGTTCCGCTaGCCCGAGCTGGCGCCGCTCGCGCGCCCCGCCGCACTGACAGCG +
Preference number: 5 (lower is better)
Translates to: RRRRRYRPLSFSGFR*PELAPLARPAALTA
Trigger: CGCTGTCAGTGCGGCGGGGCGCGCGAGCGGCGCCAGCTCGGGGCAGCGGAACCCAGAGAAGCTGAGGGGGCGGTAGCGGCGGCGACGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375114.7
ENST00000413297.5
ENST00000448364.5
CDS CCA 90 bp GGACGTAAGGGAGGGAGGAAAAGGGCGGCTGCGGCGGGAAGAGGCTaGGCACACGCGCGGGAGTCGTCGTCGTCGCCGTCGCCGCCGCTA +
Preference number: 5 (lower is better)
Translates to: GRKGGRKRAAAAGRG*AHARESSSSPSPPL
Trigger: TAGCGGCGGCGACGGCGACGACGACGACTCCCGCGCGTGTGCCCAGCCTCTTCCCGCCGCAGCCGCCCTTTTCCTCCCTCCCTTACGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000413297.5
ENST00000448364.5
CDS GCA 90 bp CCGAGAGGTCTGGAGGAAGCCGCGCGGCTGGGAAGGAGGCGGTACTaGCGCACTCGGGGACGTAAGGGAGGGAGGAAAAGGGCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: PRGLEEAARLGRRRY*RTRGRKGGRKRAAA
Trigger: CGCAGCCGCCCTTTTCCTCCCTCCCTTACGTCCCCGAGTGCGGCAGTACCGCCTCCTTCCCAGCCGCGCGGCTTCCTCCAGACCTCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000413297.5
ENST00000448364.5
CDS CCA 90 bp AGGGACTGTGACCCGGGGTCGCTTCACAGGGACCGCCCTGGGCACTaGCACGGGCGACAGACGGCCCCGGTAGTCGAAGAGCCTGTCGTA +
Preference number: 5 (lower is better)
Translates to: RDCDPGSLHRDRPGH*HGRQTAPVVEEPVV
Trigger: TACGACAGGCTCTTCGACTACCGGGGCCGTCTGTCGCCCGTGCCAGTGCCCAGGGCGGTCCCTGTGAAGCGACCCCGGGTCACAGTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000448364.5
ENST00000488227.1
CDS CCA 90 bp CGCCGCTCCGGCCCTGGTTCCGGGCTCTCCTCCTTCTCTGTCTCCTaGGAAGGACACGGTGACACGAGCACGAGGAGTCTGCAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RRSGPGSGLSSFSVS*EGHGDTSTRSLQPR
Trigger: GCGGGGCTGCAGACTCCTCGTGCTCGTGTCACCGTGTCCTTCCCAGGAGACAGAGAAGGAGGAGAGCCCGGAACCAGGGCCGGAGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375114.7
ENST00000448364.5
CDS GCA 90 bp GGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCACCTaGTGGTGGCCATTGCTCCTGTCAGGCTGCTTACTGCAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GWVPGLRPGAAMPFT*WWPLLLSGCLLQGP
Trigger: GGGGCCTTGCAGTAAGCAGCCTGACAGGAGCAATGGCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS CCA 90 bp AGGGACTGTGACCCGGGGTCGCTTCACAGGGACCGCCCTGGGCACTaGCACGGGCGACAGACGGCCCCGGTAGTCGAAGAGCCTGTATAT +
Preference number: 5 (lower is better)
Translates to: RDCDPGSLHRDRPGH*HGRQTAPVVEEPVY
Trigger: ATATACAGGCTCTTCGACTACCGGGGCCGTCTGTCGCCCGTGCCAGTGCCCAGGGCGGTCCCTGTGAAGCGACCCCGGGTCACAGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375114.7
ENST00000442805.1
ENST00000493399.1
CDS-3UTR CAA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCGGGTGGCATCCAGGGTaGGGTGCCCGGCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAGWHPG*GARLEA
Trigger: GGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS CCA 90 bp TGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCACCTGCTaGTGGCCATTGCTCCTGTCAGGCTGCTTACTGCAAGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: WVPGLRPGAAMPFTC*WPLLLSGCLLQGPI
Trigger: GATGGGGCCTTGCAGTAAGCAGCCTGACAGGAGCAATGGCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGGGTGGCATCCAGGGTaGGGTGCCCGGCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: FQGACFSPHACISWPQGLGWHPG*GARLEA
Trigger: GGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS CCA 90 bp CGCCGCCGGCGCCACCTCCATCACCCTTCTTCTTGCCATCTGGATTaGCCTTTTGCTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RRRRHLHHPSSCHLD*PFAPQRSAPSGSAG
Trigger: CCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGGAGGTGGCGCCGGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
CDS-3UTR CAA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGGGTTGGGTGCCCGGCTaGAGGCCTGGGGCAGCGATG +
Preference number: 5 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWGWVPG*RPGAAM
Trigger: CATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACC...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp GCTGTGTGTCAGGAGCCCTTCCTCATCGCCGTCGTCTCGGGTCCGTaGTTCCCCCTGGGGCAGGCCTGCCTCAGAAGTTGTGTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: AVCQEPFLIAVVSGP*FPLGQACLRSCVLL
Trigger: CAAGAGAACACAACTTCTGAGGCAGGCCTGCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGGAAGGGCTCCTGACACACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246194.8
ENST00000375114.7
ENST00000481580.1
CDS-3UTR CAA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGACTGGCTGGGATGCGTaGGGGGAGGAGGCGCCTGCT +
Preference number: 5 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQTGWDA*GEEAPA
Trigger: AGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAGT...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTAGGCCCCAGCAGAGCTaGGGAATATCAAAGCACAGA +
Preference number: 5 (lower is better)
Translates to: GWHPGLGARLEAWGSDALRPQQS*GISKHR
Trigger: TCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCCT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTATGGCCAAGCATGGATaGGGGCTTTTGGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GWHPGLGARLEAWGSDALMAKHG*GLLAQV
Trigger: TACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCAT...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS CCA 90 bp AAGTTCACAGTGGGGGCAACCAGCTCAGGCTGCCCATTCCCCTGTTaGCCTCCTGAGAGTAGGAGCACAGTCGAGTCCCAGTCGTGCCCC +
Preference number: 5 (lower is better)
Translates to: KFTVGATSSGCPFPC*PPESRSTVESQSCP
Trigger: GGGGCACGACTGGGACTCGACTGTGCTCCTACTCTCAGGAGGCCAACAGGGGAATGGGCAGCCTGAGCTGGTTGCCCCCACTGTGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481580.1
CDS-3UTR CAA 90 bp GGGTGGCATCCAGGGTTGGGTGCCCGGCTTGAGGCCTGGGGCAGCGATGCCCTTCCATCACCCTTCTTCTaGCCATCTGGATTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GWHPGLGARLEAWGSDALPSPFF*PSGLAF
Trigger: AAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGG...AAGGGCATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACCCTGGATGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCAGAACGTGTGGCCCAGTaGCCCAGCCAACCACCTGAC +
Preference number: 5 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPERVAQ*PSQPPD
Trigger: GTCAGGTGGTTGGCTGGGCAACTGGGCCACACGTTC...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp AAAAACCCACCTCCTGGCTGTGGCCTCCACAAGCCACCCCAGCCCTaGTCTGAAGCTCTGCAGGCCGTGTGTGCTCCCTTATGTCCGAAT +
Preference number: 5 (lower is better)
Translates to: KNPPPGCGLHKPPQP*SEALQAVCAPLCPN
Trigger: ATTCGGACATAAGGGAGCACACACGGCCTGCAGAGCTTCAGAGCAGGGCTGGGGTGGCTTGTGGAGGCCACAGCCAGGAGGTGGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481580.1
CDS-3UTR CAA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACGGCTCTCCAGCCATGTaGATGTCCAGGGTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHGSPAM*MSRVCP
Trigger: CGGGCAGACCCTGGACATCAACATGGCTGGAGAGCC...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGGTTGGGTGCCCGGCTaGAGGCCTGGGGCAGCGATG +
Preference number: 5 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEGWVPG*RPGAAM
Trigger: CATCGCTGCCCCAGGCCTCAAGCCGGGCACCCAACC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp GCGCCACCTCCATCACCCTTCTTCTTGCCATCTGGATTGGCCTTTTaGTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGGGCATCGATA +
Preference number: 5 (lower is better)
Translates to: APPPSPFFLPSGLAF*SAAICSKRLSRASI
Trigger: TATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGGAGGTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
CDS-3UTR CAA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCTGTGTCAGCTCCGTCTaGATGGCCTGCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPCVSSV*MACSSL
Trigger: CAGTGAGCTGCAGGCCATCAAGACGGAGCTGACACA...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCGCGGAATGGATGTTTTaGCTGCCCCGACTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: FQGACFSPHACISWPQGLAEWMF*LPRLRG
Trigger: TCCTCTGAGTCGGGGCAGCAAAAACATCCATTCCGC...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp GAATCTCCCATTCTCCAACTCATGTGGAAACCGGAGGCCAGAATGTaGCCGCATTTGGGGGAGGTCTGCCCTAGGCCTCAGTGGGACTTC +
Preference number: 5 (lower is better)
Translates to: ESPILQLMWKPEARM*PHLGEVCPRPQWDF
Trigger: GAAGTCCCACTGAGGCCTAGGGCAGACCTCCCCCAAATGCGGGCACATTCTGGCCTCCGGTTTCCACATGAGTTGGAGAATGGGAGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481580.1
CDS CCA 90 bp TTCTCCAACTCATGTGGAAACCGGAGGCCAGAATGTGCCCGCATTTaGGGGAGGTCTGCCCTAGGCCTCAGTGGGACTTCTGATGGTGTC +
Preference number: 5 (lower is better)
Translates to: FSNSCGNRRPECARI*GRSALGLSGTSDGV
Trigger: GACACCATCAGAAGTCCCACTGAGGCCTAGGGCAGACCTCCCCCAAATGCGGGCACATTCTGGCCTCCGGTTTCCACATGAGTTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481580.1
CDS-3UTR CAA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGAGACCAGCTTTTTGGTaGGCAGAGGGGCCGGGATAT +
Preference number: 5 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWRPAFW*AEGPGY
Trigger: ATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCT...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCAGTACGCTCTATTCCTaGCTACCAAACCTGCCCGGA +
Preference number: 5 (lower is better)
Translates to: FQGACFSPHACISWPQGLSTLYS*LPNLPG
Trigger: TCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACT...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCCCATTCTTTGGACTTaGCCCAAGTTCCAATCCAGG +
Preference number: 5 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAPILWT*PKFQSR
Trigger: CCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGGG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCTCTCGATGGCAGCTTTaGAACCCAAGTCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: FQGACFSPHACISWPQGLSRWQL*NPSPHV
Trigger: GACATGGGGACTTGGGTTCAAAAGCTGCCATCGAGA...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCATGCTCTACCACTTCTaGGAACCTGCCCGAAAACCA +
Preference number: 5 (lower is better)
Translates to: TCPGSSTWLAATGGKSQAMLYHF*EPARKP
Trigger: TGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCAT...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS CCA 90 bp CGTGTGTGCTCCCTTATGTCCGAATCTCCCATTCTCCAACTCATGTaGAAACCGGAGGCCAGAATGTGCCCGCATTTGGGGGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RVCSLMSESPILQLM*KPEARMCPHLGEVC
Trigger: GCAGACCTCCCCCAAATGCGGGCACATTCTGGCCTCCGGTTTCCACATGAGTTGGAGAATGGGAGATTCGGACATAAGGGAGCACACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481580.1
CDS-3UTR CAA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGGTGGGTCACAACTGCTaGACACTTCAGCCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQVGHNC*TLQPAR
Trigger: TCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCAC...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCTTGAATTTTTCTGTGTaGGGGGAAGGCTTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: TCPGSSTWLAATGGKSQALNFSV*GEGFQR
Trigger: CCTCTGGAAGCCTTCCCCCAACACAGAAAAATTCAA...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACTTGCCCAGGGTCATCAACCTGGCTGGCAGCAACAGGGGGAAAGTCCCAGGCCCTTCTCTTGCGGTTTTaGGAACTCAGCCATGATGTC +
Preference number: 5 (lower is better)
Translates to: TCPGSSTWLAATGGKSQALLLRF*ELSHDV
Trigger: GACATCATGGCTGAGTTCCAAAAACCGCAAGAGAAG...GGCCTGGGACTTTCCCCCTGTTGCTGCCAGCCAGGTTGATGACCCTGGGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGTCATGGTGCTGGGCTTaGAATGGCATCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQSWCWA*NGISEA
Trigger: TGCCTCACTGATGCCATTCAAAGCCCAGCACCATGA...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp GTGTCCTCCTCTGTGCTGGCACTGTGGAGATGCTGGGAAACACCGTaGTCACCAGTCTTCTGCTCTACTTGCTTTTCAAGAAGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: VSSSVLALWRCWETP*SPVFCSTCFSRSPL
Trigger: GAGGGGGCTTCTTGAAAAGCAAGTAGAGCAGAAGACTGGTGAGCACGGTGTTTCCCAGCATCTCCACAGTGCCAGCACAGAGGAGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448364.5
CDS-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGGCTCTCTTTAGCCCCTaGGGTCTGTCAGGCTTAGGC +
Preference number: 5 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEALFSP*GLSGLG
Trigger: GCCTAAGCCTGACAGACCCAAGGGGCTAAAGAGAGC...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATGCTCTCTTTAGCCCCTaGGGTCTGTCAGGCTTAGGC +
Preference number: 5 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDALFSP*GLSGLG
Trigger: GCCTAAGCCTGACAGACCCAAGGGGCTAAAGAGAGC...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GATGGGACTCTCGTTCTCCCTGTCCAGCATATGACCCGGTGCCAGCATGACCAGGAGCGGGCAAAGAGCTaGACAGGTACGTTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: DGTLVLPVQHMTRCQHDQERAKS*TGTLVL
Trigger: CAAAACTAACGTACCTGTCAAGCTCTTTGCCCGCTC...CTGGTCATGCTGGCACCGGGTCATATGCTGGACAGGGAGAACGAGAGTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAACTGGCTGGGATGCGTaGGGGGAGGAGGCGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKTGWDA*GEEAPA
Trigger: AGCAGGCGCCTCCTCCCCCAACGCATCCCAGCCAGT...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACAGGCCCCAGCAGAGCTaGGGAATATCAAAGCACAGA +
Preference number: 5 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHRPQQS*GISKHR
Trigger: TCTGTGCTTTGATATTCCCAAGCTCTGCTGGGGCCT...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTCTCAGTAAAGCATGCTaGGGTAGGACCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDALSKAC*GRTCSR
Trigger: CCTGCTGCAGGTCCTACCCAAGCATGCTTTACTGAG...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TCAGCCAGCAAGATGCTCATGGGCCAGCATATCCAACCCTCCCCAGTGGCCCCACTTCTCTTGCGGTTTTaGGAACTCAGCCATGATGTC +
Preference number: 5 (lower is better)
Translates to: SASKMLMGQHIQPSPVAPLLLRF*ELSHDV
Trigger: GACATCATGGCTGAGTTCCAAAAACCGCAAGAGAAG...TGGGGCCACTGGGGAGGGTTGGATATGCTGGCCCATGAGCATCTTGCTGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp CCCTTCTTCTTGCCATCTGGATTGGCCTTTTGCTCCGCAGCGATCTaGTCCAAGCGGCTCAGCAGGGCATCGATATTGGACTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: PFFLPSGLAFCSAAI*SKRLSRASILDLIC
Trigger: ACAGATCAAGTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
ENST00000493399.1
CDS-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTACAGGTACGTTAGTTTaGACACGCCGGACCAAAGGG +
Preference number: 5 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDATGTLV*TRRTKG
Trigger: CCCTTTGGTCCGGCGTGTCAAAACTAACGTACCTGT...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGTGTGTCAGCTCCGTCTaGATGGCCTGCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: RREQAIKEQSEGLGDFSECVSSV*MACSSL
Trigger: CAGTGAGCTGCAGGCCATCAAGACGGAGCTGACACA...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGATCTGGATTGGCCTTTaGCTCCGCAGCGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEIWIGL*LRSDLL
Trigger: GAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGAT...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTGTGGGTCACAACTGCTaGACACTTCAGCCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAVGHNC*TLQPAR
Trigger: TCTTGCTGGCTGAAGTGTCAAGCAGTTGTGACCCAC...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGAGGCAGTTCTTACTTaGTTCTCAGACGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSEAVLT*FSDGGW
Trigger: CCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TGGACTTTGCCCAAGTTCCAATCCAGGCTAGCAGCTGTCCCCCATGTTTCACAGACAGGTACGTTAGTTTaGACACGCCGGACCAAAGGG +
Preference number: 5 (lower is better)
Translates to: WTLPKFQSRLAAVPHVSQTGTLV*TRRTKG
Trigger: CCCTTTGGTCCGGCGTGTCAAAACTAACGTACCTGT...CTGTGAAACATGGGGGACAGCTGCTAGCCTGGATTGGAACTTGGGCAAAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCAGCATCGATATTGGACTaGATCTGTGTCAGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSASILD*ICVSSV
Trigger: GACGGAGCTGACACAGATCAAGTCCAATATCGATGC...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTCCATCACCCTTCTTCTaGCCATCTGGATTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: RQGQTGCVSPDANFLLIAPSPFF*PSGLAF
Trigger: AAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGG...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GGCAATGGCCAAGCATGGATTGGGGCTTTTGGCTCAGGTATGAAGCCAGAACTCAGTACGCTCTATTCCTaGCTACCAAACCTGCCCGGA +
Preference number: 5 (lower is better)
Translates to: GNGQAWIGAFGSGMKPELSTLYS*LPNLPG
Trigger: TCCGGGCAGGTTTGGTAGCAAGGAATAGAGCGTACT...GAGTTCTGGCTTCATACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGCAGGAGGAGTACGTGCCAGGCCTGGAACAAAGCCTATTTCTGGGTGCTGCCCGTAGACCGGGTTGGTTaGAAATGGGGAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: SRRSTCQAWNKAYFWVLPVDRVG*KWGVFN
Trigger: ATTGAAAACTCCCCATTTCAAACCAACCCGGTCTAC...GGGCAGCACCCAGAAATAGGCTTTGTTCCAGGCCTGGCACGTACTCCTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTGTAGACCGGGTTGGTTaGAAATGGGGAGTTTTCAAT +
Preference number: 5 (lower is better)
Translates to: IPRGLFLTPCLHLMASGPVDRVG*KWGVFN
Trigger: ATTGAAAACTCCCCATTTCAAACCAACCCGGTCTAC...AGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAACTTCCCGGTGGAGTTaGAGCACTGCCCAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLTSRWS*STAQSL
Trigger: GAGGCTTTGGGCAGTGCTCAAACTCCACCGGGAAGT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAGAACGTGTGGCCCAGTaGCCCAGCCAACCACCTGAC +
Preference number: 5 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKERVAQ*PSQPPD
Trigger: GTCAGGTGGTTGGCTGGGCAACTGGGCCACACGTTC...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTCTCGATGGCAGCTTTaGAACCCAAGTCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: MASVRQFLLCSQTVAGLESRWQL*NPSPHV
Trigger: GACATGGGGACTTGGGTTCAAAAGCTGCCATCGAGA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCAGCTGTTTCCTCCTTaGGGTTACAGGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLQLFPP*GYRVST
Trigger: GGTGCTGACCCTGTAACCCAAAGGAGGAAACAGCTG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCATTGAATTTTTCTGTGTaGGGGGAAGGCTTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSLNFSV*GEGFQR
Trigger: CCTCTGGAAGCCTTCCCCCAACACAGAAAAATTCAA...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCCTCCACCCTCTACCAAAACATGGAGCCAAAGCCCAGGAGGAAGCTTCCCTGGACTGGTGGAGGGATTTaGATTTGCCTAAAACCTCAA +
Preference number: 5 (lower is better)
Translates to: ASTLYQNMEPKPRRKLPWTGGGI*ICLKPQ
Trigger: TTGAGGTTTTAGGCAAATCAAAATCCCTCCACCAGT...CCAGGGAAGCTTCCTCCTGGGCTTTGGCTCCATGTTTTGGTAGAGGGTGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACAGTGGATGCCTGTTTTaGTTAGCCAAGCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDSGCLF*LAKPCS
Trigger: AGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTCAGCTGTTTCCTCCTTaGGGTTACAGGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: ALQAAATKSSELASEMSPQLFPP*GYRVST
Trigger: GGTGCTGACCCTGTAACCCAAAGGAGGAAACAGCTG...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGACAGGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTTGTTGGTTACATTGCTaGCCTGAAGCTTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: RQGQTGCVSPDANFLLIACWLHC*PEASRT
Trigger: TGTCCTTGAAGCTTCAGGCAAGCAATGTAACCAACA...AGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTCACTGCTCTTTAACTaGATCTTGGCTGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: MASVRQFLLCSQTVAGLESLLFN*ILAELV
Trigger: CACCAGCTCAGCCAAGATCAAGTTAAAGAGCAGTGA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGCATCGATATTGGACTaGATCTGTGTCAGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEASILD*ICVSSV
Trigger: GACGGAGCTGACACAGATCAAGTCCAATATCGATGC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TTCCAAGGGGCCTGTTTCTCACCCCATGCCTGCATCTCATGGCCTCAGGGCCTCTTTTTGATGATGGGATaGAATTTTTCTGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: FQGACFSPHACISWPQGLFLMMG*NFSVLG
Trigger: CCCCAACACAGAAAAATTCAATCCCATCATCAAAAA...GAGGCCCTGAGGCCATGAGATGCAGGCATGGGGTGAGAAACAGGCCCCTTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGCTCAGTAAAGCATGCTaGGGTAGGACCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLLSKAC*GRTCSR
Trigger: CCTGCTGCAGGTCCTACCCAAGCATGCTTTACTGAG...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGTCTATTTCTGTGGTCTaGTCAGACAGGCCTACTGCA +
Preference number: 5 (lower is better)
Translates to: MASVRQFLLCSQTVAGLESISVV*SDRPTA
Trigger: TGCAGTAGGCCTGTCTGACAAGACCACAGAAATAGA...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGCTGGCTCAGAATCTTTaGCTCTGCTTTGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: MASVRQFLLCSQTVAGLELAQNL*LCFAFS
Trigger: AGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAG...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATAGTGGATGCCTGTTTTaGTTAGCCAAGCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDSGCLF*LAKPCS
Trigger: AGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACT...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAAGCAGGGCATCGATATaGGACTTGATCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLSRASI*DLICVS
Trigger: GCTGACACAGATCAAGTCCAATATCGATGCCCTGCT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCATCTGGATTGGCCTTTaGCTCCGCAGCGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: IDITTQWMPVFVSQALLSIWIGL*LRSDLL
Trigger: GAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGAT...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGCTCTGGGGGCAGTGCCTAGTGCTATTGTGCCCTCAGTGTGAGGTTCATTCACCATCTCAGAACAGGTaGGGATCCAATCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: RLWGQCLVLLCPQCEVHSPSQNR*GSNLFI
Trigger: AATAAAGAGATTGGATCCCAACCTGTTCTGAGATGG...TGAATGAACCTCACACTGAGGGCACAATAGCACTAGGCACTGCCCCCAGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCAGACCAGCTTTTTGGTaGGCAGAGGGGCCGGGATAT +
Preference number: 5 (lower is better)
Translates to: PGSESFALLCLLYFCGLVRPAFW*AEGPGY
Trigger: ATATCCCGGCCCCTCTGCCAACCAAAAAGCTGGTCT...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTGAAAGAGATAAGGTCTaGACCTACTATGGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAERDKV*TYYGVN
Trigger: GTTTACCCCATAGTAGGTCAAGACCTTATCTCTTTC...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTTCAAGCTCTGAAACGTaGAGTTCCTCAGTAAAGCAT +
Preference number: 5 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDASSSET*SSSVKH
Trigger: ATGCTTTACTGAGGAACTCAACGTTTCAGAGCTTGA...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GGGGCAGACAGGCTGCGTGTCTCCGGATGCAAACTTCCTACTGATTGCTGTCACACTAAAAGTTCTGAGTaGGCAAGTGAAATGAGTCCT +
Preference number: 5 (lower is better)
Translates to: GADRLRVSGCKLPTDCCHTKSSE*ASEMSP
Trigger: AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGT...GTGACAGCAATCAGTAGGAAGTTTGCATCCGGAGACACGCAGCCTGTCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TCAGACGGTGGCTGGGCTGGAGTCATCTTGAAGCCTTCCTCTCTCATGTCTGACACTGGTGGAGGGATTTaGATTTGCCTAAAACCTCAA +
Preference number: 5 (lower is better)
Translates to: SDGGWAGVILKPSSLMSDTGGGI*ICLKPQ
Trigger: TTGAGGTTTTAGGCAAATCAAAATCCCTCCACCAGT...GTCAGACATGAGAGAGGAAGGCTTCAAGATGACTCCAGCCCAGCCACCGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTAATGCTCTACCACTTCTaGGAACCTGCCCGAAAACCA +
Preference number: 5 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLMLYHF*EPARKP
Trigger: TGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCAT...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATTCATGGTGCTGGGCTTaGAATGGCATCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYSWCWA*NGISEA
Trigger: TGCCTCACTGATGCCATTCAAAGCCCAGCACCATGA...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CTGAGGAAACTGAGACCTGGTAAGGAAAAAGACTTGCCCAGGGTCATCAACCTGCTCTTTAACTTGATCTaGGCTGAGCTGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: LRKLRPGKEKDLPRVINLLFNLI*AELVVT
Trigger: TGTCACCACCAGCTCAGCCAAGATCAAGTTAAAGAG...CAGGTTGATGACCCTGGGCAAGTCTTTTTCCTTACCAGGTCTCAGTTTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTACTCTTTAACTTGATCTaGGCTGAGCTGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLLFNLI*AELVVT
Trigger: TGTCACCACCAGCTCAGCCAAGATCAAGTTAAAGAG...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGGATCCAATCTCTTTATaGTCAGGGTCCCCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLDPISL*SGSPPC
Trigger: ACAGGGAGGGGACCCTGACAATAAAGAGATTGGATC...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATGATCCAATCTCTTTATaGTCAGGGTCCCCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYDPISL*SGSPPC
Trigger: ACAGGGAGGGGACCCTGACAATAAAGAGATTGGATC...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATCCATCTCAGAACAGGTaGGGATCCAATCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDPSQNR*GSNLFI
Trigger: AATAAAGAGATTGGATCCCAACCTGTTCTGAGATGG...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATCTCCACCATGGGCTCTaGACAAATCTCTACTCTCTC +
Preference number: 5 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYLHHGL*TNLYSL
Trigger: GAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGGAG...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CCTGGCTCAGAATCTTTTGCTCTGCTTTGCCTTCTCTATTTCTGTGGTCTTGTCGAGGCAGTTCTTACTTaGTTCTCAGACGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PGSESFALLCLLYFCGLVEAVLT*FSDGGW
Trigger: CCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTC...GACAAGACCACAGAAATAGAGAAGGCAAAGCAGAGCAAAAGATTCTGAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CCAGTATACCCACTGGCTGCTCTATTCTTTCAAGATGGCTGTGAGGATCACAAAAGCAGGGCATCGATATaGGACTTGATCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PVYPLAALFFQDGCEDHKSRASI*DLICVS
Trigger: GCTGACACAGATCAAGTCCAATATCGATGCCCTGCT...TTTGTGATCCTCACAGCCATCTTGAAAGAATAGAGCAGCCAGTGGGTATACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AGGAGAGAACAGGCAATTAAAGAGCAGTCGGAGGGTCTGGGAGACTTCTCAGAGGAAAGAGATAAGGTCTaGACCTACTATGGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: RREQAIKEQSEGLGDFSEERDKV*TYYGVN
Trigger: GTTTACCCCATAGTAGGTCAAGACCTTATCTCTTTC...CTCTGAGAAGTCTCCCAGACCCTCCGACTGCTCTTTAATTGCCTGTTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATACTAAAAGTTCTGAGTaGGCAAGTGAAATGAGTCCT +
Preference number: 5 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDTKSSE*ASEMSP
Trigger: AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGT...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCAGGTTATGACCTTACGGGTCAACCTGGCCAGGGATGGCAAATACCTGACGCTTGGAGGGATTTTGATTaGCCTAAAACCTCAATCAAT +
Preference number: 5 (lower is better)
Translates to: AGYDLTGQPGQGWQIPDAWRDFD*PKTSIN
Trigger: ATTGATTGAGGTTTTAGGCAAATCAAAATCCCTCCA...AGCGTCAGGTATTTGCCATCCCTGGCCAGGTTGACCCGTAAGGTCATAACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp GCACTCCAGGCAGCTGCTACTAAAAGTTCTGAGTTGGCAAGTGAAATGAGTCCTTTTGTTAGCCAAGCCTaGCTCTCCTTTTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: ALQAAATKSSELASEMSPFVSQA*LSFWGF
Trigger: GAATCCCCAAAAGGAGAGCAAGGCTTGGCTAACAAA...AGGACTCATTTCACTTGCCAACTCAGAACTTTTAGTAGCAGCTGCCTGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS GCA 90 bp CATTCTTGTTGGTTACATTGCTTGCCTGAAGCTTCAAGGACATGGTaGCCACTTAACAAACATTTCTTGAGTGTCCTCCTCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: HSCWLHCLPEASRTW*PLNKHFLSVLLCAG
Trigger: GCCAGCACAGAGGAGGACACTCAAGAAATGTTTGTTAAGTGGGCACCATGTCCTTGAAGCTTCAGGCAAGCAATGTAACCAACAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448364.5
CDS-3UTR CAA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGGAGCGGGCAAAGAGCTaGACAGGTACGTTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRERAKS*TGTLVL
Trigger: CAAAACTAACGTACCTGTCAAGCTCTTTGCCCGCTC...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCTCCACCATGGGCTCTaGACAAATCTCTACTCTCTC +
Preference number: 5 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLHHGL*TNLYSL
Trigger: GAGAGAGTAGAGATTTGTCAAGAGCCCATGGTGGAG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGCCCATTCTTTGGACTTaGCCCAAGTTCCAATCCAGG +
Preference number: 5 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRPILWT*PKFQSR
Trigger: CCTGGATTGGAACTTGGGCAAAGTCCAAAGAATGGG...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TGGCCACATATGAATCCCGCAGTTCACTGGACCAGGGTAGGTACTTGTAACCTATCAAGCTCTGAAACGTaGAGTTCCTCAGTAAAGCAT +
Preference number: 5 (lower is better)
Translates to: WPHMNPAVHWTRVGTCNLSSSET*SSSVKH
Trigger: ATGCTTTACTGAGGAACTCAACGTTTCAGAGCTTGA...TAGGTTACAAGTACCTACCCTGGTCCAGTGAACTGCGGGATTCATATGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ACAGGCCCTATGGCCATGCTCTACCACTTCTTGGAACCTGCCCGAAAACCAGATTTAAGGCTACTAAATTaGGGGGTGGTTTGTTATACA +
Preference number: 5 (lower is better)
Translates to: TGPMAMLYHFLEPARKPDLRLLN*GVVCYT
Trigger: TGTATAACAAACCACCCCCAAATTTAGTAGCCTTAA...ATCTGGTTTTCGGGCAGGTTCCAAGAAGTGGTAGAGCATGGCCATAGGGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp ATGGCATCAGTGAGGCAGTTCTTACTTTGTTCTCAGACGGTGGCTGGGCTGGAGAAATATGGCCATATTTaGAAGCTCCTCCTGTTAAGA +
Preference number: 5 (lower is better)
Translates to: MASVRQFLLCSQTVAGLEKYGHI*KLLLLR
Trigger: TCTTAACAGGAGGAGCTTCAAAATATGGCCATATTT...CTCCAGCCCAGCCACCGTCTGAGAACAAAGTAAGAACTGCCTCACTGATGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS TCA 90 bp TTAGCTGTAGACCATAAGGTTTTTCAGGGGATAAGAAGGCACTTGTaGGGCTGTCTTCTGGTGATATCAGGATCCTTGCCATCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: LAVDHKVFQGIRRHL*GCLLVISGSLPSSV
Trigger: GACTGAAGATGGCAAGGATCCTGATATCACCAGAAGACAGCCTCACAAGTGCCTTCTTATCCCCTGAAAAACCTTATGGTCTACAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489384.1
CDS-3UTR CAA 90 bp ATAGACATAACCACACAGTGGATGCCTGTTTTTGTTAGCCAAGCCTTGCTCTCCTGTTGGTTACATTGCTaGCCTGAAGCTTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: IDITTQWMPVFVSQALLSCWLHC*PEASRT
Trigger: TGTCCTTGAAGCTTCAGGCAAGCAATGTAACCAACA...GGAGAGCAAGGCTTGGCTAACAAAAACAGGCATCCACTGTGTGGTTATGTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTCACTGCTCTTTAACTaGATCTTGGCTGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRSLLFN*ILAELV
Trigger: CACCAGCTCAGCCAAGATCAAGTTAAAGAGCAGTGA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp TCCGGATGCAAACTTCCTACTGATTGCTGTCACTGGAGTACGCTCTATTCCTTGTTCTCTCTTGGGAACTaGAACATGGGGAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: SGCKLPTDCCHWSTLYSLFSLGN*NMGKMD
Trigger: ATCCATTTTCCCCATGTTCAAGTTCCCAAGAGAGAA...CAAGGAATAGAGCGTACTCCAGTGACAGCAATCAGTAGGAAGTTTGCATCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CTGTGGTCTTGTCAGACAGGCCTACTGCATATAACATCCTATGGGGCAGGTTATTTCTCTCTTGGGAACTaGAACATGGGGAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: LWSCQTGLLHITSYGAGYFSLGN*NMGKMD
Trigger: ATCCATTTTCCCCATGTTCAAGTTCCCAAGAGAGAA...ATAACCTGCCCCATAGGATGTTATATGCAGTAGGCCTGTCTGACAAGACCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp CTGTTATGGAGGAAGTTTATTATGAAGAATCTGGCTACTGGTGGAGGGATTTTGATGGCCAAGCATGGATaGGGGCTTTTGGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: LLWRKFIMKNLATGGGILMAKHG*GLLAQV
Trigger: TACCTGAGCCAAAAGCCCCAATCCATGCTTGGCCAT...CAAAATCCCTCCACCAGTAGCCAGATTCTTCATAATAAACTTCCTCCATAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTTAAGGCTACTAAATTaGGGGGTGGTTTGTTATACA +
Preference number: 5 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRLRLLN*GVVCYT
Trigger: TGTATAACAAACCACCCCCAAATTTAGTAGCCTTAA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS-3UTR CAA 90 bp AAAGGCCCATTTACTATCCCTGATCCAGATCAACCTCTCATTTTACAGCTGAGGTGGAGGGATTTTGATTaGCCTAAAACCTCAATCAAT +
Preference number: 5 (lower is better)
Translates to: KGPFTIPDPDQPLILQLRWRDFD*PKTSIN
Trigger: ATTGATTGAGGTTTTAGGCAAATCAAAATCCCTCCA...CCTCAGCTGTAAAATGAGAGGTTGATCTGGATCAGGGATAGTAAATGGGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS CCA 72 bp TCGCCGTCGCCGCCGCTACCGCCCCCTCAGCTTCTCTaGGTTCCGCTGCCCCGAGCTGGCGCCGCTCGCGCG +
Preference number: 6 (lower is better)
Translates to: SPSPPLPPPQLL*VPLPRAGAARA
Trigger: CGCGCGAGCGGCGCCAGCTCGGGGCAGCGGAACCCAGAGAAGCTGAGGGGGCGGTAGCGGCGGCGACGGCGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000246194.8
ENST00000375114.7
ENST00000413297.5
ENST00000448364.5
CDS CCA 72 bp GACCCGGGGTCGCTTCACAGGGACCGCCCTGGGCACTaGCACGGGCGACAGACGGCCCCGGTAGTCGAAGAG +
Preference number: 6 (lower is better)
Translates to: DPGSLHRDRPGH*HGRQTAPVVEE
Trigger: CTCTTCGACTACCGGGGCCGTCTGTCGCCCGTGCCAGTGCCCAGGGCGGTCCCTGTGAAGCGACCCCGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000448364.5
ENST00000488227.1
ENST00000493399.1
CDS GCA 72 bp CTGGAGGAAGCCGCGCGGCTGGGAAGGAGGCGGTACTaGCGCACTCGGGGACGTAAGGGAGGGAGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: LEEAARLGRRRY*RTRGRKGGRKR
Trigger: CCTTTTCCTCCCTCCCTTACGTCCCCGAGTGCGGCAGTACCGCCTCCTTCCCAGCCGCGCGGCTTCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000413297.5
ENST00000448364.5
CDS CAA 90 bp CCGCCGCCGGCGCCACCTCCATCACCCTTCTTCTTGCCATCTGGATaGGCCTTTTGCTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PPPAPPPSPFFLPSG*AFCSAAICSKRLSR
Trigger: CCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGGAGGTGGCGCCGGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
CDS CCA 72 bp TCCTCATCGCCGTCGTCTCGGGTCCGTGCTTCCCCCTaGGGCAGGCCTGCCTCAGAAGTTGTGTTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SSSPSSRVRASP*GRPASEVVFSW
Trigger: CCAAGAGAACACAACTTCTGAGGCAGGCCTGCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246194.8
ENST00000375114.7
ENST00000481580.1
CDS CCA 72 bp GGCCCTGGTTCCGGGCTCTCCTCCTTCTCTGTCTCCTaGGAAGGACACGGTGACACGAGCACGAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: GPGSGLSSFSVS*EGHGDTSTRSL
Trigger: CAGACTCCTCGTGCTCGTGTCACCGTGTCCTTCCCAGGAGACAGAGAAGGAGGAGAGCCCGGAACCAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375114.7
ENST00000448364.5
CDS CCA 72 bp TTGAGGCCTGGGGCAGCGATGCCCTTCACCTGCTGGTaGCCATTGCTCCTGTCAGGCTGCTTACTGCAAGGC +
Preference number: 6 (lower is better)
Translates to: LRPGAAMPFTCW*PLLLSGCLLQG
Trigger: GCCTTGCAGTAAGCAGCCTGACAGGAGCAATGGCCACCAGCAGGTGAAGGGCATCGCTGCCCCAGGCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000375114.7
CDS CAA 90 bp GGCGCCACCTCCATCACCCTTCTTCTTGCCATCTGGATTGGCCTTTaGCTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGGGCATCGAT +
Preference number: 6 (lower is better)
Translates to: GATSITLLLAIWIGL*LRSDLLQAAQQGID
Trigger: ATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGGAGGTGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
CDS CCA 72 bp GCCGGCGCCACCTCCATCACCCTTCTTCTTGCCATCTaGATTGGCCTTTTGCTCCGCAGCGATCTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: AGATSITLLLAI*IGLLLRSDLLQ
Trigger: TTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGGAGGTGGCGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
CDS CAA 90 bp GTGACAGCTGTGGAGCGGGCAAAGAGCTTGACAGGTACGTTAGTTTaGACACGCCGGACCAAAGGGACTGTGACCCGGGGTCGCTTCACA +
Preference number: 6 (lower is better)
Translates to: VTAVERAKSLTGTLV*TRRTKGTVTRGRFT
Trigger: TGTGAAGCGACCCCGGGTCACAGTCCCTTTGGTCCGGCGTGTCAAAACTAACGTACCTGTCAAGCTCTTTGCCCGCTCCACAGCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000448364.5
ENST00000488227.1
ENST00000493399.1
CDS CAA 90 bp GCAGCGATCTGCTCCAAGCGGCTCAGCAGGGCATCGATATTGGACTaGATCTGTGTCAGCTCCGTCTTGATGGCCTGCAGCTCACTGCTC +
Preference number: 6 (lower is better)
Translates to: AAICSKRLSRASILD*ICVSSVLMACSSLL
Trigger: GAGCAGTGAGCTGCAGGCCATCAAGACGGAGCTGACACAGATCAAGTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
ENST00000493399.1
CDS CAA 90 bp TGCTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGGGCATCGATATaGGACTTGATCTGTGTCAGCTCCGTCTTGATGGCCTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: CSAAICSKRLSRASI*DLICVSSVLMACSS
Trigger: TGAGCTGCAGGCCATCAAGACGGAGCTGACACAGATCAAGTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
ENST00000493399.1
CDS GCA 72 bp CCATCACCCTTCTTCTTGCCATCTGGATTGGCCTTTTaGTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PSPFFLPSGLAF*SAAICSKRLSR
Trigger: CCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
CDS GCA 72 bp ATTCTCCAACTCATGTGGAAACCGGAGGCCAGAATGTaGCCGCATTTGGGGGAGGTCTGCCCTAGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: ILQLMWKPEARM*PHLGEVCPRPQ
Trigger: CTGAGGCCTAGGGCAGACCTCCCCCAAATGCGGGCACATTCTGGCCTCCGGTTTCCACATGAGTTGGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481580.1
CDS CAA 72 bp GTGGAGCGGGCAAAGAGCTTGACAGGTACGTTAGTTTaGACACGCCGGACCAAAGGGACTGTGACCCGGGGT +
Preference number: 6 (lower is better)
Translates to: VERAKSLTGTLV*TRRTKGTVTRG
Trigger: ACCCCGGGTCACAGTCCCTTTGGTCCGGCGTGTCAAAACTAACGTACCTGTCAAGCTCTTTGCCCGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000448364.5
ENST00000488227.1
ENST00000493399.1
CDS GCA 72 bp TTGCCATCTGGATTGGCCTTTTGCTCCGCAGCGATCTaGTCCAAGCGGCTCAGCAGGGCATCGATATTGGAC +
Preference number: 6 (lower is better)
Translates to: LPSGLAFCSAAI*SKRLSRASILD
Trigger: GTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
ENST00000493399.1
CDS CAA 72 bp TGCTCCAAGCGGCTCAGCAGGGCATCGATATTGGACTaGATCTGTGTCAGCTCCGTCTTGATGGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CSKRLSRASILD*ICVSSVLMACS
Trigger: GCTGCAGGCCATCAAGACGGAGCTGACACAGATCAAGTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
ENST00000493399.1
CDS CAA 72 bp GCGATCTGCTCCAAGCGGCTCAGCAGGGCATCGATATaGGACTTGATCTGTGTCAGCTCCGTCTTGATGGCC +
Preference number: 6 (lower is better)
Translates to: AICSKRLSRASI*DLICVSSVLMA
Trigger: GGCCATCAAGACGGAGCTGACACAGATCAAGTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
ENST00000493399.1
CDS CAA 72 bp TCCATCACCCTTCTTCTTGCCATCTGGATTGGCCTTTaGCTCCGCAGCGATCTGCTCCAAGCGGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SITLLLAIWIGL*LRSDLLQAAQQ
Trigger: CTGCTGAGCCGCTTGGAGCAGATCGCTGCGGAGCAAAAGGCCAATCCAGATGGCAAGAAGAAGGGTGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000481580.1
CDS CAA 90 bp ATCTTGGCTGAGCTGGTGGTGACAGCTGTGGAGCGGGCAAAGAGCTaGACAGGTACGTTAGTTTTGACACGCCGGACCAAAGGGACTGTG +
Preference number: 6 (lower is better)
Translates to: ILAELVVTAVERAKS*TGTLVLTRRTKGTV
Trigger: CACAGTCCCTTTGGTCCGGCGTGTCAAAACTAACGTACCTGTCAAGCTCTTTGCCCGCTCCACAGCTGTCACCACCAGCTCAGCCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000448364.5
ENST00000488227.1
ENST00000493399.1
CDS TCA 72 bp GACATGGTGCCCACCTGCATGGTAGGAGTACACACATaGGACGTGAGGGGACAGGGAGGCACTCCAACTTTA +
Preference number: 6 (lower is better)
Translates to: DMVPTCMVGVHT*DVRGQGGTPTL
Trigger: TAAAGTTGGAGTGCCTCCCTGTCCCCTCACGTCTCATGTGTGTACTCCTACCATGCAGGTGGGCACCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413297.5
CDS CAA 72 bp GAGCTGGTGGTGACAGCTGTGGAGCGGGCAAAGAGCTaGACAGGTACGTTAGTTTTGACACGCCGGACCAAA +
Preference number: 6 (lower is better)
Translates to: ELVVTAVERAKS*TGTLVLTRRTK
Trigger: TTTGGTCCGGCGTGTCAAAACTAACGTACCTGTCAAGCTCTTTGCCCGCTCCACAGCTGTCACCACCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000448364.5
ENST00000488227.1
ENST00000493399.1
CDS GCA 72 bp TGGAGATGCTGGGAAACACCGTGCTCACCAGTCTTCTaGTCTACTTGCTTTTCAAGAAGCCCCCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: WRCWETPCSPVF*STCFSRSPLSG
Trigger: CCCAGAGAGGGGGCTTCTTGAAAAGCAAGTAGAGCAGAAGACTGGTGAGCACGGTGTTTCCCAGCATCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448364.5
CDS CCA 72 bp TCCCTTATGTCCGAATCTCCCATTCTCCAACTCATGTaGAAACCGGAGGCCAGAATGTGCCCGCATTTGGGG +
Preference number: 6 (lower is better)
Translates to: SLMSESPILQLM*KPEARMCPHLG
Trigger: CCCCAAATGCGGGCACATTCTGGCCTCCGGTTTCCACATGAGTTGGAGAATGGGAGATTCGGACATAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481580.1
CDS CAA 72 bp CCACTGTATATGGCAGATGCTGCTCTCTTTAGCCCCTaGGGTCTGTCAGGCTTAGGCTCTCCAGCCATGTTG +
Preference number: 6 (lower is better)
Translates to: PLYMADAALFSP*GLSGLGSPAML
Trigger: CAACATGGCTGGAGAGCCTAAGCCTGACAGACCCAAGGGGCTAAAGAGAGCAGCATCTGCCATATACAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246194.8
ENST00000448364.5
CDS CAA 72 bp AGCCTGTATATGGCAGATGCTGCTCTCTTTAGCCCCTaGGGTCTGTCAGGCTTAGGCTCTCCAGCCATGTTG +
Preference number: 6 (lower is better)
Translates to: SLYMADAALFSP*GLSGLGSPAML
Trigger: CAACATGGCTGGAGAGCCTAAGCCTGACAGACCCAAGGGGCTAAAGAGAGCAGCATCTGCCATATACAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375114.7
ENST00000442805.1
ENST00000493399.1
CDS CAA 72 bp CTGGGAAACACCGTGCTCACCAGTCTTCTGCTCTACTaGCTTTTCAAGAAGCCCCCTCTCTGGGAACCAGTA +
Preference number: 6 (lower is better)
Translates to: LGNTVLTSLLLY*LFKKPPLWEPV
Trigger: TACTGGTTCCCAGAGAGGGGGCTTCTTGAAAAGCAAGTAGAGCAGAAGACTGGTGAGCACGGTGTTTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448364.5
CDS CAA 90 bp CTCAGCAGGGCATCGATATTGGACTTGATCTGTGTCAGCTCCGTCTaGATGGCCTGCAGCTCACTGCTCTTTAACTTGATCTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: LSRASILDLICVSSV*MACSSLLFNLILAE
Trigger: CTCAGCCAAGATCAAGTTAAAGAGCAGTGAGCTGCAGGCCATCAAGACGGAGCTGACACAGATCAAGTCCAATATCGATGCCCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000493399.1
CDS CAA 90 bp GTGGAGATGCTGGGAAACACCGTGCTCACCAGTCTTCTGCTCTACTaGCTTTTCAAGAAGCCCCCTCTCTGGGAACCAGTAACAATGATG +
Preference number: 6 (lower is better)
Translates to: VEMLGNTVLTSLLLY*LFKKPPLWEPVTMM
Trigger: CATCATTGTTACTGGTTCCCAGAGAGGGGGCTTCTTGAAAAGCAAGTAGAGCAGAAGACTGGTGAGCACGGTGTTTCCCAGCATCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448364.5
CDS TCA 72 bp CTTCAAGGACATGGTGCCCACTTAACAAACATTTCTTaGGTGTCCTCCTCTGTGCTGGCACTGTGGAGATGC +
Preference number: 6 (lower is better)
Translates to: LQGHGAHLTNIS*VSSSVLALWRC
Trigger: GCATCTCCACAGTGCCAGCACAGAGGAGGACACTCAAGAAATGTTTGTTAAGTGGGCACCATGTCCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448364.5
CDS GCA 72 bp TTGGACTTGATCTGTGTCAGCTCCGTCTTGATGGCCTaGAGCTCACTGCTCTTTAACTTGATCTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: LDLICVSSVLMA*SSLLFNLILAE
Trigger: CTCAGCCAAGATCAAGTTAAAGAGCAGTGAGCTGCAGGCCATCAAGACGGAGCTGACACAGATCAAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000493399.1
CDS CAA 72 bp GCTTCAAGGACATGGTGCCCACTTAACAAACATTTCTaGAGTGTCCTCCTCTGTGCTGGCACTGTGGAGATG +
Preference number: 6 (lower is better)
Translates to: ASRTWCPLNKHF*SVLLCAGTVEM
Trigger: CATCTCCACAGTGCCAGCACAGAGGAGGACACTCAAGAAATGTTTGTTAAGTGGGCACCATGTCCTTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448364.5
CDS CAA 72 bp GCATCGATATTGGACTTGATCTGTGTCAGCTCCGTCTaGATGGCCTGCAGCTCACTGCTCTTTAACTTGATC +
Preference number: 6 (lower is better)
Translates to: ASILDLICVSSV*MACSSLLFNLI
Trigger: GATCAAGTTAAAGAGCAGTGAGCTGCAGGCCATCAAGACGGAGCTGACACAGATCAAGTCCAATATCGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000333552.9
ENST00000375114.7
ENST00000442805.1
ENST00000493399.1
CDS TCA 72 bp CACACGGCCATACTTAGAGAAGATGGTCTCCACATCTaGTTTCTTCACCAGAGCTGTGTTGAGGTTTCCAAT +
Preference number: 6 (lower is better)
Translates to: HTAILREDGLHI*FLHQSCVEVSN
Trigger: ATTGGAAACCTCAACACAGCTCTGGTGAAGAAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000246194.8
ENST00000375114.7
ENST00000413297.5
ENST00000442805.1
ENST00000448364.5
CDS TCA 72 bp GCCATGTTGATGTTTAGAGAAGATGGTCTCCACATCTaGTTTCTTCACCAGAGCTGTGTTGAGGTTTCCAAT +
Preference number: 6 (lower is better)
Translates to: AMLMFREDGLHI*FLHQSCVEVSN
Trigger: ATTGGAAACCTCAACACAGCTCTGGTGAAGAAATCAGATGTGGAGACCATCTTCTCTAAACATCAACATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493399.1
CDS TCA 72 bp AAAGATGTAGCCATTAGAGAAGATGGTCTCCACATCTaGTTTCTTCACCAGAGCTGTGTTGAGGTTTCCAAT +
Preference number: 6 (lower is better)
Translates to: KDVAIREDGLHI*FLHQSCVEVSN
Trigger: ATTGGAAACCTCAACACAGCTCTGGTGAAGAAATCAGATGTGGAGACCATCTTCTCTAATGGCTACATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333552.9