RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RALGAPB (Homo sapiens)

Ensembl gene IDs: ENSG00000170471

Ensembl transcript IDs: ENST00000262879.11, ENST00000397040.5, ENST00000397042.7, ENST00000438490.2, ENST00000461147.1, ENST00000461423.1, ENST00000490114.1, ENST00000495949.1, ENST00000632792.1

Found 1036 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGTAAGGTATGGGTATCCCATATTCCACTGGCTCCGTACACACTaGGAGTTTCATGCCTTCAGGGGCTGCACATCCTTCCTTCCCTGG +
Preference number: 1 (lower is better)
Translates to: LVRYGYPIFHWLRTH*EFHAFRGCTSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATACCTTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 90 bp AGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTaGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGGCTGCACA +
Preference number: 1 (lower is better)
Translates to: RRNQRLVRYGYPIFH*LRTHWEFHAFRGCT
Trigger: TGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 90 bp GGCAGATGTTATTGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATaGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCA +
Preference number: 1 (lower is better)
Translates to: GRCYCEQKEPAPGKV*VSHIPLAPYTLGVS
Trigger: TGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACAATAACATCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 90 bp GAGTATGCGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTaGTTAGTCCTTTCAAAGGCCCAATGGATGGAAGAGGGTCTCAAG +
Preference number: 1 (lower is better)
Translates to: EYASVCVCVCVCVCV*LVLSKAQWMEEGLK
Trigger: CTTGAGACCCTCTTCCATCCATTGGGCCTTTGAAAGGACTAATCAGACACACACACACACACACACACACACACACACACTCGCATACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR CCA 90 bp ATGGTTGTAGCTCTGACCCACAGTCGACTGACATCAGAGTTCAAGTaGGAAAACACCCCTTATACAACTGTGATCATTCCTCTTTGGACT +
Preference number: 1 (lower is better)
Translates to: MVVALTHSRLTSEFK*ENTPYTTVIIPLWT
Trigger: AGTCCAAAGAGGAATGATCACAGTTGTATAAGGGGTGTTTTCCCACTTGAACTCTGATGTCAGTCGACTGTGGGTCAGAGCTACAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 90 bp GCCAAGCCCTTCAGAGGAGAAAGATGTCTTGGTCACTATAAGAGATaGGGACTTGGGAAACTTGGTTTGCTTCAACAAGTATTTACTGGG +
Preference number: 1 (lower is better)
Translates to: AKPFRGERCLGHYKR*GLGKLGLLQQVFTG
Trigger: CCCAGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCTCATCTCTTATAGTGACCAAGACATCTTTCTCCTCTGAAGGGCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR CCA 90 bp CGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTaGCAAAGTCCAGAAAACATGACAACAGCCATTTCTAACAGTAGC +
Preference number: 1 (lower is better)
Translates to: RGNRSISKTWQGSVG*QSPENMTTAISNSS
Trigger: GCTACTGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 90 bp CCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATaGTTGTTCATGTATCAAATACATTGGAATTACAAGGAGTTGCCA +
Preference number: 1 (lower is better)
Translates to: PWKTRKSPRSQMHST*LFMYQIHWNYKELP
Trigger: TGGCAACTCCTTGTAATTCCAATGTATTTGATACATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 90 bp TCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTAAAATGGTaGATAGAGAACTACTGCCAGCAGCAGTGTCAAATTACCTCCAAT +
Preference number: 1 (lower is better)
Translates to: SVLFRKREPEWALKW*IENYCQQQCQITSN
Trigger: ATTGGAGGTAATTTGACACTGCTGCTGGCAGTAGTTCTCTATTCACCATTTTAAAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR TCA 90 bp TGTTTGTCAATTATGAGGAAATCCAGTAGTTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGGCTATTCCTGAACCCCATATTAGAA +
Preference number: 1 (lower is better)
Translates to: CLSIMRKSSSSLGEI*ISSVERLFLNPILE
Trigger: TTCTAATATGGGGTTCAGGAATAGCCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGAACTACTGGATTTCCTCATAATTGACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 90 bp TTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTaGATGGGCTTTAAAATGGTGAATAGAGAACTACTGCCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: FHVNTAISSFQEERT*MGFKMVNRELLPAA
Trigger: TGCTGCTGGCAGTAGTTCTCTATTCACCATTTTAAAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR GCA 90 bp CATCCTTCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATaGATTCAACATGATTGTTCATGTATCAAATACATTGGAATTACA +
Preference number: 1 (lower is better)
Translates to: HPSFPGRRGSLPDHK*IQHDCSCIKYIGIT
Trigger: TGTAATTCCAATGTATTTGATACATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGAAGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 90 bp AGGAGGTTATCTTTACCTGAGCTTAAAACAAACATGAACAGGTTATaGCAAACTTTAAACCAAGAGCTGCTATGCCCATATTTCTTGCTT +
Preference number: 1 (lower is better)
Translates to: RRLSLPELKTNMNRL*QTLNQELLCPYFLL
Trigger: AAGCAAGAAATATGGGCATAGCAGCTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTTTGTTTTAAGCTCAGGTAAAGATAACCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR GCA 90 bp ACAAACATGAACAGGTTATGGCAAACTTTAAACCAAGAGCTGCTATaGCCATATTTCTTGCTTATAGATGACAAAATGCACATTTCTGGA +
Preference number: 1 (lower is better)
Translates to: TNMNRLWQTLNQELL*PYFLLIDDKMHISG
Trigger: TCCAGAAATGTGCATTTTGTCATCTATAAGCAAGAAATATGGGCATAGCAGCTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 90 bp TTTATTTATTTATTTATTTTTACCACCTACCACAAAACACATCTTTaGGCAAGGCTAACTTCCACTTTGGGTAAAGCTCCACCTTCCAGA +
Preference number: 1 (lower is better)
Translates to: FIYLFIFTTYHKTHL*ARLTSTLGKAPPSR
Trigger: TCTGGAAGGTGGAGCTTTACCCAAAGTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTGGTAGGTGGTAAAAATAAATAAATAAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGGGTCACTCAGAAACTaGGGCTTTCAGACAGATCTG +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRGSLRN*GFQTDL
Trigger: CAGATCTGTCTGAAAGCCTCAGTTTCTGAGTGACCC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGAGTGTGACAGCTGGATaGCAAGAAGACCTACAACTG +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSVTAG*QEDLQL
Trigger: CAGTTGTAGGTCTTCTTGTCATCCAGCTGTCACACT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSLGEI*ISSVER
Trigger: CCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCTGAGTAGAAGGCTGTaGCTTCTTTCCTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCLSRRL*LLSFSS
Trigger: GGAGGAGAAGGAAAGAAGTCACAGCCTTCTACTCAG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAGTGTGACAGCTGGATaGCAAGAAGACCTACAACTG +
Preference number: 2 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLSVTAG*QEDLQL
Trigger: CAGTTGTAGGTCTTCTTGTCATCCAGCTGTCACACT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGAGTGTGATTGTGTCTaGGAGCCCATTTCACTAGAT +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRECDCV*EPISLD
Trigger: ATCTAGTGAAATGGGCTCCCAGACACAATCACACTC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAGTGTGACAGCTGGATaGCAAGAAGACCTACAACTG +
Preference number: 2 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCSVTAG*QEDLQL
Trigger: CAGTTGTAGGTCTTCTTGTCATCCAGCTGTCACACT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTTCTTTTTGTCAGTGTaGCAGCTGGATGACAAGAAG +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRFFLSV*QLDDKK
Trigger: CTTCTTGTCATCCAGCTGTCACACTGACAAAAAGAA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAAC +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFREFRAN*RISKTN
Trigger: GTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CAA 90 bp AAATCCATACTAGTGAAAGAGCTAAGCGTTCTTCCCACTCCCTCTTaGGGCAGATGTTATTGTGAGCAGAAGGAACCAGCGCCTGGTAAG +
Preference number: 2 (lower is better)
Translates to: KSILVKELSVLPTPS*GRCYCEQKEPAPGK
Trigger: CTTACCAGGCGCTGGTTCCTTCTGCTCACAATAACATCTGCCCAAAGAGGGAGTGGGAAGAACGCTTAGCTCTTTCACTAGTATGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTTCTTTTTGTCAGTGTaGCAGCTGGATGACAAGAAG +
Preference number: 2 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLFFLSV*QLDDKK
Trigger: CTTCTTGTCATCCAGCTGTCACACTGACAAAAAGAA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGGTCACTCAGAAACTaGGGCTTTCAGACAGATCTG +
Preference number: 2 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAGSLRN*GFQTDL
Trigger: CAGATCTGTCTGAAAGCCTCAGTTTCTGAGTGACCC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAAC +
Preference number: 2 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLEFRAN*RISKTN
Trigger: GTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCATGCCTTCAGGGGCTaGACATCCTTCCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLHAFRG*TSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTGTCAGTGTGACAGCTaGATGACAAGAAGACCTACA +
Preference number: 2 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCCQCDS*MTRRPT
Trigger: TGTAGGTCTTCTTGTCATCCAGCTGTCACACTGACA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATCTGGCAGGGATCTGTTaGCTGGCAAAGTCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDLAGIC*LAKSRK
Trigger: TTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAG...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTCCATGCTATCAACATaGGTCTTTAAATGTCCTGTA +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSMLST*VFKCPV
Trigger: TACAGGACATTTAAAGACTCATGTTGATAGCATGGA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGGGTCACTCAGAAACTaGGGCTTTCAGACAGATCTG +
Preference number: 2 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSGSLRN*GFQTDL
Trigger: CAGATCTGTCTGAAAGCCTCAGTTTCTGAGTGACCC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDSLGEI*ISSVER
Trigger: CCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCATGTTTGTCAATTATaGGGAAATCCAGTAGTTCTC +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRHVCQL*GNPVVL
Trigger: GAGAACTACTGGATTTCCTCATAATTGACAAACATG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACCTGCAGCAGGTAACTaGCATTACTGGCCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLPAAGN*HYWPKV
Trigger: CACCTTTGGCCAGTAATGTCAGTTACCTGCTGCAGG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGAGAGTGGGGTATCACTaGTGTCTTATAACTTTTAAC +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRRVGYH*CLITFN
Trigger: GTTAAAAGTTATAAGACAGCAGTGATACCCCACTCT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCATCTTTATCCTATATaGCCTCTCCCATGTTACCAT +
Preference number: 2 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLHLYPI*PLPCYH
Trigger: ATGGTAACATGGGAGAGGGCATATAGGATAAAGATG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACATGCCTTCAGGGGCTaGACATCCTTCCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKHAFRG*TSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATGGGCGCCTACTATATaGAAGGCACTGTGGAATCCC +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLWAPTI*KALWNP
Trigger: GGGATTCCACAGTGCCTTGCATATAGTAGGCGCCCA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTGGATGTTCTGGGTCTaGCCACCTCAAAAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLWMFWV*PPQKFY
Trigger: ATAAAACTTTTGAGGTGGCCAGACCCAGAACATCCA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTCCATGCTATCAACATaGGTCTTTAAATGTCCTGTA +
Preference number: 2 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLSMLST*VFKCPV
Trigger: TACAGGACATTTAAAGACTCATGTTGATAGCATGGA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGTCTGAAGAATCACACTaGAGAAGTACATCTGCATCA +
Preference number: 2 (lower is better)
Translates to: HPPPAYPTDIATELFKPQSEESH*RSTSAS
Trigger: TGATGCAGATGTACTTCTTCAGTGTGATTCTTCAGA...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTCCTTCACAAACTACTaGAGTTTGCTGCTTGGTCCT +
Preference number: 2 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLASFTNY*SLLLGP
Trigger: AGGACCAAGCAGCAAACTGCAGTAGTTTGTGAAGGA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGATTTATAGCCTTCTCTaGTCACTTCAACTAGAACAA +
Preference number: 2 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRIYSLL*SLQLEQ
Trigger: TTGTTCTAGTTGAAGTGAGCAGAGAAGGCTATAAAT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCATGCCTTCAGGGGCTaGACATCCTTCCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: GKNSDHELKSILVKELSVHAFRG*TSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTCAGTGTGACAGCTaGATGACAAGAAGACCTACA +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDCQCDS*MTRRPT
Trigger: TGTAGGTCTTCTTGTCATCCAGCTGTCACACTGACA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTTTCTGATCTGTTCCTaGGTCACTCAGAAACTGAGG +
Preference number: 2 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVFLICS*VTQKLR
Trigger: CCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTTTCTGATCTGTTCCTaGGTCACTCAGAAACTGAGG +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDFLICS*VTQKLR
Trigger: CCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTGGCTCCGTACACACTaGGAGTTTCATGCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLWLRTH*EFHAFR
Trigger: CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTTCTTTTTGTCAGTGTaGCAGCTGGATGACAAGAAG +
Preference number: 2 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAFFLSV*QLDDKK
Trigger: CTTCTTGTCATCCAGCTGTCACACTGACAAAAAGAA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTTTGCTGCTTGGTCCTaGAATAAGAGACAATGGATG +
Preference number: 2 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVFAAWS*NKRQWM
Trigger: CATCCATTGTCTCTTATTTCAGGACCAAGCAGCAAA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAAC +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDEFRAN*RISKTN
Trigger: GTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTC...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: HPPPAYPTDIATELFKPQPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAGAGTGGGGTATCACTaGTGTCTTATAACTTTTAAC +
Preference number: 2 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLRVGYH*CLITFN
Trigger: GTTAAAAGTTATAAGACAGCAGTGATACCCCACTCT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTGTCAGTGTGACAGCTaGATGACAAGAAGACCTACA +
Preference number: 2 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSCQCDS*MTRRPT
Trigger: TGTAGGTCTTCTTGTCATCCAGCTGTCACACTGACA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAATCCAGTAGTTCTCTaGGAGAGATCTGAATTAGTA +
Preference number: 2 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLNPVVL*ERSELV
Trigger: TACTAATTCAGATCTCTCCCAGAGAACTACTGGATT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGGATGTTCTGGGTCTaGCCACCTCAAAAGTTTTAT +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDWMFWV*PPQKFY
Trigger: ATAAAACTTTTGAGGTGGCCAGACCCAGAACATCCA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATAATCCTTGGATGTTCTaGGTCTGGCCACCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHNPWMF*VWPPQK
Trigger: CTTTTGAGGTGGCCAGACCCAGAACATCCAAGGATT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACTTTCAAAGGCCCAATaGATGGAAGAGGGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLSKAQ*MEEGLK
Trigger: CTTGAGACCCTCTTCCATCCATTGGGCCTTTGAAAG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACTGAGTAGAAGGCTGTaGCTTCTTTCCTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKLSRRL*LLSFSS
Trigger: GGAGGAGAAGGAAAGAAGTCACAGCCTTCTACTCAG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATTTGCTGCTTGGTCCTaGAATAAGAGACAATGGATG +
Preference number: 2 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSFAAWS*NKRQWM
Trigger: CATCCATTGTCTCTTATTTCAGGACCAAGCAGCAAA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGAGTGTGATTGTGTCTaGGAGCCCATTTCACTAGAT +
Preference number: 2 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHECDCV*EPISLD
Trigger: ATCTAGTGAAATGGGCTCCCAGACACAATCACACTC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAATTATGTCACCCCGCTaGACAATAATGGAGAGAGTG +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLIMSPR*TIMERV
Trigger: CACTCTCTCCATTATTGTCCAGCGGGGTGACATAAT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTGGCAGGGATCTGTTaGCTGGCAAAGTCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGLAGIC*LAKSRK
Trigger: TTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTAATCCTTGGATGTTCTaGGTCTGGCCACCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLNPWMF*VWPPQK
Trigger: CTTTTGAGGTGGCCAGACCCAGAACATCCAAGGATT...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTTGGCTCCGTACACACTaGGAGTTTCATGCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: GKNSDHELKSILVKELSVWLRTH*EFHAFR
Trigger: CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCA...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCTGAAGAATCACACTaGAGAAGTACATCTGCATCA +
Preference number: 2 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSSEESH*RSTSAS
Trigger: TGATGCAGATGTACTTCTTCAGTGTGATTCTTCAGA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTGAAGGAAAATGTGCATaGGTATGCGAGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLEGKCA*VCECVC
Trigger: ACACACACACTCGCATACTCATGCACATTTTCCTTC...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAGAGTGGGGTATCACTaGTGTCTTATAACTTTTAAC +
Preference number: 2 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVRVGYH*CLITFN
Trigger: GTTAAAAGTTATAAGACAGCAGTGATACCCCACTCT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATAACCAAGAGCTGCTATaGCCATATTTCTTGCTTATA +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDNQELL*PYFLLI
Trigger: TATAAGCAAGAAATATGGGCATAGCAGCTCTTGGTT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATAATCCAGTAGTTCTCTaGGAGAGATCTGAATTAGTA +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDNPVVL*ERSELV
Trigger: TACTAATTCAGATCTCTCCCAGAGAACTACTGGATT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAATCCAGTAGTTCTCTaGGAGAGATCTGAATTAGTA +
Preference number: 2 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVNPVVL*ERSELV
Trigger: TACTAATTCAGATCTCTCCCAGAGAACTACTGGATT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAAGTATTTCCAAAACCTaGCAGGGATCTGTTGGCTGG +
Preference number: 2 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKSISKT*QGSVGW
Trigger: CCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACT...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTCCATGCTATCAACATaGGTCTTTAAATGTCCTGTA +
Preference number: 2 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSSMLST*VFKCPV
Trigger: TACAGGACATTTAAAGACTCATGTTGATAGCATGGA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: GKNSDHELKSILVKELSVSLGEI*ISSVER
Trigger: CCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGA...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAAAGTCCAGAAAACATaGCAACAGCCATTTCTAACA +
Preference number: 2 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSKVQKT*QQPFLT
Trigger: TGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATCTGAAGAATCACACTaGAGAAGTACATCTGCATCA +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLSEESH*RSTSAS
Trigger: TGATGCAGATGTACTTCTTCAGTGTGATTCTTCAGA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAACCAAGAGCTGCTATaGCCATATTTCTTGCTTATA +
Preference number: 2 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSNQELL*PYFLLI
Trigger: TATAAGCAAGAAATATGGGCATAGCAGCTCTTGGTT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATATTTATAGCCTTCTCTaGTCACTTCAACTAGAACAA +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDIYSLL*SLQLEQ
Trigger: TTGTTCTAGTTGAAGTGAGCAGAGAAGGCTATAAAT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGCAGAGTCTGACAAATaGTTCCCTAGTGTATGGAGA +
Preference number: 2 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKAESDK*FPSVWR
Trigger: TCTCCATACACTAGGGAAGCATTTGTCAGACTCTGC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTTTCTGATCTGTTCCTaGGTCACTCAGAAACTGAGG +
Preference number: 2 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGFLICS*VTQKLR
Trigger: CCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGATTATGTCACCCCGCTaGACAATAATGGAGAGAGTG +
Preference number: 2 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGIMSPR*TIMERV
Trigger: CACTCTCTCCATTATTGTCCAGCGGGGTGACATAAT...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAATCCAGTAGTTCTCTaGGAGAGATCTGAATTAGTA +
Preference number: 2 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSNPVVL*ERSELV
Trigger: TACTAATTCAGATCTCTCCCAGAGAACTACTGGATT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATAACATGAACAGGTTATaGCAAACTTTAAACCAAGAG +
Preference number: 2 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDNMNRL*QTLNQE
Trigger: CTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACATGTTTGTCAATTATaGGGAAATCCAGTAGTTCTC +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLHVCQL*GNPVVL
Trigger: GAGAACTACTGGATTTCCTCATAATTGACAAACATG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAAAAGTCCAGAAAACATaGCAACAGCCATTTCTAACA +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLKVQKT*QQPFLT
Trigger: TGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTGAAAATGGGCTGCTCTaGAATAAAGGATCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLENGLL*NKGSGN
Trigger: ATTTCCAGATCCTTTATTTCAGAGCAGCCCATTTTC...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATTAAAACAGACCATCTaGCTCCAATGTCATTTCATG +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLKQTI*LQCHFM
Trigger: CATGAAATGACATTGGAGTCAGATGGTCTGTTTTAA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACTGAAGAACATGAGTTaGTATTCTGAGAAACACACT +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLKNMS*YSEKHT
Trigger: AGTGTGTTTCTCAGAATATCAACTCATGTTCTTCAG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGGAATTACAAGGAGTTaGCAGAATTTAGAGCTAACT +
Preference number: 2 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHGITRS*QNLELT
Trigger: AGTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAGAAAAGAGGCTGTCATaGAAATCTTTAAAACAGACC +
Preference number: 2 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLEKRLS*KSLKQT
Trigger: GGTCTGTTTTAAAGATTTCCATGACAGCCTCTTTTC...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGGAAAATGGGCTGCTCTaGAATAAAGGATCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGENGLL*NKGSGN
Trigger: ATTTCCAGATCCTTTATTTCAGAGCAGCCCATTTTC...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCCCACAAACTTTATTTaGATCCCCATTAAAGGACAA +
Preference number: 2 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLPTNFI*IPIKGQ
Trigger: TTGTCCTTTAATGGGGATGCAAATAAAGTTTGTGGG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTACTGGCCAAAGGTGTaGGTACTTGTATTCATCAAT +
Preference number: 2 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGYWPKV*VLVFIN
Trigger: ATTGATGAATACAAGTACCCACACCTTTGGCCAGTA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAAAAGTCCAGAAAACATaGCAACAGCCATTTCTAACA +
Preference number: 2 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKKVQKT*QQPFLT
Trigger: TGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTT...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACTGAAGAACATGAGTTaGTATTCTGAGAAACACACT +
Preference number: 2 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKLKNMS*YSEKHT
Trigger: AGTGTGTTTCTCAGAATATCAACTCATGTTCTTCAG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACCCACAAACTTTATTTaGATCCCCATTAAAGGACAA +
Preference number: 2 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKPTNFI*IPIKGQ
Trigger: TTGTCCTTTAATGGGGATGCAAATAAAGTTTGTGGG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR TCA 72 bp ACAAACCTCTGGACCTTCTTCCCTAACCGACGAAGATaGAACACAGGAGGCAAGGGGCACGGGCACGCCTTC +
Preference number: 3 (lower is better)
Translates to: TNLWTFFPNRRR*NTGGKGHGHAF
Trigger: GAAGGCGTGCCCGTGCCCCTTGCCTCCTGTGTTTCATCTTCGTCGGTTAGGGAAGAAGGTCCAGAGGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR GCA 72 bp CATATTCCACTGGCTCCGTACACACTGGGAGTTTCATaGCTTCAGGGGCTGCACATCCTTCCTTCCCTGGAA +
Preference number: 3 (lower is better)
Translates to: HIPLAPYTLGVS*LQGLHILPSLE
Trigger: TTCCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp CAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTaGCTCCGTACACACTGGGAGTTTCATGCCTTCAGG +
Preference number: 3 (lower is better)
Translates to: QRLVRYGYPIFH*LRTHWEFHAFR
Trigger: CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATACCTTACCAGGCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp TATGGGTATCCCATATTCCACTGGCTCCGTACACACTaGGAGTTTCATGCCTTCAGGGGCTGCACATCCTTC +
Preference number: 3 (lower is better)
Translates to: YGYPIFHWLRTH*EFHAFRGCTSF
Trigger: GAAGGATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp TTTCATGCCTTCAGGGGCTGCACATCCTTCCTTCCCTaGAAGACGAGGAAGTCTCCCAGATCACAAATGCAT +
Preference number: 3 (lower is better)
Translates to: FHAFRGCTSFLP*KTRKSPRSQMH
Trigger: ATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp TATTGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATaGGTATCCCATATTCCACTGGCTCCGTACACACTG +
Preference number: 3 (lower is better)
Translates to: YCEQKEPAPGKV*VSHIPLAPYTL
Trigger: CAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATCCTGGCAGGGATCTGTaGGCTGGCAAAGTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDPGRDL*AGKVQK
Trigger: TTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGG...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCTTCCCACTCCCTCTTaGGGCAGATGTTATTGTGAG +
Preference number: 3 (lower is better)
Translates to: HPPPAYPTDIATELFKPQLPTPS*GRCYCE
Trigger: CTCACAATAACATCTGCCCAAAGAGGGAGTGGGAAG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CAA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGGTGGTCACTCATGTTaGTCAATTATGAGGAAATCC +
Preference number: 3 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRGGHSC*SIMRKS
Trigger: GGATTTCCTCATAATTGACAAACATGAGTGACCACC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGGTGGTCACTCATGTTaGTCAATTATGAGGAAATCC +
Preference number: 3 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLGGHSC*SIMRKS
Trigger: GGATTTCCTCATAATTGACAAACATGAGTGACCACC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTGGAATTACAAGGAGTaGCCAGAATTTAGAGCTAAC +
Preference number: 3 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRWNYKE*PEFRAN
Trigger: GTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGGTGGTCACTCATGTTaGTCAATTATGAGGAAATCC +
Preference number: 3 (lower is better)
Translates to: HPPPAYPTDIATELFKPQGGHSC*SIMRKS
Trigger: GGATTTCCTCATAATTGACAAACATGAGTGACCACC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGTGGAATAAGAGACATTaGCACAGGGAATTAGGTCTC +
Preference number: 3 (lower is better)
Translates to: HPPPAYPTDIATELFKPQWNKRH*HRELGL
Trigger: GAGACCTAATTCCCTGTGCAAATGTCTCTTATTCCA...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR TCA 72 bp AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTaGTTAGTCCTTTCAAAGGCCCAATGGATGGAAGAG +
Preference number: 3 (lower is better)
Translates to: SVCVCVCVCVCV*LVLSKAQWMEE
Trigger: CTCTTCCATCCATTGGGCCTTTGAAAGGACTAATCAGACACACACACACACACACACACACACACACACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR TCA 72 bp ATGAAGGCCTCATACACAGAACCTGCAGCAGGTAACTaGCATTACTGGCCAAAGGTGTGGGTACTTGTATTC +
Preference number: 3 (lower is better)
Translates to: MKASYTEPAAGN*HYWPKVWVLVF
Trigger: GAATACAAGTACCCACACCTTTGGCCAGTAATGTCAGTTACCTGCTGCAGGTTCTGTGTATGAGGCCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR TCA 72 bp AATGCTTCCCTAGTGTATGGAGAAGGTAACCGTTCATaGAGGCCTCATACACAGAACCTGCAGCAGGTAACT +
Preference number: 3 (lower is better)
Translates to: NASLVYGEGNRS*RPHTQNLQQVT
Trigger: AGTTACCTGCTGCAGGTTCTGTGTATGAGGCCTTCATGAACGGTTACCTTCTCCATACACTAGGGAAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR CCA 72 bp AAAGGACAAGGCCATGCTCCATTTCTGATCTGTTCCTaGGTCACTCAGAAACTGAGGCTTTCAGACAGATCT +
Preference number: 3 (lower is better)
Translates to: KGQGHAPFLICS*VTQKLRLSDRS
Trigger: AGATCTGTCTGAAAGCCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAATGGAGCATGGCCTTGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp GCTCTGACCCACAGTCGACTGACATCAGAGTTCAAGTaGGAAAACACCCCTTATACAACTGTGATCATTCCT +
Preference number: 3 (lower is better)
Translates to: ALTHSRLTSEFK*ENTPYTTVIIP
Trigger: AGGAATGATCACAGTTGTATAAGGGGTGTTTTCCCACTTGAACTCTGATGTCAGTCGACTGTGGGTCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCATGTATCAAATACATaGGAATTACAAGGAGTTGCC +
Preference number: 3 (lower is better)
Translates to: HPPPAYPTDIATELFKPQHVSNT*ELQGVA
Trigger: GGCAACTCCTTGTAATTCCAATGTATTTGATACATG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR TCA 72 bp CCACCCAAAGAGGTGGTCACTCATGTTTGTCAATTATaGGGAAATCCAGTAGTTCTCTGGGAGAGATCTGAA +
Preference number: 3 (lower is better)
Translates to: PPKEVVTHVCQL*GNPVVLWERSE
Trigger: TTCAGATCTCTCCCAGAGAACTACTGGATTTCCTCATAATTGACAAACATGAGTGACCACCTCTTTGGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 72 bp TACATGGCTTCTTTAGCTACTAAGAAACCCACCGTTTaGTTCCACATCGTACGGATAGACCACCTCCAATCT +
Preference number: 3 (lower is better)
Translates to: YMASLATKKPTV*FHIVRIDHLQS
Trigger: AGATTGGAGGTGGTCTATCCGTACGATGTGGAATCAAACGGTGGGTTTCTTAGTAGCTAAAGAAGCCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR CCA 72 bp AGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTaGCAAAGTCCAGAAAACATGACAACAGCCATTTCT +
Preference number: 3 (lower is better)
Translates to: RSISKTWQGSVG*QSPENMTTAIS
Trigger: AGAAATGGCTGTTGTCATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 72 bp TGGAATTACAAGGAGTTGCCAGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAACCCTCATACACACACA +
Preference number: 3 (lower is better)
Translates to: WNYKELPEFRAN*RISKTNPHTHT
Trigger: TGTGTGTGTATGAGGGTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp GTATATCATCATTATCAGCAGGAGTGTGATTGTGTCTaGGAGCCCATTTCACTAGATAGCCCAAAGTCTTCT +
Preference number: 3 (lower is better)
Translates to: VYHHYQQECDCV*EPISLDSPKSS
Trigger: AGAAGACTTTGGGCTATCTAGTGAAATGGGCTCCCAGACACAATCACACTCCTGCTGATAATGATGATATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTaGTCACTCATGTTTGTCAATTATGAGGAAATCCAG +
Preference number: 3 (lower is better)
Translates to: TTAISNSSHPKR*SLMFVNYEEIQ
Trigger: CTGGATTTCCTCATAATTGACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAACAAACTACTGCAGTTaGCTGCTTGGTCCTGAAATA +
Preference number: 3 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLTNYCS*LLGPEI
Trigger: TATTTCAGGACCAAGCAGCAAACTGCAGTAGTTTGT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGGAATTACAAGGAGTaGCCAGAATTTAGAGCTAAC +
Preference number: 3 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSWNYKE*PEFRAN
Trigger: GTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCTTCCCACTCCCTCTTaGGGCAGATGTTATTGTGAG +
Preference number: 3 (lower is better)
Translates to: GKNSDHELKSILVKELSVLPTPS*GRCYCE
Trigger: CTCACAATAACATCTGCCCAAAGAGGGAGTGGGAAG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CAA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACTTGGGAAACTTGGTTaGCTTCAACAAGTATTTACT +
Preference number: 3 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLGKLG*LQQVFT
Trigger: AGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAAG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR TCA 72 bp TTCAGAGGAGAAAGATGTCTTGGTCACTATAAGAGATaGGGACTTGGGAAACTTGGTTTGCTTCAACAAGTA +
Preference number: 3 (lower is better)
Translates to: FRGERCLGHYKR*GLGKLGLLQQV
Trigger: TACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCTCATCTCTTATAGTGACCAAGACATCTTTCTCCTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CAA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATGGAATTACAAGGAGTaGCCAGAATTTAGAGCTAAC +
Preference number: 3 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKWNYKE*PEFRAN
Trigger: GTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR-3UTR CAA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCATGTATCAAATACATaGGAATTACAAGGAGTTGCC +
Preference number: 3 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLHVSNT*ELQGVA
Trigger: GGCAACTCCTTGTAATTCCAATGTATTTGATACATG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR GCA 72 bp TTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATaGATTCAACATGATTGTTCATGTATCAAATACATT +
Preference number: 3 (lower is better)
Translates to: FPGRRGSLPDHK*IQHDCSCIKYI
Trigger: AATGTATTTGATACATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR TCA 72 bp TTATTTATTTTTACCACCTACCACAAAACACATCTTTaGGCAAGGCTAACTTCCACTTTGGGTAAAGCTCCA +
Preference number: 3 (lower is better)
Translates to: LFIFTTYHKTHL*ARLTSTLGKAP
Trigger: TGGAGCTTTACCCAAAGTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTGGTAGGTGGTAAAAATAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR GCA 72 bp AATGCTGTAAGTTACATATTAATTTATAGCCTTCTCTaGTCACTTCAACTAGAACAAGAGCCCATTTTCCCC +
Preference number: 3 (lower is better)
Translates to: NAVSYILIYSLL*SLQLEQEPIFP
Trigger: GGGGAAAATGGGCTCTTGTTCTAGTTGAAGTGAGCAGAGAAGGCTATAAATTAATATGTAACTTACAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
3UTR CCA 72 bp TCTTTACCTGAGCTTAAAACAAACATGAACAGGTTATaGCAAACTTTAAACCAAGAGCTGCTATGCCCATAT +
Preference number: 3 (lower is better)
Translates to: SLPELKTNMNRL*QTLNQELLCPY
Trigger: ATATGGGCATAGCAGCTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTTTGTTTTAAGCTCAGGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATAATCCAAATGGCACCTaGGGCGACGGGCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDNPNGT*GDGRGP
Trigger: CGGGCCCCGCCCGTCGCCTCAGGTGCCATTTGGATT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCACTATCGGGAGTCGTaGGCTCCGTGCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLHYRES*APCFHH
Trigger: GTGGTGGAAGCACGGAGCCCACGACTCCCGATAGTG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTCCACCACTGCTGGGTaGTGCCTCCAGTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLSTTAG*CLQLAT
Trigger: GGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCCTAACCGACGAAGATaGAACACAGGAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRPNRRR*NTGGKG
Trigger: CCCCTTGCCTCCTGTGTTTCATCTTCGTCGGTTAGG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCCTCACTGTCCTCAGTaGTCCCAACCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQPHCPQ*SQPEGR
Trigger: CCTCCCCTCTGGTTGGGAGCACTGAGGACAGTGAGG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGCGCTTTCACCGCCCTaGCCGGCCGTCCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLALSPP*PAVLRR
Trigger: CCGCCTGAGGACGGCCGGCCAGGGCGGTGAAAGCGC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCACTATCGGGAGTCGTaGGCTCCGTGCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLHYRES*APCFHH
Trigger: GTGGTGGAAGCACGGAGCCCACGACTCCCGATAGTG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAAATCCAAATGGCACCTaGGGCGACGGGCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLNPNGT*GDGRGP
Trigger: CGGGCCCCGCCCGTCGCCTCAGGTGCCATTTGGATT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTCGGGCCATGAGAGATaGCTCACGGGCCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLSGHER*LTGQFL
Trigger: CAGAAACTGGCCCGTGAGTCATCTCTCATGGCCCGA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAGGTGCACACAGAACTaGTGGCTCGCTTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCRCTQN*WLASGL
Trigger: GAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACCT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTGGCAGGACCACTAGGTaGAGGAAATGCGCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCGRTTR*RKCAEQ
Trigger: TTGCTCGGCGCATTTCCTTCACCTAGTGGTCCTGCC...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGGGCAGATGTTATTGTaGGCAGAAGGAACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLGQMLL*AEGTSA
Trigger: GGCGCTGGTTCCTTCTGCTCACAATAACATCTGCCC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCCACTGCTCCACCACTaGTGGGTGATGCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQPLLHH*WVMPPV
Trigger: AACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCCACTGCTCCACCACTaGTGGGTGATGCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLPLLHH*WVMPPV
Trigger: AACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGAGTCGTGGGCTCCGTaGTTCCACCACTTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQESWAP*FHHLLN
Trigger: GTTCAGCAAGTGGTGGAAGCACGGAGCCCACGACTC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTGAGTCGTGGGCTCCGTaGTTCCACCACTTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCESWAP*FHHLLN
Trigger: GTTCAGCAAGTGGTGGAAGCACGGAGCCCACGACTC...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCATGCCTTCAGGGGCTaGACATCCTTCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQHAFRG*TSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCAGGCAACTTCCGACTaGCAGGGGCGGCGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSQATSD*QGRRRQ
Trigger: TTGACGCCGCCGCCCCTGGCAGTCGGAAGTTGCCTG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGGCGCTTTCACCGCCCTaGCCGGCCGTCCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVALSPP*PAVLRR
Trigger: CCGCCTGAGGACGGCCGGCCAGGGCGGTGAAAGCGC...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGCCACCTTGAACAGTTaGTGGGGCCAGAAGTATGTC +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRATLNS*WGQKYV
Trigger: GACATACTTCTGGCCCCACCAACTGTTCAAGGTGGC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTTGACAGAGGAGAGGTaGAGGACGTCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRLTEER*RTSGAE
Trigger: TTCAGCACCAGACGTCCTCCACCTCTCCTCTGTCAA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTGGCTCCGTACACACTaGGAGTTTCATGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRWLRTH*EFHAFR
Trigger: CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGTCACGGGCCAGTTTCTaGATGGCTCTCAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQSRASF*MALRTC
Trigger: ACAGGTCCTGAGAGCCATTCAGAAACTGGCCCGTGA...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGAAGTTTCTCGGGCCATaGGAGATGACTCACGGGCCA +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQKFLGP*EMTHGP
Trigger: TGGCCCGTGAGTCATCTCTCATGGCCCGAGAAACTT...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTGGGGGAGCACTGTCTaGTCGGGGTCTAGAAATACC +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCWGSTV*SGSRNT
Trigger: GGTATTTCTAGACCCCGATCAGACAGTGCTCCCCCA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGAACAGGGCGACCCTaGGGCAGCTTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAGTGRP*GSFLIL
Trigger: CAGAATGAGGAAGCTGCCTCAGGGTCGCCCTGTTCC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTTGACAGAGGAGAGGTaGAGGACGTCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLLTEER*RTSGAE
Trigger: TTCAGCACCAGACGTCCTCCACCTCTCCTCTGTCAA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCCACCCATCTCCATCTaGCAACCAATGGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRPPISI*QPMASK
Trigger: TTTGGAAGCCATTGGTTGCCAGATGGAGATGGGTGG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTCCACCACTGCTGGGTaGTGCCTCCAGTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHSTTAG*CLQLAT
Trigger: GGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAGTCTGATTTGGACTTaGCAGAGGAGAGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLSLIWT*QRRGGG
Trigger: TCCTCCACCTCTCCTCTGTCAAGTCCAAATCAGACT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCAGTGGCCGGGGTTCTaGACTAGTCTGATTTGGACT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQQWPGF*TSLIWT
Trigger: AGTCCAAATCAGACTAGTTCAGAACCCCGGCCACTG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTAGGTGCACACAGAACTaGTGGCTCGCTTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLARCTQN*WLASGL
Trigger: GAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACCT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCAGACACAGAGACACTaGAAAGCTGCCACTATCATG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRQTQRH*KAATIM
Trigger: CATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGGCAGGACCACTAGGTaGAGGAAATGCGCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVGRTTR*RKCAEQ
Trigger: TTGCTCGGCGCATTTCCTTCACCTAGTGGTCCTGCC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCCAGCATTGCCAGGATaGCACTGTTATCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRPALPG*HCYPRQ
Trigger: TTGTCTTGGATAACAGTGTCATCCTGGCAATGCTGG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTCTGCCCACATCTACTaGCCAGCCAAGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCSAHIY*PAKGKQ
Trigger: TTGCTTTCCCTTGGCTGGTCAGTAGATGTGGGCAGA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGGGTCACTCAGAAACTaGGGCTTTCAGACAGATCTG +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLGSLRN*GFQTDL
Trigger: CAGATCTGTCTGAAAGCCTCAGTTTCTGAGTGACCC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCCTGCAGCAGGTAACTaGCATTACTGGCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLPAAGN*HYWPKV
Trigger: CACCTTTGGCCAGTAATGTCAGTTACCTGCTGCAGG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTACGGACTACAGCATTTaGCACCTCTCGTCCAACGCT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLTDYSI*HLSSNA
Trigger: AGCGTTGGACGAGAGGTGGCAAATGCTGTAGTCCGT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCCTCACTGTCCTCAGTaGTCCCAACCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSPHCPQ*SQPEGR
Trigger: CCTCCCCTCTGGTTGGGAGCACTGAGGACAGTGAGG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAAAGTACAATCCAAATaGCACCTGAGGCGACGGGCG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLKVQSK*HLRRRA
Trigger: CGCCCGTCGCCTCAGGTGCCATTTGGATTGTACTTT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTCGTCCAACGCTCTCTaGATAGCTGTGCAGCACACT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLSSNAL*IAVQHT
Trigger: AGTGTGCTGCACAGCTATCCAGAGAGCGTTGGACGA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGGGCCAGTTTCTGAATaGCTCTCAGGACCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQGPVSE*LSGPVS
Trigger: GCTTACAGGTCCTGAGAGCCATTCAGAAACTGGCCC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTGCCACCTTGAACAGTTaGTGGGGCCAGAAGTATGTC +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCATLNS*WGQKYV
Trigger: GACATACTTCTGGCCCCACCAACTGTTCAAGGTGGC...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTCTGCTCCACCACTGCTaGGTGATGCCTCCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLALLHHC*VMPPVS
Trigger: GCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAG...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCCACCCATCTCCATCTaGCAACCAATGGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLPPISI*QPMASK
Trigger: TTTGGAAGCCATTGGTTGCCAGATGGAGATGGGTGG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACACTATCGGGAGTCGTaGGCTCCGTGCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSHYRES*APCFHH
Trigger: GTGGTGGAAGCACGGAGCCCACGACTCCCGATAGTG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTATGTCTTGGCGCCACTaGGAGTTGAGTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCMSWRH*ELSLWV
Trigger: CACCCAAAGACTCAACTCCCAGTGGCGCCAAGACAT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTATGTCTTGGCGCCACTaGGAGTTGAGTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLMSWRH*ELSLWV
Trigger: CACCCAAAGACTCAACTCCCAGTGGCGCCAAGACAT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGAGTATTTCCAAAACCTaGCAGGGATCTGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSISKT*QGSVGW
Trigger: CCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTGGCTCCGTACACACTaGGAGTTTCATGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCWLRTH*EFHAFR
Trigger: CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGCGCCTGGTAAGGTATaGGTATCCCATATTCCACTG +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLAPGKV*VSHIPL
Trigger: CAGTGGAATATGGGATACCCATACCTTACCAGGCGC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTCACGGGCCAGTTTCTaGATGGCTCTCAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSRASF*MALRTC
Trigger: ACAGGTCCTGAGAGCCATTCAGAAACTGGCCCGTGA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTCGGGCCATGAGAGATaGCTCACGGGCCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHSGHER*LTGQFL
Trigger: CAGAAACTGGCCCGTGAGTCATCTCTCATGGCCCGA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTAAGTTTCTCGGGCCATaGGAGATGACTCACGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAKFLGP*EMTHGP
Trigger: TGGCCCGTGAGTCATCTCTCATGGCCCGAGAAACTT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTCAGCAATGCCACCTTaGACAGTTGGTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDSAMPP*TVGGAR
Trigger: TCTGGCCCCACCAACTGTTCAAGGTGGCATTGCTGA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATCCACCACTGCTGGGTaGTGCCTCCAGTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLSTTAG*CLQLAT
Trigger: GGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTCGCTTCCGGTCTCCTaGGTCAACCATCACTTTTAC +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCSLPVS*VNHHFY
Trigger: GTAAAAGTGATGGTTGACTCAGGAGACCGGAAGCGA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAGGTGCACACAGAACTaGTGGCTCGCTTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSRCTQN*WLASGL
Trigger: GAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACCT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATAGGTGCACACAGAACTaGTGGCTCGCTTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHRCTQN*WLASGL
Trigger: GAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACCT...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCCAGCATTGCCAGGATaGCACTGTTATCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLPALPG*HCYPRQ
Trigger: TTGTCTTGGATAACAGTGTCATCCTGGCAATGCTGG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGGGACTGAGCCTCTGTaGGGAATTAAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLGTEPL*GIKIVC
Trigger: ACAGACAATCTTAATTCCTCACAGAGGCTCAGTCCC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTGGGTCACTCAGAAACTaGGGCTTTCAGACAGATCTG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLGSLRN*GFQTDL
Trigger: CAGATCTGTCTGAAAGCCTCAGTTTCTGAGTGACCC...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGAAGAAACCCACCGTTTaGTTCCACATCGTACGGATA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRKKPTV*FHIVRI
Trigger: TATCCGTACGATGTGGAATCAAACGGTGGGTTTCTT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCCACTGCTCCACCACTaGTGGGTGATGCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSPLLHH*WVMPPV
Trigger: AACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGAGTCGTGGGCTCCGTaGTTCCACCACTTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSESWAP*FHHLLN
Trigger: GTTCAGCAAGTGGTGGAAGCACGGAGCCCACGACTC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGAAGACAAAGCTGTTGTaGCCAAGCAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRKTKLL*PSKSSR
Trigger: TCTGGAAGACTTGCTTGGGCACAACAGCTTTGTCTT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCAATCTGCTGGGCCATaGCACTCCTTAATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRQSAGP*HSLIFR
Trigger: ACGAAAAATTAAGGAGTGGCATGGCCCAGCAGATTG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCAACTGGTAGAAACATaGCCAGTCCAACCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCQLVET*PVQPGC
Trigger: ACACCCTGGTTGGACTGGGCATGTTTCTACCAGTTG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGAACTCTGGCTCCAGCTaGTTGTTCCGGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQNSGSS*LFRYLL
Trigger: CAACAAGTACCGGAACAAGCAGCTGGAGCCAGAGTT...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTCCTTCACAAACTACTaGAGTTTGCTGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSFTNY*SLLLGP
Trigger: AGGACCAAGCAGCAAACTGCAGTAGTTTGTGAAGGA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCATGCCTTCAGGGGCTaGACATCCTTCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSHAFRG*TSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACAGCCGGCTGGGATCTaGTCAGGCAACTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLQPAGI*SGNFRL
Trigger: CAGTCGGAAGTTGCCTGAGCAGATCCCAGCCGGCTG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCTGGAGGGATCAGACTaGCATCTTCATCGGGAACTT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCLEGSD*HLHREL
Trigger: AAGTTCCCGATGAAGATGCCAGTCTGATCCCTCCAG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCTGGAGGGATCAGACTaGCATCTTCATCGGGAACTT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLEGSD*HLHREL
Trigger: AAGTTCCCGATGAAGATGCCAGTCTGATCCCTCCAG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGATGCTGTTAACCTTTaGTCTCCGAGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVDAVNL*SPRGRQ
Trigger: CTGCCTGCCCCTCGGAGACCAAAGGTTAACAGCATC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTCATTTGGGTGTTGTTaGGGTCCGTTTCAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSFGCC*GPFQFA
Trigger: TGCAAACTGAAACGGACCCCAACAACACCCAAATGA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCCATCTGGCAACCAATaGCTTCCAAAAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRPSGNQ*LPKVLN
Trigger: ATTCAGCACTTTTGGAAGCCATTGGTTGCCAGATGG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTGATATGCTCATGTCTTaGCGCCACTGGGAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCDMLMS*RHWELS
Trigger: ACTCAACTCCCAGTGGCGCCAAGACATGAGCATATC...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGGAGTGCAGATCCCTaGAGTGTAAAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDWSADP*SVKELA
Trigger: GGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGTCAAAAGGACGACATaGCAAGAGATCCAGATACCC +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLVKRTT*QEIQIP
Trigger: GGGTATCTGGATCTCTTGCCATGTCGTCCTTTTGAC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCTCAAGTGTCAGGGATaGCTGTTTCAGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLLKCQG*LFQNSW
Trigger: CCAGGAATTCTGAAACAGCCATCCCTGACACTTGAG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTTTCTGATCTGTTCCTaGGTCACTCAGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRFLICS*VTQKLR
Trigger: CCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCTGGCAGGGATCTGTTaGCTGGCAAAGTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQLAGIC*LAKSRK
Trigger: TTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCTGGCAGGGATCTGTTaGCTGGCAAAGTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLAGIC*LAKSRK
Trigger: TTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAGTATTTCCAAAACCTaGCAGGGATCTGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLSISKT*QGSVGW
Trigger: CCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGCGCCTGGTAAGGTATaGGTATCCCATATTCCACTG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQAPGKV*VSHIPL
Trigger: CAGTGGAATATGGGATACCCATACCTTACCAGGCGC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTCCATGGGCTTCTTCTaGACAAAGGATCGGCATAAA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSMGFF*TKDRHK
Trigger: TTTATGCCGATCCTTTGTCCAGAAGAAGCCCATGGA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR CAA 72 bp CTAGTGAAAGAGCTAAGCGTTCTTCCCACTCCCTCTTaGGGCAGATGTTATTGTGAGCAGAAGGAACCAGCG +
Preference number: 4 (lower is better)
Translates to: LVKELSVLPTPS*GRCYCEQKEPA
Trigger: CGCTGGTTCCTTCTGCTCACAATAACATCTGCCCAAAGAGGGAGTGGGAAGAACGCTTAGCTCTTTCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAATCACCAAATGCAGTaGCCTCCACTCAGAGTACAT +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLNHQMQ*PPLRVH
Trigger: ATGTACTCTGAGTGGAGGTCACTGCATTTGGTGATT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCCACCACTGCTGGGTaGTGCCTCCAGTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSTTAG*CLQLAT
Trigger: GGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCATCCACCAGACAGCTaGTTCCACGCATGGCACGAA +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHHPPDS*FHAWHE
Trigger: TTCGTGCCATGCGTGGAATCAGCTGTCTGGTGGATG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGGTTCTGAACTAGTCTaGTTTGGACTTGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLGSELV*FGLDRG
Trigger: TCCTCTGTCAAGTCCAAATCAGACTAGTTCAGAACC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGGACCACCTCAGATTTaGCTGTGCCAAAATGATGAG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQGPPQI*LCQNDE
Trigger: CTCATCATTTTGGCACAGTCAAATCTGAGGTGGTCC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVLWVTR*MLRIRS
Trigger: GCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAG...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCCAGCATTGCCAGGATaGCACTGTTATCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCPALPG*HCYPRQ
Trigger: TTGTCTTGGATAACAGTGTCATCCTGGCAATGCTGG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGCAAATCTGGAATGCTaGGATCTGCTTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRANLEC*DLLSQK
Trigger: CTTTTGTGAAAGCAGATCTCAGCATTCCAGATTTGC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTCAAGTGCAATAAGGTaGGGAGGTAGACGACTATTT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSSAIR*GGRRLF
Trigger: AAATAGTCGTCTACCTCCTCACCTTATTGCACTTGA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTCTGCCCACATCTACTaGCCAGCCAAGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSAHIY*PAKGKQ
Trigger: TTGCTTTCCCTTGGCTGGTCAGTAGATGTGGGCAGA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGGAACAGGGCGACCCTaGGGCAGCTTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLGTGRP*GSFLIL
Trigger: CAGAATGAGGAAGCTGCCTCAGGGTCGCCCTGTTCC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTTTGCTGCTTGGTCCTaGAATAAGAGACAATGGATG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRFAAWS*NKRQWM
Trigger: CATCCATTGTCTCTTATTTCAGGACCAAGCAGCAAA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCSLGEI*ISSVER
Trigger: CCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATGGGCAGATGTTATTGTaGGCAGAAGGAACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHGQMLL*AEGTSA
Trigger: GGCGCTGGTTCCTTCTGCTCACAATAACATCTGCCC...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGGGCAGATGTTATTGTaGGCAGAAGGAACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSGQMLL*AEGTSA
Trigger: GGCGCTGGTTCCTTCTGCTCACAATAACATCTGCCC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGAAGGTAACCGTTCATaGAGGCCTCATACACAGAAC +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQEGNRS*RPHTQN
Trigger: GTTCTGTGTATGAGGCCTTCATGAACGGTTACCTTC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCCTAACCGACGAAGATaGAACACAGGAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHPNRRR*NTGGKG
Trigger: CCCCTTGCCTCCTGTGTTTCATCTTCGTCGGTTAGG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACCTAACCGACGAAGATaGAACACAGGAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSPNRRR*NTGGKG
Trigger: CCCCTTGCCTCCTGTGTTTCATCTTCGTCGGTTAGG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCTTTACCCTCATAGATaGAGGGTTTGGCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLLYPHR*RVWLLI
Trigger: GATAAGGAGCCAAACCCTGCATCTATGAGGGTAAAG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAATGCGCCGAGCAACTaGATAATGCATGTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLNAPSN*IMHVRV
Trigger: CACCCTAACATGCATTATGCAGTTGCTCGGCGCATT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAAGACAAAGCTGTTGTaGCCAAGCAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLKTKLL*PSKSSR
Trigger: TCTGGAAGACTTGCTTGGGCACAACAGCTTTGTCTT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACATGCCTTCAGGGGCTaGACATCCTTCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLHAFRG*TSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTGGGCGCCTACTATATaGAAGGCACTGTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAWAPTI*KALWNP
Trigger: GGGATTCCACAGTGCCTTGCATATAGTAGGCGCCCA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGAGCTGTGCAGCACACTaGTATGGCCTTGATCATTCT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQSCAAH*YGLDHS
Trigger: AGAATGATCAAGGCCATACCAGTGTGCTGCACAGCT...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTCGTCCAACGCTCTCTaGATAGCTGTGCAGCACACT +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSSNAL*IAVQHT
Trigger: AGTGTGCTGCACAGCTATCCAGAGAGCGTTGGACGA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCTGCTCCACCACTGCTaGGTGATGCCTCCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHLLHHC*VMPPVS
Trigger: GCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTGATGCTGTTAACCTTTaGTCTCCGAGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSDAVNL*SPRGRQ
Trigger: CTGCCTGCCCCTCGGAGACCAAAGGTTAACAGCATC...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTGCCCCTAATATCATTTaGGTGTTGTTGGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLAPNII*VLLGSV
Trigger: AACGGACCCCAACAACACCCAAATGATATTAGGGGC...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCACCTCTTCAGGAAATaGCCGATGTTTCACAGAATA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRHLFRK*PMFHRI
Trigger: TATTCTGTGAAACATCGGCCATTTCCTGAAGAGGTG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAAAAGGCGGGCTGTTTaGAATTCCTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSKRRAV*NSWAGG
Trigger: GCCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATAAAAGGCGGGCTGTTTaGAATTCCTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHKRRAV*NSWAGG
Trigger: GCCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTT...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGAGTGTGATTGTGTCTaGGAGCCCATTTCACTAGAT +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLECDCV*EPISLD
Trigger: ATCTAGTGAAATGGGCTCCCAGACACAATCACACTC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGATACAAACAAACCTCTaGACCTTCTTCCCTAACCGA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRIQTNL*TFFPNR
Trigger: TCGGTTAGGGAAGAAGGTCCAGAGGTTTGTTTGTAT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAGTCTGATTTGGACTTaGCAGAGGAGAGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSLIWT*QRRGGG
Trigger: TCCTCCACCTCTCCTCTGTCAAGTCCAAATCAGACT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATGTCTGTGGACATTTGTaGCCCTTTCCGTCGAAACTC +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDVCGHL*PFPSKL
Trigger: GAGTTTCGACGGAAAGGGTCACAAATGTCCACAGAC...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGCTTCCACCACTTGCTaGACTAATACCACTATTGGT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQASTTC*TNTTIG
Trigger: ACCAATAGTGGTATTAGTTCAGCAAGTGGTGGAAGC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHLWVTR*MLRIRS
Trigger: GCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCTTGGACTTACTTCCTaGGATACCCAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQLGLTS*DTQFHN
Trigger: ATTGTGGAACTGGGTATCTCAGGAAGTAAGTCCAAG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGGCAGGACCACTAGGTaGAGGAAATGCGCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLGRTTR*RKCAEQ
Trigger: TTGCTCGGCGCATTTCCTTCACCTAGTGGTCCTGCC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGGTACAAAAAGCTTCTaGTTTGCTTTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLGTKSF*FAFAPL
Trigger: CAGAGGAGCAAAAGCAAATCAGAAGCTTTTTGTACC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCAAAAATCCAAAGTGTaGGAGAAAAAGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCQKSKV*EKKAGC
Trigger: ACAGCCCGCCTTTTTCTCTCACACTTTGGATTTTTG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGGAACAGGGCGACCCTaGGGCAGCTTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKGTGRP*GSFLIL
Trigger: CAGAATGAGGAAGCTGCCTCAGGGTCGCCCTGTTCC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGGAACAGGGCGACCCTaGGGCAGCTTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSGTGRP*GSFLIL
Trigger: CAGAATGAGGAAGCTGCCTCAGGGTCGCCCTGTTCC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCAAGAGCTCGCCTGCTaGCAATCATCCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSQELAC*QSSHPQ
Trigger: TTGTGGATGGGATGATTGTCAGCAGGCGAGCTCTTG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAAGAACTGCAGTTCTTaGGTCCAACCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLKNCSS*VQPPGK
Trigger: TTTTCCAGGAGGTTGGACTCAAGAACTGCAGTTCTT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCCTGAGTAGAAGGCTGTaGCTTCTTTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVLSRRL*LLSFSS
Trigger: GGAGGAGAAGGAAAGAAGTCACAGCCTTCTACTCAG...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGAAGGAAAATGTGCATaGGTATGCGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQEGKCA*VCECVC
Trigger: ACACACACACTCGCATACTCATGCACATTTTCCTTC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCCTGCAGCAGGTAACTaGCATTACTGGCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHPAAGN*HYWPKV
Trigger: CACCTTTGGCCAGTAATGTCAGTTACCTGCTGCAGG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAAGAAACCCACCGTTTaGTTCCACATCGTACGGATA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLKKPTV*FHIVRI
Trigger: TATCCGTACGATGTGGAATCAAACGGTGGGTTTCTT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGGTCACTATAAGAGATaGGGACTTGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQGHYKR*GLGKLG
Trigger: ACCAAGTTTCCCAAGTCCTCATCTCTTATAGTGACC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAACGGACTACAGCATTTaGCACCTCTCGTCCAACGCT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSTDYSI*HLSSNA
Trigger: AGCGTTGGACGAGAGGTGGCAAATGCTGTAGTCCGT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTACGGACTACAGCATTTaGCACCTCTCGTCCAACGCT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSTDYSI*HLSSNA
Trigger: AGCGTTGGACGAGAGGTGGCAAATGCTGTAGTCCGT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCTAGATTCTCAGCAATaGCACCTTGAACAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCLDSQQ*HLEQLV
Trigger: CACCAACTGTTCAAGGTGGCATTGCTGAGAATCTAG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCTAGATTCTCAGCAATaGCACCTTGAACAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLDSQQ*HLEQLV
Trigger: CACCAACTGTTCAAGGTGGCATTGCTGAGAATCTAG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCCACTGCTCCACCACTaGTGGGTGATGCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLPLLHH*WVMPPV
Trigger: AACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR GCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGGGTCCGTTTCAGTTTaGAAGGCACCTATTAATATA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRGSVSV*KAPINI
Trigger: TATATTAATAGGTGCCTTGCAAACTGAAACGGACCC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGAGTCGTGGGCTCCGTaGTTCCACCACTTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLESWAP*FHHLLN
Trigger: GTTCAGCAAGTGGTGGAAGCACGGAGCCCACGACTC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGAGCTGCCAGTGATATaGTCATGTCTTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSELPVI*SCLGAT
Trigger: AGTGGCGCCAAGACATGAGCATATCACTGGCAGCTC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTCAAGCATATCAGGGTaGTCTGTCAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSSISG*SVSQTQ
Trigger: CTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTCAAGCATATCAGGGTaGTCTGTCAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDSSISG*SVSQTQ
Trigger: CTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAAGTACCGGAAACTATaGTTGTTTATGGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLKYRKL*LFMVGS
Trigger: GCTGCCAACCATAAACAAGCATAGTTTCCGGTACTT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTAACTCTGGCTCCAGCTaGTTGTTCCGGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLANSGSS*LFRYLL
Trigger: CAACAAGTACCGGAACAAGCAGCTGGAGCCAGAGTT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGGGCGCCTACTATATaGAAGGCACTGTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSWAPTI*KALWNP
Trigger: GGGATTCCACAGTGCCTTGCATATAGTAGGCGCCCA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTGCTCCACCACTGCTaGGTGATGCCTCCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLLHHC*VMPPVS
Trigger: GCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCCCACCCATCTCCATCTaGCAACCAATGGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVPPISI*QPMASK
Trigger: TTTGGAAGCCATTGGTTGCCAGATGGAGATGGGTGG...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCACTATCGGGAGTCGTaGGCTCCGTGCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVHYRES*APCFHH
Trigger: GTGGTGGAAGCACGGAGCCCACGACTCCCGATAGTG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACACTATCGGGAGTCGTaGGCTCCGTGCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSHYRES*APCFHH
Trigger: GTGGTGGAAGCACGGAGCCCACGACTCCCGATAGTG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATATGTCTTGGCGCCACTaGGAGTTGAGTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHMSWRH*ELSLWV
Trigger: CACCCAAAGACTCAACTCCCAGTGGCGCCAAGACAT...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAATGTCTTGGCGCCACTaGGAGTTGAGTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSMSWRH*ELSLWV
Trigger: CACCCAAAGACTCAACTCCCAGTGGCGCCAAGACAT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCACCTCTTCAGGAAATaGCCGATGTTTCACAGAATA +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLHLFRK*PMFHRI
Trigger: TATTCTGTGAAACATCGGCCATTTCCTGAAGAGGTG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTGAGTGTGATTGTGTCTaGGAGCCCATTTCACTAGAT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLECDCV*EPISLD
Trigger: ATCTAGTGAAATGGGCTCCCAGACACAATCACACTC...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTGTCAGTGTGACAGCTaGATGACAAGAAGACCTACA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLCQCDS*MTRRPT
Trigger: TGTAGGTCTTCTTGTCATCCAGCTGTCACACTGACA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTATTATGTCACCCCGCTaGACAATAATGGAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLIMSPR*TIMERV
Trigger: CACTCTCTCCATTATTGTCCAGCGGGGTGACATAAT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTATCCCATATTCCACTaGCTCCGTACACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAYPIFH*LRTHWE
Trigger: CTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTATCCCATATTCCACTaGCTCCGTACACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVYPIFH*LRTHWE
Trigger: CTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGCGCCTGGTAAGGTATaGGTATCCCATATTCCACTG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVAPGKV*VSHIPL
Trigger: CAGTGGAATATGGGATACCCATACCTTACCAGGCGC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCGGGCCATGAGAGATaGCTCACGGGCCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSGHER*LTGQFL
Trigger: CAGAAACTGGCCCGTGAGTCATCTCTCATGGCCCGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAAGTTTCTCGGGCCATaGGAGATGACTCACGGGCCA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLKFLGP*EMTHGP
Trigger: TGGCCCGTGAGTCATCTCTCATGGCCCGAGAAACTT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTGGGGGAGCACTGTCTaGTCGGGGTCTAGAAATACC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLWGSTV*SGSRNT
Trigger: GGTATTTCTAGACCCCGATCAGACAGTGCTCCCCCA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCTGACAGCAGCACTTTaGGGCATACTTAATCTATTC +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQLTAAL*GILNLF
Trigger: GAATAGATTAAGTATGCCTCAAAGTGCTGCTGTCAG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGTCTGTGGACATTTGTaGCCCTTTCCGTCGAAACTC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSVCGHL*PFPSKL
Trigger: GAGTTTCGACGGAAAGGGTCACAAATGTCCACAGAC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHLWVTR*MLRIRS
Trigger: GCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTCGCTTCCGGTCTCCTaGGTCAACCATCACTTTTAC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSSLPVS*VNHHFY
Trigger: GTAAAAGTGATGGTTGACTCAGGAGACCGGAAGCGA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTCGCTTCCGGTCTCCTaGGTCAACCATCACTTTTAC +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHSLPVS*VNHHFY
Trigger: GTAAAAGTGATGGTTGACTCAGGAGACCGGAAGCGA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAGGTGCACACAGAACTaGTGGCTCGCTTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVRCTQN*WLASGL
Trigger: GAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACCT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGGCAGGACCACTAGGTaGAGGAAATGCGCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSGRTTR*RKCAEQ
Trigger: TTGCTCGGCGCATTTCCTTCACCTAGTGGTCCTGCC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGGTACAAAAAGCTTCTaGTTTGCTTTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQGTKSF*FAFAPL
Trigger: CAGAGGAGCAAAAGCAAATCAGAAGCTTTTTGTACC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGTCAAGTGCAATAAGGTaGGGAGGTAGACGACTATTT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQSSAIR*GGRRLF
Trigger: AAATAGTCGTCTACCTCCTCACCTTATTGCACTTGA...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTCAAGTGCAATAAGGTaGGGAGGTAGACGACTATTT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLSSAIR*GGRRLF
Trigger: AAATAGTCGTCTACCTCCTCACCTTATTGCACTTGA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTTAAGATTGTCTGTATaGTTGGGGAAAAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRLRLSV*LGKSSS
Trigger: ACTTGAGCTTTTCCCCAATCATACAGACAATCTTAA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGGGACTGAGCCTCTGTaGGGAATTAAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVGTEPL*GIKIVC
Trigger: ACAGACAATCTTAATTCCTCACAGAGGCTCAGTCCC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAGTTGTAGATCTCAGTaGAGTGCTACTATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLSCRSQ*SATICS
Trigger: ACTGCAAATAGTAGCACTTCACTGAGATCTACAACT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTTTCCAGTGGCTCCTTaGATTTTTATCCGGAATAAT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRFPVAP*IFIRNN
Trigger: ATTATTCCGGATAAAAATTCAAGGAGCCACTGGAAA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACTGAGTAGAAGGCTGTaGCTTCTTTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSLSRRL*LLSFSS
Trigger: GGAGGAGAAGGAAAGAAGTCACAGCCTTCTACTCAG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAGTGTGACAGCTGGATaGCAAGAAGACCTACAACTG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSVTAG*QEDLQL
Trigger: CAGTTGTAGGTCTTCTTGTCATCCAGCTGTCACACT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTTTGCTGCTTGGTCCTaGAATAAGAGACAATGGATG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLFAAWS*NKRQWM
Trigger: CATCCATTGTCTCTTATTTCAGGACCAAGCAGCAAA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLEFRAN*RISKTN
Trigger: GTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTC...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGGGCAGATGTTATTGTaGGCAGAAGGAACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLGQMLL*AEGTSA
Trigger: GGCGCTGGTTCCTTCTGCTCACAATAACATCTGCCC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGACCTTCCAGAAGAAATaGATACTCTTAAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRTFQKK*ILLKTL
Trigger: CAGAGTCTTTAAGAGTATTCATTTCTTCTGGAAGGT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGTGGGCTTTAAAATGGTaGATAGAGAACTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQWALKW*IENYCQ
Trigger: CTGGCAGTAGTTCTCTATTCACCATTTTAAAGCCCA...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCTGAAGAACATGAGTTaGTATTCTGAGAAACACACT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRLKNMS*YSEKHT
Trigger: AGTGTGTTTCTCAGAATATCAACTCATGTTCTTCAG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGAGTCGTGGGCTCCGTaGTTCCACCACTTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSESWAP*FHHLLN
Trigger: GTTCAGCAAGTGGTGGAAGCACGGAGCCCACGACTC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTCATCACTTTTACCTTTaGAAGGCCAGAGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAHHFYL*KAREEL
Trigger: GAGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATG...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATGAGACACTGAAAAGCTaGCACTATCATGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDETLKS*HYHGVQ
Trigger: CTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTC...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGAGACACTGAAAAGCTaGCACTATCATGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAETLKS*HYHGVQ
Trigger: CTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGAGACACTGAAAAGCTaGCACTATCATGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVETLKS*HYHGVQ
Trigger: CTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCAAGCATATCAGGGTaGTCTGTCAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSSSISG*SVSQTQ
Trigger: CTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAATGCGCCGAGCAACTaGATAATGCATGTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVNAPSN*IMHVRV
Trigger: CACCCTAACATGCATTATGCAGTTGCTCGGCGCATT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAAGTACCGGAAACTATaGTTGTTTATGGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCKYRKL*LFMVGS
Trigger: GCTGCCAACCATAAACAAGCATAGTTTCCGGTACTT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAAGTACCGGAAACTATaGTTGTTTATGGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLKYRKL*LFMVGS
Trigger: GCTGCCAACCATAAACAAGCATAGTTTCCGGTACTT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACAACTGGTAGAAACATaGCCAGTCCAACCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSQLVET*PVQPGC
Trigger: ACACCCTGGTTGGACTGGGCATGTTTCTACCAGTTG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCAACTGGTAGAAACATaGCCAGTCCAACCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSQLVET*PVQPGC
Trigger: ACACCCTGGTTGGACTGGGCATGTTTCTACCAGTTG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCTCCCAGATCACAAATaGATTCAACATGATTGTTCA +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRLPDHK*IQHDCS
Trigger: TGAACAATCATGTTGAATGCATTTGTGATCTGGGAG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCATGCCTTCAGGGGCTaGACATCCTTCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVHAFRG*TSFLPW
Trigger: CCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAACACTGGGAGTTTCATaGCTTCAGGGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLTLGVS*LQGLHI
Trigger: GATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCCTCACTGTCCTCAGTaGTCCCAACCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVPHCPQ*SQPEGR
Trigger: CCTCCCCTCTGGTTGGGAGCACTGAGGACAGTGAGG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATACCTTGAACAGTTGGTaGGGCCAGAAGTATGTCGTT +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDTLNSW*GQKYVV
Trigger: AACGACATACTTCTGGCCCCACCAACTGTTCAAGGT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGCCACCTTGAACAGTTaGTGGGGCCAGAAGTATGTC +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHATLNS*WGQKYV
Trigger: GACATACTTCTGGCCCCACCAACTGTTCAAGGTGGC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTGCTCCACCACTGCTaGGTGATGCCTCCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGLLHHC*VMPPVS
Trigger: GCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGATGCTGTTAACCTTTaGTCTCCGAGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLDAVNL*SPRGRQ
Trigger: CTGCCTGCCCCTCGGAGACCAAAGGTTAACAGCATC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTGGAGTGCAGATCCCTaGAGTGTAAAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLWSADP*SVKELA
Trigger: GGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCATAGATGCAGGGTTTaGCTCCTTATCTCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLHRCRV*LLISFV
Trigger: TACAAAGGAGATAAGGAGCCAAACCCTGCATCTATG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGATGCTTGTTTATGGTTaGCAGCCTGGAGTATTTAAT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRMLVYG*QPGVFN
Trigger: ATTAAATACTCCAGGCTGCCAACCATAAACAAGCAT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTGTCATTTTTAGGAACTaGGCGAGGTTCAGGTACAAA +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCVIFRN*ARFRYK
Trigger: TTTGTACCTGAACCTCGCCCAGTTCCTAAAAATGAC...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTAAAAGGCGGGCTGTTTaGAATTCCTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLKRRAV*NSWAGG
Trigger: GCCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTT...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGTCAAAAGGACGACATaGCAAGAGATCCAGATACCC +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAVKRTT*QEIQIP
Trigger: GGGTATCTGGATCTCTTGCCATGTCGTCCTTTTGAC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTCTTTCAAAGGCCCAATaGATGGAAGAGGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLALSKAQ*MEEGLK
Trigger: CTTGAGACCCTCTTCCATCCATTGGGCCTTTGAAAG...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTACTGGCCAAAGGTGTaGGTACTTGTATTCATCAAT +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLYWPKV*VLVFIN
Trigger: ATTGATGAATACAAGTACCCACACCTTTGGCCAGTA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGAGGACTTGGGAAACTTaGTTTGCTTCAACAAGTATT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRRTWET*FASTSI
Trigger: AATACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTAATCACCAAATGCAGTaGCCTCCACTCAGAGTACAT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLANHQMQ*PPLRVH
Trigger: ATGTACTCTGAGTGGAGGTCACTGCATTTGGTGATT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAAGCATAGTCGAATCTaGCTGGAACCCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSKHSRI*LEPCSC
Trigger: ACAGGAACAGGGTTCCAGTCAGATTCGACTATGCTT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCAGCAATGCCACCTTaGACAGTTGGTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSAMPP*TVGGAR
Trigger: TCTGGCCCCACCAACTGTTCAAGGTGGCATTGCTGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTCAGCAATGCCACCTTaGACAGTTGGTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGSAMPP*TVGGAR
Trigger: TCTGGCCCCACCAACTGTTCAAGGTGGCATTGCTGA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCATCCACCAGACAGCTaGTTCCACGCATGGCACGAA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGHPPDS*FHAWHE
Trigger: TTCGTGCCATGCGTGGAATCAGCTGTCTGGTGGATG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACATCCACCAGACAGCTaGTTCCACGCATGGCACGAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSHPPDS*FHAWHE
Trigger: TTCGTGCCATGCGTGGAATCAGCTGTCTGGTGGATG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATGGGGGAGCACTGTCTaGTCGGGGTCTAGAAATACC +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSWGSTV*SGSRNT
Trigger: GGTATTTCTAGACCCCGATCAGACAGTGCTCCCCCA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGTTCTGAACTAGTCTaGTTTGGACTTGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAGSELV*FGLDRG
Trigger: TCCTCTGTCAAGTCCAAATCAGACTAGTTCAGAACC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCAGTGGCCGGGGTTCTaGACTAGTCTGATTTGGACT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLQWPGF*TSLIWT
Trigger: AGTCCAAATCAGACTAGTTCAGAACCCCGGCCACTG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAGTCTGTGGACATTTGTaGCCCTTTCCGTCGAAACTC +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLVCGHL*PFPSKL
Trigger: GAGTTTCGACGGAAAGGGTCACAAATGTCCACAGAC...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGGACCACCTCAGATTTaGCTGTGCCAAAATGATGAG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSGPPQI*LCQNDE
Trigger: CTCATCATTTTGGCACAGTCAAATCTGAGGTGGTCC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTGGACCACCTCAGATTTaGCTGTGCCAAAATGATGAG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSGPPQI*LCQNDE
Trigger: CTCATCATTTTGGCACAGTCAAATCTGAGGTGGTCC...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCTATTGGTGCGACTATaGCTCTTCAGGTTATTTTCT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCLLVRL*LFRLFS
Trigger: AGAAAATAACCTGAAGAGTCATAGTCGCACCAATAG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGCTTCCACCACTTGCTaGACTAATACCACTATTGGT +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVASTTC*TNTTIG
Trigger: ACCAATAGTGGTATTAGTTCAGCAAGTGGTGGAAGC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTCTCTTAAGAGAGCTTaGGCAGGTCTCTCACTATCG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHSLKRA*AGLSLS
Trigger: CGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAGA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLWVTR*MLRIRS
Trigger: GCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCAGACACAGAGACACTaGAAAGCTGCCACTATCATG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHQTQRH*KAATIM
Trigger: CATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTCAAAAATCCAAAGTGTaGGAGAAAAAGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAQKSKV*EKKAGC
Trigger: ACAGCCCGCCTTTTTCTCTCACACTTTGGATTTTTG...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCTGCCCACATCTACTaGCCAGCCAAGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSAHIY*PAKGKQ
Trigger: TTGCTTTCCCTTGGCTGGTCAGTAGATGTGGGCAGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTGGGACTGAGCCTCTGTaGGGAATTAAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSGTEPL*GIKIVC
Trigger: ACAGACAATCTTAATTCCTCACAGAGGCTCAGTCCC...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATTTCCACACCAGTACTaGTCTCTGTCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSFPHQY*SLSSAL
Trigger: CAGAGCTGATGACAGAGATCAGTACTGGTGTGGAAA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAGTTGTAGATCTCAGTaGAGTGCTACTATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCSCRSQ*SATICS
Trigger: ACTGCAAATAGTAGCACTTCACTGAGATCTACAACT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCAAGAGCTCGCCTGCTaGCAATCATCCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLQELAC*QSSHPQ
Trigger: TTGTGGATGGGATGATTGTCAGCAGGCGAGCTCTTG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAAGAACTGCAGTTCTTaGGTCCAACCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVKNCSS*VQPPGK
Trigger: TTTTCCAGGAGGTTGGACTCAAGAACTGCAGTTCTT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTAAGAACTGCAGTTCTTaGGTCCAACCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAKNCSS*VQPPGK
Trigger: TTTTCCAGGAGGTTGGACTCAAGAACTGCAGTTCTT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATAAGAACTGCAGTTCTTaGGTCCAACCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDKNCSS*VQPPGK
Trigger: TTTTCCAGGAGGTTGGACTCAAGAACTGCAGTTCTT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACTGAGTAGAAGGCTGTaGCTTCTTTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLSRRL*LLSFSS
Trigger: GGAGGAGAAGGAAAGAAGTCACAGCCTTCTACTCAG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAGTGTGACAGCTGGATaGCAAGAAGACCTACAACTG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSSVTAG*QEDLQL
Trigger: CAGTTGTAGGTCTTCTTGTCATCCAGCTGTCACACT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCATGTTTGTCAATTATaGGGAAATCCAGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLHVCQL*GNPVVL
Trigger: GAGAACTACTGGATTTCCTCATAATTGACAAACATG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGAAGGAAAATGTGCATaGGTATGCGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAEGKCA*VCECVC
Trigger: ACACACACACTCGCATACTCATGCACATTTTCCTTC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTGAAAATGGGCTGCTCTaGAATAAAGGATCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCENGLL*NKGSGN
Trigger: ATTTCCAGATCCTTTATTTCAGAGCAGCCCATTTTC...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTGAAGGTAACCGTTCATaGAGGCCTCATACACAGAAC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSEGNRS*RPHTQN
Trigger: GTTCTGTGTATGAGGCCTTCATGAACGGTTACCTTC...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCCAGGAAGAGAGAACCTaGATGGGCTTTAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVQEERT*MGFKMV
Trigger: CACCATTTTAAAGCCCATTCAGGTTCTCTCTTCCTG...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGGGGTACCTAACACCTaGCCAAGAGGACGGACTACA +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKGVPNT*PRGRTT
Trigger: TGTAGTCCGTCCTCTTGGGCAGGTGTTAGGTACCCC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGGGGTACCTAACACCTaGCCAAGAGGACGGACTACA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSGVPNT*PRGRTT
Trigger: TGTAGTCCGTCCTCTTGGGCAGGTGTTAGGTACCCC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTCAATCTGGAAGTGAGTaGACAAATGACCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAQSGSE*TNDLAP
Trigger: TGGAGCAAGGTCATTTGTGCACTCACTTCCAGATTG...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTGAGCTGCCAGTGATATaGTCATGTCTTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLELPVI*SCLGAT
Trigger: AGTGGCGCCAAGACATGAGCATATCACTGGCAGCTC...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGAGACACTGAAAAGCTaGCACTATCATGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSETLKS*HYHGVQ
Trigger: CTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATCTTTACCCTCATAGATaGAGGGTTTGGCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDLYPHR*RVWLLI
Trigger: GATAAGGAGCCAAACCCTGCATCTATGAGGGTAAAG...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAATGCGCCGAGCAACTaGATAATGCATGTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSNAPSN*IMHVRV
Trigger: CACCCTAACATGCATTATGCAGTTGCTCGGCGCATT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAAGACAAAGCTGTTGTaGCCAAGCAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVKTKLL*PSKSSR
Trigger: TCTGGAAGACTTGCTTGGGCACAACAGCTTTGTCTT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTATGTTAATTACAGTCTaGCTCACCAGAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLMLITV*LTRKPR
Trigger: TCTTGGCTTTCTGGTGAGGCAGACTGTAATTAACAT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATAACTCTGGCTCCAGCTaGTTGTTCCGGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHNSGSS*LFRYLL
Trigger: CAACAAGTACCGGAACAAGCAGCTGGAGCCAGAGTT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCATCTTTATCCTATATaGCCTCTCCCATGTTACCAT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQHLYPI*PLPCYH
Trigger: ATGGTAACATGGGAGAGGGCATATAGGATAAAGATG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTACACTGGGAGTTTCATaGCTTCAGGGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLTLGVS*LQGLHI
Trigger: GATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGT...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTACACTGGGAGTTTCATaGCTTCAGGGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLTLGVS*LQGLHI
Trigger: GATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTATAGTCGAATCTGACTaGAACCCTGTTCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAIVESD*NPVPVL
Trigger: CAAGACAGGAACAGGGTTCCAGTCAGATTCGACTAT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCATAGTCGAATCTGACTaGAACCCTGTTCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVIVESD*NPVPVL
Trigger: CAAGACAGGAACAGGGTTCCAGTCAGATTCGACTAT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGATGCTGTTAACCTTTaGTCTCCGAGGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKDAVNL*SPRGRQ
Trigger: CTGCCTGCCCCTCGGAGACCAAAGGTTAACAGCATC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGATATGCTCATGTCTTaGCGCCACTGGGAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHDMLMS*RHWELS
Trigger: ACTCAACTCCCAGTGGCGCCAAGACATGAGCATATC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTGGAGTGCAGATCCCTaGAGTGTAAAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVWSADP*SVKELA
Trigger: GGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTGGAGTGCAGATCCCTaGAGTGTAAAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGWSADP*SVKELA
Trigger: GGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGATGCTTGTTTATGGTTaGCAGCCTGGAGTATTTAAT +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLMLVYG*QPGVFN
Trigger: ATTAAATACTCCAGGCTGCCAACCATAAACAAGCAT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTATTTCATGCAAATCTaGAATGCTGAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRYFMQI*NAEICF
Trigger: AAAGCAGATCTCAGCATTCCAGATTTGCATGAAATA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAAAAGGCGGGCTGTTTaGAATTCCTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVKRRAV*NSWAGG
Trigger: GCCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACTCAAGTGTCAGGGATaGCTGTTTCAGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSLKCQG*LFQNSW
Trigger: CCAGGAATTCTGAAACAGCCATCCCTGACACTTGAG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGAGTGTGATTGTGTCTaGGAGCCCATTTCACTAGAT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAECDCV*EPISLD
Trigger: ATCTAGTGAAATGGGCTCCCAGACACAATCACACTC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCATTATGTCACCCCGCTaGACAATAATGGAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVIMSPR*TIMERV
Trigger: CACTCTCTCCATTATTGTCCAGCGGGGTGACATAAT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAATCCTTGGATGTTCTaGGTCTGGCCACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSNPWMF*VWPPQK
Trigger: CTTTTGAGGTGGCCAGACCCAGAACATCCAAGGATT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATAATCCTTGGATGTTCTaGGTCTGGCCACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHNPWMF*VWPPQK
Trigger: CTTTTGAGGTGGCCAGACCCAGAACATCCAAGGATT...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATATCCCATATTCCACTaGCTCCGTACACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLYPIFH*LRTHWE
Trigger: CTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACTTTCAAAGGCCCAATaGATGGAAGAGGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSLSKAQ*MEEGLK
Trigger: CTTGAGACCCTCTTCCATCCATTGGGCCTTTGAAAG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTCCATGGGCTTCTTCTaGACAAAGGATCGGCATAAA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSMGFF*TKDRHK
Trigger: TTTATGCCGATCCTTTGTCCAGAAGAAGCCCATGGA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTCCATGGGCTTCTTCTaGACAAAGGATCGGCATAAA +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDSMGFF*TKDRHK
Trigger: TTTATGCCGATCCTTTGTCCAGAAGAAGCCCATGGA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGACATTCAATATTCCATaGGCTTCTTCTGGACAAAGG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQTFNIP*ASSGQR
Trigger: CCTTTGTCCAGAAGAAGCCCATGGAATATTGAATGT...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAAAGTACAATCCAAATaGCACCCGTCAGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSKVQSK*HPSATL
Trigger: GAGAGTCGCTGACGGGTGCCATTTGGATTGTACTTT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397040.5
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACGGGCCAGTTTCTaGATGGCTCTCAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNSRASF*MALRTC
Trigger: ACAGGTCCTGAGAGCCATTCAGAAACTGGCCCGTGA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTTAAGGCAGGGATACTaGTTCAATTCTTGCGGCATT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLALRQGY*FNSCGI
Trigger: AATGCCGCAAGAATTGAATCAGTATCCCTGCCTTAA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTTGGGGGAGCACTGTCTaGTCGGGGTCTAGAAATACC +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVWGSTV*SGSRNT
Trigger: GGTATTTCTAGACCCCGATCAGACAGTGCTCCCCCA...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCAGTGGCCGGGGTTCTaGACTAGTCTGATTTGGACT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVQWPGF*TSLIWT
Trigger: AGTCCAAATCAGACTAGTTCAGAACCCCGGCCACTG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATTCTCTTAAGAGAGCTTaGGCAGGTCTCTCACTATCG +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHSLKRA*AGLSLS
Trigger: CGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAGA...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCCAGCATTGCCAGGATaGCACTGTTATCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHPALPG*HCYPRQ
Trigger: TTGTCTTGGATAACAGTGTCATCCTGGCAATGCTGG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGCAAATCTGGAATGCTaGGATCTGCTTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAANLEC*DLLSQK
Trigger: CTTTTGTGAAAGCAGATCTCAGCATTCCAGATTTGC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGCAAATCTGGAATGCTaGGATCTGCTTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVANLEC*DLLSQK
Trigger: CTTTTGTGAAAGCAGATCTCAGCATTCCAGATTTGC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCAAAAATCCAAAGTGTaGGAGAAAAAGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSQKSKV*EKKAGC
Trigger: ACAGCCCGCCTTTTTCTCTCACACTTTGGATTTTTG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATCTGCCCACATCTACTaGCCAGCCAAGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSSAHIY*PAKGKQ
Trigger: TTGCTTTCCCTTGGCTGGTCAGTAGATGTGGGCAGA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACAAGAGCTCGCCTGCTaGCAATCATCCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKQELAC*QSSHPQ
Trigger: TTGTGGATGGGATGATTGTCAGCAGGCGAGCTCTTG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCAAGAGCTCGCCTGCTaGCAATCATCCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVQELAC*QSSHPQ
Trigger: TTGTGGATGGGATGATTGTCAGCAGGCGAGCTCTTG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAAAGTCCAGAAAACATaGCAACAGCCATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCKVQKT*QQPFLT
Trigger: TGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTTAAAACAGACCATCTaGCTCCAATGTCATTTCATG +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLKQTI*LQCHFM
Trigger: CATGAAATGACATTGGAGTCAGATGGTCTGTTTTAA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAAGAAACCCACCGTTTaGTTCCACATCGTACGGATA +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSKKPTV*FHIVRI
Trigger: TATCCGTACGATGTGGAATCAAACGGTGGGTTTCTT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCTGAAGAACATGAGTTaGTATTCTGAGAAACACACT +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQLKNMS*YSEKHT
Trigger: AGTGTGTTTCTCAGAATATCAACTCATGTTCTTCAG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGGTCACTATAAGAGATaGGGACTTGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSGHYKR*GLGKLG
Trigger: ACCAAGTTTCCCAAGTCCTCATCTCTTATAGTGACC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGAGCTGCCAGTGATATaGTCATGTCTTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKELPVI*SCLGAT
Trigger: AGTGGCGCCAAGACATGAGCATATCACTGGCAGCTC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGAGCTGCCAGTGATATaGTCATGTCTTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSELPVI*SCLGAT
Trigger: AGTGGCGCCAAGACATGAGCATATCACTGGCAGCTC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAGCCACTATCATGGAGTaGAGATCCCTGGAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLATIME*RSLECK
Trigger: TTTACACTCCAGGGATCTGCACTCCATGATAGTGGC...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCAAGCATATCAGGGTaGTCTGTCAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSSISG*SVSQTQ
Trigger: CTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCTTTACCCTCATAGATaGAGGGTTTGGCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSLYPHR*RVWLLI
Trigger: GATAAGGAGCCAAACCCTGCATCTATGAGGGTAAAG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCAATCTGCTGGGCCATaGCACTCCTTAATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSQSAGP*HSLIFR
Trigger: ACGAAAAATTAAGGAGTGGCATGGCCCAGCAGATTG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCCCACAAACTTTATTTaGATCCCCATTAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLPTNFI*IPIKGQ
Trigger: TTGTCCTTTAATGGGGATGCAAATAAAGTTTGTGGG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTCCTTCACAAACTACTaGAGTTTGCTGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSSFTNY*SLLLGP
Trigger: AGGACCAAGCAGCAAACTGCAGTAGTTTGTGAAGGA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCTCCCAGATCACAAATaGATTCAACATGATTGTTCA +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLPDHK*IQHDCS
Trigger: TGAACAATCATGTTGAATGCATTTGTGATCTGGGAG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTTGGGAAACTTGGTTTaGTTCAACAAGTATTTACTG +
Preference number: 4 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLLGNLV*FNKYLL
Trigger: CAGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGAAAGTACAATCCAAATaGCACCTGAGGCGACGGGCG +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGKVQSK*HLRRRA
Trigger: CGCCCGTCGCCTCAGGTGCCATTTGGATTGTACTTT...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGGGCCAGTTTCTGAATaGCTCTCAGGACCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSGPVSE*LSGPVS
Trigger: GCTTACAGGTCCTGAGAGCCATTCAGAAACTGGCCC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCCAATAAGGAGGTGTTaGGAAGCACCGAGTACAAGC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLPIRRC*EAPSTS
Trigger: GCTTGTACTCGGTGCTTCCCAACACCTCCTTATTGG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACTCATTATCCATTTCTaGAGGGATCAGACTGGCATC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSLIIHF*RDQTGI
Trigger: GATGCCAGTCTGATCCCTCCAGAAATGGATAATGAG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATTGACAGAGGAGAGGTaGAGGACGTCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSLTEER*RTSGAE
Trigger: TTCAGCACCAGACGTCCTCCACCTCTCCTCTGTCAA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTCATTTGGGTGTTGTTaGGGTCCGTTTCAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHSFGCC*GPFQFA
Trigger: TGCAAACTGAAACGGACCCCAACAACACCCAAATGA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCCATCTGGCAACCAATaGCTTCCAAAAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSPSGNQ*LPKVLN
Trigger: ATTCAGCACTTTTGGAAGCCATTGGTTGCCAGATGG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCCACCCATCTCCATCTaGCAACCAATGGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLPPISI*QPMASK
Trigger: TTTGGAAGCCATTGGTTGCCAGATGGAGATGGGTGG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGATATGCTCATGTCTTaGCGCCACTGGGAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLDMLMS*RHWELS
Trigger: ACTCAACTCCCAGTGGCGCCAAGACATGAGCATATC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTAAGCTGCCACTATCATaGAGTGCAGATCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLKLPLS*SADPWS
Trigger: ACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTT...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGTCATTTTTAGGAACTaGGCGAGGTTCAGGTACAAA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVVIFRN*ARFRYK
Trigger: TTTGTACCTGAACCTCGCCCAGTTCCTAAAAATGAC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAAAAGGCGGGCTGTTTaGAATTCCTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNKRRAV*NSWAGG
Trigger: GCCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGTCAAAAGGACGACATaGCAAGAGATCCAGATACCC +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHVKRTT*QEIQIP
Trigger: GGGTATCTGGATCTCTTGCCATGTCGTCCTTTTGAC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGTTTGAATCACTATCTTaGTCCGAGATGTTACTTTCC +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQFESLS*SEMLLS
Trigger: GGAAAGTAACATCTCGGACCAAGATAGTGATTCAAA...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACTCAAGTGTCAGGGATaGCTGTTTCAGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLKCQG*LFQNSW
Trigger: CCAGGAATTCTGAAACAGCCATCCCTGACACTTGAG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGAGTGTGATTGTGTCTaGGAGCCCATTTCACTAGAT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSECDCV*EPISLD
Trigger: ATCTAGTGAAATGGGCTCCCAGACACAATCACACTC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTTTCTGATCTGTTCCTaGGTCACTCAGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSFLICS*VTQKLR
Trigger: CCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAATTATGTCACCCCGCTaGACAATAATGGAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSIMSPR*TIMERV
Trigger: CACTCTCTCCATTATTGTCCAGCGGGGTGACATAAT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCTGGCAGGGATCTGTTaGCTGGCAAAGTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLLAGIC*LAKSRK
Trigger: TTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTGGCAGGGATCTGTTaGCTGGCAAAGTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLAGIC*LAKSRK
Trigger: TTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAAGTATTTCCAAAACCTaGCAGGGATCTGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLSISKT*QGSVGW
Trigger: CCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTGGATGTTCTGGGTCTaGCCACCTCAAAAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAWMFWV*PPQKFY
Trigger: ATAAAACTTTTGAGGTGGCCAGACCCAGAACATCCA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATGGCTCCGTACACACTaGGAGTTTCATGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKWLRTH*EFHAFR
Trigger: CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTGAAAAGAGGCTGTCATaGAAATCTTTAAAACAGACC +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLEKRLS*KSLKQT
Trigger: GGTCTGTTTTAAAGATTTCCATGACAGCCTCTTTTC...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTGAAAAGAGGCTGTCATaGAAATCTTTAAAACAGACC +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCEKRLS*KSLKQT
Trigger: GGTCTGTTTTAAAGATTTCCATGACAGCCTCTTTTC...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTATATGCAAGGCACTGTaGAATCCCAAATTATACCTT +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCICKAL*NPKLYL
Trigger: AAGGTATAATTTGGGATTCCACAGTGCCTTGCATAT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAGGACTTGGGAAACTTaGTTTGCTTCAACAAGTATT +
Preference number: 4 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLRTWET*FASTSI
Trigger: AATACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
3UTR CAA 72 bp CAGGTAACTGACATTACTGGCCAAAGGTGTGGGTACTaGTATTCATCAATGAATCCAGAGGAAAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVTDITGQRCGY*YSSMNPEENGL
Trigger: CAGCCCATTTTCCTCTGGATTCATTGATGAATACAAGTACCCACACCTTTGGCCAGTAATGTCAGTTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCTGACAGCAGCACTTTaGGGCATACTTAATCTATTC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSLTAAL*GILNLF
Trigger: GAATAGATTAAGTATGCCTCAAAGTGCTGCTGTCAG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAGTCTGATTTGGACTTaGCAGAGGAGAGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSLIWT*QRRGGG
Trigger: TCCTCCACCTCTCCTCTGTCAAGTCCAAATCAGACT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAGTCTGATTTGGACTTaGCAGAGGAGAGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSSLIWT*QRRGGG
Trigger: TCCTCCACCTCTCCTCTGTCAAGTCCAAATCAGACT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTCTATTGGTGCGACTATaGCTCTTCAGGTTATTTTCT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLALLVRL*LFRLFS
Trigger: AGAAAATAACCTGAAGAGTCATAGTCGCACCAATAG...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCTCTTAAGAGAGCTTaGGCAGGTCTCTCACTATCG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSLKRA*AGLSLS
Trigger: CGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLWVTR*MLRIRS
Trigger: GCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCGCTTCCGGTCTCCTaGGTCAACCATCACTTTTAC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSLPVS*VNHHFY
Trigger: GTAAAAGTGATGGTTGACTCAGGAGACCGGAAGCGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACTTGGACTTACTTCCTaGGATACCCAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLGLTS*DTQFHN
Trigger: ATTGTGGAACTGGGTATCTCAGGAAGTAAGTCCAAG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCTTGGACTTACTTCCTaGGATACCCAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHLGLTS*DTQFHN
Trigger: ATTGTGGAACTGGGTATCTCAGGAAGTAAGTCCAAG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCCAGCATTGCCAGGATaGCACTGTTATCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLPALPG*HCYPRQ
Trigger: TTGTCTTGGATAACAGTGTCATCCTGGCAATGCTGG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGAAATCACTTCTTGTTaGGATCCTTCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAEITSC*DPSPSS
Trigger: TGATGATGGTGAAGGATCTCAACAAGAAGTGATTTC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397040.5
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTTTCCACACCAGTACTaGTCTCTGTCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLFPHQY*SLSSAL
Trigger: CAGAGCTGATGACAGAGATCAGTACTGGTGTGGAAA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTTTCCACACCAGTACTaGTCTCTGTCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLFPHQY*SLSSAL
Trigger: CAGAGCTGATGACAGAGATCAGTACTGGTGTGGAAA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAGTTGTAGATCTCAGTaGAGTGCTACTATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVSCRSQ*SATICS
Trigger: ACTGCAAATAGTAGCACTTCACTGAGATCTACAACT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCAAGAGCTCGCCTGCTaGCAATCATCCCATCCACAA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNQELAC*QSSHPQ
Trigger: TTGTGGATGGGATGATTGTCAGCAGGCGAGCTCTTG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACTGAGTAGAAGGCTGTaGCTTCTTTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSLSRRL*LLSFSS
Trigger: GGAGGAGAAGGAAAGAAGTCACAGCCTTCTACTCAG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTAGTGTGACAGCTGGATaGCAAGAAGACCTACAACTG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLSVTAG*QEDLQL
Trigger: CAGTTGTAGGTCTTCTTGTCATCCAGCTGTCACACT...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATTCTTTTTGTCAGTGTaGCAGCTGGATGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSFFLSV*QLDDKK
Trigger: CTTCTTGTCATCCAGCTGTCACACTGACAAAAAGAA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTTCTTTTTGTCAGTGTaGCAGCTGGATGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHFFLSV*QLDDKK
Trigger: CTTCTTGTCATCCAGCTGTCACACTGACAAAAAGAA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLSLGEI*ISSVER
Trigger: CCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSLGEI*ISSVER
Trigger: CCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSEFRAN*RISKTN
Trigger: GTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTC...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSEFRAN*RISKTN
Trigger: GTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCCTGCAGCAGGTAACTaGCATTACTGGCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNPAAGN*HYWPKV
Trigger: CACCTTTGGCCAGTAATGTCAGTTACCTGCTGCAGG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATATCACTTCTTCTTGTTaGGATCCTTCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDITSSC*DPSPSS
Trigger: TGATGATGGTGAAGGATCTCAACAAGAAGAAGTGAT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGAGTATGTCGTTAATCTaGAGAAGAAACAACAGTAAG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQSMSLI*RRNNSK
Trigger: CTTACTGTTGTTTCTTCTGCAGATTAACGACATACT...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCAATCTGGAAGTGAGTaGACAAATGACCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHQSGSE*TNDLAP
Trigger: TGGAGCAAGGTCATTTGTGCACTCACTTCCAGATTG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATGGGTCCGTTTCAGTTTaGAAGGCACCTATTAATATA +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDGSVSV*KAPINI
Trigger: TATATTAATAGGTGCCTTGCAAACTGAAACGGACCC...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGAGCTGCCAGTGATATaGTCATGTCTTGGCGCCACT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNELPVI*SCLGAT
Trigger: AGTGGCGCCAAGACATGAGCATATCACTGGCAGCTC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCATCACTTTTACCTTTaGAAGGCCAGAGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLHHFYL*KAREEL
Trigger: GAGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGCCACTATCATGGAGTaGAGATCCCTGGAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLATIME*RSLECK
Trigger: TTTACACTCCAGGGATCTGCACTCCATGATAGTGGC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATCAAGCATATCAGGGTaGTCTGTCAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKSSISG*SVSQTQ
Trigger: CTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAATGCGCCGAGCAACTaGATAATGCATGTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLNAPSN*IMHVRV
Trigger: CACCCTAACATGCATTATGCAGTTGCTCGGCGCATT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCATGTTAATTACAGTCTaGCTCACCAGAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVMLITV*LTRKPR
Trigger: TCTTGGCTTTCTGGTGAGGCAGACTGTAATTAACAT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTATGTTAATTACAGTCTaGCTCACCAGAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAMLITV*LTRKPR
Trigger: TCTTGGCTTTCTGGTGAGGCAGACTGTAATTAACAT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAAACTCTGGCTCCAGCTaGTTGTTCCGGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKNSGSS*LFRYLL
Trigger: CAACAAGTACCGGAACAAGCAGCTGGAGCCAGAGTT...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAACTCTGGCTCCAGCTaGTTGTTCCGGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSNSGSS*LFRYLL
Trigger: CAACAAGTACCGGAACAAGCAGCTGGAGCCAGAGTT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATACACTGGGAGTTTCATaGCTTCAGGGGCTGCACATC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNTLGVS*LQGLHI
Trigger: GATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTGGGCGCCTACTATATaGAAGGCACTGTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNWAPTI*KALWNP
Trigger: GGGATTCCACAGTGCCTTGCATATAGTAGGCGCCCA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCGTCCAACGCTCTCTaGATAGCTGTGCAGCACACT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNSSNAL*IAVQHT
Trigger: AGTGTGCTGCACAGCTATCCAGAGAGCGTTGGACGA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATATAGTCGAATCTGACTaGAACCCTGTTCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHIVESD*NPVPVL
Trigger: CAAGACAGGAACAGGGTTCCAGTCAGATTCGACTAT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTGGGCCAGTTTCTGAATaGCTCTCAGGACCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVGPVSE*LSGPVS
Trigger: GCTTACAGGTCCTGAGAGCCATTCAGAAACTGGCCC...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTACCTTGAACAGTTGGTaGGGCCAGAAGTATGTCGTT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLTLNSW*GQKYVV
Trigger: AACGACATACTTCTGGCCCCACCAACTGTTCAAGGT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGCCACCTTGAACAGTTaGTGGGGCCAGAAGTATGTC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNATLNS*WGQKYV
Trigger: GACATACTTCTGGCCCCACCAACTGTTCAAGGTGGC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCCAATAAGGAGGTGTTaGGAAGCACCGAGTACAAGC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVPIRRC*EAPSTS
Trigger: GCTTGTACTCGGTGCTTCCCAACACCTCCTTATTGG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCCAATAAGGAGGTGTTaGGAAGCACCGAGTACAAGC +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGPIRRC*EAPSTS
Trigger: GCTTGTACTCGGTGCTTCCCAACACCTCCTTATTGG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACCAATAAGGAGGTGTTaGGAAGCACCGAGTACAAGC +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSPIRRC*EAPSTS
Trigger: GCTTGTACTCGGTGCTTCCCAACACCTCCTTATTGG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACTGGAGGGATCAGACTaGCATCTTCATCGGGAACTT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSLEGSD*HLHREL
Trigger: AAGTTCCCGATGAAGATGCCAGTCTGATCCCTCCAG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTGGAGGGATCAGACTaGCATCTTCATCGGGAACTT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLEGSD*HLHREL
Trigger: AAGTTCCCGATGAAGATGCCAGTCTGATCCCTCCAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTAGAGCTTATAATAGCTaGGTTACTCAAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLARAYNS*VTQIHR
Trigger: CCTGTGGATTTGAGTAACCCAGCTATTATAAGCTCT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTGACAGAGGAGAGGTaGAGGACGTCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLTEER*RTSGAE
Trigger: TTCAGCACCAGACGTCCTCCACCTCTCCTCTGTCAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCCACCCATCTCCATCTaGCAACCAATGGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVPPISI*QPMASK
Trigger: TTTGGAAGCCATTGGTTGCCAGATGGAGATGGGTGG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATATGTCTTGGCGCCACTaGGAGTTGAGTCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNMSWRH*ELSLWV
Trigger: CACCCAAAGACTCAACTCCCAGTGGCGCCAAGACAT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGATATGCTCATGTCTTaGCGCCACTGGGAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKDMLMS*RHWELS
Trigger: ACTCAACTCCCAGTGGCGCCAAGACATGAGCATATC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAAAGCTGCCACTATCATaGAGTGCAGATCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKKLPLS*SADPWS
Trigger: ACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTT...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATCTTGCTCATTGTTCTTaGACTTACTTCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDLAHCS*TYFLRY
Trigger: GTATCTCAGGAAGTAAGTCCAAGAACAATGAGCAAG...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCATAGATGCAGGGTTTaGCTCCTTATCTCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSHRCRV*LLISFV
Trigger: TACAAAGGAGATAAGGAGCCAAACCCTGCATCTATG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCATAGATGCAGGGTTTaGCTCCTTATCTCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHHRCRV*LLISFV
Trigger: TACAAAGGAGATAAGGAGCCAAACCCTGCATCTATG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCAACTATGCTTGTTTATaGTTGGCAGCCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVNYACL*LAAWSI
Trigger: AATACTCCAGGCTGCCAACCATAAACAAGCATAGTT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATAACTATGCTTGTTTATaGTTGGCAGCCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDNYACL*LAAWSI
Trigger: AATACTCCAGGCTGCCAACCATAAACAAGCATAGTT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTTGCTTTTGCTCCTCTaGGTAAAAGACAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVLLLLL*VKDKAV
Trigger: AACAGCTTTGTCTTTTACCCAGAGGAGCAAAAGCAA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCTTGCAATCCGTAACTaGGTCAGGAAAACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHLAIRN*VRKTSL
Trigger: AAGAGAAGTTTTCCTGACCCAGTTACGGATTGCAAG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACTTGCAATCCGTAACTaGGTCAGGAAAACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSLAIRN*VRKTSL
Trigger: AAGAGAAGTTTTCCTGACCCAGTTACGGATTGCAAG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGTCAAAAGGACGACATaGCAAGAGATCCAGATACCC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLVKRTT*QEIQIP
Trigger: GGGTATCTGGATCTCTTGCCATGTCGTCCTTTTGAC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTCAAGTGTCAGGGATaGCTGTTTCAGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLKCQG*LFQNSW
Trigger: CCAGGAATTCTGAAACAGCCATCCCTGACACTTGAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTAGTATTTCCAAAACCTaGCAGGGATCTGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLSISKT*QGSVGW
Trigger: CCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACT...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGGATGTTCTGGGTCTaGCCACCTCAAAAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSWMFWV*PPQKFY
Trigger: ATAAAACTTTTGAGGTGGCCAGACCCAGAACATCCA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAATCCTTGGATGTTCTaGGTCTGGCCACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLNPWMF*VWPPQK
Trigger: CTTTTGAGGTGGCCAGACCCAGAACATCCAAGGATT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGAACATGAACAGGTTATaGCAAACTTTAAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: HPPPAYPTDIATELFKPQNMNRL*QTLNQE
Trigger: CTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTT...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAACATGAACAGGTTATaGCAAACTTTAAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCNMNRL*QTLNQE
Trigger: CTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATATCCCATATTCCACTaGCTCCGTACACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKYPIFH*LRTHWE
Trigger: CTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTACTGGCCAAAGGTGTaGGTACTTGTATTCATCAAT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAYWPKV*VLVFIN
Trigger: ATTGATGAATACAAGTACCCACACCTTTGGCCAGTA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTATACAAACAAACCTCTaGACCTTCTTCCCTAACCGA +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSIQTNL*TFFPNR
Trigger: TCGGTTAGGGAAGAAGGTCCAGAGGTTTGTTTGTAT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCACATTCAATATTCCATaGGCTTCTTCTGGACAAAGG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVTFNIP*ASSGQR
Trigger: CCTTTGTCCAGAAGAAGCCCATGGAATATTGAATGT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAAGCATAGTCGAATCTaGCTGGAACCCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVKHSRI*LEPCSC
Trigger: ACAGGAACAGGGTTCCAGTCAGATTCGACTATGCTT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTTTAAATGCAGGAAATaGAGGACCATATGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVFKCRK*RTICKA
Trigger: CGCTTTACATATGGTCCTTCATTTCCTGCATTTAAA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGTCTGTGGACATTTGTaGCCCTTTCCGTCGAAACTC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNVCGHL*PFPSKL
Trigger: GAGTTTCGACGGAAAGGGTCACAAATGTCCACAGAC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGGACCACCTCAGATTTaGCTGTGCCAAAATGATGAG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSGPPQI*LCQNDE
Trigger: CTCATCATTTTGGCACAGTCAAATCTGAGGTGGTCC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTGCTTCCACCACTTGCTaGACTAATACCACTATTGGT +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLASTTC*TNTTIG
Trigger: ACCAATAGTGGTATTAGTTCAGCAAGTGGTGGAAGC...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATCTCTTAAGAGAGCTTaGGCAGGTCTCTCACTATCG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKSLKRA*AGLSLS
Trigger: CGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAGA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACAGACACAGAGACACTaGAAAGCTGCCACTATCATG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKQTQRH*KAATIM
Trigger: CATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGCAAATCTGGAATGCTaGGATCTGCTTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHANLEC*DLLSQK
Trigger: CTTTTGTGAAAGCAGATCTCAGCATTCCAGATTTGC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGGGACTGAGCCTCTGTaGGGAATTAAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSGTEPL*GIKIVC
Trigger: ACAGACAATCTTAATTCCTCACAGAGGCTCAGTCCC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATTTCCACACCAGTACTaGTCTCTGTCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSFPHQY*SLSSAL
Trigger: CAGAGCTGATGACAGAGATCAGTACTGGTGTGGAAA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTTTCCACACCAGTACTaGTCTCTGTCATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGFPHQY*SLSSAL
Trigger: CAGAGCTGATGACAGAGATCAGTACTGGTGTGGAAA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTTTCCAGTGGCTCCTTaGATTTTTATCCGGAATAAT +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDFPVAP*IFIRNN
Trigger: ATTATTCCGGATAAAAATTCAAGGAGCCACTGGAAA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTTTCCAGTGGCTCCTTaGATTTTTATCCGGAATAAT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAFPVAP*IFIRNN
Trigger: ATTATTCCGGATAAAAATTCAAGGAGCCACTGGAAA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTCCATGCTATCAACATaGGTCTTTAAATGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLASMLST*VFKCPV
Trigger: TACAGGACATTTAAAGACTCATGTTGATAGCATGGA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATTTGCTGCTTGGTCCTaGAATAAGAGACAATGGATG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLFAAWS*NKRQWM
Trigger: CATCCATTGTCTCTTATTTCAGGACCAAGCAGCAAA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCTCTGGGAGAGATCTaGATTAGTAGCGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSLGEI*ISSVER
Trigger: CCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTCTGAAGAATCACACTaGAGAAGTACATCTGCATCA +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSSEESH*RSTSAS
Trigger: TGATGCAGATGTACTTCTTCAGTGTGATTCTTCAGA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGAAAATGGGCTGCTCTaGAATAAAGGATCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSENGLL*NKGSGN
Trigger: ATTTCCAGATCCTTTATTTCAGAGCAGCCCATTTTC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATACCTTCCAGAAGAAATaGATACTCTTAAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDTFQKK*ILLKTL
Trigger: CAGAGTCTTTAAGAGTATTCATTTCTTCTGGAAGGT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATGGGCTTTAAAATGGTaGATAGAGAACTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLWALKW*IENYCQ
Trigger: CTGGCAGTAGTTCTCTATTCACCATTTTAAAGCCCA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCTAGATTCTCAGCAATaGCACCTTGAACAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLLDSQQ*HLEQLV
Trigger: CACCAACTGTTCAAGGTGGCATTGCTGAGAATCTAG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAAGCCTCAGCTCTTCCTaGTTCATAGTTATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLSLSSS*FIVIRK
Trigger: TTTCCTGATAACTATGAAGCAGGAAGAGCTGAGGCT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATGGGTCCGTTTCAGTTTaGAAGGCACCTATTAATATA +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHGSVSV*KAPINI
Trigger: TATATTAATAGGTGCCTTGCAAACTGAAACGGACCC...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCATCACTTTTACCTTTaGAAGGCCAGAGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVHHFYL*KAREEL
Trigger: GAGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGGCCACTATCATGGAGTaGAGATCCCTGGAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGATIME*RSLECK
Trigger: TTTACACTCCAGGGATCTGCACTCCATGATAGTGGC...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTTTACCCTCATAGATaGAGGGTTTGGCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLYPHR*RVWLLI
Trigger: GATAAGGAGCCAAACCCTGCATCTATGAGGGTAAAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCAACTGGTAGAAACATaGCCAGTCCAACCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNQLVET*PVQPGC
Trigger: ACACCCTGGTTGGACTGGGCATGTTTCTACCAGTTG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCCCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTAACCAAGAGCTGCTATaGCCATATTTCTTGCTTATA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLANQELL*PYFLLI
Trigger: TATAAGCAAGAAATATGGGCATAGCAGCTCTTGGTT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGAATTACAAGGAGTTaGCAGAATTTAGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAGITRS*QNLELT
Trigger: AGTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCC...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTGCAGAGTCTGACAAATaGTTCCCTAGTGTATGGAGA +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLAESDK*FPSVWR
Trigger: TCTCCATACACTAGGGAAGCATTTGTCAGACTCTGC...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTCATTATCCATTTCTaGAGGGATCAGACTGGCATC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLIIHF*RDQTGI
Trigger: GATGCCAGTCTGATCCCTCCAGAAATGGATAATGAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGCCCCTAATATCATTTaGGTGTTGTTGGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSAPNII*VLLGSV
Trigger: AACGGACCCCAACAACACCCAAATGATATTAGGGGC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGCCCCTAATATCATTTaGGTGTTGTTGGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKAPNII*VLLGSV
Trigger: AACGGACCCCAACAACACCCAAATGATATTAGGGGC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTAAGCTGCCACTATCATaGAGTGCAGATCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVKLPLS*SADPWS
Trigger: ACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAAGCTGCCACTATCATaGAGTGCAGATCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNKLPLS*SADPWS
Trigger: ACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCTTGCTCATTGTTCTTaGACTTACTTCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSLAHCS*TYFLRY
Trigger: GTATCTCAGGAAGTAAGTCCAAGAACAATGAGCAAG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTTGCTTTTGCTCCTCTaGGTAAAAGACAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHLLLLL*VKDKAV
Trigger: AACAGCTTTGTCTTTTACCCAGAGGAGCAAAAGCAA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCACCTCTTCAGGAAATaGCCGATGTTTCACAGAATA +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHHLFRK*PMFHRI
Trigger: TATTCTGTGAAACATCGGCCATTTCCTGAAGAGGTG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGTCAAAAGGACGACATaGCAAGAGATCCAGATACCC +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKVKRTT*QEIQIP
Trigger: GGGTATCTGGATCTCTTGCCATGTCGTCCTTTTGAC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGTGGCTGAACAGTTCTaGAAGACTCCACATTCTTTA +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHVAEQF*KTPHSL
Trigger: TAAAGAATGTGGAGTCTTCCAGAACTGTTCAGCCAC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAGTGGCTGAACAGTTCTaGAAGACTCCACATTCTTTA +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLVAEQF*KTPHSL
Trigger: TAAAGAATGTGGAGTCTTCCAGAACTGTTCAGCCAC...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTTTGAATCACTATCTTaGTCCGAGATGTTACTTTCC +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAFESLS*SEMLLS
Trigger: GGAAAGTAACATCTCGGACCAAGATAGTGATTCAAA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTCAAGTGTCAGGGATaGCTGTTTCAGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLKCQG*LFQNSW
Trigger: CCAGGAATTCTGAAACAGCCATCCCTGACACTTGAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGCGCCTGGTAAGGTATaGGTATCCCATATTCCACTG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNAPGKV*VSHIPL
Trigger: CAGTGGAATATGGGATACCCATACCTTACCAGGCGC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTTTCAAAGGCCCAATaGATGGAAGAGGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLSKAQ*MEEGLK
Trigger: CTTGAGACCCTCTTCCATCCATTGGGCCTTTGAAAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTATATGCAAGGCACTGTaGAATCCCAAATTATACCTT +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAICKAL*NPKLYL
Trigger: AAGGTATAATTTGGGATTCCACAGTGCCTTGCATAT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATATACAAACAAACCTCTaGACCTTCTTCCCTAACCGA +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHIQTNL*TFFPNR
Trigger: TCGGTTAGGGAAGAAGGTCCAGAGGTTTGTTTGTAT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTACATTCAATATTCCATaGGCTTCTTCTGGACAAAGG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSTFNIP*ASSGQR
Trigger: CCTTTGTCCAGAAGAAGCCCATGGAATATTGAATGT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAATCACCAAATGCAGTaGCCTCCACTCAGAGTACAT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVNHQMQ*PPLRVH
Trigger: ATGTACTCTGAGTGGAGGTCACTGCATTTGGTGATT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTTAAGGCAGGGATACTaGTTCAATTCTTGCGGCATT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLRQGY*FNSCGI
Trigger: AATGCCGCAAGAATTGAATCAGTATCCCTGCCTTAA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGGGTTCTGAACTAGTCTaGTTTGGACTTGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGGSELV*FGLDRG
Trigger: TCCTCTGTCAAGTCCAAATCAGACTAGTTCAGAACC...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCTATTGGTGCGACTATaGCTCTTCAGGTTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHLLVRL*LFRLFS
Trigger: AGAAAATAACCTGAAGAGTCATAGTCGCACCAATAG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGCTTCCACCACTTGCTaGACTAATACCACTATTGGT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSASTTC*TNTTIG
Trigger: ACCAATAGTGGTATTAGTTCAGCAAGTGGTGGAAGC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCTCTTAAGAGAGCTTaGGCAGGTCTCTCACTATCG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNSLKRA*AGLSLS
Trigger: CGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAGA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCAGACACAGAGACACTaGAAAGCTGCCACTATCATG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNQTQRH*KAATIM
Trigger: CATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGCAAATCTGGAATGCTaGGATCTGCTTTCACAAAAG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLANLEC*DLLSQK
Trigger: CTTTTGTGAAAGCAGATCTCAGCATTCCAGATTTGC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCAAAAATCCAAAGTGTaGGAGAAAAAGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVQKSKV*EKKAGC
Trigger: ACAGCCCGCCTTTTTCTCTCACACTTTGGATTTTTG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCAAGTGCAATAAGGTaGGGAGGTAGACGACTATTT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSSAIR*GGRRLF
Trigger: AAATAGTCGTCTACCTCCTCACCTTATTGCACTTGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACATAAGATCCATATTTaGATCACTATCTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSHKIHI*ITILVR
Trigger: TCGGACCAAGATAGTGATTCAAATATGGATCTTATG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGGGACTGAGCCTCTGTaGGGAATTAAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNGTEPL*GIKIVC
Trigger: ACAGACAATCTTAATTCCTCACAGAGGCTCAGTCCC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAAGAACTGCAGTTCTTaGGTCCAACCTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSKNCSS*VQPPGK
Trigger: TTTTCCAGGAGGTTGGACTCAAGAACTGCAGTTCTT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTTTGCTGCTTGGTCCTaGAATAAGAGACAATGGATG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLFAAWS*NKRQWM
Trigger: CATCCATTGTCTCTTATTTCAGGACCAAGCAGCAAA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAAAGTCCAGAAAACATaGCAACAGCCATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSKVQKT*QQPFLT
Trigger: TGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTGAATTTAGAGCTAACTaGAGGATCAGCAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLEFRAN*RISKTN
Trigger: GTTGGTCTTGCTGATCCTTCAGTTAGCTCTAAATTC...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGGAAGGAAAATGTGCATaGGTATGCGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGEGKCA*VCECVC
Trigger: ACACACACACTCGCATACTCATGCACATTTTCCTTC...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTGAAGGTAACCGTTCATaGAGGCCTCATACACAGAAC +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVEGNRS*RPHTQN
Trigger: GTTCTGTGTATGAGGCCTTCATGAACGGTTACCTTC...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTACCTTCCAGAAGAAATaGATACTCTTAAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSTFQKK*ILLKTL
Trigger: CAGAGTCTTTAAGAGTATTCATTTCTTCTGGAAGGT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTTAAAACAGACCATCTaGCTCCAATGTCATTTCATG +
Preference number: 4 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHLKQTI*LQCHFM
Trigger: CATGAAATGACATTGGAGTCAGATGGTCTGTTTTAA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGGTCACTATAAGAGATaGGGACTTGGGAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKGHYKR*GLGKLG
Trigger: ACCAAGTTTCCCAAGTCCTCATCTCTTATAGTGACC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTAGATTCTCAGCAATaGCACCTTGAACAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLDSQQ*HLEQLV
Trigger: CACCAACTGTTCAAGGTGGCATTGCTGAGAATCTAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACAATCTGGAAGTGAGTaGACAAATGACCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKQSGSE*TNDLAP
Trigger: TGGAGCAAGGTCATTTGTGCACTCACTTCCAGATTG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCAATCTGGAAGTGAGTaGACAAATGACCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVQSGSE*TNDLAP
Trigger: TGGAGCAAGGTCATTTGTGCACTCACTTCCAGATTG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGCCTCAGCTCTTCCTaGTTCATAGTTATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSLSSS*FIVIRK
Trigger: TTTCCTGATAACTATGAAGCAGGAAGAGCTGAGGCT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR GCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCATCACTTTTACCTTTaGAAGGCCAGAGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVHHFYL*KAREEL
Trigger: GAGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGCCACTATCATGGAGTaGAGATCCCTGGAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNATIME*RSLECK
Trigger: TTTACACTCCAGGGATCTGCACTCCATGATAGTGGC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGAGACACTGAAAAGCTaGCACTATCATGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNETLKS*HYHGVQ
Trigger: CTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTTTACCCTCATAGATaGAGGGTTTGGCTCCTTATC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLYPHR*RVWLLI
Trigger: GATAAGGAGCCAAACCCTGCATCTATGAGGGTAAAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAATGCGCCGAGCAACTaGATAATGCATGTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNNAPSN*IMHVRV
Trigger: CACCCTAACATGCATTATGCAGTTGCTCGGCGCATT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAAGACAAAGCTGTTGTaGCCAAGCAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSKTKLL*PSKSSR
Trigger: TCTGGAAGACTTGCTTGGGCACAACAGCTTTGTCTT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAAGACAAAGCTGTTGTaGCCAAGCAAGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVKTKLL*PSKSSR
Trigger: TCTGGAAGACTTGCTTGGGCACAACAGCTTTGTCTT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCAATCTGCTGGGCCATaGCACTCCTTAATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVQSAGP*HSLIFR
Trigger: ACGAAAAATTAAGGAGTGGCATGGCCCAGCAGATTG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACAATCTGCTGGGCCATaGCACTCCTTAATTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSQSAGP*HSLIFR
Trigger: ACGAAAAATTAAGGAGTGGCATGGCCCAGCAGATTG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCATCTTTATCCTATATaGCCTCTCCCATGTTACCAT +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHHLYPI*PLPCYH
Trigger: ATGGTAACATGGGAGAGGGCATATAGGATAAAGATG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTATTTATAGCCTTCTCTaGTCACTTCAACTAGAACAA +
Preference number: 4 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAIYSLL*SLQLEQ
Trigger: TTGTTCTAGTTGAAGTGAGCAGAGAAGGCTATAAAT...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTTGGGAAACTTGGTTTaGTTCAACAAGTATTTACTG +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDLGNLV*FNKYLL
Trigger: CAGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTACCTTGAACAGTTGGTaGGGCCAGAAGTATGTCGTT +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVTLNSW*GQKYVV
Trigger: AACGACATACTTCTGGCCCCACCAACTGTTCAAGGT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATACCTTGAACAGTTGGTaGGGCCAGAAGTATGTCGTT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNTLNSW*GQKYVV
Trigger: AACGACATACTTCTGGCCCCACCAACTGTTCAAGGT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACTCATTATCCATTTCTaGAGGGATCAGACTGGCATC +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKLIIHF*RDQTGI
Trigger: GATGCCAGTCTGATCCCTCCAGAAATGGATAATGAG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCATTTGGGTGTTGTTaGGGTCCGTTTCAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSFGCC*GPFQFA
Trigger: TGCAAACTGAAACGGACCCCAACAACACCCAAATGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGCCCCTAATATCATTTaGGTGTTGTTGGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNAPNII*VLLGSV
Trigger: AACGGACCCCAACAACACCCAAATGATATTAGGGGC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACCATCTGGCAACCAATaGCTTCCAAAAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSPSGNQ*LPKVLN
Trigger: ATTCAGCACTTTTGGAAGCCATTGGTTGCCAGATGG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCATAGATGCAGGGTTTaGCTCCTTATCTCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLHRCRV*LLISFV
Trigger: TACAAAGGAGATAAGGAGCCAAACCCTGCATCTATG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTATGCTTGTTTATGGTTaGCAGCCTGGAGTATTTAAT +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSMLVYG*QPGVFN
Trigger: ATTAAATACTCCAGGCTGCCAACCATAAACAAGCAT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCACCTCTTCAGGAAATaGCCGATGTTTCACAGAATA +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLHLFRK*PMFHRI
Trigger: TATTCTGTGAAACATCGGCCATTTCCTGAAGAGGTG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTATTTCATGCAAATCTaGAATGCTGAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDYFMQI*NAEICF
Trigger: AAAGCAGATCTCAGCATTCCAGATTTGCATGAAATA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGTGGCTGAACAGTTCTaGAAGACTCCACATTCTTTA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLVAEQF*KTPHSL
Trigger: TAAAGAATGTGGAGTCTTCCAGAACTGTTCAGCCAC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTGTCAGTGTGACAGCTaGATGACAAGAAGACCTACA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGCQCDS*MTRRPT
Trigger: TGTAGGTCTTCTTGTCATCCAGCTGTCACACTGACA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATTTCTGATCTGTTCCTaGGTCACTCAGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKFLICS*VTQKLR
Trigger: CCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAATCCAGTAGTTCTCTaGGAGAGATCTGAATTAGTA +
Preference number: 4 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSNPVVL*ERSELV
Trigger: TACTAATTCAGATCTCTCCCAGAGAACTACTGGATT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAATCCTTGGATGTTCTaGGTCTGGCCACCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNNPWMF*VWPPQK
Trigger: CTTTTGAGGTGGCCAGACCCAGAACATCCAAGGATT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATTACTGGCCAAAGGTGTaGGTACTTGTATTCATCAAT +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHYWPKV*VLVFIN
Trigger: ATTGATGAATACAAGTACCCACACCTTTGGCCAGTA...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTTAAGGCAGGGATACTaGTTCAATTCTTGCGGCATT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLRQGY*FNSCGI
Trigger: AATGCCGCAAGAATTGAATCAGTATCCCTGCCTTAA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACTGACAGCAGCACTTTaGGGCATACTTAATCTATTC +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKLTAAL*GILNLF
Trigger: GAATAGATTAAGTATGCCTCAAAGTGCTGCTGTCAG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTGACAGCAGCACTTTaGGGCATACTTAATCTATTC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLTAAL*GILNLF
Trigger: GAATAGATTAAGTATGCCTCAAAGTGCTGCTGTCAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGGTTCTGAACTAGTCTaGTTTGGACTTGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNGSELV*FGLDRG
Trigger: TCCTCTGTCAAGTCCAAATCAGACTAGTTCAGAACC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCTTGGACTTACTTCCTaGGATACCCAGTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLGLTS*DTQFHN
Trigger: ATTGTGGAACTGGGTATCTCAGGAAGTAAGTCCAAG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGGGTACAAAAAGCTTCTaGTTTGCTTTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVGTKSF*FAFAPL
Trigger: CAGAGGAGCAAAAGCAAATCAGAAGCTTTTTGTACC...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGGTACAAAAAGCTTCTaGTTTGCTTTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSGTKSF*FAFAPL
Trigger: CAGAGGAGCAAAAGCAAATCAGAAGCTTTTTGTACC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATTCTTTTTGTCAGTGTaGCAGCTGGATGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSFFLSV*QLDDKK
Trigger: CTTCTTGTCATCCAGCTGTCACACTGACAAAAAGAA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCATGTTTGTCAATTATaGGGAAATCCAGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHHVCQL*GNPVVL
Trigger: GAGAACTACTGGATTTCCTCATAATTGACAAACATG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCTGAAGAATCACACTaGAGAAGTACATCTGCATCA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSEESH*RSTSAS
Trigger: TGATGCAGATGTACTTCTTCAGTGTGATTCTTCAGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCACAAAACACATCTTTaGGCAAGGCTAACTTCCACT +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGHKTHL*ARLTST
Trigger: AGTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCACAAAACACATCTTTaGGCAAGGCTAACTTCCACT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVHKTHL*ARLTST
Trigger: AGTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATGGGCTTTAAAATGGTaGATAGAGAACTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSWALKW*IENYCQ
Trigger: CTGGCAGTAGTTCTCTATTCACCATTTTAAAGCCCA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCAGGAAGAGAGAACCTaGATGGGCTTTAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVQEERT*MGFKMV
Trigger: CACCATTTTAAAGCCCATTCAGGTTCTCTCTTCCTG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTATCACTTCTTCTTGTTaGGATCCTTCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLITSSC*DPSPSS
Trigger: TGATGATGGTGAAGGATCTCAACAAGAAGAAGTGAT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAGCCTCAGCTCTTCCTaGTTCATAGTTATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSSLSSS*FIVIRK
Trigger: TTTCCTGATAACTATGAAGCAGGAAGAGCTGAGGCT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAAGTACCGGAAACTATaGTTGTTTATGGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVKYRKL*LFMVGS
Trigger: GCTGCCAACCATAAACAAGCATAGTTTCCGGTACTT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAAGAGTGGGGTATCACTaGTGTCTTATAACTTTTAAC +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLRVGYH*CLITFN
Trigger: GTTAAAAGTTATAAGACAGCAGTGATACCCCACTCT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCCTTCACAAACTACTaGAGTTTGCTGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNSFTNY*SLLLGP
Trigger: AGGACCAAGCAGCAAACTGCAGTAGTTTGTGAAGGA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATAACCAAGAGCTGCTATaGCCATATTTCTTGCTTATA +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHNQELL*PYFLLI
Trigger: TATAAGCAAGAAATATGGGCATAGCAGCTCTTGGTT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTGCAGAGTCTGACAAATaGTTCCCTAGTGTATGGAGA +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVAESDK*FPSVWR
Trigger: TCTCCATACACTAGGGAAGCATTTGTCAGACTCTGC...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGCAGAGTCTGACAAATaGTTCCCTAGTGTATGGAGA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNAESDK*FPSVWR
Trigger: TCTCCATACACTAGGGAAGCATTTGTCAGACTCTGC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATTTGGGTGTTGTTaGGGTCCGTTTCAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNSFGCC*GPFQFA
Trigger: TGCAAACTGAAACGGACCCCAACAACACCCAAATGA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCCATCTGGCAACCAATaGCTTCCAAAAGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNPSGNQ*LPKVLN
Trigger: ATTCAGCACTTTTGGAAGCCATTGGTTGCCAGATGG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTTGCTCATTGTTCTTaGACTTACTTCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLAHCS*TYFLRY
Trigger: GTATCTCAGGAAGTAAGTCCAAGAACAATGAGCAAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAACTATGCTTGTTTATaGTTGGCAGCCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLNYACL*LAAWSI
Trigger: AATACTCCAGGCTGCCAACCATAAACAAGCATAGTT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGGTCATTTTTAGGAACTaGGCGAGGTTCAGGTACAAA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVVIFRN*ARFRYK
Trigger: TTTGTACCTGAACCTCGCCCAGTTCCTAAAAATGAC...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACACCTCTTCAGGAAATaGCCGATGTTTCACAGAATA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSHLFRK*PMFHRI
Trigger: TATTCTGTGAAACATCGGCCATTTCCTGAAGAGGTG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTTGCAATCCGTAACTaGGTCAGGAAAACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLAIRN*VRKTSL
Trigger: AAGAGAAGTTTTCCTGACCCAGTTACGGATTGCAAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACTTGCAATCCGTAACTaGGTCAGGAAAACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSLAIRN*VRKTSL
Trigger: AAGAGAAGTTTTCCTGACCCAGTTACGGATTGCAAG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATTTGAATCACTATCTTaGTCCGAGATGTTACTTTCC +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLFESLS*SEMLLS
Trigger: GGAAAGTAACATCTCGGACCAAGATAGTGATTCAAA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATAATCCAGTAGTTCTCTaGGAGAGATCTGAATTAGTA +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHNPVVL*ERSELV
Trigger: TACTAATTCAGATCTCTCCCAGAGAACTACTGGATT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGAAAAGAGGCTGTCATaGAAATCTTTAAAACAGACC +
Preference number: 4 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHEKRLS*KSLKQT
Trigger: GGTCTGTTTTAAAGATTTCCATGACAGCCTCTTTTC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTTTAAATGCAGGAAATaGAGGACCATATGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLFKCRK*RTICKA
Trigger: CGCTTTACATATGGTCCTTCATTTCCTGCATTTAAA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTTTAAATGCAGGAAATaGAGGACCATATGTAAAGCG +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLFKCRK*RTICKA
Trigger: CGCTTTACATATGGTCCTTCATTTCCTGCATTTAAA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTATTGGTGCGACTATaGCTCTTCAGGTTATTTTCT +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGLLVRL*LFRLFS
Trigger: AGAAAATAACCTGAAGAGTCATAGTCGCACCAATAG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCTATTGGTGCGACTATaGCTCTTCAGGTTATTTTCT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLLVRL*LFRLFS
Trigger: AGAAAATAACCTGAAGAGTCATAGTCGCACCAATAG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGGTACAAAAAGCTTCTaGTTTGCTTTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNGTKSF*FAFAPL
Trigger: CAGAGGAGCAAAAGCAAATCAGAAGCTTTTTGTACC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGGAAATCACTTCTTGTTaGGATCCTTCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGEITSC*DPSPSS
Trigger: TGATGATGGTGAAGGATCTCAACAAGAAGTGATTTC...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397040.5
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCATAAGATCCATATTTaGATCACTATCTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLHKIHI*ITILVR
Trigger: TCGGACCAAGATAGTGATTCAAATATGGATCTTATG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTTAAGATTGTCTGTATaGTTGGGGAAAAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLRLSV*LGKSSS
Trigger: ACTTGAGCTTTTCCCCAATCATACAGACAATCTTAA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAGTTGTAGATCTCAGTaGAGTGCTACTATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSCRSQ*SATICS
Trigger: ACTGCAAATAGTAGCACTTCACTGAGATCTACAACT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTCCATGCTATCAACATaGGTCTTTAAATGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLSMLST*VFKCPV
Trigger: TACAGGACATTTAAAGACTCATGTTGATAGCATGGA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCATGTTTGTCAATTATaGGGAAATCCAGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLHVCQL*GNPVVL
Trigger: GAGAACTACTGGATTTCCTCATAATTGACAAACATG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCTGAAGAATCACACTaGAGAAGTACATCTGCATCA +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSEESH*RSTSAS
Trigger: TGATGCAGATGTACTTCTTCAGTGTGATTCTTCAGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCACAAAACACATCTTTaGGCAAGGCTAACTTCCACT +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVHKTHL*ARLTST
Trigger: AGTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTTAAAACAGACCATCTaGCTCCAATGTCATTTCATG +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLLKQTI*LQCHFM
Trigger: CATGAAATGACATTGGAGTCAGATGGTCTGTTTTAA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCTGAAGAACATGAGTTaGTATTCTGAGAAACACACT +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLLKNMS*YSEKHT
Trigger: AGTGTGTTTCTCAGAATATCAACTCATGTTCTTCAG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAAGTATGTCGTTAATCTaGAGAAGAAACAACAGTAAG +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLSMSLI*RRNNSK
Trigger: CTTACTGTTGTTTCTTCTGCAGATTAACGACATACT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAATCAGGAAATTCACTTaGATCAAACATAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLIRKFT*IKHRIG
Trigger: TCCAATCCTATGTTTGATGCAAGTGAATTTCCTGAT...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAAGTACCGGAAACTATaGTTGTTTATGGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNKYRKL*LFMVGS
Trigger: GCTGCCAACCATAAACAAGCATAGTTTCCGGTACTT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCCCACAAACTTTATTTaGATCCCCATTAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLPTNFI*IPIKGQ
Trigger: TTGTCCTTTAATGGGGATGCAAATAAAGTTTGTGGG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGGAATTACAAGGAGTTaGCAGAATTTAGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLGITRS*QNLELT
Trigger: AGTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCTCCCAGATCACAAATaGATTCAACATGATTGTTCA +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLLPDHK*IQHDCS
Trigger: TGAACAATCATGTTGAATGCATTTGTGATCTGGGAG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAAGAGCTTATAATAGCTaGGTTACTCAAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKRAYNS*VTQIHR
Trigger: CCTGTGGATTTGAGTAACCCAGCTATTATAAGCTCT...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTATGCTTGTTTATGGTTaGCAGCCTGGAGTATTTAAT +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLMLVYG*QPGVFN
Trigger: ATTAAATACTCCAGGCTGCCAACCATAAACAAGCAT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGTCATTTTTAGGAACTaGGCGAGGTTCAGGTACAAA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNVIFRN*ARFRYK
Trigger: TTTGTACCTGAACCTCGCCCAGTTCCTAAAAATGAC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCTTGCAATCCGTAACTaGGTCAGGAAAACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLAIRN*VRKTSL
Trigger: AAGAGAAGTTTTCCTGACCCAGTTACGGATTGCAAG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGTGGCTGAACAGTTCTaGAAGACTCCACATTCTTTA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNVAEQF*KTPHSL
Trigger: TAAAGAATGTGGAGTCTTCCAGAACTGTTCAGCCAC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTTTGAATCACTATCTTaGTCCGAGATGTTACTTTCC +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLFESLS*SEMLLS
Trigger: GGAAAGTAACATCTCGGACCAAGATAGTGATTCAAA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAATCCAGTAGTTCTCTaGGAGAGATCTGAATTAGTA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLNPVVL*ERSELV
Trigger: TACTAATTCAGATCTCTCCCAGAGAACTACTGGATT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTAGGACTTGGGAAACTTaGTTTGCTTCAACAAGTATT +
Preference number: 4 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLRTWET*FASTSI
Trigger: AATACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCT...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAACATAAGATCCATATTTaGATCACTATCTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKHKIHI*ITILVR
Trigger: TCGGACCAAGATAGTGATTCAAATATGGATCTTATG...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACATAAGATCCATATTTaGATCACTATCTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSHKIHI*ITILVR
Trigger: TCGGACCAAGATAGTGATTCAAATATGGATCTTATG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTTAAGATTGTCTGTATaGTTGGGGAAAAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGLRLSV*LGKSSS
Trigger: ACTTGAGCTTTTCCCCAATCATACAGACAATCTTAA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGAAAGTCCAGAAAACATaGCAACAGCCATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGKVQKT*QQPFLT
Trigger: TGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTT...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCTGAAGAATCACACTaGAGAAGTACATCTGCATCA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNSEESH*RSTSAS
Trigger: TGATGCAGATGTACTTCTTCAGTGTGATTCTTCAGA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTATCACTTCTTCTTGTTaGGATCCTTCACCATCATCA +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVITSSC*DPSPSS
Trigger: TGATGATGGTGAAGGATCTCAACAAGAAGAAGTGAT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTATCAGGAAATTCACTTaGATCAAACATAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLIRKFT*IKHRIG
Trigger: TCCAATCCTATGTTTGATGCAAGTGAATTTCCTGAT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGGGTCCGTTTCAGTTTaGAAGGCACCTATTAATATA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNGSVSV*KAPINI
Trigger: TATATTAATAGGTGCCTTGCAAACTGAAACGGACCC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATATGTTAATTACAGTCTaGCTCACCAGAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNMLITV*LTRKPR
Trigger: TCTTGGCTTTCTGGTGAGGCAGACTGTAATTAACAT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCCCACAAACTTTATTTaGATCCCCATTAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGPTNFI*IPIKGQ
Trigger: TTGTCCTTTAATGGGGATGCAAATAAAGTTTGTGGG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAGAGTGGGGTATCACTaGTGTCTTATAACTTTTAAC +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVRVGYH*CLITFN
Trigger: GTTAAAAGTTATAAGACAGCAGTGATACCCCACTCT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCATCTTTATCCTATATaGCCTCTCCCATGTTACCAT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNHLYPI*PLPCYH
Trigger: ATGGTAACATGGGAGAGGGCATATAGGATAAAGATG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTATTTATAGCCTTCTCTaGTCACTTCAACTAGAACAA +
Preference number: 4 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLIYSLL*SLQLEQ
Trigger: TTGTTCTAGTTGAAGTGAGCAGAGAAGGCTATAAAT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAGAGCTTATAATAGCTaGGTTACTCAAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNRAYNS*VTQIHR
Trigger: CCTGTGGATTTGAGTAACCCAGCTATTATAAGCTCT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCTTGCTCATTGTTCTTaGACTTACTTCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLAHCS*TYFLRY
Trigger: GTATCTCAGGAAGTAAGTCCAAGAACAATGAGCAAG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAACTATGCTTGTTTATaGTTGGCAGCCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNNYACL*LAAWSI
Trigger: AATACTCCAGGCTGCCAACCATAAACAAGCATAGTT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTTTGCTTTTGCTCCTCTaGGTAAAAGACAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVLLLLL*VKDKAV
Trigger: AACAGCTTTGTCTTTTACCCAGAGGAGCAAAAGCAA...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTGCTTTTGCTCCTCTaGGTAAAAGACAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLLLLL*VKDKAV
Trigger: AACAGCTTTGTCTTTTACCCAGAGGAGCAAAAGCAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCATAAGATCCATATTTaGATCACTATCTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNHKIHI*ITILVR
Trigger: TCGGACCAAGATAGTGATTCAAATATGGATCTTATG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTAAGATTGTCTGTATaGTTGGGGAAAAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLRLSV*LGKSSS
Trigger: ACTTGAGCTTTTCCCCAATCATACAGACAATCTTAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTTTTCCAGTGGCTCCTTaGATTTTTATCCGGAATAAT +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVFPVAP*IFIRNN
Trigger: ATTATTCCGGATAAAAATTCAAGGAGCCACTGGAAA...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTTCCAGTGGCTCCTTaGATTTTTATCCGGAATAAT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNFPVAP*IFIRNN
Trigger: ATTATTCCGGATAAAAATTCAAGGAGCCACTGGAAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCATGTTTGTCAATTATaGGGAAATCCAGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNHVCQL*GNPVVL
Trigger: GAGAACTACTGGATTTCCTCATAATTGACAAACATG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR TCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAAAGTCCAGAAAACATaGCAACAGCCATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNKVQKT*QQPFLT
Trigger: TGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAATCAGGAAATTCACTTaGATCAAACATAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKIRKFT*IKHRIG
Trigger: TCCAATCCTATGTTTGATGCAAGTGAATTTCCTGAT...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAATCAGGAAATTCACTTaGATCAAACATAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSIRKFT*IKHRIG
Trigger: TCCAATCCTATGTTTGATGCAAGTGAATTTCCTGAT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR GCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCCTATCAAACTGTTCTaGTGTGTTATAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNPIKLF*CVIVPK
Trigger: TTTGGGAACTATAACACAGCAGAACAGTTTGATAGG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAGAGTGGGGTATCACTaGTGTCTTATAACTTTTAAC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNRVGYH*CLITFN
Trigger: GTTAAAAGTTATAAGACAGCAGTGATACCCCACTCT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGATTTATAGCCTTCTCTaGTCACTTCAACTAGAACAA +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGIYSLL*SLQLEQ
Trigger: TTGTTCTAGTTGAAGTGAGCAGAGAAGGCTATAAAT...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAATTTATAGCCTTCTCTaGTCACTTCAACTAGAACAA +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSIYSLL*SLQLEQ
Trigger: TTGTTCTAGTTGAAGTGAGCAGAGAAGGCTATAAAT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR GCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTGGAATTACAAGGAGTTaGCAGAATTTAGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVGITRS*QNLELT
Trigger: AGTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCC...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAATATGTTCCTCCAGTaGTATTCTACTCAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVNMFLQ*YSTQSD
Trigger: ATCACTTTGAGTAGAATAGCACTGGAGGAACATATT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAATATGTTCCTCCAGTaGTATTCTACTCAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSNMFLQ*YSTQSD
Trigger: ATCACTTTGAGTAGAATAGCACTGGAGGAACATATT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTTGGGAAACTTGGTTTaGTTCAACAAGTATTTACTG +
Preference number: 4 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGLGNLV*FNKYLL
Trigger: CAGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATATGCTTGTTTATGGTTaGCAGCCTGGAGTATTTAAT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNMLVYG*QPGVFN
Trigger: ATTAAATACTCCAGGCTGCCAACCATAAACAAGCAT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATATTTCATGCAAATCTaGAATGCTGAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKYFMQI*NAEICF
Trigger: AAAGCAGATCTCAGCATTCCAGATTTGCATGAAATA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CCA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTATTTCATGCAAATCTaGAATGCTGAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVYFMQI*NAEICF
Trigger: AAAGCAGATCTCAGCATTCCAGATTTGCATGAAATA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATATTTCATGCAAATCTaGAATGCTGAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSYFMQI*NAEICF
Trigger: AAAGCAGATCTCAGCATTCCAGATTTGCATGAAATA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTTGAATCACTATCTTaGTCCGAGATGTTACTTTCC +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNFESLS*SEMLLS
Trigger: GGAAAGTAACATCTCGGACCAAGATAGTGATTCAAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CCA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAACATGAACAGGTTATaGCAAACTTTAAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSNMNRL*QTLNQE
Trigger: CTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTATATGCAAGGCACTGTaGAATCCCAAATTATACCTT +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVICKAL*NPKLYL
Trigger: AAGGTATAATTTGGGATTCCACAGTGCCTTGCATAT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTAGTATGTCGTTAATCTaGAGAAGAAACAACAGTAAG +
Preference number: 4 (lower is better)
Translates to: GKNSDHELKSILVKELSVSMSLI*RRNNSK
Trigger: CTTACTGTTGTTTCTTCTGCAGATTAACGACATACT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR GCA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAATATGTTCCTCCAGTaGTATTCTACTCAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNNMFLQ*YSTQSD
Trigger: ATCACTTTGAGTAGAATAGCACTGGAGGAACATATT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CCA 90 bp CCGCCTCACGCGACCCGCGCCATAGGGCTGGCGCTTTCACCGCCCTaGCCGGCCGTCCTCAGGCGGTCCGTCAGTCCACCCGTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: PPHATRAIGLALSPP*PAVLRRSVSPPVSD
Trigger: GTCGCTGACGGGTGGACTGACGGACCGCCTGAGGACGGCCGGCCAGGGCGGTGAAAGCGCCAGCCCTATGGCGCGGGTCGCGTGAGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS CCA 90 bp TCCCAGGGCGCCAAGGGACGACGAAGGCCACTCGAGCCAGCCGGCTaGGATCTGCTCAGGCAACTTCCGACTGCCAGGGGCGGCGGCGTC +
Preference number: 5 (lower is better)
Translates to: SQGAKGRRRPLEPAG*DLLRQLPTARGGGV
Trigger: GACGCCGCCGCCCCTGGCAGTCGGAAGTTGCCTGAGCAGATCCCAGCCGGCTGGCTCGAGTGGCCTTCGTCGTCCCTTGGCGCCCTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS GCA 90 bp GCGCCAAGGGACGACGAAGGCCACTCGAGCCAGCCGGCTGGGATCTaGTCAGGCAACTTCCGACTGCCAGGGGCGGCGGCGTCAAATAAC +
Preference number: 5 (lower is better)
Translates to: APRDDEGHSSQPAGI*SGNFRLPGAAASNN
Trigger: GTTATTTGACGCCGCCGCCCCTGGCAGTCGGAAGTTGCCTGAGCAGATCCCAGCCGGCTGGCTCGAGTGGCCTTCGTCGTCCCTTGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGCAGGAGGCGGGGGCTaGCAATCCGTAACTGGGTCA +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLAGGGG*QSVTGS
Trigger: TGACCCAGTTACGGATTGCAAGCCCCCGCCTCCTGC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS CCA 90 bp GGAAGCCTGAAGGGGACACTGGGATTTTGCAGACTCCTCAGCAGATaGCTTGGAGTAGGAGGCTGGAGGAATCATGAACAGGCACAGGCT +
Preference number: 5 (lower is better)
Translates to: GSLKGTLGFCRLLSR*LGVGGWRNHEQAQA
Trigger: AGCCTGTGCCTGTTCATGATTCCTCCAGCCTCCTACTCCAAGCCATCTGCTGAGGAGTCTGCAAAATCCCAGTGTCCCCTTCAGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS-3UTR CAA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCTCAGCAATGCCACCTaGAACAGTTGGTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRLSNAT*NSWWGQ
Trigger: CTGGCCCCACCAACTGTTCAAGGTGGCATTGCTGAG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS TCA 90 bp ACAGAAACTCTTGTCTCAGGTCCAAGGGGAGGAACAGGGCGACCCTaGGGCAGCTTCCTCATTCTGGAACTGGGACTGAGCTACATGAAG +
Preference number: 5 (lower is better)
Translates to: TETLVSGPRGGTGRP*GSFLILELGLSYMK
Trigger: CTTCATGTAGCTCAGTCCCAGTTCCAGAATGAGGAAGCTGCCTCAGGGTCGCCCTGTTCCTCCCCTTGGACCTGAGACAAGAGTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS GCA 90 bp CCTGGAAGTGAGTGCACAAATGACCTTGCTCCACTGCTCCACCACTaGTGGGTGATGCCTCCAGTTAGCCACCATCTCCTTGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: PGSECTNDLAPLLHH*WVMPPVSHHLLGCF
Trigger: AAAACAGCCAAGGAGATGGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACTCACTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495949.1
CDS CCA 90 bp GGAAGTGAGTGCACAAATGACCTTGCTCCACTGCTCCACCACTGCTaGGTGATGCCTCCAGTTAGCCACCATCTCCTTGGCTGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GSECTNDLAPLLHHC*VMPPVSHHLLGCFP
Trigger: TGGAAAACAGCCAAGGAGATGGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACTCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000495949.1
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGGACGGACTACAGCATTaGCCACCTCTCGTCCAACGC +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLDGLQH*PPLVQR
Trigger: GCGTTGGACGAGAGGTGGCAAATGCTGTAGTCCGTC...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTGGCGCCACTGGGAGTaGAGTCTTTGGGTGACGAGA +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLWRHWE*SLWVTR
Trigger: TCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS GCA 90 bp TCTGGAAGTGAGTGCACAAATGACCTTGCTCCACTGCTCCACCACTaGTGGGTGATGCCTCCAGTTAGCCACCATCTCCTTGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SGSECTNDLAPLLHH*WVMPPVSHHLLGCF
Trigger: AAAACAGCCAAGGAGATGGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACTCACTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS GCA 90 bp GGTGAAGGAAGGCAGGGCAATGACAATAACCTACCTGGAAGTGAGTaGACAAATGACCTTGCTCCACTGCTCCACCACTGCTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: GEGRQGNDNNLPGSE*TNDLAPLLHHCWVM
Trigger: CATCACCCAGCAGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACTCACTTCCAGGTAGGTTATTGTCATTGCCCTGCCTTCCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495949.1
CDS CCA 90 bp GCTCTGTCAGCCAGACACAGAGACACTGAAAAGCTGCCACTATCATaGAGTGCAGATCCCTGGAGTGTAAAGGAGCTGGCCGACTACACT +
Preference number: 5 (lower is better)
Translates to: ALSARHRDTEKLPLS*SADPWSVKELADYT
Trigger: AGTGTAGTCGGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTGGCTGACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGACGGACTACAGCATTaGCCACCTCTCGTCCAACGC +
Preference number: 5 (lower is better)
Translates to: HPPPAYPTDIATELFKPQDGLQH*PPLVQR
Trigger: GCGTTGGACGAGAGGTGGCAAATGCTGTAGTCCGTC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCTCAGCAATGCCACCTaGAACAGTTGGTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLSNAT*NSWWGQ
Trigger: CTGGCCCCACCAACTGTTCAAGGTGGCATTGCTGAG...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGTCTGGCTCCAGCTGCTaGTTCCGGTACTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRSGSSC*FRYLLT
Trigger: TGTCAACAAGTACCGGAACAAGCAGCTGGAGCCAGA...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS CCA 90 bp TTGCCACCTCTCGTCCAACGCTCTCTGGATAGCTGTGCAGCACACTaGTATGGCCTTGATCATTCTGAATCACCAAATGCAGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: LPPLVQRSLDSCAAH*YGLDHSESPNAVTS
Trigger: GGAGGTCACTGCATTTGGTGATTCAGAATGATCAAGGCCATACCAGTGTGCTGCACAGCTATCCAGAGAGCGTTGGACGAGAGGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CCA 90 bp TGTTTGGAATTCCTGGGCAGGAGGCGGGGGCTTGCAATCCGTAACTaGGTCAGGAAAACTTCTCTTCTGCAATTCCTCCTCACTCTGTTG +
Preference number: 5 (lower is better)
Translates to: CLEFLGRRRGLAIRN*VRKTSLLQFLLTLL
Trigger: CAACAGAGTGAGGAGGAATTGCAGAAGAGAAGTTTTCCTGACCCAGTTACGGATTGCAAGCCCCCGCCTCCTGCCCAGGAATTCCAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS CCA 90 bp CTGGGATTTTGCAGACTCCTCAGCAGATGGCTTGGAGTAGGAGGCTaGAGGAATCATGAACAGGCACAGGCTAGGAAAGAAAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: LGFCRLLSRWLGVGG*RNHEQAQARKESQA
Trigger: TGCTTGGCTTTCTTTCCTAGCCTGTGCCTGTTCATGATTCCTCCAGCCTCCTACTCCAAGCCATCTGCTGAGGAGTCTGCAAAATCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGAGTGCACAAATGACCTaGCTCCACTGCTCCACCACT +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLSAQMT*LHCSTT
Trigger: AGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAGCAGGAGGCGGGGGCTaGCAATCCGTAACTGGGTCA +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSAGGGG*QSVTGS
Trigger: TGACCCAGTTACGGATTGCAAGCCCCCGCCTCCTGC...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCCTGGCAGGGATCTGTaGGCTGGCAAAGTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCPGRDL*AGKVQK
Trigger: TTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCCTGGCAGGGATCTGTaGGCTGGCAAAGTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: HPPPAYPTDIATELFKPQPGRDL*AGKVQK
Trigger: TTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS TCA 90 bp CTCATGTCTTGGCGCCACTGGGAGTTGAGTCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGCCCAGCAGCTGAATCTGTATTAAGA +
Preference number: 5 (lower is better)
Translates to: LMSWRHWELSLWVTR*MLRIRSPAAESVLR
Trigger: TCTTAATACAGATTCAGCTGCTGGGCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCAAGACATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS GCA 90 bp TTTAACAAATTCTCACTACCAGCCACTGAAGGGGTACCTAACACCTaGCCAAGAGGACGGACTACAGCATTTGCCACCTCTCGTCCAACG +
Preference number: 5 (lower is better)
Translates to: FNKFSLPATEGVPNT*PRGRTTAFATSRPT
Trigger: CGTTGGACGAGAGGTGGCAAATGCTGTAGTCCGTCCTCTTGGGCAGGTGTTAGGTACCCCTTCAGTGGCTGGTAGTGAGAATTTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGTGCCACCTTGAACAGTaGGTGGGGCCAGAAGTATGT +
Preference number: 5 (lower is better)
Translates to: HPPPAYPTDIATELFKPQCHLEQ*VGPEVC
Trigger: ACATACTTCTGGCCCCACCAACTGTTCAAGGTGGCA...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTCCAATAAGGAGGTGTaGGGAAGCACCGAGTACAAG +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLSNKEV*GSTEYK
Trigger: CTTGTACTCGGTGCTTCCCAACACCTCCTTATTGGA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTATCTATTCACGGGTGTaGGGGGAGCACTGTCTGATC +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCIYSRV*GEHCLI
Trigger: GATCAGACAGTGCTCCCCCAACACCCGTGAATAGAT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGGCGCCACTGGGAGTaGAGTCTTTGGGTGACGAGA +
Preference number: 5 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDWRHWE*SLWVTR
Trigger: TCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS TCA 90 bp GAGCTGGCCGACTACACTGATAAACAATGTAGGTGCACACAGAACTaGTGGCTCGCTTCCGGTCTCCTGAGTCAACCATCACTTTTACCT +
Preference number: 5 (lower is better)
Translates to: ELADYTDKQCRCTQN*WLASGLLSQPSLLP
Trigger: AGGTAAAAGTGATGGTTGACTCAGGAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACCTACATTGTTTATCAGTGTAGTCGGCCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGATCATTTGGGTGTTGTaGGGGTCCGTTTCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLIIWVL*GSVSVC
Trigger: GCAAACTGAAACGGACCCCAACAACACCCAAATGAT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGCTGGGAGTTGAGTCTTaGGGTGACGAGATGAATGCT +
Preference number: 5 (lower is better)
Translates to: HPPPAYPTDIATELFKPQLGVES*GDEMNA
Trigger: AGCATTCATCTCGTCACCCAAAGACTCAACTCCCAG...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCTGGGAGTTGAGTCTTaGGGTGACGAGATGAATGCT +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCLGVES*GDEMNA
Trigger: AGCATTCATCTCGTCACCCAAAGACTCAACTCCCAG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAGACTACAGAAACTCTaGTCTCAGGTCCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLRLQKL*SQVQGE
Trigger: CTCCCCTTGGACCTGAGACAAGAGTTTCTGTAGTCT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCCCTGGCAGGGATCTGTaGGCTGGCAAAGTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVPGRDL*AGKVQK
Trigger: TTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGG...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTCTTCCCACTCCCTCTTaGGGCAGATGTTATTGTGAG +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCLPTPS*GRCYCE
Trigger: CTCACAATAACATCTGCCCAAAGAGGGAGTGGGAAG...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS TCA 90 bp TCTCTCACTATCGGGAGTCGTGGGCTCCGTGCTTCCACCACTTGCTaGACTAATACCACTATTGGTGCGACTATGACTCTTCAGGTTATT +
Preference number: 5 (lower is better)
Translates to: SLTIGSRGLRASTTC*TNTTIGATMTLQVI
Trigger: AATAACCTGAAGAGTCATAGTCGCACCAATAGTGGTATTAGTTCAGCAAGTGGTGGAAGCACGGAGCCCACGACTCCCGATAGTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 90 bp TCATCAAGCATATCAGGGTGCTCTGTCAGCCAGACACAGAGACACTaGAAAGCTGCCACTATCATGGAGTGCAGATCCCTGGAGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SSSISGCSVSQTQRH*KAATIMECRSLECK
Trigger: TTTACACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS GCA 90 bp CCTTCACCATCATCACAACAATTAATAGACCAACTGGTAGAAACATaGCCAGTCCAACCAGGGTGTCTGCCCACATCTACTGACCAGCCA +
Preference number: 5 (lower is better)
Translates to: PSPSSQQLIDQLVET*PVQPGCLPTSTDQP
Trigger: TGGCTGGTCAGTAGATGTGGGCAGACACCCTGGTTGGACTGGGCATGTTTCTACCAGTTGGTCTATTAATTGTTGTGATGATGGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS CCA 90 bp CACAGAGACACTGAAAAGCTGCCACTATCATGGAGTGCAGATCCCTaGAGTGTAAAGGAGCTGGCCGACTACACTGATAAACAATGTAGG +
Preference number: 5 (lower is better)
Translates to: HRDTEKLPLSWSADP*SVKELADYTDKQCR
Trigger: CCTACATTGTTTATCAGTGTAGTCGGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS-3UTR CAA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCATCTATTCACGGGTGTaGGGGGAGCACTGTCTGATC +
Preference number: 5 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVIYSRV*GEHCLI
Trigger: GATCAGACAGTGCTCCCCCAACACCCGTGAATAGAT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTACCGGAAACTATGCTaGTTTATGGTTGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCYRKLC*FMVGSL
Trigger: CAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTACCGGAAACTATGCTaGTTTATGGTTGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLYRKLC*FMVGSL
Trigger: CAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGCAGGAGGCGGGGGCTaGCAATCCGTAACTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKAGGGG*QSVTGS
Trigger: TGACCCAGTTACGGATTGCAAGCCCCCGCCTCCTGC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGCAGGAGGCGGGGGCTaGCAATCCGTAACTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSAGGGG*QSVTGS
Trigger: TGACCCAGTTACGGATTGCAAGCCCCCGCCTCCTGC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAAAAAGGCGGGCTGTTaGGAATTCCTGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSKKAGC*EFLGRR
Trigger: CCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTTT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGAGGTAGACGACTATTaGCAGGTTCCTTCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: HPPPAYPTDIATELFKPQEVDDY*QVPSVL
Trigger: AAGCACTGAAGGAACCTGCAAATAGTCGTCTACCTC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTGCTTGTTCCGGTACTaGTTGACAATGTCGGTGATT +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLCLFRY*LTMSVI
Trigger: AATCACCGACATTGTCAACAAGTACCGGAACAAGCA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCCACAAAACACATCTTaGAGCAAGGCTAACTTCCAC +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLPQNTS*SKANFH
Trigger: GTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTGG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGGGAAATCACTTCTTCTaGTTGAGATCCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRGNHFF*LRSFTI
Trigger: GATGGTGAAGGATCTCAACAAGAAGAAGTGATTTCC...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397042.7
ENST00000632792.1
CDS CCA 90 bp CCCACATATAGCCTAAGATTAGTAAAGGGACCTGTTGCTTGGCAGTaGTCTGAGAAAAGCCAAGGGGTCAGTGTGCTCAGAATCTGCTTT +
Preference number: 5 (lower is better)
Translates to: PTYSLRLVKGPVAWQ*SEKSQGVSVLRICF
Trigger: AAAGCAGATTCTGAGCACACTGACCCCTTGGCTTTTCTCAGACCACTGCCAAGCAACAGGTCCCTTTACTAATCTTAGGCTATATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490114.1
CDS-3UTR CAA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGAACCCTGTTCCTGTCTaGGTACAAAAAGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRNPVPV*VQKDSV
Trigger: TACAGAATCTTTTTGTACCAAGACAGGAACAGGGTT...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGCCACCTTGAACAGTaGGTGGGGCCAGAAGTATGT +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSCHLEQ*VGPEVC
Trigger: ACATACTTCTGGCCCCACCAACTGTTCAAGGTGGCA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTGGCGCCACTGGGAGTaGAGTCTTTGGGTGACGAGA +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLWRHWE*SLWVTR
Trigger: TCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATCCATCACTTTTACCTTaGCAAGGCCAGAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDPSLLP*QGQRGA
Trigger: AGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATGG...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGCAGGAGGCGGGGGCTaGCAATCCGTAACTGGGTCA +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNAGGGG*QSVTGS
Trigger: TGACCCAGTTACGGATTGCAAGCCCCCGCCTCCTGC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATAAAAAGGCGGGCTGTTaGGAATTCCTGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHKKAGC*EFLGRR
Trigger: CCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTTT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTCTGGCTCCAGCTGCTaGTTCCGGTACTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHSGSSC*FRYLLT
Trigger: TGTCAACAAGTACCGGAACAAGCAGCTGGAGCCAGA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTCAGGCAAAGGTGTGGGTACTaGTATTCATCAATGAATCCA +
Preference number: 5 (lower is better)
Translates to: GYPIFHWLRTHWEFHAFRQRCGY*YSSMNP
Trigger: TGGATTCATTGATGAATACAAGTACCCACACCTTTG...CCTGAAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS TCA 90 bp GTGCTTCCACCACTTGCTGAACTAATACCACTATTGGTGCGACTATaGCTCTTCAGGTTATTTTCTCCACCACCCATCTCCATCTGGCAA +
Preference number: 5 (lower is better)
Translates to: VLPPLAELIPLLVRL*LFRLFSPPPISIWQ
Trigger: TTGCCAGATGGAGATGGGTGGTGGAGAAAATAACCTGAAGAGTCATAGTCGCACCAATAGTGGTATTAGTTCAGCAAGTGGTGGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS GCA 90 bp GAGTTGTTTGGGGCTTCATTACCATGCAGTGTGCTTCTGGCTTCCTaGCACCCTAATCAACTCTTAAGTTTCACTGCAAGGTTAACAGGA +
Preference number: 5 (lower is better)
Translates to: ELFGASLPCSVLLAS*HPNQLLSFTARLTG
Trigger: TCCTGTTAACCTTGCAGTGAAACTTAAGAGTTGATTAGGGTGGCAGGAAGCCAGAAGCACACTGCATGGTAATGAAGCCCCAAACAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTCCAATAAGGAGGTGTaGGGAAGCACCGAGTACAAG +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSSNKEV*GSTEYK
Trigger: CTTGTACTCGGTGCTTCCCAACACCTCCTTATTGGA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATAGTGCACAAATGACCTaGCTCCACTGCTCCACCACT +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHSAQMT*LHCSTT
Trigger: AGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGATACTGATTCAATTCTaGCGGCATTCCGCTCACATT +
Preference number: 5 (lower is better)
Translates to: HPPPAYPTDIATELFKPQILIQF*RHSAHI
Trigger: AATGTGAGCGGAATGCCGCAAGAATTGAATCAGTAT...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATATCTATTCACGGGTGTaGGGGGAGCACTGTCTGATC +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHIYSRV*GEHCLI
Trigger: GATCAGACAGTGCTCCCCCAACACCCGTGAATAGAT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAAACTCCATGCTAGCTaGTGTTGTAATGGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCKLHAS*CCNGSH
Trigger: ATGACTGCCATTACAACACAAGCTAGCATGGAGTTT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTAATATCATTTGGGTGTaGTTGGGGTCCGTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLNIIWV*LGSVSV
Trigger: AACTGAAACGGACCCCAACAACACCCAAATGATATT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCTGGGAGTTGAGTCTTaGGGTGACGAGATGAATGCT +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSLGVES*GDEMNA
Trigger: AGCATTCATCTCGTCACCCAAAGACTCAACTCCCAG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGTGGCGCCACTGGGAGTaGAGTCTTTGGGTGACGAGA +
Preference number: 5 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGWRHWE*SLWVTR
Trigger: TCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCA...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATGGCGCCACTGGGAGTaGAGTCTTTGGGTGACGAGA +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSWRHWE*SLWVTR
Trigger: TCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTCCATCACTTTTACCTTaGCAAGGCCAGAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSPSLLP*QGQRGA
Trigger: AGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATGG...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTTGACCTCTTGCTCATaGTTCTTGGACTTACTTCCT +
Preference number: 5 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLTSCS*FLDLLP
Trigger: AGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTTGACCTCTTGCTCATaGTTCTTGGACTTACTTCCT +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCLTSCS*FLDLLP
Trigger: AGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGTTTGTACTTGACCTCTaGCTCATTGTTCTTGGACTT +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLFVLDL*LIVLGL
Trigger: AAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAA...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTACCGGAAACTATGCTaGTTTATGGTTGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDYRKLC*FMVGSL
Trigger: CAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTA...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTTCCTCCTCACTCTGTaGCTCAAGGTGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCFLLTL*LKVYFI
Trigger: TATGAAATACACCTTGAGCAACAGAGTGAGGAGGAA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATGAGGTAGACGACTATTaGCAGGTTCCTTCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDEVDDY*QVPSVL
Trigger: AAGCACTGAAGGAACCTGCAAATAGTCGTCTACCTC...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGACCTTCTTCTGTCCATaGAAAATGCTAGCTCCAATA +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLTFFCP*KMLAPI
Trigger: TATTGGAGCTAGCATTTTCAATGGACAGAAGAAGGT...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAGACTACAGAAACTCTaGTCTCAGGTCCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSRLQKL*SQVQGE
Trigger: CTCCCCTTGGACCTGAGACAAGAGTTTCTGTAGTCT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTTTGTTCCGGTACTTGTaGACAATGTCGGTGATTTTC +
Preference number: 5 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLLFRYL*TMSVIF
Trigger: GAAAATCACCGACATTGTCAACAAGTACCGGAACAA...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTGGAATAAGAGACATTaGCACAGGGAATTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCWNKRH*HRELGL
Trigger: GAGACCTAATTCCCTGTGCAAATGTCTCTTATTCCA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCACTTCCCACTCCCTCTTaGGGCAGATGTTATTGTGAG +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSLPTPS*GRCYCE
Trigger: CTCACAATAACATCTGCCCAAAGAGGGAGTGGGAAG...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CATCCACCCCCGGCATACCCAACAGATATAGCAACTGAACTGTTTAAGCCACAGGAGGAGAAAGATGTCTaGGTCACTATAAGAGATGAG +
Preference number: 5 (lower is better)
Translates to: HPPPAYPTDIATELFKPQEEKDV*VTIRDE
Trigger: CTCATCTCTTATAGTGACCAAGACATCTTTCTCCTC...CTGTGGCTTAAACAGTTCAGTTGCTATATCTGTTGGGTATGCCGGGGGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS TCA 90 bp CAGCACACTGGTATGGCCTTGATCATTCTGAATCACCAAATGCAGTaGCCTCCACTCAGAGTACATCGTGCCACTAAAGTACAATCCAAA +
Preference number: 5 (lower is better)
Translates to: QHTGMALIILNHQMQ*PPLRVHRATKVQSK
Trigger: TTTGGATTGTACTTTAGTGGCACGATGTACTCTGAGTGGAGGTCACTGCATTTGGTGATTCAGAATGATCAAGGCCATACCAGTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS TCA 90 bp TGCATCAAACATAGGATTGGAAACCATGGTGTCTGTGGACATTTGTaGCCCTTTCCGTCGAAACTCCATGCTAGCTTGTGTTGTAATGGC +
Preference number: 5 (lower is better)
Translates to: CIKHRIGNHGVCGHL*PFPSKLHASLCCNG
Trigger: GCCATTACAACACAAGCTAGCATGGAGTTTCGACGGAAAGGGTCACAAATGTCCACAGACACCATGGTTTCCAATCCTATGTTTGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
CDS TCA 90 bp CTGGAACTGGGACTGAGCCTCTGTGAGGAATTAAGATTGTCTGTATaGTTGGGGAAAAGCTCAAGTGTCAGGGATGGCTGTTTCAGAATT +
Preference number: 5 (lower is better)
Translates to: LELGLSLCEELRLSV*LGKSSSVRDGCFRI
Trigger: AATTCTGAAACAGCCATCCCTGACACTTGAGCTTTTCCCCAATCATACAGACAATCTTAATTCCTCACAGAGGCTCAGTCCCAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS TCA 90 bp AGTGGTCTAAGAACTGCAGTTCTTGAGTCCAACCTCCTGGAAAAGTaGAGTATAAAACTCTGGCTCCAGCTGCTTGTTCCGGTACTTGTT +
Preference number: 5 (lower is better)
Translates to: SGLRTAVLESNLLEK*SIKLWLQLLVPVLV
Trigger: AACAAGTACCGGAACAAGCAGCTGGAGCCAGAGTTTTATACTTCACTTTTCCAGGAGGTTGGACTCAAGAACTGCAGTTCTTAGACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461147.1
ENST00000632792.1
CDS-3UTR CAA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTCACACTGGTATGGCCTaGATCATTCTGAATCACCAA +
Preference number: 5 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAHTGMA*IILNHQ
Trigger: TTGGTGATTCAGAATGATCAAGGCCATACCAGTGTG...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTAACCCTGTTCCTGTCTaGGTACAAAAAGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCNPVPV*VQKDSV
Trigger: TACAGAATCTTTTTGTACCAAGACAGGAACAGGGTT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTGCCACCTTGAACAGTaGGTGGGGCCAGAAGTATGT +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLCHLEQ*VGPEVC
Trigger: ACATACTTCTGGCCCCACCAACTGTTCAAGGTGGCA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCTCAGCAATGCCACCTaGAACAGTTGGTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVLSNAT*NSWWGQ
Trigger: CTGGCCCCACCAACTGTTCAAGGTGGCATTGCTGAG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCTCAGCAATGCCACCTaGAACAGTTGGTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLSNAT*NSWWGQ
Trigger: CTGGCCCCACCAACTGTTCAAGGTGGCATTGCTGAG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAATCATTTGGGTGTTGTaGGGGTCCGTTTCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSIIWVL*GSVSVC
Trigger: GCAAACTGAAACGGACCCCAACAACACCCAAATGAT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATGCTTCTGATTTGCTTTaGCTCCTCTGGGTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDASDLL*LLWVKD
Trigger: GTCTTTTACCCAGAGGAGCAAAAGCAAATCAGAAGC...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAAAAAAGGCGGGCTGTTaGGAATTCCTGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKKKAGC*EFLGRR
Trigger: CCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTTT...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAAAAAGGCGGGCTGTTaGGAATTCCTGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSKKAGC*EFLGRR
Trigger: CCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTTT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAAAAAGGCGGGCTGTTaGGAATTCCTGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVKKAGC*EFLGRR
Trigger: CCTCCTGCCCAGGAATTCCAAACAGCCCGCCTTTTT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATGAGGTAGACGACTATTaGCAGGTTCCTTCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHEVDDY*QVPSVL
Trigger: AAGCACTGAAGGAACCTGCAAATAGTCGTCTACCTC...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTGAGGTAGACGACTATTaGCAGGTTCCTTCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSEVDDY*QVPSVL
Trigger: AAGCACTGAAGGAACCTGCAAATAGTCGTCTACCTC...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTATGGGTATCCCATATTCCACTGGCTCCGTACACACTGGGAGTTTCATGCCTTACCTTCTTCTGTCCATaGAAAATGCTAGCTCCAATA +
Preference number: 5 (lower is better)
Translates to: VWVSHIPLAPYTLGVSCLTFFCP*KMLAPI
Trigger: TATTGGAGCTAGCATTTTCAATGGACAGAAGAAGGT...AAGGCATGAAACTCCCAGTGTGTACGGAGCCAGTGGAATATGGGATACCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTACCTTCTTCTGTCCATaGAAAATGCTAGCTCCAATA +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCTFFCP*KMLAPI
Trigger: TATTGGAGCTAGCATTTTCAATGGACAGAAGAAGGT...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCTGCTTGTTCCGGTACTaGTTGACAATGTCGGTGATT +
Preference number: 5 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVCLFRY*LTMSVI
Trigger: AATCACCGACATTGTCAACAAGTACCGGAACAAGCA...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GTCATTATGTCACCCCGCTGGACAATAATGGAGAGAGTGGGGTATCACTGCTGTTGGAATTACAAGGAGTaGCCAGAATTTAGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: VIMSPRWTIMERVGYHCCWNYKE*PEFRAN
Trigger: GTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCA...ACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TGTGAGCAGAAGGAACCAGCGCCTGGTAAGGTATGGGTATCCCATATTCCACTGCATGTATCAAATACATaGGAATTACAAGGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: CEQKEPAPGKVWVSHIPLHVSNT*ELQGVA
Trigger: GGCAACTCCTTGTAATTCCAATGTATTTGATACATG...CAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS TCA 90 bp TCCTTTGTACTTGACCTCTTGCTCATTGTTCTTGGACTTACTTCCTaGGATACCCAGTTCCACAATCTCCAGTACTTCCTTAAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SFVLDLLLIVLGLTS*DTQFHNLQYFLKAV
Trigger: GACTGCCTTAAGGAAGTACTGGAGATTGTGGAACTGGGTATCTCAGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS GCA 90 bp CTCATCAGTAGAAAGAAAAACGAGTTGTTTGGGGCTTCATTACCATaGAGTGTGCTTCTGGCTTCCTGCCACCCTAATCAACTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: LISRKKNELFGASLP*SVLLASCHPNQLLS
Trigger: ACTTAAGAGTTGATTAGGGTGGCAGGAAGCCAGAAGCACACTGCATGGTAATGAAGCCCCAAACAACTCGTTTTTCTTTCTACTGATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCATGCCACCTTGAACAGTaGGTGGGGCCAGAAGTATGT +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSCHLEQ*VGPEVC
Trigger: ACATACTTCTGGCCCCACCAACTGTTCAAGGTGGCA...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTCCAATAAGGAGGTGTaGGGAAGCACCGAGTACAAG +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLSNKEV*GSTEYK
Trigger: CTTGTACTCGGTGCTTCCCAACACCTCCTTATTGGA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGAGTGCACAAATGACCTaGCTCCACTGCTCCACCACT +
Preference number: 5 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGSAQMT*LHCSTT
Trigger: AGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACT...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAGTGCACAAATGACCTaGCTCCACTGCTCCACCACT +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSSAQMT*LHCSTT
Trigger: AGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp TCCTTCCCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATATACTGATTCAATTCTaGCGGCATTCCGCTCACATT +
Preference number: 5 (lower is better)
Translates to: SFPGRRGSLPDHKCIQHDILIQF*RHSAHI
Trigger: AATGTGAGCGGAATGCCGCAAGAATTGAATCAGTAT...ATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAATCTATTCACGGGTGTaGGGGGAGCACTGTCTGATC +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSIYSRV*GEHCLI
Trigger: GATCAGACAGTGCTCCCCCAACACCCGTGAATAGAT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATATCATTTGGGTGTTGTaGGGGTCCGTTTCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHIIWVL*GSVSVC
Trigger: GCAAACTGAAACGGACCCCAACAACACCCAAATGAT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTCCATCACTTTTACCTTaGCAAGGCCAGAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLPSLLP*QGQRGA
Trigger: AGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATGG...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCCATCACTTTTACCTTaGCAAGGCCAGAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLPSLLP*QGQRGA
Trigger: AGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATGG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTTCCTCCTCACTCTGTaGCTCAAGGTGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAFLLTL*LKVYFI
Trigger: TATGAAATACACCTTGAGCAACAGAGTGAGGAGGAA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGCTTGTTCCGGTACTaGTTGACAATGTCGGTGATT +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSCLFRY*LTMSVI
Trigger: AATCACCGACATTGTCAACAAGTACCGGAACAAGCA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAATCTGGCTCCAGCTGCTaGTTCCGGTACTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKSGSSC*FRYLLT
Trigger: TGTCAACAAGTACCGGAACAAGCAGCTGGAGCCAGA...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCTGGCTCCAGCTGCTaGTTCCGGTACTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSGSSC*FRYLLT
Trigger: TGTCAACAAGTACCGGAACAAGCAGCTGGAGCCAGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCACAAACTACTGCAGTTaGCTGCTTGGTCCTGAAATA +
Preference number: 5 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVTNYCS*LLGPEI
Trigger: TATTTCAGGACCAAGCAGCAAACTGCAGTAGTTTGT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCGGTGGTCACTCATGTTaGTCAATTATGAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVGGHSC*SIMRKS
Trigger: GGATTTCCTCATAATTGACAAACATGAGTGACCACC...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCCTGGCAGGGATCTGTaGGCTGGCAAAGTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVPGRDL*AGKVQK
Trigger: TTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AGTAGCAGCGAGGTAATAGAAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTTGGAATAAGAGACATTaGCACAGGGAATTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: SSSEVIEVFPKPGRDLLAWNKRH*HRELGL
Trigger: GAGACCTAATTCCCTGTGCAAATGTCTCTTATTCCA...AGCCAACAGATCCCTGCCAGGTTTTGGAAATACTTCTATTACCTCGCTGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTCTTCCCACTCCCTCTTaGGGCAGATGTTATTGTGAG +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLLPTPS*GRCYCE
Trigger: CTCACAATAACATCTGCCCAAAGAGGGAGTGGGAAG...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCACACTGGTATGGCCTaGATCATTCTGAATCACCAA +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHHTGMA*IILNHQ
Trigger: TTGGTGATTCAGAATGATCAAGGCCATACCAGTGTG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTACACACTGGTATGGCCTaGATCATTCTGAATCACCAA +
Preference number: 5 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLHTGMA*IILNHQ
Trigger: TTGGTGATTCAGAATGATCAAGGCCATACCAGTGTG...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTCCAATAAGGAGGTGTaGGGAAGCACCGAGTACAAG +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVSNKEV*GSTEYK
Trigger: CTTGTACTCGGTGCTTCCCAACACCTCCTTATTGGA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCAAAACTCCATGCTAGCTaGTGTTGTAATGGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSKLHAS*CCNGSH
Trigger: ATGACTGCCATTACAACACAAGCTAGCATGGAGTTT...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAGCATCAAACATAGGATaGGAAACCATGGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLASNIG*ETMVSV
Trigger: CACAGACACCATGGTTTCCAATCCTATGTTTGATGC...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTATCATTTGGGTGTTGTaGGGGTCCGTTTCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLIIWVL*GSVSVC
Trigger: GCAAACTGAAACGGACCCCAACAACACCCAAATGAT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTAATATCATTTGGGTGTaGTTGGGGTCCGTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSNIIWV*LGSVSV
Trigger: AACTGAAACGGACCCCAACAACACCCAAATGATATT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACCATCACTTTTACCTTaGCAAGGCCAGAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSPSLLP*QGQRGA
Trigger: AGCTCCTCTCTGGCCTTGCAAAGGTAAAAGTGATGG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATTGACCTCTTGCTCATaGTTCTTGGACTTACTTCCT +
Preference number: 5 (lower is better)
Translates to: PGRRGSLPDHKCIQHDCSLTSCS*FLDLLP
Trigger: AGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAA...TGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTTGACCTCTTGCTCATaGTTCTTGGACTTACTTCCT +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSLTSCS*FLDLLP
Trigger: AGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTACCGGAAACTATGCTaGTTTATGGTTGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLYRKLC*FMVGSL
Trigger: CAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATGCTTCTGATTTGCTTTaGCTCCTCTGGGTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHASDLL*LLWVKD
Trigger: GTCTTTTACCCAGAGGAGCAAAAGCAAATCAGAAGC...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATTTCCTCCTCACTCTGTaGCTCAAGGTGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHFLLTL*LKVYFI
Trigger: TATGAAATACACCTTGAGCAACAGAGTGAGGAGGAA...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTTTCCTCCTCACTCTGTaGCTCAAGGTGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSFLLTL*LKVYFI
Trigger: TATGAAATACACCTTGAGCAACAGAGTGAGGAGGAA...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATGGAAATCACTTCTTGTaGAGATCCTTCACCATCATC +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHGNHFL*RSFTII
Trigger: GATGATGGTGAAGGATCTCAACAAGAAGTGATTTCC...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397040.5
CDS-3UTR CAA 90 bp ACAACAGCCATTTCTAACAGTAGCCACCCAAAGAGGTGGTCACTCATGTTTGTCACCTTCTTCTGTCCATaGAAAATGCTAGCTCCAATA +
Preference number: 5 (lower is better)
Translates to: TTAISNSSHPKRWSLMFVTFFCP*KMLAPI
Trigger: TATTGGAGCTAGCATTTTCAATGGACAGAAGAAGGT...GACAAACATGAGTGACCACCTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAGACTACAGAAACTCTaGTCTCAGGTCCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSRLQKL*SQVQGE
Trigger: CTCCCCTTGGACCTGAGACAAGAGTTTCTGTAGTCT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCTGGCTCCAGCTGCTaGTTCCGGTACTTGTTGACA +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNSGSSC*FRYLLT
Trigger: TGTCAACAAGTACCGGAACAAGCAGCTGGAGCCAGA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTACAAACTACTGCAGTTaGCTGCTTGGTCCTGAAATA +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSTNYCS*LLGPEI
Trigger: TATTTCAGGACCAAGCAGCAAACTGCAGTAGTTTGT...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATGGTGGTCACTCATGTTaGTCAATTATGAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHGGHSC*SIMRKS
Trigger: GGATTTCCTCATAATTGACAAACATGAGTGACCACC...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATGAGGAGAAAGATGTCTaGGTCACTATAAGAGATGAG +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHEEKDV*VTIRDE
Trigger: CTCATCTCTTATAGTGACCAAGACATCTTTCTCCTC...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp ATGAGCAGTGTATACTGTAGCACTGTAACAGGAATCCTTGGATGTTCTGGGTCTGAGGAGAAAGATGTCTaGGTCACTATAAGAGATGAG +
Preference number: 5 (lower is better)
Translates to: MSSVYCSTVTGILGCSGSEEKDV*VTIRDE
Trigger: CTCATCTCTTATAGTGACCAAGACATCTTTCTCCTC...AGACCCAGAACATCCAAGGATTCCTGTTACAGTGCTACAGTATACACTGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATGGAAATCACTTCTTCTaGTTGAGATCCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHGNHFF*LRSFTI
Trigger: GATGGTGAAGGATCTCAACAAGAAGAAGTGATTTCC...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397042.7
ENST00000632792.1
CDS TCA 90 bp AGAGCTCCTGTGATTAGGTCAGGTCTACTTGGAAAATCTCCCTTTTaGTTAACTCAAAGTAACCCAATTAAACCCACAGGATCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: RAPVIRSGLLGKSPF*LTQSNPIKPTGSLC
Trigger: GCAAAGGGATCCTGTGGGTTTAATTGGGTTACTTTGAGTTAATCAAAAGGGAGATTTTCCAAGTAGACCTGACCTAATCACAGGAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS TCA 90 bp ACTTACTCTGCTCATTTCCAAGAGGTTGTTCCAGCATTGCCAGGATaGCACTGTTATCCAAGACAAAGTACCGGAAACTATGCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: TYSAHFQEVVPALPG*HCYPRQSTGNYACL
Trigger: TAAACAAGCATAGTTTCCGGTACTTTGTCTTGGATAACAGTGTCATCCTGGCAATGCTGGAACAACCTCTTGGAAATGAGCAGAGTAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS GCA 90 bp ATTGCCAGGATGACACTGTTATCCAAGACAAAGTACCGGAAACTATaGTTGTTTATGGTTGGCAGCCTGGAGTATTTAATCAAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: IARMTLLSKTKYRKL*LFMVGSLEYLIKVV
Trigger: GACCACTTTGATTAAATACTCCAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTACTTTGTCTTGGATAACAGTGTCATCCTGGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGCATCAAACATAGGATaGGAAACCATGGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLASNIG*ETMVSV
Trigger: CACAGACACCATGGTTTCCAATCCTATGTTTGATGC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATAATATCATTTGGGTGTaGTTGGGGTCCGTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHNIIWV*LGSVSV
Trigger: AACTGAAACGGACCCCAACAACACCCAAATGATATT...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATCTGGGAGTTGAGTCTTaGGGTGACGAGATGAATGCT +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLGVES*GDEMNA
Trigger: AGCATTCATCTCGTCACCCAAAGACTCAACTCCCAG...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGCTTCTGATTTGCTTTaGCTCCTCTGGGTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLASDLL*LLWVKD
Trigger: GTCTTTTACCCAGAGGAGCAAAAGCAAATCAGAAGC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGAGGTAGACGACTATTaGCAGGTTCCTTCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSEVDDY*QVPSVL
Trigger: AAGCACTGAAGGAACCTGCAAATAGTCGTCTACCTC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTAGACTACAGAAACTCTaGTCTCAGGTCCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVRLQKL*SQVQGE
Trigger: CTCCCCTTGGACCTGAGACAAGAGTTTCTGTAGTCT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAGACTACAGAAACTCTaGTCTCAGGTCCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNRLQKL*SQVQGE
Trigger: CTCCCCTTGGACCTGAGACAAGAGTTTCTGTAGTCT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATTGTTCCGGTACTTGTaGACAATGTCGGTGATTTTC +
Preference number: 5 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLLFRYL*TMSVIF
Trigger: GAAAATCACCGACATTGTCAACAAGTACCGGAACAA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATCAAAGGTGTGGGTACTaGTATTCATCAATGAATCCA +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHQRCGY*YSSMNP
Trigger: TGGATTCATTGATGAATACAAGTACCCACACCTTTG...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTAGAGGACTTGGGAAACTaGGTTTGCTTCAACAAGTAT +
Preference number: 5 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLEDLGN*VCFNKY
Trigger: ATACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCTC...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAGTATTTCCAAAACCTGGCAGGGATCTGTTGGCTGGCAAAGTCCAGAAAACATAATCACTTCTTCTTGTaGAGATCCTTCACCATCATC +
Preference number: 5 (lower is better)
Translates to: KYFQNLAGICWLAKSRKHNHFFL*RSFTII
Trigger: GATGATGGTGAAGGATCTCAACAAGAAGAAGTGATT...ATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTTGGAAATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397042.7
ENST00000632792.1
CDS TCA 90 bp CCCATCTCCATCTGGCAACCAATGGCTTCCAAAAGTGCTGAATCTTaGACAATATTTAACATTGCCCCTAATATCATTTGGGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PISIWQPMASKSAES*TIFNIAPNIIWVLL
Trigger: CAACAACACCCAAATGATATTAGGGGCAATGTTAAATATTGTTCAAGATTCAGCACTTTTGGAAGCCATTGGTTGCCAGATGGAGATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 90 bp AATCATTCTGCTCATTTCCAAGAGGTTGTTCCAGCATTGCCAGGATaGCACTGTTATCCAAGACAAAGTACCGGAAACTATGCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: NHSAHFQEVVPALPG*HCYPRQSTGNYACL
Trigger: TAAACAAGCATAGTTTCCGGTACTTTGTCTTGGATAACAGTGTCATCCTGGCAATGCTGGAACAACCTCTTGGAAATGAGCAGAATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CTATATGCAAGGCACTGTGGAATCCCAAATTATACCTTTTCCCTCACCATTAAAGCATCAAACATAGGATaGGAAACCATGGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LYARHCGIPNYTFSLTIKASNIG*ETMVSV
Trigger: CACAGACACCATGGTTTCCAATCCTATGTTTGATGC...TTTAATGGTGAGGGAAAAGGTATAATTTGGGATTCCACAGTGCCTTGCATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGCATCAAACATAGGATaGGAAACCATGGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSASNIG*ETMVSV
Trigger: CACAGACACCATGGTTTCCAATCCTATGTTTGATGC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTATCATTTGGGTGTTGTaGGGGTCCGTTTCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVIIWVL*GSVSVC
Trigger: GCAAACTGAAACGGACCCCAACAACACCCAAATGAT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGGACAAAGGATCGGCATAAATACAAACAAACCTCTGGACCTTCTTCCCTATTTGTACTTGACCTCTaGCTCATTGTTCTTGGACTT +
Preference number: 5 (lower is better)
Translates to: FWTKDRHKYKQTSGPSSLFVLDL*LIVLGL
Trigger: AAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAA...TAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGCTTCTGATTTGCTTTaGCTCCTCTGGGTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSASDLL*LLWVKD
Trigger: GTCTTTTACCCAGAGGAGCAAAAGCAAATCAGAAGC...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTTGTTCCGGTACTTGTaGACAATGTCGGTGATTTTC +
Preference number: 5 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLLFRYL*TMSVIF
Trigger: GAAAATCACCGACATTGTCAACAAGTACCGGAACAA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTGCTTGTTCCGGTACTaGTTGACAATGTCGGTGATT +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVCLFRY*LTMSVI
Trigger: AATCACCGACATTGTCAACAAGTACCGGAACAAGCA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTACAAACTACTGCAGTTaGCTGCTTGGTCCTGAAATA +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLTNYCS*LLGPEI
Trigger: TATTTCAGGACCAAGCAGCAAACTGCAGTAGTTTGT...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTTGGAATAAGAGACATTaGCACAGGGAATTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: SCKHSNQFFSGRENLNGLWNKRH*HRELGL
Trigger: GAGACCTAATTCCCTGTGCAAATGTCTCTTATTCCA...AAGCCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTGGAATAAGAGACATTaGCACAGGGAATTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLWNKRH*HRELGL
Trigger: GAGACCTAATTCCCTGTGCAAATGTCTCTTATTCCA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCCACAAAACACATCTTaGAGCAAGGCTAACTTCCAC +
Preference number: 5 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGPQNTS*SKANFH
Trigger: GTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTGG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGCCACAAAACACATCTTaGAGCAAGGCTAACTTCCAC +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVPQNTS*SKANFH
Trigger: GTGGAAGTTAGCCTTGCTCAAAGATGTGTTTTGTGG...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGAGGACTTGGGAAACTaGGTTTGCTTCAACAAGTAT +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLEDLGN*VCFNKY
Trigger: ATACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCTC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTGGAAATCACTTCTTCTaGTTGAGATCCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLGNHFF*LRSFTI
Trigger: GATGGTGAAGGATCTCAACAAGAAGAAGTGATTTCC...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS CCA 90 bp ACTGTTATCCAAGACAAAGTACCGGAAACTATGCTTGTTTATGGTTaGCAGCCTGGAGTATTTAATCAAAGTGGTCTCATTCACAAGACT +
Preference number: 5 (lower is better)
Translates to: TVIQDKVPETMLVYG*QPGVFNQSGLIHKT
Trigger: AGTCTTGTGAATGAGACCACTTTGATTAAATACTCCAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTACTTTGTCTTGGATAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAATACTGATTCAATTCTaGCGGCATTCCGCTCACATT +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSILIQF*RHSAHI
Trigger: AATGTGAGCGGAATGCCGCAAGAATTGAATCAGTAT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGATACTGATTCAATTCTaGCGGCATTCCGCTCACATT +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVILIQF*RHSAHI
Trigger: AATGTGAGCGGAATGCCGCAAGAATTGAATCAGTAT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAAACTCCATGCTAGCTaGTGTTGTAATGGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVKLHAS*CCNGSH
Trigger: ATGACTGCCATTACAACACAAGCTAGCATGGAGTTT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAATATCATTTGGGTGTaGTTGGGGTCCGTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVNIIWV*LGSVSV
Trigger: AACTGAAACGGACCCCAACAACACCCAAATGATATT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAGAGGAAATCACTTCTaGTTGAGATCCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSRGNHF*LRSFTI
Trigger: GATGGTGAAGGATCTCAACAAGAAGTGATTTCCTCT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397040.5
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTTGTTCCGGTACTTGTaGACAATGTCGGTGATTTTC +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVLFRYL*TMSVIF
Trigger: GAAAATCACCGACATTGTCAACAAGTACCGGAACAA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTGCTTGTTCCGGTACTaGTTGACAATGTCGGTGATT +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNCLFRY*LTMSVI
Trigger: AATCACCGACATTGTCAACAAGTACCGGAACAAGCA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGACAAACTACTGCAGTTaGCTGCTTGGTCCTGAAATA +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVTNYCS*LLGPEI
Trigger: TATTTCAGGACCAAGCAGCAAACTGCAGTAGTTTGT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGGGTGGTCACTCATGTTaGTCAATTATGAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGGGHSC*SIMRKS
Trigger: GGATTTCCTCATAATTGACAAACATGAGTGACCACC...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CCTATCAAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTTGGAATTACAAGGAGTaGCCAGAATTTAGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: PIKLFCCVIVPKLEFNSLWNYKE*PEFRAN
Trigger: GTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCA...AAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGGAAGACGAGGAAGTCTCCCAGATCACAAATGCATTCAACATGATTGTTCATCTTGGGAAACTTGGTTaGCTTCAACAAGTATTTACT +
Preference number: 5 (lower is better)
Translates to: LEDEEVSQITNAFNMIVHLGKLG*LQQVFT
Trigger: AGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAAG...ATGAACAATCATGTTGAATGCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CCA 90 bp GTCTGTATATACATCAACGCAATATTTTACAGTCTCTCCATCCAATaGAAGGGTCAGTCCATAGCAAATTACTTCCATGGTCCATTTTAC +
Preference number: 5 (lower is better)
Translates to: VCIYINAIFYSLSIQ*KGQSIANYFHGPFY
Trigger: GTAAAATGGACCATGGAAGTAATTTGCTATGGACTGACCCTTCCATTGGATGGAGAGACTGTAAAATATTGCGTTGATGTATATACAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CCA 90 bp AAATGTCCAGACCAAGAGATTTCTCCCAAACTAGTGACAAACATCTaGCCATATTCACAGACTACTTTCTTAGTATCAAGGTCCCTATTT +
Preference number: 5 (lower is better)
Translates to: KCPDQEISPKLVTNI*PYSQTTFLVSRSLF
Trigger: AAATAGGGACCTTGATACTAAGAAAGTAGTCTGTGAATATGGCCAGATGTTTGTCACTAGTTTGGGAGAAATCTCTTGGTCTGGACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTAATATCATTTGGGTGTaGTTGGGGTCCGTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVNIIWV*LGSVSV
Trigger: AACTGAAACGGACCCCAACAACACCCAAATGATATT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTGACCTCTTGCTCATaGTTCTTGGACTTACTTCCT +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNLTSCS*FLDLLP
Trigger: AGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTTTGTACTTGACCTCTaGCTCATTGTTCTTGGACTT +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVFVLDL*LIVLGL
Trigger: AAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTCCTCCTCACTCTGTaGCTCAAGGTGTATTTCATA +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNFLLTL*LKVYFI
Trigger: TATGAAATACACCTTGAGCAACAGAGTGAGGAGGAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGGAAATCACTTCTTGTaGAGATCCTTCACCATCATC +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNGNHFL*RSFTII
Trigger: GATGATGGTGAAGGATCTCAACAAGAAGTGATTTCC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397040.5
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATAGAGGAAATCACTTCTaGTTGAGATCCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNRGNHF*LRSFTI
Trigger: GATGGTGAAGGATCTCAACAAGAAGTGATTTCCTCT...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397040.5
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGACCTTCTTCTGTCCATaGAAAATGCTAGCTCCAATA +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVTFFCP*KMLAPI
Trigger: TATTGGAGCTAGCATTTTCAATGGACAGAAGAAGGT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTTTGTTCCGGTACTTGTaGACAATGTCGGTGATTTTC +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVLFRYL*TMSVIF
Trigger: GAAAATCACCGACATTGTCAACAAGTACCGGAACAA...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATGGTGGTCACTCATGTTaGTCAATTATGAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNGGHSC*SIMRKS
Trigger: GGATTTCCTCATAATTGACAAACATGAGTGACCACC...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGTGGAATTACAAGGAGTaGCCAGAATTTAGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVWNYKE*PEFRAN
Trigger: GTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCA...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAAATCACTTCTTCTTGTaGAGATCCTTCACCATCATC +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSNHFFL*RSFTII
Trigger: GATGATGGTGAAGGATCTCAACAAGAAGAAGTGATT...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp TTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCAGTGAATCACTTCTTCTTGTaGAGATCCTTCACCATCATC +
Preference number: 5 (lower is better)
Translates to: FCCVIVPKLEFNSLRNSVNHFFL*RSFTII
Trigger: GATGATGGTGAAGGATCTCAACAAGAAGAAGTGATT...CACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTAACCCTGTTCCTGTCTaGGTACAAAAAGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVNPVPV*VQKDSV
Trigger: TACAGAATCTTTTTGTACCAAGACAGGAACAGGGTT...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp AAACTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTTTGTACTTGACCTCTaGCTCATTGTTCTTGGACTT +
Preference number: 5 (lower is better)
Translates to: KLFCCVIVPKLEFNSLRNFVLDL*LIVLGL
Trigger: AAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAA...ATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS-3UTR CAA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCATGTATCAAATACATaGGAATTACAAGGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGHVSNT*ELQGVA
Trigger: GGCAACTCCTTGTAATTCCAATGTATTTGATACATG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp CTGTTCTGCTGTGTTATAGTTCCCAAACTGGAGTTCAACAGTCTTAGAAATTCACATGTATCAAATACATaGGAATTACAAGGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: LFCCVIVPKLEFNSLRNSHVSNT*ELQGVA
Trigger: GGCAACTCCTTGTAATTCCAATGTATTTGATACATG...TGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000632792.1
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCAAAGGTGTGGGTACTaGTATTCATCAATGAATCCA +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVQRCGY*YSSMNP
Trigger: TGGATTCATTGATGAATACAAGTACCCACACCTTTG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS-3UTR CAA 90 bp ATTTCATGTAAACACAGCAATCAGTTCTTTTCAGGAAGAGAGAACCTGAATGGGCTTGGGAAACTTGGTTaGCTTCAACAAGTATTTACT +
Preference number: 5 (lower is better)
Translates to: ISCKHSNQFFSGRENLNGLGKLG*LQQVFT
Trigger: AGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAAG...CCCATTCAGGTTCTCTCTTCCTGAAAAGAACTGATTGCTGTGTTTACATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS GCA 90 bp AGTATCAGGTCATGGAAAATCACTTTAGGAAAAAGTGTATACATTTaGAACAAAGCTCTTCTTTGGCTCCTGTTCATCAGTCTTAACCTA +
Preference number: 5 (lower is better)
Translates to: SIRSWKITLGKSVYI*NKALLWLLFISLNL
Trigger: TAGGTTAAGACTGATGAACAGGAGCCAAAGAAGAGCTTTGTTGCAAATGTATACACTTTTTCCTAAAGTGATTTTCCATGACCTGATACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS CCA 90 bp TCACTTCATGGATTTATGAGCTCTTACTCATATAATCAACAAAACTaGCACAGAACTCTTCACCTTTACAAAGGCAAGAAGGCAAATCTT +
Preference number: 5 (lower is better)
Translates to: SLHGFMSSYSYNQQN*HRTLHLYKGKKANL
Trigger: AAGATTTGCCTTCTTGCCTTTGTAAAGGTGAAGAGTTCTGTGCCAGTTTTGTTGATTATATGAGTAAGAGCTCATAAATCCATGAAGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS-3UTR CAA 90 bp GGTAAAAATAGTGACCATGAACTCAAATCCATACTAGTGAAAGAGCTAAGCGTTCTTGGGAAACTTGGTTaGCTTCAACAAGTATTTACT +
Preference number: 5 (lower is better)
Translates to: GKNSDHELKSILVKELSVLGKLG*LQQVFT
Trigger: AGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAAG...AACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CCA 72 bp GCGACCCGCGCCATAGGGCTGGCGCTTTCACCGCCCTaGCCGGCCGTCCTCAGGCGGTCCGTCAGTCCACCC +
Preference number: 6 (lower is better)
Translates to: ATRAIGLALSPP*PAVLRRSVSPP
Trigger: GGGTGGACTGACGGACCGCCTGAGGACGGCCGGCCAGGGCGGTGAAAGCGCCAGCCCTATGGCGCGGGTCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262879.11
ENST00000397042.7
CDS GCA 72 bp GACGACGAAGGCCACTCGAGCCAGCCGGCTGGGATCTaGTCAGGCAACTTCCGACTGCCAGGGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: DDEGHSSQPAGI*SGNFRLPGAAA
Trigger: CGCCGCCGCCCCTGGCAGTCGGAAGTTGCCTGAGCAGATCCCAGCCGGCTGGCTCGAGTGGCCTTCGTCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS CCA 72 bp GCCAAGGGACGACGAAGGCCACTCGAGCCAGCCGGCTaGGATCTGCTCAGGCAACTTCCGACTGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: AKGRRRPLEPAG*DLLRQLPTARG
Trigger: GCCCCTGGCAGTCGGAAGTTGCCTGAGCAGATCCCAGCCGGCTGGCTCGAGTGGCCTTCGTCGTCCCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS TCA 72 bp CGAGGGGCAGGCAGTGGCCGGGGTTCTGAACTAGTCTaGTTTGGACTTGACAGAGGAGAGGTGGAGGACGTC +
Preference number: 6 (lower is better)
Translates to: RGAGSGRGSELV*FGLDRGEVEDV
Trigger: GACGTCCTCCACCTCTCCTCTGTCAAGTCCAAATCAGACTAGTTCAGAACCCCGGCCACTGCCTGCCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
CDS TCA 72 bp CTTGTCTCAGGTCCAAGGGGAGGAACAGGGCGACCCTaGGGCAGCTTCCTCATTCTGGAACTGGGACTGAGC +
Preference number: 6 (lower is better)
Translates to: LVSGPRGGTGRP*GSFLILELGLS
Trigger: GCTCAGTCCCAGTTCCAGAATGAGGAAGCTGCCTCAGGGTCGCCCTGTTCCTCCCCTTGGACCTGAGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461147.1
ENST00000632792.1
CDS CAA 90 bp CTGAAGGGGTACCTAACACCTGCCCAAGAGGACGGACTACAGCATTaGCCACCTCTCGTCCAACGCTCTCTGGATAGCTGTGCAGCACAC +
Preference number: 6 (lower is better)
Translates to: LKGYLTPAQEDGLQH*PPLVQRSLDSCAAH
Trigger: GTGTGCTGCACAGCTATCCAGAGAGCGTTGGACGAGAGGTGGCAAATGCTGTAGTCCGTCCTCTTGGGCAGGTGTTAGGTACCCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CAA 72 bp CGGGCTGTTTGGAATTCCTGGGCAGGAGGCGGGGGCTaGCAATCCGTAACTGGGTCAGGAAAACTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: RAVWNSWAGGGG*QSVTGSGKLLF
Trigger: GAAGAGAAGTTTTCCTGACCCAGTTACGGATTGCAAGCCCCCGCCTCCTGCCCAGGAATTCCAAACAGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS TCA 72 bp TGGCGCCACTGGGAGTTGAGTCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGCCCAGCAGCTGAATCT +
Preference number: 6 (lower is better)
Translates to: WRHWELSLWVTR*MLRIRSPAAES
Trigger: AGATTCAGCTGCTGGGCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp TGGCGCCACTGGGAGTTGAGTCTTTGGGTGACGAGATaGATGCTGCGAATCAGGAGCCCAGCAGCTGAATCA +
Preference number: 6 (lower is better)
Translates to: WRHWELSLWVTR*MLRIRSPAAES
Trigger: TGATTCAGCTGCTGGGCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397042.7
CDS GCA 72 bp GAGTGCACAAATGACCTTGCTCCACTGCTCCACCACTaGTGGGTGATGCCTCCAGTTAGCCACCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: ECTNDLAPLLHH*WVMPPVSHHLL
Trigger: AAGGAGATGGTGGCTAACTGGAGGCATCACCCAGCAGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000495949.1
CDS GCA 72 bp TTCTCACTACCAGCCACTGAAGGGGTACCTAACACCTaGCCAAGAGGACGGACTACAGCATTTGCCACCTCT +
Preference number: 6 (lower is better)
Translates to: FSLPATEGVPNT*PRGRTTAFATS
Trigger: AGAGGTGGCAAATGCTGTAGTCCGTCCTCTTGGGCAGGTGTTAGGTACCCCTTCAGTGGCTGGTAGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CCA 72 bp AGGAGCTCTAGAGCTGCCAGTGATATGCTCATGTCTTaGCGCCACTGGGAGTTGAGTCTTTGGGTGACGAGA +
Preference number: 6 (lower is better)
Translates to: RSSRAASDMLMS*RHWELSLWVTR
Trigger: TCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCAAGACATGAGCATATCACTGGCAGCTCTAGAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS CCA 72 bp GCCAGACACAGAGACACTGAAAAGCTGCCACTATCATaGAGTGCAGATCCCTGGAGTGTAAAGGAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: ARHRDTEKLPLS*SADPWSVKELA
Trigger: GGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS CAA 72 bp TATGCTCATGTCTTGGCGCCACTGGGAGTTGAGTCTTaGGGTGACGAGATGAATGCTGCGAATCAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: YAHVLAPLGVES*GDEMNAANQEP
Trigger: GGGCTCCTGATTCGCAGCATTCATCTCGTCACCCAAAGACTCAACTCCCAGTGGCGCCAAGACATGAGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp TCTCGGGCCATGAGAGATGACTCACGGGCCAGTTTCTaGATGGCTCTCAGGACCTGTAAGCATAGTCGAATC +
Preference number: 6 (lower is better)
Translates to: SRAMRDDSRASF*MALRTCKHSRI
Trigger: GATTCGACTATGCTTACAGGTCCTGAGAGCCATTCAGAAACTGGCCCGTGAGTCATCTCTCATGGCCCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS TCA 72 bp GGTGCACACAGAACTGATGGCTCGCTTCCGGTCTCCTaGGTCAACCATCACTTTTACCTTTGCAAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: GAHRTDGSLPVS*VNHHFYLCKAR
Trigger: TCTGGCCTTGCAAAGGTAAAAGTGATGGTTGACTCAGGAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS GCA 72 bp AGGCAGGGCAATGACAATAACCTACCTGGAAGTGAGTaGACAAATGACCTTGCTCCACTGCTCCACCACTGC +
Preference number: 6 (lower is better)
Translates to: RQGNDNNLPGSE*TNDLAPLLHHC
Trigger: GCAGTGGTGGAGCAGTGGAGCAAGGTCATTTGTGCACTCACTTCCAGGTAGGTTATTGTCATTGCCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495949.1
CDS CCA 72 bp TGCAGACTCCTCAGCAGATGGCTTGGAGTAGGAGGCTaGAGGAATCATGAACAGGCACAGGCTAGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: CRLLSRWLGVGG*RNHEQAQARKE
Trigger: TTCTTTCCTAGCCTGTGCCTGTTCATGATTCCTCCAGCCTCCTACTCCAAGCCATCTGCTGAGGAGTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS CCA 72 bp AAGGGGACACTGGGATTTTGCAGACTCCTCAGCAGATaGCTTGGAGTAGGAGGCTGGAGGAATCATGAACAG +
Preference number: 6 (lower is better)
Translates to: KGTLGFCRLLSR*LGVGGWRNHEQ
Trigger: CTGTTCATGATTCCTCCAGCCTCCTACTCCAAGCCATCTGCTGAGGAGTCTGCAAAATCCCAGTGTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS CAA 90 bp AGTTTTCTATATCATCATAGCGTTCCACCCAGACTACAGAAACTCTaGTCTCAGGTCCAAGGGGAGGAACAGGGCGACCCTGAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: SFLYHHSVPPRLQKL*SQVQGEEQGDPEAA
Trigger: AGCTGCCTCAGGGTCGCCCTGTTCCTCCCCTTGGACCTGAGACAAGAGTTTCTGTAGTCTGGGTGGAACGCTATGATGATATAGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461147.1
ENST00000632792.1
CDS TCA 72 bp ATCGGGAGTCGTGGGCTCCGTGCTTCCACCACTTGCTaGACTAATACCACTATTGGTGCGACTATGACTCTT +
Preference number: 6 (lower is better)
Translates to: IGSRGLRASTTC*TNTTIGATMTL
Trigger: AAGAGTCATAGTCGCACCAATAGTGGTATTAGTTCAGCAAGTGGTGGAAGCACGGAGCCCACGACTCCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp ATATCAGGGTGCTCTGTCAGCCAGACACAGAGACACTaGAAAGCTGCCACTATCATGGAGTGCAGATCCCTG +
Preference number: 6 (lower is better)
Translates to: ISGCSVSQTQRH*KAATIMECRSL
Trigger: CAGGGATCTGCACTCCATGATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTGGCTGACAGAGCACCCTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp GAAACAACAGTAAGACTTCCCAAGTTTCTCGGGCCATaGGAGATGACTCACGGGCCAGTTTCTGAATGGCTC +
Preference number: 6 (lower is better)
Translates to: ETTVRLPKFLGP*EMTHGPVSEWL
Trigger: GAGCCATTCAGAAACTGGCCCGTGAGTCATCTCTCATGGCCCGAGAAACTTGGGAAGTCTTACTGTTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS GCA 72 bp GGGGCTTCATTACCATGCAGTGTGCTTCTGGCTTCCTaGCACCCTAATCAACTCTTAAGTTTCACTGCAAGG +
Preference number: 6 (lower is better)
Translates to: GASLPCSVLLAS*HPNQLLSFTAR
Trigger: CCTTGCAGTGAAACTTAAGAGTTGATTAGGGTGGCAGGAAGCCAGAAGCACACTGCATGGTAATGAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS CCA 72 bp AGCCTAAGATTAGTAAAGGGACCTGTTGCTTGGCAGTaGTCTGAGAAAAGCCAAGGGGTCAGTGTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: SLRLVKGPVAWQ*SEKSQGVSVLR
Trigger: TCTGAGCACACTGACCCCTTGGCTTTTCTCAGACCACTGCCAAGCAACAGGTCCCTTTACTAATCTTAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490114.1
CDS CAA 72 bp CCACCATCTCCTTGGCTGTTTTCCAATAAGGAGGTGTaGGGAAGCACCGAGTACAAGCTAGTAACCACACCT +
Preference number: 6 (lower is better)
Translates to: PPSPWLFSNKEV*GSTEYKLVTTP
Trigger: AGGTGTGGTTACTAGCTTGTACTCGGTGCTTCCCAACACCTCCTTATTGGAAAACAGCCAAGGAGATGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000495949.1
CDS TCA 72 bp GACTACACTGATAAACAATGTAGGTGCACACAGAACTaGTGGCTCGCTTCCGGTCTCCTGAGTCAACCATCA +
Preference number: 6 (lower is better)
Translates to: DYTDKQCRCTQN*WLASGLLSQPS
Trigger: TGATGGTTGACTCAGGAGACCGGAAGCGAGCCATCAGTTCTGTGTGCACCTACATTGTTTATCAGTGTAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp ATTCACAAGACTACAAGGAGAGGCAGGACCACTAGGTaGAGGAAATGCGCCGAGCAACTGCATAATGCATGT +
Preference number: 6 (lower is better)
Translates to: IHKTTRRGRTTR*RKCAEQLHNAC
Trigger: ACATGCATTATGCAGTTGCTCGGCGCATTTCCTTCACCTAGTGGTCCTGCCTCTCCTTGTAGTCTTGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS CCA 72 bp ACTGAAAAGCTGCCACTATCATGGAGTGCAGATCCCTaGAGTGTAAAGGAGCTGGCCGACTACACTGATAAA +
Preference number: 6 (lower is better)
Translates to: TEKLPLSWSADP*SVKELADYTDK
Trigger: TTTATCAGTGTAGTCGGCCAGCTCCTTTACACTCCAGGGATCTGCACTCCATGATAGTGGCAGCTTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS CAA 72 bp GTCTTATTTCTCTGTGTAGGCCCCTCCTCTACCATGTaGAACGTAAGTGGTGAGAACAGGCATCCTTGCCTT +
Preference number: 6 (lower is better)
Translates to: VLFLCVGPSSTM*NVSGENRHPCL
Trigger: AAGGCAAGGATGCCTGTTCTCACCACTTACGTTCAACATGGTAGAGGAGGGGCCTACACAGAGAAATAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS CAA 90 bp AACTGGGTCAGGAAAACTTCTCTTCTGCAATTCCTCCTCACTCTGTaGCTCAAGGTGTATTTCATAAGCAATCTGCTGGGCCATGCCACT +
Preference number: 6 (lower is better)
Translates to: NWVRKTSLLQFLLTL*LKVYFISNLLGHAT
Trigger: AGTGGCATGGCCCAGCAGATTGCTTATGAAATACACCTTGAGCAACAGAGTGAGGAGGAATTGCAGAAGAGAAGTTTTCCTGACCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS CAA 90 bp TTTCCTTTTGTCTTATTTCTCTGTGTAGGCCCCTCCTCTACCATGTaGAACGTAAGTGGTGAGAACAGGCATCCTTGCCTTGTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: FPFVLFLCVGPSSTM*NVSGENRHPCLVLH
Trigger: GTGGAGAACAAGGCAAGGATGCCTGTTCTCACCACTTACGTTCAACATGGTAGAGGAGGGGCCTACACAGAGAAATAAGACAAAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS TCA 72 bp CATAGGATTGGAAACCATGGTGTCTGTGGACATTTGTaGCCCTTTCCGTCGAAACTCCATGCTAGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: HRIGNHGVCGHL*PFPSKLHASLC
Trigger: ACACAAGCTAGCATGGAGTTTCGACGGAAAGGGTCACAAATGTCCACAGACACCATGGTTTCCAATCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
CDS TCA 72 bp GGACTGAGCCTCTGTGAGGAATTAAGATTGTCTGTATaGTTGGGGAAAAGCTCAAGTGTCAGGGATGGCTGT +
Preference number: 6 (lower is better)
Translates to: GLSLCEELRLSV*LGKSSSVRDGC
Trigger: ACAGCCATCCCTGACACTTGAGCTTTTCCCCAATCATACAGACAATCTTAATTCCTCACAGAGGCTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS TCA 72 bp AGAACTGCAGTTCTTGAGTCCAACCTCCTGGAAAAGTaGAGTATAAAACTCTGGCTCCAGCTGCTTGTTCCG +
Preference number: 6 (lower is better)
Translates to: RTAVLESNLLEK*SIKLWLQLLVP
Trigger: CGGAACAAGCAGCTGGAGCCAGAGTTTTATACTTCACTTTTCCAGGAGGTTGGACTCAAGAACTGCAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461147.1
ENST00000632792.1
CDS TCA 72 bp CCTTCACTTTCCTTCCCCTTCCCAGCAATAAGGGTCTaGGAACATGCTTCTTTTACATACTGGCTGATGCCA +
Preference number: 6 (lower is better)
Translates to: PSLSFPFPAIRV*EHASFTYWLMP
Trigger: TGGCATCAGCCAGTATGTAAAAGAAGCATGTTCTCAGACCCTTATTGCTGGGAAGGGGAAGGAAAGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS TCA 72 bp GACGAGATGAATGCTGCGAATCAGGAGCCCAGCAGCTaGATCTGTATTAAGAGCTGTCGATCCATAATCTCT +
Preference number: 6 (lower is better)
Translates to: DEMNAANQEPSS*ICIKSCRSIIS
Trigger: AGAGATTATGGATCGACAGCTCTTAATACAGATTCAGCTGCTGGGCTCCTGATTCGCAGCATTCATCTCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632792.1
CDS CCA 72 bp AATATATATGCTTGGAAAACCAATAGGGACACTGGGTaGAAGGAGAGGCCAAGAGTACTCTGCTGCATGGAG +
Preference number: 6 (lower is better)
Translates to: NIYAWKTNRDTG*KERPRVLCCME
Trigger: CTCCATGCAGCAGAGTACTCTTGGCCTCTCCTTCCACCCAGTGTCCCTATTGGTTTTCCAAGCATATATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490114.1
CDS CAA 90 bp GCATCCTTTACCCTCATAGATGCAGGGTTTGGCTCCTTATCTCCTTaGTACTTGACCTCTTGCTCATTGTTCTTGGACTTACTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: ASFTLIDAGFGSLSP*YLTSCSLFLDLLPE
Trigger: CTCAGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAAGGAGATAAGGAGCCAAACCCTGCATCTATGAGGGTAAAGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS GCA 72 bp TCATCACAACAATTAATAGACCAACTGGTAGAAACATaGCCAGTCCAACCAGGGTGTCTGCCCACATCTACT +
Preference number: 6 (lower is better)
Translates to: SSQQLIDQLVET*PVQPGCLPTST
Trigger: AGTAGATGTGGGCAGACACCCTGGTTGGACTGGGCATGTTTCTACCAGTTGGTCTATTAATTGTTGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS GCA 72 bp AGAAAGAAAAACGAGTTGTTTGGGGCTTCATTACCATaGAGTGTGCTTCTGGCTTCCTGCCACCCTAATCAA +
Preference number: 6 (lower is better)
Translates to: RKKNELFGASLP*SVLLASCHPNQ
Trigger: TTGATTAGGGTGGCAGGAAGCCAGAAGCACACTGCATGGTAATGAAGCCCCAAACAACTCGTTTTTCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS CCA 72 bp TGGCTCTCAGGACCTGTAAGCATAGTCGAATCTGACTaGAACCCTGTTCCTGTCTTGGTACAAAAAGATTCT +
Preference number: 6 (lower is better)
Translates to: WLSGPVSIVESD*NPVPVLVQKDS
Trigger: AGAATCTTTTTGTACCAAGACAGGAACAGGGTTCCAGTCAGATTCGACTATGCTTACAGGTCCTGAGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
CDS CAA 72 bp GGATTTTCAGTAGGGCACTGGCATGGTCATTTGTGGTaGAAGATGAATACTATGGTGGCAGCAAGTAGGATG +
Preference number: 6 (lower is better)
Translates to: GFSVGHWHGHLW*KMNTMVAASRM
Trigger: CATCCTACTTGCTGCCACCATAGTATTCATCTTCAACCACAAATGACCATGCCAGTGCCCTACTGAAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS CAA 90 bp TTTACCCTCATAGATGCAGGGTTTGGCTCCTTATCTCCTTTGTACTaGACCTCTTGCTCATTGTTCTTGGACTTACTTCCTGAGATACCC +
Preference number: 6 (lower is better)
Translates to: FTLIDAGFGSLSPLY*TSCSLFLDLLPEIP
Trigger: GGGTATCTCAGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAAGGAGATAAGGAGCCAAACCCTGCATCTATGAGGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS GCA 72 bp TTCCTTCCCCTTCCCAGCAATAAGGGTCTGAGAACATaGTTCTTTTACATACTGGCTGATGCCAATTACCAT +
Preference number: 6 (lower is better)
Translates to: FLPLPSNKGLRT*FFYILADANYH
Trigger: ATGGTAATTGGCATCAGCCAGTATGTAAAAGAAGCATGTTCTCAGACCCTTATTGCTGGGAAGGGGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461423.1
CDS CCA 72 bp AAACCATGTCTGTGCAACACACTCATTATCCATTTCTaGAGGGATCAGACTGGCATCTTCATCGGGAACTTT +
Preference number: 6 (lower is better)
Translates to: KPCLCNTLIIHF*RDQTGIFIGNF
Trigger: AAAGTTCCCGATGAAGATGCCAGTCTGATCCCTCCAGAAATGGATAATGAGTGTGTTGCACAGACATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
CDS CAA 72 bp AGGAAAACTTCTCTTCTGCAATTCCTCCTCACTCTGTaGCTCAAGGTGTATTTCATAAGCAATCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RKTSLLQFLLTL*LKVYFISNLLG
Trigger: GCCCAGCAGATTGCTTATGAAATACACCTTGAGCAACAGAGTGAGGAGGAATTGCAGAAGAGAAGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS CAA 90 bp GCCAGGATGACACTGTTATCCAAGACAAAGTACCGGAAACTATGCTaGTTTATGGTTGGCAGCCTGGAGTATTTAATCAAAGTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: ARMTLLSKTKYRKLC*FMVGSLEYLIKVVS
Trigger: TGAGACCACTTTGATTAAATACTCCAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTACTTTGTCTTGGATAACAGTGTCATCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp AAAAATCCAGGTATCGTGGAATCAAGTGCAATAAGGTaGGGAGGTAGACGACTATTTGCAGGTTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: KNPGIVESSAIR*GGRRLFAGSFS
Trigger: ACTGAAGGAACCTGCAAATAGTCGTCTACCTCCTCACCTTATTGCACTTGATTCCACGATACCTGGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS TCA 72 bp TCTCTGACCTCTAGCCCTAGATTTAAAGAGCTCCTGTaGTTAGGTCAGGTCTACTTGGAAAATCTCCCTTTT +
Preference number: 6 (lower is better)
Translates to: SLTSSPRFKELL*LGQVYLENLPF
Trigger: AAAAGGGAGATTTTCCAAGTAGACCTGACCTAATCACAGGAGCTCTTTAAATCTAGGGCTAGAGGTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS CCA 72 bp GTCTGTATGATTGGGGAAAAGCTCAAGTGTCAGGGATaGCTGTTTCAGAATTCCTGGCATAAGATCCATATT +
Preference number: 6 (lower is better)
Translates to: VCMIGEKLKCQG*LFQNSWHKIHI
Trigger: AATATGGATCTTATGCCAGGAATTCTGAAACAGCCATCCCTGACACTTGAGCTTTTCCCCAATCATACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS CAA 72 bp ATAGATGCAGGGTTTGGCTCCTTATCTCCTTTGTACTaGACCTCTTGCTCATTGTTCTTGGACTTACTTCCT +
Preference number: 6 (lower is better)
Translates to: IDAGFGSLSPLY*TSCSLFLDLLP
Trigger: AGGAAGTAAGTCCAAGAACAATGAGCAAGAGGTCAAGTACAAAGGAGATAAGGAGCCAAACCCTGCATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp TTTAGCTTTGACTCTCTCTCTAACTTCTTCCATCTCTaGCCTCTAGCCCTAGATTTAAAGAGCTCCTGTGAT +
Preference number: 6 (lower is better)
Translates to: FSFDSLSNFFHL*PLALDLKSSCD
Trigger: ATCACAGGAGCTCTTTAAATCTAGGGCTAGAGGTCAGAGATGGAAGAAGTTAGAGAGAGAGTCAAAGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS GCA 72 bp AGTGACTATTTCATGCAAATCTGGAATGCTGAGATCTaGTTTCACAAAAGGAATCTTGTCCACCTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SDYFMQIWNAEI*FHKRNLVHLFR
Trigger: CCTGAAGAGGTGGACAAGATTCCTTTTGTGAAAGCAGATCTCAGCATTCCAGATTTGCATGAAATAGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS GCA 72 bp GCTCAAGGTGTATTTCATAAGCAATCTGCTGGGCCATaGCACTCCTTAATTTTTCGTGTCTCTCTTCTAATT +
Preference number: 6 (lower is better)
Translates to: AQGVFHKQSAGP*HSLIFRVSLLI
Trigger: AATTAGAAGAGAGACACGAAAAATTAAGGAGTGGCATGGCCCAGCAGATTGCTTATGAAATACACCTTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS TCA 72 bp AAAACTACCCAGTCATTCATTTGTCAAGGTGCTCAGTaGCCAAGTATCAGGTCATGGAAAATCACTTTAGGA +
Preference number: 6 (lower is better)
Translates to: KTTQSFICQGAQ*PSIRSWKITLG
Trigger: TCCTAAAGTGATTTTCCATGACCTGATACTTGGTCACTGAGCACCTTGACAAATGAATGACTGGGTAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS GCA 72 bp ATGACACTGTTATCCAAGACAAAGTACCGGAAACTATaGTTGTTTATGGTTGGCAGCCTGGAGTATTTAATC +
Preference number: 6 (lower is better)
Translates to: MTLLSKTKYRKL*LFMVGSLEYLI
Trigger: GATTAAATACTCCAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTACTTTGTCTTGGATAACAGTGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS CAA 72 bp ACAATATTTAACATTGCCCCTAATATCATTTGGGTGTaGTTGGGGTCCGTTTCAGTTTGCAAGGCACCTATT +
Preference number: 6 (lower is better)
Translates to: TIFNIAPNIIWV*LGSVSVCKAPI
Trigger: AATAGGTGCCTTGCAAACTGAAACGGACCCCAACAACACCCAAATGATATTAGGGGCAATGTTAAATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS TCA 72 bp TGGCTGTTTCAGAATTCCTGGCATAAGATCCATATTTaGATCACTATCTTGGTCCGAGATGTTACTTTCCAA +
Preference number: 6 (lower is better)
Translates to: WLFQNSWHKIHI*ITILVRDVTFQ
Trigger: TTGGAAAGTAACATCTCGGACCAAGATAGTGATTCAAATATGGATCTTATGCCAGGAATTCTGAAACAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS TCA 72 bp GTGATTAGGTCAGGTCTACTTGGAAAATCTCCCTTTTaGTTAACTCAAAGTAACCCAATTAAACCCACAGGA +
Preference number: 6 (lower is better)
Translates to: VIRSGLLGKSPF*LTQSNPIKPTG
Trigger: TCCTGTGGGTTTAATTGGGTTACTTTGAGTTAATCAAAAGGGAGATTTTCCAAGTAGACCTGACCTAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461147.1
CDS CCA 72 bp TATTTAACATTGCCCCTAATATCATTTGGGTGTTGTTaGGGTCCGTTTCAGTTTGCAAGGCACCTATTAATA +
Preference number: 6 (lower is better)
Translates to: YLTLPLISFGCC*GPFQFARHLLI
Trigger: TATTAATAGGTGCCTTGCAAACTGAAACGGACCCCAACAACACCCAAATGATATTAGGGGCAATGTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS CCA 72 bp CACAGAATATTTAAATCCAACGTCATTTTTAGGAACTaGGCGAGGTTCAGGTACAAAAAGCTTCTGATTTGC +
Preference number: 6 (lower is better)
Translates to: HRIFKSNVIFRN*ARFRYKKLLIC
Trigger: GCAAATCAGAAGCTTTTTGTACCTGAACCTCGCCCAGTTCCTAAAAATGACGTTGGATTTAAATATTCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000632792.1
CDS CAA 72 bp ATATTTAACATTGCCCCTAATATCATTTGGGTGTTGTaGGGGTCCGTTTCAGTTTGCAAGGCACCTATTAAT +
Preference number: 6 (lower is better)
Translates to: IFNIAPNIIWVL*GSVSVCKAPIN
Trigger: ATTAATAGGTGCCTTGCAAACTGAAACGGACCCCAACAACACCCAAATGATATTAGGGGCAATGTTAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1
CDS CAA 72 bp ACACTGTTATCCAAGACAAAGTACCGGAAACTATGCTaGTTTATGGTTGGCAGCCTGGAGTATTTAATCAAA +
Preference number: 6 (lower is better)
Translates to: TLLSKTKYRKLC*FMVGSLEYLIK
Trigger: TTTGATTAAATACTCCAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTACTTTGTCTTGGATAACAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262879.11
ENST00000397040.5
ENST00000397042.7
ENST00000438490.2
ENST00000461423.1
ENST00000632792.1