RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RALGAPA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000188559

Ensembl transcript IDs: ENST00000202677.12, ENST00000424981.1, ENST00000427175.2, ENST00000430436.5, ENST00000495793.2, ENST00000620717.4

Found 1035 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGACACAGCCTGGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTaGTTTCTCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCC +
Preference number: 1 (lower is better)
Translates to: QDTAWGLRQQLFAAD*FLCCRTGKAHPGRP
Trigger: GGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCCAGGCTGTGTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp GGTCCAGGACACAGCCTGGGGCCTGCGCCAGCAGCTCTTCGCTGCTaGCTGATTTCTCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCG +
Preference number: 1 (lower is better)
Translates to: GPGHSLGPAPAALRC*LISLLQDGQGPPRA
Trigger: CGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCCAGGCTGTGTCCTGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp GGGGCTGCGTCTCTCGTGCTGCTGTCCCTTCCCACTGCAGGGCGTTaGTCTGTACCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCG +
Preference number: 1 (lower is better)
Translates to: GAASLVLLSLPTAGR*SVPGRCENKACAVA
Trigger: CGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGGAAGGGACAGCAGCACGAGAGACGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp TCGGGTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTaGCTGGGCCGCGGTGTGTCCTGGTGCACACACGTCTGCAAGGTG +
Preference number: 1 (lower is better)
Translates to: SGGCHQWRCVLSRCG*LGRGVSWCTHVCKV
Trigger: CACCTTGCAGACGTGTGTGCACCAGGACACACCGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCACCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTaGGCCGCGGTGTGTCCTGGTGCACACACGTCTGCAAGGTGTTCC +
Preference number: 1 (lower is better)
Translates to: VAAISGDVCFLGVAA*AAVCPGAHTSARCS
Trigger: GGAACACCTTGCAGACGTGTGTGCACCAGGACACACCGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp CATGACACCGATACAGCAGGTCCATGGGGCGCAGGTGGTGCCACCTaGGGAAGGTCAGGAAGACAGGATGTGCATGGCTCTGTGGATCTG +
Preference number: 1 (lower is better)
Translates to: HDTDTAGPWGAGGAT*GRSGRQDVHGSVDL
Trigger: CAGATCCACAGAGCCATGCACATCCTGTCTTCCTGACCTTCCTCAGGTGGCACCACCTGCGCCCCATGGACCTGCTGTATCGGTGTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp CTCTGCCCCCTCCCTGAAAGCGCAGAATCTTTTCCTGCTGTCATCTaGCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATC +
Preference number: 1 (lower is better)
Translates to: LCPLPESAESFPAVI*PEQPHQCPRVSGFI
Trigger: GATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGCTTTCAGGGAGGGGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
3UTR TCA 90 bp GGGACTCTGGAGCCTAGGAGCATGCGATGGCCTTCCCAACAGGAGTaGGGTAAACAGGAGACAGGAGCAGCTCAACAGCAGGATCAAGCC +
Preference number: 1 (lower is better)
Translates to: GTLEPRSMRWPSQQE*GKQETGAAQQQDQA
Trigger: GGCTTGATCCTGCTGTTGAGCTGCTCCTGTCTCCTGTTTACCTCACTCCTGTTGGGAAGGCCATCGCATGCTCCTAGGCTCCAGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp GACCTGCTGGTAGAGACCTACAGGGGACTCTGGAGCCTAGGAGCATaGGATGGCCTTCCCAACAGGAGTGAGGTAAACAGGAGACAGGAG +
Preference number: 1 (lower is better)
Translates to: DLLVETYRGLWSLGA*DGLPNRSEVNRRQE
Trigger: CTCCTGTCTCCTGTTTACCTCACTCCTGTTGGGAAGGCCATCGCATGCTCCTAGGCTCCAGAGTCCCCTGTAGGTCTCTACCAGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp GGCCCTTCCCAAAACGGCCCAGGGGCCAGAAGCTTCCTTCCACTTTaGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCT +
Preference number: 1 (lower is better)
Translates to: GPSQNGPGARSFLPL*GTLILFCSGGSQGA
Trigger: AGCACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGAAGCTTCTGGCCCCTGGGCCGTTTTGGGAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp TTTGGCCCAATTAGGGCCACTTCTGTTTCCAGATGGCTGACCTACTaGTACCACCGTGATGAGTCAGCGCTGTGCCTCAGGTGGGGCCCT +
Preference number: 1 (lower is better)
Translates to: FGPIRATSVSRWLTY*YHRDESALCLRWGP
Trigger: AGGGCCCCACCTGAGGCACAGCGCTGACTCATCACGGTGGTACCAGTAGGTCAGCCATCTGGAAACAGAAGTGGCCCTAATTGGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp AATTCTCGCCAGGATGAGCAGGCCCGCCCTTCCGACAGGAACGACTaGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCT +
Preference number: 1 (lower is better)
Translates to: NSRQDEQARPSDRND*LSSFSFVPRVSLAP
Trigger: AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGCCTGCTCATCCTGGCGAGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp AAGCTTCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTaGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTGCAATCCCC +
Preference number: 1 (lower is better)
Translates to: KLPSTLGHPHSLLFR*FSRCSCQWAWPAIP
Trigger: GGGGATTGCAGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp GGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGGATaGGCAGGCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTT +
Preference number: 1 (lower is better)
Translates to: GLQSPIKQKSKFSPG*AGPPFRQERLAQLF
Trigger: AAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGCCTGCTCATCCTGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp ACTGCAGGGCGTTGCTCTGTACCTGGCCGCTGTGAGAACAAAGCCTaGGCAGTGGCGATGGACTCTGGTAAGCTTCTTGGATTTACTTCC +
Preference number: 1 (lower is better)
Translates to: TAGRCSVPGRCENKA*AVAMDSGKLLGFTS
Trigger: GGAAGTAAATCCAAGAAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGGTACAGAGCAACGCCCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp CTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTaGGTCTCCCCGTTTTCCCTACAAAGGCCAGGTTCCAGCCAAACC +
Preference number: 1 (lower is better)
Translates to: LAQLFLICPKSESGS*VSPFSLQRPGSSQT
Trigger: GGTTTGGCTGGAACCTGGCCTTTGTAGGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp GCGATGGACTCTGGTAAGCTTCTTGGATTTACTTCCCAAGTGAAGTaGGGGGTGGAGCAAACCTCTAGCTCTGAGGCAGGTCAAGGGTCC +
Preference number: 1 (lower is better)
Translates to: AMDSGKLLGFTSQVK*GVEQTSSSEAGQGS
Trigger: GGACCCTTGACCTGCCTCAGAGCTAGAGGTTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATCCAAGAAGCTTACCAGAGTCCATCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp CAGTGGCGATGGACTCTGGTAAGCTTCTTGGATTTACTTCCCAAGTaGAGTGCGGGGTGGAGCAAACCTCTAGCTCTGAGGCAGGTCAAG +
Preference number: 1 (lower is better)
Translates to: QWRWTLVSFLDLLPK*SAGWSKPLALRQVK
Trigger: CTTGACCTGCCTCAGAGCTAGAGGTTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATCCAAGAAGCTTACCAGAGTCCATCGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp TACCACATTTTGGCCCAATTAGGGCCACTTCTGTTTCCAGATGGCTaGCCTACTGGTACCACCGTGATGAGTCAGCGCTGTGCCTCAGGT +
Preference number: 1 (lower is better)
Translates to: YHILAQLGPLLFPDG*PTGTTVMSQRCASG
Trigger: ACCTGAGGCACAGCGCTGACTCATCACGGTGGTACCAGTAGGTCAGCCATCTGGAAACAGAAGTGGCCCTAATTGGGCCAAAATGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp GTCTTACCACATTTTGGCCCAATTAGGGCCACTTCTGTTTCCAGATaGCTGACCTACTGGTACCACCGTGATGAGTCAGCGCTGTGCCTC +
Preference number: 1 (lower is better)
Translates to: VLPHFGPIRATSVSR*LTYWYHRDESALCL
Trigger: GAGGCACAGCGCTGACTCATCACGGTGGTACCAGTAGGTCAGCCATCTGGAAACAGAAGTGGCCCTAATTGGGCCAAAATGTGGTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp TCAACCTATGTCACCAAGTTTGGGTCACCCCACTTCCCCAACATGTaGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCT +
Preference number: 1 (lower is better)
Translates to: STYVTKFGSPHFPNM*LLGTADFVAEATQA
Trigger: AGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCACATGTTGGGGAAGTGGGGTGACCCAAACTTGGTGACATAGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp GGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCTaGTCAATCAACCTATGTCACCAAGTTTGGGTCACCCCACTTCCC +
Preference number: 1 (lower is better)
Translates to: GSVDLHELLLVRLRV*SINLCHQVWVTPLP
Trigger: GGGAAGTGGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp TCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTaGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGG +
Preference number: 1 (lower is better)
Translates to: SLLFRWFSRCSCQWA*PAIPYKAEKQILAR
Trigger: CCTGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp TTTCTGGAATCTTCTGAGTGTTCTAAGATAGGGGCATCACTGTCATaGCCTGAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTT +
Preference number: 1 (lower is better)
Translates to: FLESSECSKIGASLS*PEAPLRGEESLCLV
Trigger: AACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTCAGGTCATGACAGTGATGCCCCTATCTTAGAACACTCAGAAGATTCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp AGGAAGGTCAGGAAGACAGGATGTGCATGGCTCTGTGGATCTGCATaGGCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATG +
Preference number: 1 (lower is better)
Translates to: RKVRKTGCAWLCGSA*ALACKAEGLINQPM
Trigger: CATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATCCTGTCTTCCTGACCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 90 bp CCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTaGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTC +
Preference number: 1 (lower is better)
Translates to: PHSLLFRWFSRCSCQ*AWPAIPYKAEKQIL
Trigger: GAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp GTGAGGTTTCAGGACAAGATGATACAGCCTAGTTTGAGTCCCATCTaGGACACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTA +
Preference number: 1 (lower is better)
Translates to: VRFQDKMIQPSLSPI*DTVVGFTMGFRSPL
Trigger: TAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGTGTCTCAGATGGGACTCAAACTAGGCTGTATCATCTTGTCCTGAAACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
3UTR TCA 90 bp CACCGTGATGAGTCAGCGCTGTGCCTCAGGTGGGGCCCTAGTGGATaGATGATCCTCCGCAATTTTGCTGAAAGGGATTTATTACAAAAA +
Preference number: 1 (lower is better)
Translates to: HRDESALCLRWGPSG*MILRNFAERDLLQK
Trigger: TTTTTGTAATAAATCCCTTTCAGCAAAATTGCGGAGGATCATTCATCCACTAGGGCCCCACCTGAGGCACAGCGCTGACTCATCACGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp TTGACACCAGCCACAAGATTACGTCTACAGTGTTGTGGAAATCACTaGAAAGAATGCCATCTCCAAAACACTCACCACCAGCCTGGACAA +
Preference number: 1 (lower is better)
Translates to: LTPATRLRLQCCGNH*KECHLQNTHHQPGQ
Trigger: TTGTCCAGGCTGGTGGTGAGTGTTTTGGAGATGGCATTCTTTGCAGTGATTTCCACAACACTGTAGACGTAATCTTGTGGCTGGTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR TCA 90 bp ACATCTTTCCCTCTACCCTCAACCAAATGCAATTTCTATCTCCTCTaGTCTTCCAGAAACCTACTTGCACTTCTCAGGTGGTACCTGCCA +
Preference number: 1 (lower is better)
Translates to: TSFPLPSTKCNFYLL*SSRNLLALLRWYLP
Trigger: TGGCAGGTACCACCTGAGAAGTGCAAGTAGGTTTCTGGAAGATCAGAGGAGATAGAAATTGCATTTGGTTGAGGGTAGAGGGAAAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR CCA 90 bp GAAGGCCAAATTGACACCAGCCACAAGATTACGTCTACAGTGTTGTaGAAATCACTGCAAAGAATGCCATCTCCAAAACACTCACCACCA +
Preference number: 1 (lower is better)
Translates to: EGQIDTSHKITSTVL*KSLQRMPSPKHSPP
Trigger: TGGTGGTGAGTGTTTTGGAGATGGCATTCTTTGCAGTGATTTCCACAACACTGTAGACGTAATCTTGTGGCTGGTGTCAATTTGGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR TCA 90 bp CATATGGACAGACTGAGTGCAACTAAAACGATGGTTGTTTCATGTTaGATTTCCCTCGGATGCAGACGCTGCCCTTCAGTAGATATAAAG +
Preference number: 1 (lower is better)
Translates to: HMDRLSATKTMVVSC*ISLGCRRCPSVDIK
Trigger: CTTTATATCTACTGAAGGGCAGCGTCTGCATCCGAGGGAAATTCAACATGAAACAACCATCGTTTTAGTTGCACTCAGTCTGTCCATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 90 bp TCATGGAGCAGAAGTCCAGGAGAGTTCAATACGATTTCTAAATCCTaGCATATCTTTTCTACTAAAGCCAGCAATTCCGCAACAGGAGTT +
Preference number: 1 (lower is better)
Translates to: SWSRSPGEFNTISKS*HIFSTKASNSATGV
Trigger: AACTCCTGTTGCGGAATTGCTGGCTTTAGTAGAAAAGATATGTCAGGATTTAGAAATCGTATTGAACTCTCCTGGACTTCTGCTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 90 bp TATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTaGTATAGCAACACATCACTTACTATCAGGTTGGGAGAAGTATAT +
Preference number: 1 (lower is better)
Translates to: YLFTWDSFHLPPTLT*YSNTSLTIRLGEVY
Trigger: ATATACTTCTCCCAACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR TCA 90 bp AACATAAGGAAACATTCACTTCATGTGTATGTCATATGGACAGACTaGGTGCAACTAAAACGATGGTTGTTTCATGTTGAATTTCCCTCG +
Preference number: 1 (lower is better)
Translates to: NIRKHSLHVYVIWTD*VQLKRWLFHVEFPS
Trigger: CGAGGGAAATTCAACATGAAACAACCATCGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTCCTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGTTTCTGAGGCCTGTGTaGGGCCTCTCTGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: GACASSSSLLTDFSAAGRFLRPV*GLSGQQ
Trigger: CTGTTGCCCAGAGAGGCCTCACACAGGCCTCAGAAA...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGAGCAGCCACACCAGTaGCCACGTGTCAGTGGGTTC +
Preference number: 2 (lower is better)
Translates to: PGRCENKACAVAMDSGKLEQPHQ*PRVSGF
Trigger: GAACCCACTGACACGTGGGCACTGGTGTGGCTGCTC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CAA 90 bp GGGGGTACCCGTCTCAGCCTAGCGCCTGAAGCCGGCATGCGCCTTTaGTGTGGATGTGGTCTGTGTTGTTTTGAGCCTTGGGACACTTCC +
Preference number: 2 (lower is better)
Translates to: GGTRLSLAPEAGMRL*CGCGLCCFEPWDTS
Trigger: GGAAGTGTCCCAAGGCTCAAAACAACACAGACCACATCCACACAAAAGGCGCATGCCGGCTTCAGGCGCTAGGCTGAGACGGGTACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCTGCGTCTCTCGTGCTaGTGTCCCTTCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: PCSTFHLQTKAATENGRLLRLSC*CPFPLQ
Trigger: CTGCAGTGGGAAGGGACAGCAGCACGAGAGACGCAG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCAAGGACCCTGTATTTCTaGAATCTTCTGAGTGTTCTA +
Preference number: 2 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSRTLYF*NLLSVL
Trigger: TAGAACACTCAGAAGATTCCAGAAATACAGGGTCCT...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGTTGCCAGCCCCTTTGTaGATCATGCTTGGGTTCATA +
Preference number: 2 (lower is better)
Translates to: VAAISGDVCFLGVAAWAALPAPL*IMLGFI
Trigger: TATGAACCCAAGCATGATTCACAAAGGGGCTGGCAA...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTGCTGTCCCTTCCCACTaGAGGGCGTTGCTCTGTACC +
Preference number: 2 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPAVPSH*RALLCT
Trigger: GGTACAGAGCAACGCCCTGCAGTGGGAAGGGACAGC...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCGGGGCATCACTGTCATaGCCTGAAGCGCCTCTGCGT +
Preference number: 2 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVGASLS*PEAPLR
Trigger: ACGCAGAGGCGCTTCAGGTCATGACAGTGATGCCCC...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGAGCAAAGTTGCAGCGTaGGGCTTTTGGAGGCACAAG +
Preference number: 2 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRSKVAA*GFWRHK
Trigger: CTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCT...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCAAATTCTCGCCAGGATaGGCAGGCCCGCCCTTCCGA +
Preference number: 2 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVKFSPG*AGPPFR
Trigger: TCGGAAGGGCGGGCCTGCTCATCCTGGCGAGAATTT...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTTTCCTGCTGTCATCTaGCCAGAGCAGCCACACCAG +
Preference number: 2 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFFPAVI*PEQPHQ
Trigger: CTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAA...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
3UTR-3UTR CCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGTCCTGTCAGTGGGCCTaGCCTGCAATCCCCTATAAA +
Preference number: 2 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRSCQWA*PAIPYK
Trigger: TTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGA...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCCCTCTGCCCCCTCCCTaGAAGCGCAGAATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVPLPPP*KRRIFS
Trigger: GGAAAAGATTCTGCGCTTTCAGGGAGGGGGCAGAGG...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAAGCGCCTCTGCGTGGTaGGGAGAGCCTCTGCTTAGT +
Preference number: 2 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPSASAW*GEPLLS
Trigger: ACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCT...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCGCCGTTCTGATGGGGTaGGAGCCTCAGAAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVAVLMG*EPQKAS
Trigger: AGAAGCCTTCTGAGGCTCTCACCCCATCAGAACGGC...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCGCCCTTCAGCCCCCGTaGGTATCCTGGGCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTALQPP*VSWALP
Trigger: GGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGC...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCATTTCCTGCTGTCATCTaGCCAGAGCAGCCACACCAG +
Preference number: 2 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPFPAVI*PEQPHQ
Trigger: CTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAA...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGACCTGAAGCGCCTCTaGGTGGTGAGGAGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPDLKRL*VVRRAS
Trigger: AGAGGCTCTCCTCACCACGCAGAGGCGCTTCAGGTC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGCTGTCCCTTCCCACTaGAGGGCGTTGCTCTGTACC +
Preference number: 2 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPAVPSH*RALLCT
Trigger: GGTACAGAGCAACGCCCTGCAGTGGGAAGGGACAGC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTAGTTTGAGTCCCATCTaGGACACGGTAGTGGGATTC +
Preference number: 2 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFSLSPI*DTVVGF
Trigger: GAATCCCACTACCGTGTCTCAGATGGGACTCAAACT...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
3UTR-3UTR TCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTAGCAAAGTTGCAGCGTaGGGCTTTTGGAGGCACAAG +
Preference number: 2 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPSKVAA*GFWRHK
Trigger: CTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCT...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGTTTCTGAGGCCTGTGTaGGGCCTCTCTGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVFLRPV*GLSGQQ
Trigger: CTGTTGCCCAGAGAGGCCTCACACAGGCCTCAGAAA...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCCTCTTCGCTGCTGACTaGTTTCTCTGCTGCAGGACG +
Preference number: 2 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVLFAAD*FLCCRT
Trigger: CGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAG...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCCAGCAGGATCAAGCCTaGGTGATGGTGGCCAAGCTA +
Preference number: 2 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVQQDQA*VMVAKL
Trigger: TAGCTTGGCCACCATCACTCAGGCTTGATCCTGCTG...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCGGACACTTCCTGTCCTaGAGGAACTTATGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: PCSTFHLQTKAATENGRLGHFLS*RNLCKD
Trigger: GTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGTCC...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGGTCAGCACTCAGACTaGAGGCCAGGGCCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: WLLGTADFVAEATQAKFLGQHSD*RPGPLA
Trigger: AGCAAGGGGCCCTGGCCTCCAGTCTGAGTGCTGACC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
3UTR-3UTR CCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTGGTCAGCACTCAGACTaGAGGCCAGGGCCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: LRALVQQRNFLEILGLVAGQHSD*RPGPLA
Trigger: AGCAAGGGGCCCTGGCCTCCAGTCTGAGTGCTGACC...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
3UTR-3UTR CCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGCCCACGTGTCAGTaGGTTCATCTCTGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLVPTCQ*VHLWFL
Trigger: CAAAAACCAGAGATGAACCCACTGACACGTGGGCAC...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
3UTR-3UTR GCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTTTTCCTGCTGTCATCTaGCCAGAGCAGCCACACCAG +
Preference number: 2 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPFPAVI*PEQPHQ
Trigger: CTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAA...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTCGCCTGAAGCCGGCATaGGCCTTTTGTGTGGATGTG +
Preference number: 2 (lower is better)
Translates to: KTTPVHVITRNVAVRFPARLKPA*AFCVDV
Trigger: CACATCCACACAAAAGGCGCATGCCGGCTTCAGGCG...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCAGGTGGTTCTCAAGGTaGTCCTGTCAGTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPRWFSR*SCQWAW
Trigger: CCAGGCCCACTGACAGGAGCACCTTGAGAACCACCT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCTGGTCTGTGTTGTTTTaGGCCTTGGGACACTTCCTG +
Preference number: 2 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVWSVLF*ALGHFL
Trigger: CAGGAAGTGTCCCAAGGCTCAAAACAACACAGACCA...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTGAGGCCAGGGCCCCTTaGTCAAATATTGAAATGAGA +
Preference number: 2 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPEARAP*SNIEMR
Trigger: TCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTC...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
3UTR-3UTR GCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGAGGTGGTTCTCAAGGTaGTCCTGTCAGTGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGRWFSR*SCQWAW
Trigger: CCAGGCCCACTGACAGGAGCACCTTGAGAACCACCT...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTATGGTCTGTGTTGTTTTaGGCCTTGGGACACTTCCTG +
Preference number: 2 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALWSVLF*ALGHFL
Trigger: CAGGAAGTGTCCCAAGGCTCAAAACAACACAGACCA...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGCTCTTCGCTGCTGACTaGTTTCTCTGCTGCAGGACG +
Preference number: 2 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGLFAAD*FLCCRT
Trigger: CGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAG...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCGATTTACTTCCCAAGTaGAGTGCGGGGTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFDLLPK*SAGWSK
Trigger: TTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATC...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCTGTACCTGGCCGCTGTaGGAACAAAGCCTGCGCAGT +
Preference number: 2 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTCTWPL*EQSLRS
Trigger: ACTGCGCAGGCTTTGTTCTCACAGCGGCCAGGTACA...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTTTTAATCCGTTCCGCTaGGGGAGTAGCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LRALVQQRNFLEILGLVAFNPFR*GSSWER
Trigger: CCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAA...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620717.4
3UTR-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTACGCAGAATCTTTTCCTaGTGTCATCTGCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALRRIFS*CHLPRA
Trigger: TGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCG...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCACTTCCCAAGTGAAGTaGGGGGTGGAGCAAACCTCT +
Preference number: 2 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPTSQVK*GVEQTS
Trigger: AGAGGTTTGCTCCACCCCGCACTTCACTTGGGAAGT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCTGTGAGAACAAAGCCTaGGCAGTGGCGATGGACTCT +
Preference number: 2 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPCENKA*AVAMDS
Trigger: AGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACA...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAATTAAATCCCTCGCTTaGAATCGGCTACCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: TGLALPEASESYHILAQLIKSLA*NRLPKA
Trigger: AGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCAGGCTTCTTCAGGCCTaGGTGGCCAAGCAGCCTGAA +
Preference number: 2 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTRLLQA*VAKQPE
Trigger: TTCAGGCTGCTTGGCCACCCAGGCCTGAAGAAGCCT...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGAGTGAGTCTGGCTCCTaGGTCTCCCCGTTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: ALACKAEGLINQPMSPSLSESGS*VSPFSL
Trigger: TAGGGAAAACGGGGAGACTCAGGAGCCAGACTCACT...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGCATTTGTCCCAAGAGTaGGTCTGGCTCCTGAGTCTC +
Preference number: 2 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGHLSQE*VWLLSL
Trigger: GAGACTCAGGAGCCAGACTCACTCTTGGGACAAATG...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGACCAAAGCTGCTACTaGGAATGGCAGGCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALDQSCY*EWQAQK
Trigger: TTTTTGAGCCTGCCATTCTCAGTAGCAGCTTTGGTC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGAAGCAAGCTGCCCTCTaGCCCCTCCCTGAAAGCGCA +
Preference number: 2 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQKQAAL*PLPESA
Trigger: TGCGCTTTCAGGGAGGGGGCAGAGGGCAGCTTGCTT...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCTGCGTCTCTCGTGCTaGTGTCCCTTCCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQLRLSC*CPFPLQ
Trigger: CTGCAGTGGGAAGGGACAGCAGCACGAGAGACGCAG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTACATGTGGGAAAACACTaGACAACTGAGGTAAAACTT +
Preference number: 2 (lower is better)
Translates to: TGLALPEASESYHILAQLHVGKH*TTEVKL
Trigger: AAGTTTTACCTCAGTTGTCCAGTGTTTTCCCACATG...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGTTCTTCAGGCCTGGGTaGCCAAGCAGCCTGAAGGTA +
Preference number: 2 (lower is better)
Translates to: ALACKAEGLINQPMSPSLFFRPG*PSSLKV
Trigger: TACCTTCAGGCTGCTTGGCCACCCAGGCCTGAAGAA...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGAAAACACTGGACAACTaGGGTAAAACTTCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVKTLDN*GKTSPG
Trigger: CCCAGGAGAAGTTTTACCTCAGTTGTCCAGTGTTTT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGACAAGAAACATTTCTaGGGCCTGTGTGAGGCCTCT +
Preference number: 2 (lower is better)
Translates to: WLLGTADFVAEATQAKFLDKKHF*GLCEAS
Trigger: AGAGGCCTCACACAGGCCTCAGAAATGTTTCTTGTC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGAGAAACAACTTGGGGTaGAGAAGCAAGCTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGRNNLG*RSKLPS
Trigger: AGAGGGCAGCTTGCTTCTGCACCCCAAGTTGTTTCT...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGGTGAGGAGAGCCTCTaGTTAGTTAGCGGGCGTCAG +
Preference number: 2 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHGEESL*LVSGRQ
Trigger: CTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGCCCACTGCAGGGCGTTaGTCTGTACCTGGCCGCTGT +
Preference number: 2 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTPTAGR*SVPGRC
Trigger: ACAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGG...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCAGTCACTCTTCACATTaGCCTTCAGCCCCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTSHSSH*PSAPVS
Trigger: ACTCACGGGGGCTGAAGGGCAATGTGAAGAGTGACT...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCAGTTTGAGTCCCATCTaGGACACGGTAGTGGGATTC +
Preference number: 2 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTSLSPI*DTVVGF
Trigger: GAATCCCACTACCGTGTCTCAGATGGGACTCAAACT...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCTTGCCAGCCCCTTTGTaGATCATGCTTGGGTTCATA +
Preference number: 2 (lower is better)
Translates to: SCPAGTYARTGPCISGIFLPAPL*IMLGFI
Trigger: TATGAACCCAAGCATGATTCACAAAGGGGCTGGCAA...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGGTGGCCAAGCTATGCTaGCCAGATGTCTGGAATCAT +
Preference number: 2 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTVAKLC*PDVWNH
Trigger: ATGATTCCAGACATCTGGGCAGCATAGCTTGGCCAC...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGGGCTGTCAGATTCCCTaGTCCACGTTCCATCTCCAG +
Preference number: 2 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQGCQIP*STFHLQ
Trigger: CTGGAGATGGAACGTGGAGCAGGGAATCTGACAGCC...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGTGTCATCGGGGGTCATaGGGTCGTTATAATCCTCAG +
Preference number: 2 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTCHRGS*GRYNPQ
Trigger: CTGAGGATTATAACGACCCCATGACCCCCGATGACA...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGAGATGGCTGACCTACTaGTACCACCGTGATGAGTCA +
Preference number: 2 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTRWLTY*YHRDES
Trigger: TGACTCATCACGGTGGTACCAGTAGGTCAGCCATCT...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTAAAACACTGGACAACTaGGGTAAAACTTCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: WLLGTADFVAEATQAKFLKTLDN*GKTSPG
Trigger: CCCAGGAGAAGTTTTACCTCAGTTGTCCAGTGTTTT...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGTGGAGCCTAGGAGCATaGGATGGCCTTCCCAACAGG +
Preference number: 2 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTWSLGA*DGLPNR
Trigger: CCTGTTGGGAAGGCCATCGCATGCTCCTAGGCTCCA...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCACATGTGGGAAAACACTaGACAACTGAGGTAAAACTT +
Preference number: 2 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPHVGKH*TTEVKL
Trigger: AAGTTTTACCTCAGTTGTCCAGTGTTTTCCCACATG...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGTCCGACAGGAACGACTaGCTCAGCTCTTTCTCATTT +
Preference number: 2 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKSDRND*LSSFSF
Trigger: AAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGA...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTGAGGGAGAAAAGACTTaGGCTGCGAAATCCTCGAAT +
Preference number: 2 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFEGEKT*AAKSSN
Trigger: ATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTC...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620717.4
3UTR CAA 90 bp GCTGAAGGCCAAATTGACACCAGCCACAAGATTACGTCTACAGTGTaGTGGAAATCACTGCAAAGAATGCCATCTCCAAAACACTCACCA +
Preference number: 2 (lower is better)
Translates to: AEGQIDTSHKITSTV*WKSLQRMPSPKHSP
Trigger: TGGTGAGTGTTTTGGAGATGGCATTCTTTGCAGTGATTTCCACAACACTGTAGACGTAATCTTGTGGCTGGTGTCAATTTGGCCTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR TCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGATTTACTTCCCAAGTaGAGTGCGGGGTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHDLLPK*SAGWSK
Trigger: TTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGCCCTAGTGGATGAATaGTCCTCCGCAATTTTGCTG +
Preference number: 2 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHALVDE*SSAILL
Trigger: CAGCAAAATTGCGGAGGATCATTCATCCACTAGGGC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACCGCAGAATCTTTTCCTaGTGTCATCTGCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHRRIFS*CHLPRA
Trigger: TGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCG...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGAAACAACTTGGGGTaGAGAAGCAAGCTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHRNNLG*RSKLPS
Trigger: AGAGGGCAGCTTGCTTCTGCACCCCAAGTTGTTTCT...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTCAGTGGGTTCATCTCTaGTTTTTGGTGACTTTTTCT +
Preference number: 2 (lower is better)
Translates to: KTTPVHVITRNVAVRFPAQWVHL*FLVTFS
Trigger: AGAAAAAGTCACCAAAAACCAGAGATGAACCCACTG...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGCCTGCGCAGTGGCGATaGACTCTGGTAAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTPAQWR*TLVSFL
Trigger: CAAGAAGCTTACCAGAGTCCATCGCCACTGCGCAGG...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGACAAAGCCTGCGCAGTaGCGATGGACTCTGGTAAGC +
Preference number: 2 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTTKPAQ*RWTLVS
Trigger: GCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGT...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCATTAGACAATTGTTTTaGCAGCCCCTTTGTGAATCA +
Preference number: 2 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPIRQLF*QPLCES
Trigger: TGATTCACAAAGGGGCTGGCAAAACAATTGTCTAAT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGTCTCTTCTGTTCAGGTaGTTCTCAAGGTGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQSLLFR*FSRCSC
Trigger: ACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGA...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CAA 90 bp CATTTGCTTTGGTTTCTGGTAGGCACTCTGAATGAGCGATACGTTTaGCTCAGCATCCCACCTTATATACAATGGACTGCCACAAATAAG +
Preference number: 2 (lower is better)
Translates to: HLLWFLVGTLNERYV*LSIPPYIQWTATNK
Trigger: CTTATTTGTGGCAGTCCATTGTATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAGAAACCAAAGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCCCCTTGCTCAAATATTaGAATGAGACCTTTACGTGT +
Preference number: 2 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTPLLKY*NETFTC
Trigger: ACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGG...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000202677.12
3UTR-3UTR TCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGGGATCGCTGGTTCGTaGAAGCAAAATGAAATCATG +
Preference number: 2 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHGIAGS*KQNEIM
Trigger: CATGATTTCATTTTGCTTTCACGAACCAGCGATCCC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp TTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCACTTACTATCAGGTTTCCAGAAACCTACTTaGACTTCTCAGGTGGTACCT +
Preference number: 2 (lower is better)
Translates to: FIYPQLSLAIATHHLLSGFQKPT*TSQVVP
Trigger: AGGTACCACCTGAGAAGTGCAAGTAGGTTTCTGGAA...ACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGAGGACCCTGTATTTCTaGAATCTTCTGAGTGTTCTA +
Preference number: 2 (lower is better)
Translates to: ALACKAEGLINQPMSPSLRTLYF*NLLSVL
Trigger: TAGAACACTCAGAAGATTCCAGAAATACAGGGTCCT...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGCTAATAAGCCTTCCTTaGAGCCAAATGGGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: ALACKAEGLINQPMSPSLLISLP*SQMGKN
Trigger: ATTTTTGCCCATTTGGCTCCAAGGAAGGCTTATTAG...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCCTAATAAGCCTTCCTTaGAGCCAAATGGGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTLISLP*SQMGKN
Trigger: ATTTTTGCCCATTTGGCTCCAAGGAAGGCTTATTAG...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGACATCAGCTTTGCTCTaGATGGAATCTGGGAATAGG +
Preference number: 2 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQTSALL*MESGNR
Trigger: CCTATTCCCAGATTCCATCCAGAGCAAAGCTGATGT...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR TCA 90 bp GCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTTAATCCGTCCCTTGCTCAAATATTaGAATGAGACCTTTACGTGT +
Preference number: 2 (lower is better)
Translates to: ARAPCSNIEMRPLRVLIRPLLKY*NETFTC
Trigger: ACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGG...ACGGATTAAAACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620717.4
3UTR-3UTR TCA 90 bp CATTTGCTTTGGTTTCTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATACCTAAGAAGATATaGGCATCTCATAATGGTCAC +
Preference number: 2 (lower is better)
Translates to: HLLWFLVGTLNERYVLLSIPKKI*ASHNGH
Trigger: GTGACCATTATGAGATGCTCATATCTTCTTAGGTAT...GCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAGAAACCAAAGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR TCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACAAATTTCTATCTCCTCTaGTCTTCCAGAAACCTACTT +
Preference number: 2 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTNFYLL*SSRNLL
Trigger: AAGTAGGTTTCTGGAAGATCAGAGGAGATAGAAATT...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR CCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATCAGTGGGTTCATCTCTaGTTTTTGGTGACTTTTTCT +
Preference number: 2 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHQWVHL*FLVTFS
Trigger: AGAAAAAGTCACCAAAAACCAGAGATGAACCCACTG...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR GCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGAAGAAACTTGATCATTaGAATTTTCCACCCCAGATA +
Preference number: 2 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTKKLDH*NFPPQI
Trigger: TATCTGGGGTGGAAAATTGCAATGATCAAGTTTCTT...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp CTGGAGAGTCGGGTGGCTGCCATCAGTGGAGATGTGTaGTTTCTCGGTGTGGCTGCCTGGGCCGCGGTGTGT +
Preference number: 3 (lower is better)
Translates to: LESRVAAISGDV*FLGVAAWAAVC
Trigger: ACACACCGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCACCCGACTCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp TCCCACTGCAGGGCGTTGCTCTGTACCTGGCCGCTGTaGGAACAAAGCCTGCGCAGTGGCGATGGACTCTGG +
Preference number: 3 (lower is better)
Translates to: SHCRALLCTWPL*EQSLRSGDGLW
Trigger: CCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp CGCCTTTCCCAGGACCAGCCCACCCATCATAAGCCCTaGGTTAGGGGCTGCGTCTCTCGTGCTGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: RLSQDQPTHHKP*VRGCVSRAAVP
Trigger: AGGGACAGCAGCACGAGAGACGCAGCCCCTAACTCAGGGCTTATGATGGGTGGGCTGGTCCTGGGAAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp TGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTaGCTGGGCCGCGGTGTGTCCTGGTGCACACACGTC +
Preference number: 3 (lower is better)
Translates to: CHQWRCVLSRCG*LGRGVSWCTHV
Trigger: GACGTGTGTGCACCAGGACACACCGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp TCTCTCGTGCTGCTGTCCCTTCCCACTGCAGGGCGTTaGTCTGTACCTGGCCGCTGTGAGAACAAAGCCTGC +
Preference number: 3 (lower is better)
Translates to: SLVLLSLPTAGR*SVPGRCENKAC
Trigger: GCAGGCTTTGTTCTCACAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGGAAGGGACAGCAGCACGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp ATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTaGGCCGCGGTGTGTCCTGGTGCACACACGTCTGCA +
Preference number: 3 (lower is better)
Translates to: ISGDVCFLGVAA*AAVCPGAHTSA
Trigger: TGCAGACGTGTGTGCACCAGGACACACCGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp GATACAGCAGGTCCATGGGGCGCAGGTGGTGCCACCTaGGGAAGGTCAGGAAGACAGGATGTGCATGGCTCT +
Preference number: 3 (lower is better)
Translates to: DTAGPWGAGGAT*GRSGRQDVHGS
Trigger: AGAGCCATGCACATCCTGTCTTCCTGACCTTCCTCAGGTGGCACCACCTGCGCCCCATGGACCTGCTGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGATGCAGCGTGAGGCTTTaGGAGGCACAAGGCCATTCG +
Preference number: 3 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRCSVRL*EAQGHS
Trigger: CGAATGGCCTTGTGCCTCCAAAAGCCTCACGCTGCA...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp ACTGGCTCCTCAGTGAAAATGGCCGTTCTGATGGGGTaGGAGCCTCAGAAGGCTTCTTCAGGCCTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: TGSSVKMAVLMG*EPQKASSGLGG
Trigger: GCCACCCAGGCCTGAAGAAGCCTTCTGAGGCTCTCACCCCATCAGAACGGCCATTTTCACTGAGGAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp AAGAGGTTAACTGGAGAGTCGGGTGGCTGCCATCAGTaGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: KRLTGESGGCHQ*RCVLSRCGCLG
Trigger: GCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCACCCGACTCTCCAGTTAACCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCTCCCACTGCAGGGCGTaGCTCTGTACCTGGCCGCTG +
Preference number: 3 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPSHCRA*LCTWPL
Trigger: CAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGGA...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp GTAGAGACCTACAGGGGACTCTGGAGCCTAGGAGCATaGGATGGCCTTCCCAACAGGAGTGAGGTAAACAGG +
Preference number: 3 (lower is better)
Translates to: VETYRGLWSLGA*DGLPNRSEVNR
Trigger: CCTGTTTACCTCACTCCTGTTGGGAAGGCCATCGCATGCTCCTAGGCTCCAGAGTCCCCTGTAGGTCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp CAGGATGAGCAGGCCCGCCCTTCCGACAGGAACGACTaGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGT +
Preference number: 3 (lower is better)
Translates to: QDEQARPSDRND*LSSFSFVPRVS
Trigger: ACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGCCTGCTCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp TCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTaGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: STLGHPHSLLFR*FSRCSCQWAWP
Trigger: AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAACAGGAGCAGCAAAGTaGCAGCGTGAGGCTTTTGGA +
Preference number: 3 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRTGAAK*QREAFG
Trigger: TCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGT...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp TCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGGATaGGCAGGCCCGCCCTTCCGACAGGAACGACTGGCT +
Preference number: 3 (lower is better)
Translates to: SPIKQKSKFSPG*AGPPFRQERLA
Trigger: AGCCAGTCGTTCCTGTCGGAAGGGCGGGCCTGCTCATCCTGGCGAGAATTTGCTTTTCTGCTTTATAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp TTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTaGCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGG +
Preference number: 3 (lower is better)
Translates to: FPAVICPEQPHQ*PRVSGFISGFW
Trigger: CCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
3UTR GCA 72 bp ACAGAAAATGCCAGGACTTGCAGTCACTCTTCACATTaGCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCC +
Preference number: 3 (lower is better)
Translates to: TENARTCSHSSH*PSAPVSILGPS
Trigger: GGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAGTGACTGCAAGTCCTGGCATTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp CAAAACGGCCCAGGGGCCAGAAGCTTCCTTCCACTTTaGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: QNGPGARSFLPL*GTLILFCSGGS
Trigger: AGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGAAGCTTCTGGCCCCTGGGCCGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp ATTAGGGCCACTTCTGTTTCCAGATGGCTGACCTACTaGTACCACCGTGATGAGTCAGCGCTGTGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: IRATSVSRWLTY*YHRDESALCLR
Trigger: CCTGAGGCACAGCGCTGACTCATCACGGTGGTACCAGTAGGTCAGCCATCTGGAAACAGAAGTGGCCCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp TCTTCTGAGTGTTCTAAGATAGGGGCATCACTGTCATaGCCTGAAGCGCCTCTGCGTGGTGAGGAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: SSECSKIGASLS*PEAPLRGEESL
Trigger: GAGGCTCTCCTCACCACGCAGAGGCGCTTCAGGTCATGACAGTGATGCCCCTATCTTAGAACACTCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp TTGGCCCAATTAGGGCCACTTCTGTTTCCAGATGGCTaGCCTACTGGTACCACCGTGATGAGTCAGCGCTGT +
Preference number: 3 (lower is better)
Translates to: LAQLGPLLFPDG*PTGTTVMSQRC
Trigger: ACAGCGCTGACTCATCACGGTGGTACCAGTAGGTCAGCCATCTGGAAACAGAAGTGGCCCTAATTGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp CTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATaGACTCTGGTAAGCTTCTTGGATTTACTTCCCAAG +
Preference number: 3 (lower is better)
Translates to: LAAVRTKPAQWR*TLVSFLDLLPK
Trigger: CTTGGGAAGTAAATCCAAGAAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp GTCACCAAGTTTGGGTCACCCCACTTCCCCAACATGTaGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCA +
Preference number: 3 (lower is better)
Translates to: VTKFGSPHFPNM*LLGTADFVAEA
Trigger: TGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCACATGTTGGGGAAGTGGGGTGACCCAAACTTGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGCAGCGTGAGGCTTTaGGAGGCACAAGGCCATTCG +
Preference number: 3 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCCSVRL*EAQGHS
Trigger: CGAATGGCCTTGTGCCTCCAAAAGCCTCACGCTGCA...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp CTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTaGGTCTCCCCGTTTTCCCTACAAAGGCCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: LFLICPKSESGS*VSPFSLQRPGS
Trigger: GGAACCTGGCCTTTGTAGGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp GAGTCAGCGCTGTGCCTCAGGTGGGGCCCTAGTGGATaGATGATCCTCCGCAATTTTGCTGAAAGGGATTTA +
Preference number: 3 (lower is better)
Translates to: ESALCLRWGPSG*MILRNFAERDL
Trigger: TAAATCCCTTTCAGCAAAATTGCGGAGGATCATTCATCCACTAGGGCCCCACCTGAGGCACAGCGCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CCA 72 bp CTGTACCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTaGCGATGGACTCTGGTAAGCTTCTTGGATTTACTT +
Preference number: 3 (lower is better)
Translates to: LYLAAVRTKPAQ*RWTLVSFLDLL
Trigger: AAGTAAATCCAAGAAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCACAGGAGCAGCAAAGTaGCAGCGTGAGGCTTTTGGA +
Preference number: 3 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFTGAAK*QREAFG
Trigger: TCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGT...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCGGAGAGGGCTCACCATaGCTTCTCTTTTCATTCATT +
Preference number: 3 (lower is better)
Translates to: PCSTFHLQTKAATENGRLGEGSP*LLFSFI
Trigger: AATGAATGAAAAGAGAAGCAATGGTGAGCCCTCTCC...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGATCCTCAATTAGACAATaGTTTTGCCAGCCCCTTTGT +
Preference number: 3 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRSSIRQ*FCQPLC
Trigger: ACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGA...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp TGGACTCTGGTAAGCTTCTTGGATTTACTTCCCAAGTaGAGTGCGGGGTGGAGCAAACCTCTAGCTCTGAGG +
Preference number: 3 (lower is better)
Translates to: WTLVSFLDLLPK*SAGWSKPLALR
Trigger: CCTCAGAGCTAGAGGTTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATCCAAGAAGCTTACCAGAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp CAGCGCTGTGCCTCAGGTGGGGCCCTAGTGGATGAATaGTCCTCCGCAATTTTGCTGAAAGGGATTTATTAC +
Preference number: 3 (lower is better)
Translates to: QRCASGGALVDE*SSAILLKGIYY
Trigger: GTAATAAATCCCTTTCAGCAAAATTGCGGAGGATCATTCATCCACTAGGGCCCCACCTGAGGCACAGCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp TCTGGTAAGCTTCTTGGATTTACTTCCCAAGTGAAGTaGGGGGTGGAGCAAACCTCTAGCTCTGAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: SGKLLGFTSQVK*GVEQTSSSEAG
Trigger: ACCTGCCTCAGAGCTAGAGGTTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATCCAAGAAGCTTACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp CAGGACAAGATGATACAGCCTAGTTTGAGTCCCATCTaGGACACGGTAGTGGGATTCACCATGGGCTTCAGA +
Preference number: 3 (lower is better)
Translates to: QDKMIQPSLSPI*DTVVGFTMGFR
Trigger: TCTGAAGCCCATGGTGAATCCCACTACCGTGTCTCAGATGGGACTCAAACTAGGCTGTATCATCTTGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
3UTR CCA 72 bp TTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTaGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATT +
Preference number: 3 (lower is better)
Translates to: FRWFSRCSCQWA*PAIPYKAEKQI
Trigger: AATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGGAGAGGGCTCACCATaGCTTCTCTTTTCATTCATT +
Preference number: 3 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPGEGSP*LLFSFI
Trigger: AATGAATGAAAAGAGAAGCAATGGTGAGCCCTCTCC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGGGGGTTACAGGAGGGTaGAGTTATTTGCTGCCTACA +
Preference number: 3 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGGVTGG*SYLLPT
Trigger: TGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCC...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCGAGTCTTACCACATTTaGGCCCAATTAGGGCCACTT +
Preference number: 3 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPESYHI*AQLGPL
Trigger: AAGTGGCCCTAATTGGGCCAAAATGTGGTAAGACTC...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp GATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCTaGTCAATCAACCTATGTCACCAAGTTTGGGTCACC +
Preference number: 3 (lower is better)
Translates to: DLHELLLVRLRV*SINLCHQVWVT
Trigger: GGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGAACCGCAGACTTTGTaGCTGAGGCAACCCAGGCTA +
Preference number: 3 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHEPQTL*LRQPRL
Trigger: TAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTAGAAAATGCCAGGACTaGCAGTCACTCTTCACATTG +
Preference number: 3 (lower is better)
Translates to: WLLGTADFVAEATQAKFLRKCQD*QSLFTL
Trigger: CAATGTGAAGAGTGACTGCAAGTCCTGGCATTTTCT...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp TGGGGTCGTTATAATCCTCAGGGGTTACAGGAGGGTTaGGTTATTTGCTGCCTACAATTGAATTTCCCACCC +
Preference number: 3 (lower is better)
Translates to: WGRYNPQGLQEG*VICCLQLNFPP
Trigger: GGGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGAGGATTATAACGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGATTTGCTGCCTACAATaGAATTTCCCACCCCAAGGT +
Preference number: 3 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTICCLQ*NFPPQG
Trigger: ACCTTGGGGTGGGAAATTCAATTGTAGGCAGCAAAT...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR-3UTR CAA 90 bp TTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCACTTACTATCAGGTCTTCCAGAAACCTACTaGCACTTCTCAGGTGGTACC +
Preference number: 3 (lower is better)
Translates to: FIYPQLSLAIATHHLLSGLPETY*HFSGGT
Trigger: GGTACCACCTGAGAAGTGCAAGTAGGTTTCTGGAAG...ACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR TCA 72 bp AGACTGAGTGCAACTAAAACGATGGTTGTTTCATGTTaGATTTCCCTCGGATGCAGACGCTGCCCTTCAGTA +
Preference number: 3 (lower is better)
Translates to: RLSATKTMVVSC*ISLGCRRCPSV
Trigger: TACTGAAGGGCAGCGTCTGCATCCGAGGGAAATTCAACATGAAACAACCATCGTTTTAGTTGCACTCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR TCA 72 bp CCTCTACCCTCAACCAAATGCAATTTCTATCTCCTCTaGTCTTCCAGAAACCTACTTGCACTTCTCAGGTGG +
Preference number: 3 (lower is better)
Translates to: PLPSTKCNFYLL*SSRNLLALLRW
Trigger: CCACCTGAGAAGTGCAAGTAGGTTTCTGGAAGATCAGAGGAGATAGAAATTGCATTTGGTTGAGGGTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR GCA 72 bp GCCACAAGATTACGTCTACAGTGTTGTGGAAATCACTaGAAAGAATGCCATCTCCAAAACACTCACCACCAG +
Preference number: 3 (lower is better)
Translates to: ATRLRLQCCGNH*KECHLQNTHHQ
Trigger: CTGGTGGTGAGTGTTTTGGAGATGGCATTCTTTGCAGTGATTTCCACAACACTGTAGACGTAATCTTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR CAA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAAAACTGCCAGGAATCTaGATTCTGGGATGGTTAGTA +
Preference number: 3 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIKLPGI*ILGWLV
Trigger: TACTAACCATCCCAGAATCAAGATTCCTGGCAGTTT...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR CAA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGGGAGGGTTGAGTTATTaGCTGCCTACAATTGAATTT +
Preference number: 3 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKGGLSY*LPTIEF
Trigger: AAATTCAATTGTAGGCAGCAAATAACTCAACCCTCC...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp CAATTTCTATCTCCTCTGATCTTCCAGAAACCTACTTaGACTTCTCAGGTGGTACCTGCCACATTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: QFLSPLIFQKPT*TSQVVPATFFD
Trigger: ATCAAAGAATGTGGCAGGTACCACCTGAGAAGTGCAAGTAGGTTTCTGGAAGATCAGAGGAGATAGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR-3UTR CAA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGTCTAATAAGCCTTCCTaGGAGCCAAATGGGCAAAAA +
Preference number: 3 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTSNKPS*EPNGQK
Trigger: TTTTTGCCCATTTGGCTCCAAGGAAGGCTTATTAGA...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR GCA 72 bp AAAGAATTTCTAGCTATTCCTATTGATAAGTCCAAATaGAACTTAATTCAGGACATCTTTCCCTCTACCCTC +
Preference number: 3 (lower is better)
Translates to: KEFLAIPIDKSK*NLIQDIFPSTL
Trigger: GAGGGTAGAGGGAAAGATGTCCTGAATTAAGTTGCATTTGGACTTATCAATAGGAATAGCTAGAAATTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCACTGCTCCGAAGGACCTaGTGCTGCTGTCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSLLRRT*CCCPTV
Trigger: CACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAG...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCATGGAGCCTAGGAGCATaGGATGGCCTTCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSWSLGA*DGLPNR
Trigger: CCTGTTGGGAAGGCCATCGCATGCTCCTAGGCTCCA...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCAGACAGTGACAGCCTCTaGACGAGGCGCCGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSDSDSL*TRRRQN
Trigger: ATTTTGACGGCGCCTCGTTCAGAGGCTGTCACTGTC...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGAGAGCCGAGGACAGTaGCAGCCTCTGAACGAGGCG +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRESRGQ*QPLNEA
Trigger: CGCCTCGTTCAGAGGCTGTCACTGTCCTCGGCTCTC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCACATTTGTCCCAAGAGTaGGTCTGGCTCCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSHLSQE*VWLLSL
Trigger: GAGACTCAGGAGCCAGACTCACTCTTGGGACAAATG...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGCAGCAGAGTCTGGGTaGCAACCAGTGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRAAESG*QPVRLP
Trigger: GGGGAGCCTCACTGGTTGGCACCCAGACTCTGCTGC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCATGTGAGAACAAAGCCTaGGCAGTGGCGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSCENKA*AVAMDS
Trigger: AGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACA...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGCCCACTGCAGGGCGTTaGTCTGTACCTGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAPTAGR*SVPGRC
Trigger: ACAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGG...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCAGCTTCCCACTCACTATaGCTCCATCAAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSASHSL*LHQTEA
Trigger: GGCCTCTGTTTGATGGAGCCATAGTGAGTGGGAAGC...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGATACAGCAGGTCCATaGGGCGCAGGTGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAADTAGP*GAGGAT
Trigger: GGTGGCACCACCTGCGCCCCATGGACCTGCTGTATC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGCAAGGGCCCCTGGATaGCATGACTGCTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAARAPG*HDCWET
Trigger: GGTTTCCCAGCAGTCATGTCATCCAGGGGCCCTTGC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGGGGCTCTGGCCGAATaGTGCTCCTCTAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRGALAE*CSSRTA
Trigger: AGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGCCCC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGATGAGTCAGCGCTGTaGCTCAGGTGGGGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAADESAL*LRWGPS
Trigger: ACTAGGGCCCCACCTGAGGCACAGCGCTGACTCATC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGCTCGGTGTGGCTGCCTaGGCCGCGGTGTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRLGVAA*AAVCPG
Trigger: ACCAGGACACACCGCGGCCCAGGCAGCCACACCGAG...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGCAGCCCTGCTGGCGTTaGTGCACGTGGCACATACAA +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRQPCWR*CTWHIQ
Trigger: TTGTATGTGCCACGTGCATCAACGCCAGCAGGGCTG...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCACAGAACCTGCTCTTCTaGACAGTTTGTCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSQNLLF*TVCLKC
Trigger: GCACTTCAGACAAACTGTGCAGAAGAGCAGGTTCTG...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGTCAGGCGCTCTCTCCTaGACAGCACCACCACCAACA +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRSGALS*TAPPPT
Trigger: TGTTGGTGGTGGTGCTGTGCAGGAGAGAGCGCCTGA...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGAATGGCTTTTGTCCTaGTCCGTGGGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAEWLLS*SVGPPP
Trigger: TGGTGGTGGGCCCACGGAGCAGGACAAAAGCCATTC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGTCGGTCACATCTGGGTaGCTCCGCCAGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRSVTSG*LRQLRE
Trigger: TTCTCTCAGCTGGCGGAGCCACCCAGATGTGACCGA...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGTCTGCCATGGGCCCATaGACAGCTCTGCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRSAMGP*TALPHW
Trigger: CCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGA...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAGCTGTGGACACGGGGTaGAGAAGGACACTCACGGGC +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVAVDTG*RRTLTG
Trigger: GCCCGTGAGTGTCCTTCTCCACCCCGTGTCCACAGC...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTATCCATGGGGCGCAGGTaGTGCCACCTGAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVSMGRR*CHLRKV
Trigger: GACCTTCCTCAGGTGGCACCACCTGCGCCCCATGGA...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTATGTGCTTTCTCGGTGTaGCTGCCTGGGCCGCGGTGT +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVCAFSV*LPGPRC
Trigger: ACACCGCGGCCCAGGCAGCCACACCGAGAAAGCACA...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGCAGCAGGATCAAGCCTaGGTGATGGTGGCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRQQDQA*VMVAKL
Trigger: TAGCTTGGCCACCATCACTCAGGCTTGATCCTGCTG...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGCCTGGCCCTGCCTaGGGCCAGCGAGTCTTACCA +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFWPGPA*GQRVLP
Trigger: TGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCA...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAGCAGGTGGTGCCACCTaGGGAAGGTCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVAGGAT*GRSGRQ
Trigger: CTGTCTTCCTGACCTTCCTCAGGTGGCACCACCTGC...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACGCAGCAGAGTCTGGGTaGCAACCAGTGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHAAESG*QPVRLP
Trigger: GGGGAGCCTCACTGGTTGGCACCCAGACTCTGCTGC...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGACCGTCTGCCCGGTGCTaGCATTGCGCTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRPSARC*HCAEGH
Trigger: GTGGCCTTCAGCGCAATGGCAGCACCGGGCAGACGG...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTCCGTCTGCCCGGTGCTaGCATTGCGCTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFPSARC*HCAEGH
Trigger: GTGGCCTTCAGCGCAATGGCAGCACCGGGCAGACGG...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTATGGGGCGCAGGTGGTaGCACCTGAGGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLMGRRW*HLRKVR
Trigger: CCTGACCTTCCTCAGGTGGCACCACCTGCGCCCCAT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTACGCGGTGTGTCCTGGTaGACACACGTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVRGVSW*THVCKV
Trigger: CACCTTGCAGACGTGTGTGCACCAGGACACACCGCG...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCATGGATCTTGGGTGACTaGATGTTATTCACATCTCCG +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSWILGD*MLFTSP
Trigger: CGGAGATGTGAATAACATCCAGTCACCCAAGATCCA...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGGCGTCTGGTCATCATaGCACAGATCAGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAGVWSS*HRSACR
Trigger: CCTACAGGCTGATCTGTGCCATGATGACCAGACGCC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGGCACATACAAGGCTTaGCAGCAGCTTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRGTYKA*QQLPTH
Trigger: GTGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGGGTCAGCACTCAGACTaGAGGCCAGGGCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRGQHSD*RPGPLA
Trigger: AGCAAGGGGCCCTGGCCTCCAGTCTGAGTGCTGACC...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCGGTGGCTCCGCCAGCTaGGAGAAAAGGACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLGGSAS*EKRTSP
Trigger: TGGGGAGGTCCTTTTCTCTCAGCTGGCGGAGCCACC...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCGAGAGCCGAGGACAGTaGCAGCCTCTGAACGAGGCG +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLESRGQ*QPLNEA
Trigger: CGCCTCGTTCAGAGGCTGTCACTGTCCTCGGCTCTC...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGATGGCCTCTTTCACCTaGGGGTGGCTTGTACACTGT +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAMASFT*GWLVHC
Trigger: ACAGTGTACAAGCCACCCTCAGGTGAAAGAGGCCAT...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGTGCTGCCATTGCGCTaGAGGCCACCCATGAACCCA +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLVLPLR*RPPMNP
Trigger: TGGGTTCATGGGTGGCCTTCAGCGCAATGGCAGCAC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTATCTGGTAGAGTGGGATaGGGCACTTCACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVSGRVG*GTSQPC
Trigger: GCAGGGCTGTGAAGTGCCTCATCCCACTCTACCAGA...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACAAATTCTCGCCAGGATaGGCAGGCCCGCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHKFSPG*AGPPFR
Trigger: TCGGAAGGGCGGGCCTGCTCATCCTGGCGAGAATTT...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCGGGCCCCCGTTCCGCTaGGGGAGTAGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPGPPFR*GSSWER
Trigger: CCTCTCCCAGCTACTCCCTCAGCGGAACGGGGGCCC...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000430436.5
CDS-3UTR GCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTCCGTCTGCCCGGTGCTaGCATTGCGCTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPPSARC*HCAEGH
Trigger: GTGGCCTTCAGCGCAATGGCAGCACCGGGCAGACGG...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCGGGCCGTCTGCCCGGTaGTGCCATTGCGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVGPSAR*CHCAEG
Trigger: GCCTTCAGCGCAATGGCAGCACCGGGCAGACGGCCC...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGACCCACTGCAGGGCGTTaGTCTGTACCTGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRPTAGR*SVPGRC
Trigger: ACAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGG...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGTTTGGCAGAACGTCCTaGCGTCTGGTCATCATGGCA +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRFGRTS*RLVIMA
Trigger: TGCCATGATGACCAGACGCCAGGACGTTCTGCCAAA...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGGCCGCGGTGTGTCCTaGTGCACACACGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFGRGVS*CTHVCK
Trigger: CTTGCAGACGTGTGTGCACCAGGACACACCGCGGCC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGACGGTGGTTCCTTTCTaGGGATCTAGAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRTVVPF*GSRTQP
Trigger: AGGCTGTGTTCTAGATCCTCAGAAAGGAACCACCGT...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTGCTGCTGTCCCACTGTaGGATGGCCAGATCCGGCTG +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTAAVPL*DGQIRL
Trigger: CAGCCGGATCTGGCCATCTCACAGTGGGACAGCAGC...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGTCCCCCACCAGCATTaGGAAGCCAGGAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLVPHQH*EARKTQ
Trigger: CTGGGTTTTCCTGGCTTCTCAATGCTGGTGGGGGAC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGCTGAAGGCCACCCATaGACCCACAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLAEGHP*THSGWR
Trigger: TCTCCACCCACTGTGGGTTCATGGGTGGCCTTCAGC...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR TCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGCCCTTCAGCCCCCGTaGGTATCCTGGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPALQPP*VSWALP
Trigger: GGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGC...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTACTGCTCCGAAGGACCTaGTGCTGCTGTCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLLLRRT*CCCPTV
Trigger: CACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAG...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTTCTTCCTCACAGGTCTaGCATGGGCCCATGGACAGC +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLSSSQV*HGPMDS
Trigger: GCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGA...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGTCCACTGGGGAGGGCTaGCCTTGGCTGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLSTGEG*PWLVTF
Trigger: GAAAGTCACCAGCCAAGGGCAGCCCTCCCCAGTGGA...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTCTCACAGGTCTGCCATaGGCCCATGGACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFLTGLP*AHGQLC
Trigger: GCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAG...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAAGGTGGTTCACCAGGTaGGCCATCACCATTCGAGCA +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVRWFTR*AITIRA
Trigger: TGCTCGAATGGTGATGGCCCACCTGGTGAACCACCT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTACCCTGCGGTAGTCTCTaGAGTGTTCAGACCAGACGA +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVPCGSL*SVQTRR
Trigger: TCGTCTGGTCTGAACACTCCAGAGACTACCGCAGGG...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAAGAGGCTGGAGTTGCTaGGTCTTCGGTCCGACAAGG +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLRGWSC*VFGPTR
Trigger: CCTTGTCGGACCGAAGACTCAGCAACTCCAGCCTCT...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGACATAACCTCGTGTTaGCAAGAGAATCCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRDITSC*QENPLY
Trigger: GTACAGCGGATTCTCTTGTCAACACGAGGTTATGTC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGACAGCCCTGCTGGCGTTaGTGCACGTGGCACATACAA +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRQPCWR*CTWHIQ
Trigger: TTGTATGTGCCACGTGCATCAACGCCAGCAGGGCTG...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTATCTGGTAGAGTGGGATaGGGCACTTCACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLSGRVG*GTSQPC
Trigger: GCAGGGCTGTGAAGTGCCTCATCCCACTCTACCAGA...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCCTCTGCCCCCTCCCTaGAAGCGCAGAATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLPLPPP*KRRIFS
Trigger: GGAAAAGATTCTGCGCTTTCAGGGAGGGGGCAGAGG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGAGTGAGTCTGGCTCCTaGGTCTCCCCGTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRSESGS*VSPFSL
Trigger: TAGGGAAAACGGGGAGACTCAGGAGCCAGACTCACT...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTAGCAGCGCCCGCAGGTaGTTCAGGCGGGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPASSARR*FRRVST
Trigger: CGTGCTGACCCGCCTGAAGCACCTGCGGGCGCTGCT...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGTACACACAGAGGTTTaGTCGGATCCAAGCTACCAT +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAVHTEV*SDPSYH
Trigger: ATGGTAGCTTGGATCCGAGCAAACCTCTGTGTGTAC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGACACTCACGGGCAATaGCATGCACCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLDTHGQ*HAPVQE
Trigger: CTCTTGGACTGGTGCATGGCATTGCCCGTGAGTGTC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAAGAGCTCTTCACATTTaGCAGTGGCAGGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVRALHI*QWQEGV
Trigger: GACCCCTTCCTGCCACTGGCAAATGTGAAGAGCTCT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCGGGCCGTCTGCCCGGTaGTGCCATTGCGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCGPSAR*CHCAEG
Trigger: GCCTTCAGCGCAATGGCAGCACCGGGCAGACGGCCC...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCAGACCTGAAGCGCCTCTaGGTGGTGAGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPDLKRL*VVRRAS
Trigger: AGAGGCTCTCCTCACCACGCAGAGGCGCTTCAGGTC...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGTGGAGCCTAGGAGCATaGGATGGCCTTCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLWSLGA*DGLPNR
Trigger: CCTGTTGGGAAGGCCATCGCATGCTCCTAGGCTCCA...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTCTTTCTCGGTGTGGCTaGCTGGGCCGCGGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPLSRCG*LGRGVS
Trigger: GGACACACCGCGGCCCAGGCAGCCACACCGAGAAAG...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCGGAGAGTCGGGTGGCTaGCATCAGTGGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLGESGG*HQWRCV
Trigger: CACACATCTCCACTGATGGCAGCCACCCGACTCTCC...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGTCGGTCACATCTGGGTaGCTCCGCCAGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLSVTSG*LRQLRE
Trigger: TTCTCTCAGCTGGCGGAGCCACCCAGATGTGACCGA...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGCAGAAAACTCTGGCATaGATCTTGGGTGACTGGATG +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRQKTLA*ILGDWM
Trigger: CATCCAGTCACCCAAGATCCATGCCAGAGTTTTCTG...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCCTCTAGGACTGCTGTaGACACGGGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLPLGLL*TRGGEG
Trigger: TCCTTCTCCACCCCGTGTCCACAGCAGTCCTAGAGG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCACCAGCAAGGGGGCTCTaGCCGAATGCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPPARGL*PNAAPL
Trigger: TAGAGGAGCAGCATTCGGCCAGAGCCCCCTTGCTGG...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAGGGGAGGGCTGCCCTTaGCTGGTGACTTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLGEGCP*LVTFIA
Trigger: TGCAATGAAAGTCACCAGCCAAGGGCAGCCCTCCCC...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGCTCGGTGTGGCTGCCTaGGCCGCGGTGTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQLGVAA*AAVCPG
Trigger: ACCAGGACACACCGCGGCCCAGGCAGCCACACCGAG...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCGGTCAGCACTCAGACTaGAGGCCAGGGCCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFGQHSD*RPGPPF
Trigger: GAACGGGGGCCCTGGCCTCCAGTCTGAGTGCTGACC...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430436.5
CDS-3UTR TCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCAAGAGGCTGGAGTTGCTaGGTCTTCGGTCCGACAAGG +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPRGWSC*VFGPTR
Trigger: CCTTGTCGGACCGAAGACTCAGCAACTCCAGCCTCT...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGCTCAGTTGTAACCAATaGCGGGCATCAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRLSCNQ*RASASA
Trigger: GGCTGATGCTGATGCCCGTCATTGGTTACAACTGAG...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGAGAGAGCCCACTGGTaGTCCCCCTACCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPERAHW*SPYRSF
Trigger: GAAGGACCGGTAGGGGGATCACCAGTGGGCTCTCTC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGGAGAGAGCCCACTGGTaGTCCCCCTACCGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVERAHW*SPYRSF
Trigger: GAAGGACCGGTAGGGGGATCACCAGTGGGCTCTCTC...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTTTTAATCCGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTTGGGCGCTGAAGGCCACCCATaGACCCACAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VLIRSAEGVAGRGRKDLGAEGHP*THSGWR
Trigger: TCTCCACCCACTGTGGGTTCATGGGTGGCCTTCAGC...GCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCGTGCTGCCATTGCGCTaGAGGCCACCCATGAACCCA +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVVLPLR*RPPMNP
Trigger: TGGGTTCATGGGTGGCCTTCAGCGCAATGGCAGCAC...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGACTTCGCGGTGGTTCTaGATTATTGCTTCGAGATAC +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRTSRWF*IIASRY
Trigger: GTATCTCGAAGCAATAATTCAGAACCACCGCGAAGT...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTTGTACCTGGCCGCTGTaGGAACAAAGCCTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPCTWPL*EQSLRS
Trigger: ACTGCGCAGGCTTTGTTCTCACAGCGGCCAGGTACA...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGGCCCTTCAGCCCCCGTaGGTATCCTGGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGALQPP*VSWALP
Trigger: GGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGC...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTCTGTTTCCAGATGGCTaGCCTACTGGTACCACCGTG +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFLFPDG*PTGTTV
Trigger: CACGGTGGTACCAGTAGGTCAGCCATCTGGAAACAG...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGTGGCCTGGCCCTGCCTaGGGCCAGCGAGTCTTACCA +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQWPGPA*GQRVLP
Trigger: TGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCA...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCATCAGACCTCCACATaGCACCGATACAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLHQTST*HRYSRS
Trigger: GGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGTCATATGGACAGACTaGGTGCAACTAAAACGATGG +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAVIWTD*VQLKRW
Trigger: CCATCGTTTTAGTTGCACTCAGTCTGTCCATATGAC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCACTTTTCCACTCCCGGTaGTCCAGACGTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPLFHSR*SRRGGT
Trigger: AGTGCCACCACGTCTGGAGCACCGGGAGTGGAAAAG...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCACTCCGAAGGACCTGCTaGTGCTGTCCCACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPLRRTC*CCPTVR
Trigger: TCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAG...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCACATTTTCCTTGTGTCTaGTGCAAATCATCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSHFPCV*CKSSFK
Trigger: TTTGAAAGATGATTTGCAGCAGACACAAGGAAAATG...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGGCCACGAGGATTTCTaGCATTTTCCGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLGHEDF*HFPRQR
Trigger: TCTCTGCCTCGGAAAATGGCAGAAATCCTCGTGGCC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGATGGGGCGCAGGTGGTaGCACCTGAGGAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVMGRRW*HLRKVR
Trigger: CCTGACCTTCCTCAGGTGGCACCACCTGCGCCCCAT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGATAGCAGAAAACTCTaGCATGGATCTTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRDSRKL*HGSWVT
Trigger: AGTCACCCAAGATCCATGCCAGAGTTTTCTGCTATC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGAAAGAAAAGCAACTGTaGCCACGAGGATTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAKEKQL*PRGFLP
Trigger: TGGCAGAAATCCTCGTGGCCACAGTTGCTTTTCTTT...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCGCTGTGGACACGGGGTaGAGAAGGACACTCACGGGC +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPAVDTG*RRTLTG
Trigger: GCCCGTGAGTGTCCTTCTCCACCCCGTGTCCACAGC...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCAGGTGGTTCACCAGGTaGGCCATCACCATTCGAGCA +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLRWFTR*AITIRA
Trigger: TGCTCGAATGGTGATGGCCCACCTGGTGAACCACCT...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTCCCATGAACCCACAGTaGGTGGAGAGATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPPMNPQ*VERSTS
Trigger: GGAGGTGGATCTCTCCACCCACTGTGGGTTCATGGG...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGAAGCTCTGGTAGAGTaGGATGAGGCACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLEALVE*DEALHS
Trigger: GCTGTGAAGTGCCTCATCCCACTCTACCAGAGCTTC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCACCTACAGGGGACTCTaGAGCCTAGGAGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLTYRGL*SLGACD
Trigger: ATCGCATGCTCCTAGGCTCCAGAGTCCCCTGTAGGT...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGGCCGCGGTGTGTCCTaGTGCACACACGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALGRGVS*CTHVCK
Trigger: CTTGCAGACGTGTGTGCACCAGGACACACCGCGGCC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTATGTGCTTTCTCGGTGTaGCTGCCTGGGCCGCGGTGT +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALCAFSV*LPGPRC
Trigger: ACACCGCGGCCCAGGCAGCCACACCGAGAAAGCACA...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CAA 72 bp CGTCTCAGCCTAGCGCCTGAAGCCGGCATGCGCCTTTaGTGTGGATGTGGTCTGTGTTGTTTTGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RLSLAPEAGMRL*CGCGLCCFEPW
Trigger: CCAAGGCTCAAAACAACACAGACCACATCCACACAAAAGGCGCATGCCGGCTTCAGGCGCTAGGCTGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CAA 72 bp CTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTaGGCCCAATTAGGGCCACTTCTGTTTCCAGATGGC +
Preference number: 4 (lower is better)
Translates to: LALPEASESYHI*AQLGPLLFPDG
Trigger: GCCATCTGGAAACAGAAGTGGCCCTAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAGGCATGGATCTTGGGTaGCTGGATGTTATTCACATC +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVGMDLG*LDVIHI
Trigger: GATGTGAATAACATCCAGTCACCCAAGATCCATGCC...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTGACAGTGACAGCCTCTaGACGAGGCGCCGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTDSDSL*TRRRQN
Trigger: ATTTTGACGGCGCCTCGTTCAGAGGCTGTCACTGTC...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTAGTTTGAGTCCCATCTaGGACACGGTAGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLSLSPI*DTVVGF
Trigger: GAATCCCACTACCGTGTCTCAGATGGGACTCAAACT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGGGGCATCACTGTCATaGCCTGAAGCGCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALGASLS*PEAPLR
Trigger: ACGCAGAGGCGCTTCAGGTCATGACAGTGATGCCCC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGAGCAAAGTTGCAGCGTaGGGCTTTTGGAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLSKVAA*GFWRHK
Trigger: CTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCT...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCTTTCTGAGGCCTGTGTaGGGCCTCTCTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVFLRPV*GLSGQQ
Trigger: CTGTTGCCCAGAGAGGCCTCACACAGGCCTCAGAAA...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTCTCTTCGCTGCTGACTaGTTTCTCTGCTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTLFAAD*FLCCRT
Trigger: CGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAG...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTACCCATCATAAGCCCTaGGTTAGGGGCTGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTTHHKP*VRGCVS
Trigger: AGAGACGCAGCCCCTAACTCAGGGCTTATGATGGGT...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTCTCTGTGGATCTGCATaGGCTCTTGCTTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLLCGSA*ALACKA
Trigger: AGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAG...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGGCAGGTGGTGCCACCTaGGGAAGGTCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVAGGAT*GRSGRQ
Trigger: CTGTCTTCCTGACCTTCCTCAGGTGGCACCACCTGC...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGATGGTTGTTTCATGTTaGATTTCCCTCGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRMVVSC*ISLGCR
Trigger: TCTGCATCCGAGGGAAATTCAACATGAAACAACCAT...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGCAGCCTTTGCCTCGTTaGTTCTTTTCCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAQPLPR*FFSFCS
Trigger: TGAACAAAAGGAAAAGAAGCAACGAGGCAAAGGCTG...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGCGGGGATGTCGGAGGTaGTGCTGCTCCGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSRGCRR*CCSEGP
Trigger: AGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCG...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGGCCACGAGGATTTCTaGCATTTTCCGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFGHEDF*HFPRQR
Trigger: TCTCTGCCTCGGAAAATGGCAGAAATCCTCGTGGCC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTTCACGGGCAATGCCATaGACCAGTCCAAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTSRAMP*TSPRGR
Trigger: TCTGCCTCTTGGACTGGTGCATGGCATTGCCCGTGA...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTGACACTCACGGGCAATaGCATGCACCAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTDTHGQ*HAPVQE
Trigger: CTCTTGGACTGGTGCATGGCATTGCCCGTGAGTGTC...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGGAGCAGCCACACCAGTaGCCACGTGTCAGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GRPAEGTSTATKFPGDSGEQPHQ*PRVSGF
Trigger: GAACCCACTGACACGTGGGCACTGGTGTGGCTGCTC...CCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTAGAAACAACTTGGGGTaGAGAAGCAAGCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLRNNLG*RSKLPS
Trigger: AGAGGGCAGCTTGCTTCTGCACCCCAAGTTGTTTCT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGCTGTCCCTTCCCACTaGAGGGCGTTGCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALAVPSH*RALLCT
Trigger: GGTACAGAGCAACGCCCTGCAGTGGGAAGGGACAGC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCCTGCGTCTCTCGTGCTaGTGTCCCTTCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPLRLSC*CPFPLQ
Trigger: CTGCAGTGGGAAGGGACAGCAGCACGAGAGACGCAG...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCACTGCGTCTCTCGTGCTaGTGTCCCTTCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPLRLSC*CPFPLQ
Trigger: CTGCAGTGGGAAGGGACAGCAGCACGAGAGACGCAG...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCGAACTGGCCTGGCCCTaGCTGAGGCCAGCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCELAWP*LRPASL
Trigger: AAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGTTC...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTCGCGGTGTGTCCTGGTaGACACACGTCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPRGVSW*THVCKV
Trigger: CACCTTGCAGACGTGTGTGCACCAGGACACACCGCG...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCTTTCTCGGTGTGGCTaGCTGGGCCGCGGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVALSRCG*LGRGVS
Trigger: GGACACACCGCGGCCCAGGCAGCCACACCGAGAAAG...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGAGTTGTGTCACTGTTaGTACTTTCACTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRELCHC*YFHSSV
Trigger: GACAGAAGAGTGAAAGTACCAACAGTGACACAACTC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTGGCGTCTGGTCATCATaGCACAGATCAGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPGVWSS*HRSACR
Trigger: CCTACAGGCTGATCTGTGCCATGATGACCAGACGCC...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGGAGAAAAAGCGGGGTaGACAGTGCCTTATGATCGT +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLGEKAG*TVPYDR
Trigger: ACGATCATAAGGCACTGTCCACCCCGCTTTTTCTCC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCTCGGAGCCTTCCACATaGGCATTGTCATGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLSEPST*ALSWFS
Trigger: CGAGAACCATGACAATGCCCATGTGGAAGGCTCCGA...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGAAACAGCTGCAGGTTTaGACTTCTGAACACCTCAAA +
Preference number: 4 (lower is better)
Translates to: GACASSSSLLTDFSAAGRKQLQV*TSEHLK
Trigger: TTTGAGGTGTTCAGAAGTCCAAACCTGCAGCTGTTT...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGACTACCGGTCCTTCTGTaGGTGTCTGAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRLPVLL*VSEGRR
Trigger: TCTCCTACCTTCAGACACCCACAGAAGGACCGGTAG...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTCCCTGCGGTAGTCTCTaGAGTGTTCAGACCAGACGA +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPPCGSL*SVQTRR
Trigger: TCGTCTGGTCTGAACACTCCAGAGACTACCGCAGGG...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTCCCTGCGGTAGTCTCTaGAGTGTTCAGACCAGACGA +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTPCGSL*SVQTRR
Trigger: TCGTCTGGTCTGAACACTCCAGAGACTACCGCAGGG...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGGGTCAGCACTCAGACTaGAGGCCAGGGCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSGQHSD*RPGPLA
Trigger: AGCAAGGGGCCCTGGCCTCCAGTCTGAGTGCTGACC...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGTGCCCACGTGTCAGTaGGTTCATCTCTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLVPTCQ*VHLWFL
Trigger: CAAAAACCAGAGATGAACCCACTGACACGTGGGCAC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTATCTCTTCTGTTCAGGTaGTTCTCAAGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVSLLFR*FSRCSC
Trigger: ACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGA...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTATGTGCATGGCTCTGTaGATCTGCATGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLMCMAL*ICMSSC
Trigger: GCAAGAGCTCATGCAGATCCACAGAGCCATGCACAT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGGTAAAAGAGGTTAACTaGAGAGTCGGGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRVKEVN*RVGWLP
Trigger: TGGCAGCCACCCGACTCTCCAGTTAACCTCTTTTAC...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCGGCCCCTGGATGACATaGCTGCTGGGAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPGPWMT*LLGNQA
Trigger: TGCCTGGTTTCCCAGCAGTCATGTCATCCAGGGGCC...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGGTGGCTCCGCCAGCTaGGAGAAAAGGACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLGGSAS*EKRTSP
Trigger: TGGGGAGGTCCTTTTCTCTCAGCTGGCGGAGCCACC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTGCTGCTGTCCCACTGTaGGATGGCCAGATCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVAAVPL*DGQIRL
Trigger: CAGCCGGATCTGGCCATCTCACAGTGGGACAGCAGC...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAATGCACCAGGAAATCTaGGTTTGGCAGAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRMHQEI*VWQNVL
Trigger: CAGGACGTTCTGCCAAACTCAGATTTCCTGGTGCAT...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTATTACTCCTATCACATTaGTGGCCTCTTTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVLLLSH*WPLSPE
Trigger: CTCAGGTGAAAGAGGCCATCAATGTGATAGGAGTAA...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTGTCATAATCCGTGGATaGCAAGTCAGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPVIIRG*QVSQGQ
Trigger: CTGACCCTGGCTGACTTGTCATCCACGGATTATGAC...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGCAGGTTTGGACTTCTaGACACCTCAAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFAGLDF*TPQRTA
Trigger: AGCTGTCCTTTGAGGTGTTCAGAAGTCCAAACCTGC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCGCTGAAGGCCACCCATaGACCCACAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCAEGHP*THSGWR
Trigger: TCTCCACCCACTGTGGGTTCATGGGTGGCCTTCAGC...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGCCCTAGTGGATGAATaGTCCTCCGCAATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFALVDE*SSAILL
Trigger: CAGCAAAATTGCGGAGGATCATTCATCCACTAGGGC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAACACCCTCTGCTCATTaGACTTGTGAAGGAGTATGT +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVTPSAH*TCEGVC
Trigger: ACATACTCCTTCACAAGTGCAATGAGCAGAGGGTGT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGTTCGTCAAAAATACCTaGAACAAAGCCTGGACGCCG +
Preference number: 4 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRFVKNT*NKAWTP
Trigger: CGGCGTCCAGGCTTTGTTGCAGGTATTTTTGACGAA...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGCTCTGGCCGAATGCTaGTCCTCTAGGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALALAEC*SSRTAV
Trigger: CACAGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGGGGGCTCTGGCCGAATaGTGCTCCTCTAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQGALAE*CSSRTA
Trigger: AGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGCCCC...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATACCGTCTGCCCGGTGCTaGCATTGCGCTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIPSARC*HCAEGH
Trigger: GTGGCCTTCAGCGCAATGGCAGCACCGGGCAGACGG...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp GCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTTAATCCGTGGGCCGTCTGCCCGGTaGTGCCATTGCGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ARAPCSNIEMRPLRVLIRGPSAR*CHCAEG
Trigger: GCCTTCAGCGCAATGGCAGCACCGGGCAGACGGCCC...ACGGATTAAAACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR GCA 90 bp GTTTTAATCCGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTTGGGCTTTCCTGCTGTCATCTaGCCAGAGCAGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: VLIRSAEGVAGRGRKDLGFPAVI*PEQPHQ
Trigger: CTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAA...GCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTCGCAGAATCTTTTCCTaGTGTCATCTGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFRRIFS*CHLPRA
Trigger: TGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCG...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCAAGCAAGCTGCCCTCTaGCCCCTCCCTGAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPKQAAL*PLPESA
Trigger: TGCGCTTTCAGGGAGGGGGCAGAGGGCAGCTTGCTT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGAAGCAAGCTGCCCTCTaGCCCCTCCCTGAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSKQAAL*PLPESA
Trigger: TGCGCTTTCAGGGAGGGGGCAGAGGGCAGCTTGCTT...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGGTGAGGAGAGCCTCTaGTTAGTTAGCGGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALGEESL*LVSGRQ
Trigger: CTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGGACACTTCCTGTCCTaGAGGAACTTATGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRGHFLS*RNLCKD
Trigger: GTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGTCC...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTAGTCACTCTTCACATTaGCCTTCAGCCCCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPSHSSH*PSAPVS
Trigger: ACTCACGGGGGCTGAAGGGCAATGTGAAGAGTGACT...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAGTGGCCAAGCTATGCTaGCCAGATGTCTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLVAKLC*PDVWNH
Trigger: ATGATTCCAGACATCTGGGCAGCATAGCTTGGCCAC...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAGAACTGGCCTGGCCCTaGCTGAGGCCAGCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLEELAWP*LRPASL
Trigger: AAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGTTC...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAACGGTTCGGTCACATCTaGGTGGCTCCGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLERFGHI*VAPPAE
Trigger: CTCAGCTGGCGGAGCCACCCAGATGTGACCGAACCG...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGCGGTTCGGTCACATCTaGGTGGCTCCGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGRFGHI*VAPPAE
Trigger: CTCAGCTGGCGGAGCCACCCAGATGTGACCGAACCG...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTTGTCCCACTGTGAGATaGCCAGATCCGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPACPTVR*PDPAAG
Trigger: ACCTGCAGCCGGATCTGGCCATCTCACAGTGGGACA...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCTGCCATGGGCCCATaGACAGCTCTGCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFSAMGP*TALPHW
Trigger: CCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGA...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAGGAGAAAAAGCGGGGTaGACAGTGCCTTATGATCGT +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLGEKAG*TVPYDR
Trigger: ACGATCATAAGGCACTGTCCACCCCGCTTTTTCTCC...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGGGGGAGGGCTGCCCTTaGCTGGTGACTTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVGEGCP*LVTFIA
Trigger: TGCAATGAAAGTCACCAGCCAAGGGCAGCCCTCCCC...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTCCCATGAACCCACAGTaGGTGGAGAGATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPAPMNPQ*VERSTS
Trigger: GGAGGTGGATCTCTCCACCCACTGTGGGTTCATGGG...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTCAGACCAGACGATATaGACCTCGTCATTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFSDQTI*TSSFPK
Trigger: CTTGGGGAATGACGAGGTCCATATCGTCTGGTCTGA...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGTGCCCACGTGTCAGTaGGTTCATCTCTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFVPTCQ*VHLWFL
Trigger: CAAAAACCAGAGATGAACCCACTGACACGTGGGCAC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTAGGCTTCTTCAGGCCTaGGTGGCCAAGCAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPARLLQA*VAKQPE
Trigger: TTCAGGCTGCTTGGCCACCCAGGCCTGAAGAAGCCT...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCTCCATGGGGCGCAGGTaGTGCCACCTGAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFSMGRR*CHLRKV
Trigger: GACCTTCCTCAGGTGGCACCACCTGCGCCCCATGGA...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCGATACAGCAGGTCCATaGGGCGCAGGTGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFDTAGP*GAGGAT
Trigger: GGTGGCACCACCTGCGCCCCATGGACCTGCTGTATC...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCATATCTGGCTCCTCCATaGACACAGGTTTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPYLAPP*TQVCPG
Trigger: TCCAGGACAAACCTGTGTTCATGGAGGAGCCAGATA...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGACCCTGAGAAGAATCTaGGCACAGCGGCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSTLRRI*AQRLGD
Trigger: ATCCCCGAGCCGCTGTGCTCAGATTCTTCTCAGGGT...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTAATAGGCTGAGGCTCTaGAGAACTCGAATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLNRLRL*RTRILC
Trigger: ACACAGAATTCGAGTTCTTCAGAGCCTCAGCCTATT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCCTCAGTTGTAACCAATaGCGGGCATCAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVLSCNQ*RASASA
Trigger: GGCTGATGCTGATGCCCGTCATTGGTTACAACTGAG...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGACGAAGCTTTTTGGTaGGGGAATCATCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFDEAFW*GNHLSL
Trigger: CAGACTCAGATGATTCCCTCACCAAAAAGCTTCGTC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR TCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTAGCGCCTCTGCGTGGTaGGGAGAGCCTCTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVSASAW*GEPLLS
Trigger: ACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCT...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCGGGGCATCACTGTCATaGCCTGAAGCGCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFGASLS*PEAPLR
Trigger: ACGCAGAGGCGCTTCAGGTCATGACAGTGATGCCCC...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGTCTCAGCCTAGCGCCTaGAGCCGGCATGCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGSQPSA*SRHAPF
Trigger: AAAAGGCGCATGCCGGCTTCAGGCGCTAGGCTGAGA...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGTACCTGGCCGCTGTaGGAACAAAGCCTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCCTWPL*EQSLRS
Trigger: ACTGCGCAGGCTTTGTTCTCACAGCGGCCAGGTACA...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCAGGATCAAGCCTGAGTaGTGGTGGCCAAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVRIKPE*WWPSYA
Trigger: AGCATAGCTTGGCCACCATCACTCAGGCTTGATCCT...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGACCAAAGCTGCTACTaGGAATGGCAGGCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFDQSCY*EWQAQK
Trigger: TTTTTGAGCCTGCCATTCTCAGTAGCAGCTTTGGTC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTTGGGGCCCTAGTGGATaGATGATCCTCCGCAATTTT +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTWGPSG*MILRNF
Trigger: AAAATTGCGGAGGATCATTCATCCACTAGGGCCCCA...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTCTGTTTCCAGATGGCTaGCCTACTGGTACCACCGTG +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPALFPDG*PTGTTV
Trigger: CACGGTGGTACCAGTAGGTCAGCCATCTGGAAACAG...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCGGGGCAGTAGGCGCCTaGGCCACGCGAATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTGAVGA*ATRIKA
Trigger: TGCTTTGATTCGCGTGGCGCAGGCGCCTACTGCCCC...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTCAGGCGCTCTCTCCTaGACAGCACCACCACCAACA +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCSGALS*TAPPPT
Trigger: TGTTGGTGGTGGTGCTGTGCAGGAGAGAGCGCCTGA...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTACACACAGAGGTTTaGTCGGATCCAAGCTACCAT +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLVHTEV*SDPSYH
Trigger: ATGGTAGCTTGGATCCGAGCAAACCTCTGTGTGTAC...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGCGAAGGACCTGCTGCTaGTGTCCCACTGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSRRTCC*CPTVRW
Trigger: CCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCG...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCGGATGTCGGAGGTGCTaGTGCTCCGAAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFGCRRC*CSEGPA
Trigger: AGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCC...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTATTCAGCAGGGCTGCTaGTTCTTCGAACTAAGATTG +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLIQQGC*FFELRL
Trigger: CAATCTTAGTTCGAAGAAGCAGCAGCCCTGCTGAAT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCCAATTCAGCAGGGCTaGTGCTTCTTCGAACTAAGA +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLPIQQG*CFFELR
Trigger: TCTTAGTTCGAAGAAGCAGCAGCCCTGCTGAATTGG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGGCCCATGGACAGCTCTaGCTCATTGGTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQAHGQL*LIGTAQ
Trigger: CTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGC...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGTGGCTTGTACACTGTaGAAGCTCTTCACATATCCA +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLVACTL*KLFTYP
Trigger: TGGATATGTGAAGAGCTTGCACAGTGTACAAGCCAC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTGCTCTGGCCGAATGCTaGTCCTCTAGGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPAALAEC*SSRTAV
Trigger: CACAGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGC...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCTTGGTCATAGTTCATaGCACATGGGGTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLLGHSS*HMGLGK
Trigger: CTTCCCTAACCCCATGTGGCATGAACTATGACCAAG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTCCACTGGGGAGGGCTaGCCTTGGCTGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVSTGEG*PWLVTF
Trigger: GAAAGTCACCAGCCAAGGGCAGCCCTCCCCAGTGGA...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp TTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCACTTACTATCAGGTGGGCCGTCTGCCCGGTaGTGCCATTGCGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: FIYPQLSLAIATHHLLSGGPSAR*CHCAEG
Trigger: GCCTTCAGCGCAATGGCAGCACCGGGCAGACGGCCC...ACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAGTGGTTCTGAATTATTaGTTCGAGATACAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVVVLNY*FEIQSS
Trigger: CGAGCTCTGTATCTCGAAGCAATAATTCAGAACCAC...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGAGGCCAGGGCCCCTTaGTCAAATATTGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLEARAP*SNIEMR
Trigger: TCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTC...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGAGGCCAGGGCCCCTTaGTCAAATATTGAAATGAGA +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFEARAP*SNIEMR
Trigger: TCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTGGTGAGGAGAGCCTCTaGTTAGTTAGCGGGCGTCAG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPAGEESL*LVSGRQ
Trigger: CTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACC...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCACTTCCCAAGTGAAGTaGGGGGTGGAGCAAACCTCT +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVTSQVK*GVEQTS
Trigger: AGAGGTTTGCTCCACCCCGCACTTCACTTGGGAAGT...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGAGGTGGTTCTCAAGGTaGTCCTGTCAGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSRWFSR*SCQWAW
Trigger: CCAGGCCCACTGACAGGAGCACCTTGAGAACCACCT...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGAGGTGGTTCTCAAGGTaGTCCTGTCAGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQRWFSR*SCQWAW
Trigger: CCAGGCCCACTGACAGGAGCACCTTGAGAACCACCT...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTGATGAGTCAGCGCTGTaGCTCAGGTGGGGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVADESAL*LRWGPS
Trigger: ACTAGGGCCCCACCTGAGGCACAGCGCTGACTCATC...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAAACACAGGTTTGTCCTaGAGAATCCACTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVNTGLS*RIHFLY
Trigger: GTACAGAAAGTGGATTCTCCAGGACAAACCTGTGTT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAATGTGCGTCCCCAACTaGAAGATCGTTTATGACCAG +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRMCVPN*KIVYDQ
Trigger: CTGGTCATAAACGATCTTCCAGTTGGGGACGCACAT...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACCAAAACTGGAGGAGATaGAGAAGACTGGTTATCCAG +
Preference number: 4 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHQNWRR*RRLVIQ
Trigger: CTGGATAACCAGTCTTCTCCATCTCCTCCAGTTTTG...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTCCAGCAAGGGGGCTCTaGCCGAATGCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVPARGL*PNAAPL
Trigger: TAGAGGAGCAGCATTCGGCCAGAGCCCCCTTGCTGG...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTTGTGTCTCACGGCACTaGCGGGAGTCCAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTCVSRH*RESKFF
Trigger: GAAAAATTTGGACTCCCGCCAGTGCCGTGAGACACA...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTACTGACGGCATTCGAGTaGAAACATGGAAAATCACTT +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVLTAFE*KHGKSL
Trigger: AAGTGATTTTCCATGTTTCCACTCGAATGCCGTCAG...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGAGGGAGAAAAGACTTaGGCTGCGAAATCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPREGEKT*AAKSSN
Trigger: ATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTC...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAACAAAGCCTGCGCAGTaGCGATGGACTCTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALTKPAQ*RWTLVS
Trigger: GCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGT...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTTTCTTCAGGCCTGGGTaGCCAAGCAGCCTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPFFRPG*PSSLKV
Trigger: TACCTTCAGGCTGCTTGGCCACCCAGGCCTGAAGAA...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTTCTTCAGGCCTGGGTaGCCAAGCAGCCTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFFFRPG*PSSLKV
Trigger: TACCTTCAGGCTGCTTGGCCACCCAGGCCTGAAGAA...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTTGTCATCGGGGGTCATaGGGTCGTTATAATCCTCAG +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPCHRGS*GRYNPQ
Trigger: CTGAGGATTATAACGACCCCATGACCCCCGATGACA...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTACATCAGCTTTGCTCTaGATGGAATCTGGGAATAGG +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLTSALL*MESGNR
Trigger: CCTATTCCCAGATTCCATCCAGAGCAAAGCTGATGT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGGTGGCTGCCATCAGTaGAGATGTGTGCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPGGCHQ*RCVLSR
Trigger: CCGAGAAAGCACACATCTCCACTGATGGCAGCCACC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGGTGGCTGCCATCAGTaGAGATGTGTGCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPGGCHQ*RCVLSR
Trigger: CCGAGAAAGCACACATCTCCACTGATGGCAGCCACC...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGGTCCCCCACCAGCATTaGGAAGCCAGGAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGVPHQH*EARKTQ
Trigger: CTGGGTTTTCCTGGCTTCTCAATGCTGGTGGGGGAC...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTATGGCCTCTTTCACCTaGGGGTGGCTTGTACACTGT +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPAMASFT*GWLVHC
Trigger: ACAGTGTACAAGCCACCCTCAGGTGAAAGAGGCCAT...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAAATTCTGCTGATGAATaGTACTGGACTGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRNSADE*YWTGSE
Trigger: CTCTGAGCCAGTCCAGTATCATTCATCAGCAGAATT...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCATGTCATGGTTCTCGCTaGCAAGGCTGTGCAGTATGG +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPCHGSR*QGCAVW
Trigger: CCATACTGCACAGCCTTGTCAGCGAGAACCATGACA...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGGCTGCCCTTGGCTGGTaGCTTTCATTGCAGAATCGA +
Preference number: 4 (lower is better)
Translates to: GRPAEGTSTATKFPGDSGAALGW*LSLQNR
Trigger: TCGATTCTGCAATGAAAGTCACCAGCCAAGGGCAGC...CCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAGCTGAAGGCCACCCATaGACCCACAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIAEGHP*THSGWR
Trigger: TCTCCACCCACTGTGGGTTCATGGGTGGCCTTCAGC...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAGTGCTGCCATTGCGCTaGAGGCCACCCATGAACCCA +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIVLPLR*RPPMNP
Trigger: TGGGTTCATGGGTGGCCTTCAGCGCAATGGCAGCAC...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp GTTTTAATCCGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTTGGGCTCGTCATTCCCCAAGTaGCGAAGCTTTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLIRSAEGVAGRGRKDLGSSFPK*RSFLVR
Trigger: CCTCACCAAAAAGCTTCGTCACTTGGGGAATGACGA...GCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR TCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTCTGGTAGAGTGGGATaGGGCACTTCACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVSGRVG*GTSQPC
Trigger: GCAGGGCTGTGAAGTGCCTCATCCCACTCTACCAGA...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGTTTAATCCGTTCCGCTaGGGGAGTAGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQFNPFR*GSSWER
Trigger: CCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAA...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTCCTCTGCCCCCTCCCTaGAAGCGCAGAATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVPLPPP*KRRIFS
Trigger: GGAAAAGATTCTGCGCTTTCAGGGAGGGGGCAGAGG...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGTCTCAGCCTAGCGCCTaGAGCCGGCATGCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLSQPSA*SRHAPF
Trigger: AAAAGGCGCATGCCGGCTTCAGGCGCTAGGCTGAGA...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTAGCAAAGTTGCAGCGTaGGGCTTTTGGAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPSKVAA*GFWRHK
Trigger: CTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCT...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTTTTCTGAGGCCTGTGTaGGGCCTCTCTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLFLRPV*GLSGQQ
Trigger: CTGTTGCCCAGAGAGGCCTCACACAGGCCTCAGAAA...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGCCGTTCTGATGGGGTaGGAGCCTCAGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLAVLMG*EPQKAS
Trigger: AGAAGCCTTCTGAGGCTCTCACCCCATCAGAACGGC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTGTAAGGCTGAGGGTCTaGTCAATCAACCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPVRLRV*SINLCH
Trigger: GTGACATAGGTTGATTGATCAGACCCTCAGCCTTAC...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCCATCAGACCTCCACATaGCACCGATACAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPHQTST*HRYSRS
Trigger: GGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATG...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGCTAGAACACAGCCTTTaGCTCGTTGCTTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLLEHSL*LVASFP
Trigger: AGGAAAAGAAGCAACGAGGCAAAGGCTGTGTTCTAG...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCCTCCGAAGGACCTGCTaGTGCTGTCCCACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFLRRTC*CCPTVR
Trigger: TCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAG...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGTCTTCCTCACAGGTCTaGCATGGGCCCATGGACAGC +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGSSSQV*HGPMDS
Trigger: GCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGA...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCAACTTCTGGCACTGACTaGAGTAAAGGAATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPTSGTD*SKGISW
Trigger: CCAGGAGATTCCTTTACTGCAGTCAGTGCCAGAAGT...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGAACAGCAATGCATCTTaGATATTCATTTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VAAISGDVCFLGVAAWAANSNAS*IFIWFF
Trigger: GAAGAACCAAATGAATATGCAAGATGCATTGCTGTT...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGGCTTGTACACTGTaGAAGCTCTTCACATATCCA +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRVACTL*KLFTYP
Trigger: TGGATATGTGAAGAGCTTGCACAGTGTACAAGCCAC...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCTTTCCTGCTGTCATCTaGCCAGAGCAGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPFPAVI*PEQPHQ
Trigger: CTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAA...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCCGCAGAATCTTTTCCTaGTGTCATCTGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVRRIFS*CHLPRA
Trigger: TGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCG...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGAAGCAAGCTGCCCTCTaGCCCCTCCCTGAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTKQAAL*PLPESA
Trigger: TGCGCTTTCAGGGAGGGGGCAGAGGGCAGCTTGCTT...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCGACCTGAAGCGCCTCTaGGTGGTGAGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTDLKRL*VVRRAS
Trigger: AGAGGCTCTCCTCACCACGCAGAGGCGCTTCAGGTC...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGCCTGAAGCCGGCATaGGCCTTTTGTGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVARLKPA*AFCVDV
Trigger: CACATCCACACAAAAGGCGCATGCCGGCTTCAGGCG...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAACGCCTGAAGCCGGCATaGGCCTTTTGTGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLERLKPA*AFCVDV
Trigger: CACATCCACACAAAAGGCGCATGCCGGCTTCAGGCG...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCATCAGTGGAGATGTGTaGTTTCTCGGTGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPISGDV*FLGVAA
Trigger: GGCAGCCACACCGAGAAAGCACACATCTCCACTGAT...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGGAGAGTCGGGTGGCTaGCATCAGTGGAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLGESGG*HQWRCV
Trigger: CACACATCTCCACTGATGGCAGCCACCCGACTCTCC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTTGTCCCACTGTGAGATaGCCAGATCCGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLCPTVR*PDPAAG
Trigger: ACCTGCAGCCGGATCTGGCCATCTCACAGTGGGACA...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCCACAGCAGCAGAGTCTaGGTGCCAACCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFHSSRV*VPTSEA
Trigger: AGCCTCACTGGTTGGCACCCAGACTCTGCTGCTGTG...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCTCTGGCATGGATCTTaGGTGACTGGATGTTATTCA +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLLWHGS*VTGCYS
Trigger: TGAATAACATCCAGTCACCCAAGATCCATGCCAGAG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTAAACATTCTGAGTGGTaGGATCAAAACTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLKHSEW*DQNWRR
Trigger: TCTCCTCCAGTTTTGATCCCACCACTCAGAATGTTT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGAACGTCCTGGCGTCTaGTCATCATGGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPERPGV*SSWHRS
Trigger: TGATCTGTGCCATGATGACCAGACGCCAGGACGTTC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCTTTGGCAGAACGTCCTaGCGTCTGGTCATCATGGCA +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPFGRTS*RLVIMA
Trigger: TGCCATGATGACCAGACGCCAGGACGTTCTGCCAAA...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGCTACCGGTCCTTCTGTaGGTGTCTGAAGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRPAEGTSTATKFPGDSGLPVLL*VSEGRR
Trigger: TCTCCTACCTTCAGACACCCACAGAAGGACCGGTAG...CCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTATCTCCAAAGGCAGTTaGGATAATACCCCTGCGGTA +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTISKGS*DNTPAV
Trigger: TACCGCAGGGGTATTATCCCAACTGCCTTTGGAGAT...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGAAGCTCTGGTAGAGTaGGATGAGGCACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPEALVE*DEALHS
Trigger: GCTGTGAAGTGCCTCATCCCACTCTACCAGAGCTTC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGACAAAGCCTGCGCAGTaGCGATGGACTCTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQTKPAQ*RWTLVS
Trigger: GCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGT...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCATCCGACAGGAACGACTaGCTCAGCTCTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPSDRND*LSSFSF
Trigger: AAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGA...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCGTTCCTCCCATTCCGTaGGGGAGGACAGCACACCAA +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTVPPIP*GRTAHQ
Trigger: TTGGTGTGCTGTCCTCCCTCACGGAATGGGAGGAAC...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTACTTGTCTGTTTCCACTaGGGAGTACTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALLVCFH*GVLCTW
Trigger: CCAAGTGCAGAGTACTCCTCAGTGGAAACAGACAAG...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTTGTCATGGTTCTCGCTaGCAAGGCTGTGCAGTATGG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPACHGSR*QGCAVW
Trigger: CCATACTGCACAGCCTTGTCAGCGAGAACCATGACA...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGCAGAATCGAAGTTATaGCTCTGGATATACTCATCC +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRAESKL*LWIYSS
Trigger: GGATGAGTATATCCAGAGTCATAACTTCGATTCTGC...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGCAGAATCGAAGTTATaGCTCTGGATATACTCATCC +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLAESKL*LWIYSS
Trigger: GGATGAGTATATCCAGAGTCATAACTTCGATTCTGC...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCAATCACTTCCACAGTTaGGGTAGCATAGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVNHFHS*GSIVRG
Trigger: GCCCCTTACTATGCTACCTCAACTGTGGAAGTGATT...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGTCATTCCCCAAGTaGCGAAGCTTTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFSSFPK*RSFLVR
Trigger: CCTCACCAAAAAGCTTCGTCACTTGGGGAATGACGA...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCAGCCCTGCTGGCGTTaGTGCACGTGGCACATACAA +
Preference number: 4 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFQPCWR*CTWHIQ
Trigger: TTGTATGTGCCACGTGCATCAACGCCAGCAGGGCTG...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTTTAATCCGTTCCGCTaGGGGAGTAGCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVFNPFR*GSSWER
Trigger: CCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAA...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGAGTTTGAGTCCCATCTaGGACACGGTAGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVSLSPI*DTVVGF
Trigger: GAATCCCACTACCGTGTCTCAGATGGGACTCAAACT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTAGTTTGAGTCCCATCTaGGACACGGTAGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPASLSPI*DTVVGF
Trigger: GAATCCCACTACCGTGTCTCAGATGGGACTCAAACT...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCCTCTGCCCCCTCCCTaGAAGCGCAGAATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFPLPPP*KRRIFS
Trigger: GGAAAAGATTCTGCGCTTTCAGGGAGGGGGCAGAGG...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCTGGTCTGTGTTGTTTTaGGCCTTGGGACACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPWSVLF*ALGHFL
Trigger: CAGGAAGTGTCCCAAGGCTCAAAACAACACAGACCA...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGACAAGAAACATTTCTaGGGCCTGTGTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPDKKHF*GLCEAS
Trigger: AGAGGCCTCACACAGGCCTCAGAAATGTTTCTTGTC...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGACAAGAAACATTTCTaGGGCCTGTGTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPDKKHF*GLCEAS
Trigger: AGAGGCCTCACACAGGCCTCAGAAATGTTTCTTGTC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAACTCTTCGCTGCTGACTaGTTTCTCTGCTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLELFAAD*FLCCRT
Trigger: CGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAG...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCGATTTACTTCCCAAGTaGAGTGCGGGGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPDLLPK*SAGWSK
Trigger: TTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATC...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTACCCATCATAAGCCCTaGGTTAGGGGCTGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVTHHKP*VRGCVS
Trigger: AGAGACGCAGCCCCTAACTCAGGGCTTATGATGGGT...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGGCCGTTCTGATGGGGTaGGAGCCTCAGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKAVLMG*EPQKAS
Trigger: AGAAGCCTTCTGAGGCTCTCACCCCATCAGAACGGC...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCAGTGAGTCTGGCTCCTaGGTCTCCCCGTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFSESGS*VSPFSL
Trigger: TAGGGAAAACGGGGAGACTCAGGAGCCAGACTCACT...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGCATTTGTCCCAAGAGTaGGTCTGGCTCCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQHLSQE*VWLLSL
Trigger: GAGACTCAGGAGCCAGACTCACTCTTGGGACAAATG...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCCAACTCCAGTCCACGTaGTCACGAGAAACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFQLQST*SRETWL
Trigger: CAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTG...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGCAAAAATCAGAACCTaGTCTTCTGCACAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLAKIRT*SSAQFV
Trigger: GACAAACTGTGCAGAAGAGCAGGTTCTGATTTTTGC...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTGAATGGCTTTTGTCCTaGTCCGTGGGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFEWLLS*SVGPPP
Trigger: TGGTGGTGGGCCCACGGAGCAGGACAAAAGCCATTC...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGCTTTTCCACTCCCGGTaGTCCAGACGTGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKLFHSR*SRRGGT
Trigger: AGTGCCACCACGTCTGGAGCACCGGGAGTGGAAAAG...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCGGGGATGTCGGAGGTaGTGCTGCTCCGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQRGCRR*CCSEGP
Trigger: AGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGGCCCATGGACAGCTCTaGCTCATTGGTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTAHGQL*LIGTAQ
Trigger: CTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGC...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTTCACGGGCAATGCCATaGACCAGTCCAAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLSRAMP*TSPRGR
Trigger: TCTGCCTCTTGGACTGGTGCATGGCATTGCCCGTGA...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGCATCAAGCAATAACCTaGAGAAATAAAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRHQAIT*RNKRVL
Trigger: GAGGACCCTTTTATTTCTGCAGGTTATTGCTTGATG...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGTTTCCTGCTGTCATCTaGCCAGAGCAGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGFPAVI*PEQPHQ
Trigger: CTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAA...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCGCAGAATCTTTTCCTaGTGTCATCTGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVRRIFS*CHLPRA
Trigger: TGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCG...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGAGAAACAACTTGGGGTaGAGAAGCAAGCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRPAEGTSTATKFPGDSGRNNLG*RSKLPS
Trigger: AGAGGGCAGCTTGCTTCTGCACCCCAAGTTGTTTCT...CCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGGACACTTCCTGTCCTaGAGGAACTTATGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALGHFLS*RNLCKD
Trigger: GTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGTCC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCACTTCCCAAGTGAAGTaGGGGGTGGAGCAAACCTCT +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCTSQVK*GVEQTS
Trigger: AGAGGTTTGCTCCACCCCGCACTTCACTTGGGAAGT...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCAGTCACTCTTCACATTaGCCTTCAGCCCCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPSHSSH*PSAPVS
Trigger: ACTCACGGGGGCTGAAGGGCAATGTGAAGAGTGACT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCATGGTGGCCAAGCTATaGTGCCCAGATGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFMVAKL*CPDVWN
Trigger: ATTCCAGACATCTGGGCAGCATAGCTTGGCCACCAT...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAGGCTGTCAGATTCCCTaGTCCACGTTCCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLEGCQIP*STFHLQ
Trigger: CTGGAGATGGAACGTGGAGCAGGGAATCTGACAGCC...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCATCAGTGGAGATGTGTaGTTTCTCGGTGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPISGDV*FLGVAA
Trigger: GGCAGCCACACCGAGAAAGCACACATCTCCACTGAT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCCAGCCACAACATCTGTaGGAGTATTCAGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVQPQHL*EYSVLG
Trigger: ACCCAGAACTGAATACTCCCACAGATGTTGTGGCTG...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGCACAGCAGCAGAGTCTaGGTGCCAACCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKHSSRV*VPTSEA
Trigger: AGCCTCACTGGTTGGCACCCAGACTCTGCTGCTGTG...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTGGAGATGGAGAAGACTaGTTATCCAGGCTTATTGCT +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTGDGED*LSRLIA
Trigger: AGCAATAAGCCTGGATAACCAGTCTTCTCCATCTCC...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGGAACGTCCTGGCGTCTaGTCATCATGGCACAGATCA +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQERPGV*SSWHRS
Trigger: TGATCTGTGCCATGATGACCAGACGCCAGGACGTTC...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTAGGGGTCATAATCCGTaGATGACAAGTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPARGHNP*MTSQPG
Trigger: CCCTGGCTGACTTGTCATCCACGGATTATGACCCCT...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGACATGGGCATTGTCATaGTTCTCGCTGACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVTWALS*FSLTRL
Trigger: CAGCCTTGTCAGCGAGAACCATGACAATGCCCATGT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAACATGGGCATTGTCATaGTTCTCGCTGACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALTWALS*FSLTRL
Trigger: CAGCCTTGTCAGCGAGAACCATGACAATGCCCATGT...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTTGTGTCTCACGGCACTaGCGGGAGTCCAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPACVSRH*RESKFF
Trigger: GAAAAATTTGGACTCCCGCCAGTGCCGTGAGACACA...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGCTGACGGCATTCGAGTaGAAACATGGAAAATCACTT +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLLTAFE*KHGKSL
Trigger: AAGTGATTTTCCATGTTTCCACTCGAATGCCGTCAG...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTGGCACATACAAGGCTTaGCAGCAGCTTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVAGTYKA*QQLPTH
Trigger: GTGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCC...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGGAAGCTCTGGTAGAGTaGGATGAGGCACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSEALVE*DEALHS
Trigger: GCTGTGAAGTGCCTCATCCCACTCTACCAGAGCTTC...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGGCGTCAGGTACCATGTaGGAAAACACTGGACAACTG +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVASGTM*ENTGQL
Trigger: CAGTTGTCCAGTGTTTTCCCACATGGTACCTGACGC...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTAGGACCCTGTATTTCTaGAATCTTCTGAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLRTLYF*NLLSVL
Trigger: TAGAACACTCAGAAGATTCCAGAAATACAGGGTCCT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTCCTGTCAGTGGGCCTaGCCTGCAATCCCCTATAAA +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCSCQWA*PAIPYK
Trigger: TTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGA...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCACTTACTATCAGGTGGAATAATCCTGCCCTaGCCCCCAGGGGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: FIYPQLSLAIATHHLLSGGIILP*PPGEGP
Trigger: TGGTCCCTCCCCTGGGGGCCAGGGCAGGATTATTCC...ACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCGACATAACCTCGTGTTaGCAAGAGAATCCGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPDITSC*QENPLY
Trigger: GTACAGCGGATTCTCTTGTCAACACGAGGTTATGTC...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTACCAGAACTTTCAGATaGGGCCTCCTTGCTATCAGT +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPTRTFR*GLLAIS
Trigger: ACTGATAGCAAGGAGGCCTCATCTGAAAGTTCTGGT...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGTGCTCATTGCACTTGTaGAGGAGTATGTGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGCSLHL*RSMCVP
Trigger: GGGGACGCACATACTCCTTCACAAGTGCAATGAGCA...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGACGGTGGTTCCTTTCTaGGGATCTAGAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQTVVPF*GSRTQP
Trigger: AGGCTGTGTTCTAGATCCTCAGAAAGGAACCACCGT...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCGCCTTAAACAGCCATaGTGCAAACATTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVRLKQP*CKHSEW
Trigger: CCACTCAGAATGTTTGCATCATGGCTGTTTAAGGCG...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTACGCCTTAAACAGCCATaGTGCAAACATTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALRLKQP*CKHSEW
Trigger: CCACTCAGAATGTTTGCATCATGGCTGTTTAAGGCG...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTGTCATAATCCGTGGATaGCAAGTCAGCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVVIIRG*QVSQGQ
Trigger: CTGACCCTGGCTGACTTGTCATCCACGGATTATGAC...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCAGCAGAATCGAAGTTATaGCTCTGGATATACTCATCC +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPAESKL*LWIYSS
Trigger: GGATGAGTATATCCAGAGTCATAACTTCGATTCTGC...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAGCTGCCCTTGGCTGGTaGCTTTCATTGCAGAATCGA +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLEAALGW*LSLQNR
Trigger: TCGATTCTGCAATGAAAGTCACCAGCCAAGGGCAGC...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTGTGCTGCCATTGCGCTaGAGGCCACCCATGAACCCA +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGVLPLR*RPPMNP
Trigger: TGGGTTCATGGGTGGCCTTCAGCGCAATGGCAGCAC...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR TCA 90 bp GGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGAATCACTTCCACAGTTaGGGTAGCATAGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRPAEGTSTATKFPGDSGNHFHS*GSIVRG
Trigger: GCCCCTTACTATGCTACCTCAACTGTGGAAGTGATT...CCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCGACGAAGCTTTTTGGTaGGGGAATCATCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPDEAFW*GNHLSL
Trigger: CAGACTCAGATGATTCCCTCACCAAAAAGCTTCGTC...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTCTTCGTTATCGCGATaGAGAACATGTGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFSSLSR*RTCDSS
Trigger: TGAAGAATCACATGTTCTTCATCGCGATAACGAAGA...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR TCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTACCCTTGCTCAAATATTaGAATGAGACCTTTACGTGT +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLPLLKY*NETFTC
Trigger: ACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGG...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTAGCGCCTCTGCGTGGTaGGGAGAGCCTCTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGSASAW*GEPLLS
Trigger: ACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCT...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTGATTTACTTCCCAAGTaGAGTGCGGGGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPADLLPK*SAGWSK
Trigger: TTTGCTCCACCCCGCACTTCACTTGGGAAGTAAATC...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTTCATACACCATTCGGTaGTCTTCTTCAATGCTACAG +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTSYTIR*SSSMLQ
Trigger: CTGTAGCATTGAAGAAGAGCACCGAATGGTGTATGA...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCACACCCTCTGCTCATTaGACTTGTGAAGGAGTATGT +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVTPSAH*TCEGVC
Trigger: ACATACTCCTTCACAAGTGCAATGAGCAGAGGGTGT...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTTTCGTCAAAAATACCTaGAACAAAGCCTGGACGCCG +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPFVKNT*NKAWTP
Trigger: CGGCGTCCAGGCTTTGTTGCAGGTATTTTTGACGAA...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGGGATGTCGGAGGTGCTaGTGCTCCGAAGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQGCRRC*CSEGPA
Trigger: AGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCC...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCACCAAATGTGTCACGATaGCAGCTCGAAATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPPNVSR*QLEIRN
Trigger: ATTTCTGATTTCGAGCTGGCATCGTGACACATTTGG...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGCTGGTGACTTTCATTaGAGAATCGAAGTTATGACT +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFAGDFH*RIEVMT
Trigger: AGTCATAACTTCGATTCTGCAATGAAAGTCACCAGC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR GCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGTCCACTGGGGAGGGCTaGCCTTGGCTGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQSTGEG*PWLVTF
Trigger: GAAAGTCACCAGCCAAGGGCAGCCCTCCCCAGTGGA...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTACATCAAGCAATAACCTaGAGAAATAAAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLHQAIT*RNKRVL
Trigger: GAGGACCCTTTTATTTCTGCAGGTTATTGCTTGATG...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTCATCAAGCAATAACCTaGAGAAATAAAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFHQAIT*RNKRVL
Trigger: GAGGACCCTTTTATTTCTGCAGGTTATTGCTTGATG...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR GCA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAAAGAAACTTGATCATTaGAATTTTCCACCCCAGATA +
Preference number: 4 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVKKLDH*NFPPQI
Trigger: TATCTGGGGTGGAAAATTGCAATGATCAAGTTTCTT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCAATGTACACAGGCTTTaGTCTCAAATGGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVNVHRL*SQMGDV
Trigger: GACATCCCCCATTTGAGACCAAAGCCTGTGTACATT...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTGGGAGTATTCAGTTCTaGGTCTTCCTCACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPAGSIQF*VFLTGL
Trigger: CAGACCTGTGAGGAAGACCCAGAACTGAATACTCCC...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTACAGCCACAACATCTGTaGGAGTATTCAGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALQPQHL*EYSVLG
Trigger: ACCCAGAACTGAATACTCCCACAGATGTTGTGGCTG...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTTATCCTGATCCTCGCTaGTTAATCCCAGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPYPDPR*LIPGAS
Trigger: TGATGCACCTGGGATTAACCAGCGAGGATCAGGATA...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGACATCGCAAGCTACCTaGGCCACGATTTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQTSQAT*ATILLG
Trigger: TCCCAACAAAATCGTGGCCCAGGTAGCTTGCGATGT...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGTGTGTCTCACGGCACTaGCGGGAGTCCAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQCVSRH*RESKFF
Trigger: GAAAAATTTGGACTCCCGCCAGTGCCGTGAGACACA...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTCAGACCAGACGATATaGACCTCGTCATTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCSDQTI*TSSFPK
Trigger: CTTGGGGAATGACGAGGTCCATATCGTCTGGTCTGA...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTATCTCCAAAGGCAGTTaGGATAATACCCCTGCGGTA +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPAISKGS*DNTPAV
Trigger: TACCGCAGGGGTATTATCCCAACTGCCTTTGGAGAT...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CCA 90 bp GGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGGAGGGAGAAAAGACTTaGGCTGCGAAATCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: GRPAEGTSTATKFPGDSGEGEKT*AAKSSN
Trigger: ATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTC...CCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGCAGTGGGTTCATCTCTaGTTTTTGGTGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLQWVHL*FLVTFS
Trigger: AGAAAAAGTCACCAAAAACCAGAGATGAACCCACTG...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTACAGTGGGTTCATCTCTaGTTTTTGGTGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TGLALPEASESYHILAQLQWVHL*FLVTFS
Trigger: AGAAAAAGTCACCAAAAACCAGAGATGAACCCACTG...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCCTAATAAGCCTTCCTTaGAGCCAAATGGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: PCSTFHLQTKAATENGRLLISLP*SQMGKN
Trigger: ATTTTTGCCCATTTGGCTCCAAGGAAGGCTTATTAG...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCCACTTCCCCAACATGTaGCTCTTAGGAACCGCAGAC +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFHFPNM*LLGTAD
Trigger: GTCTGCGGTTCCTAAGAGCCACATGTTGGGGAAGTG...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGATGTGCATGGCTCTGTaGATCTGCATGAGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQMCMAL*ICMSSC
Trigger: GCAAGAGCTCATGCAGATCCACAGAGCCATGCACAT...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGTGCTCATTGCACTTGTaGAGGAGTATGTGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLCSLHL*RSMCVP
Trigger: GGGGACGCACATACTCCTTCACAAGTGCAATGAGCA...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTCAGCTTCTGTTATCCTaGGTAGTATTTGCAACATCT +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPQLLLS*VVFATS
Trigger: AGATGTTGCAAATACTACTCAGGATAACAGAAGCTG...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGTTCCTCCCATTCCGTaGGGGAGGACAGCACACCAA +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHVPPIP*GRTAHQ
Trigger: TTGGTGTGCTGTCCTCCCTCACGGAATGGGAGGAAC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAAATAGGCTGAGGCTCTaGAGAACTCGAATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPNRLRL*RTRILC
Trigger: ACACAGAATTCGAGTTCTTCAGAGCCTCAGCCTATT...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTATGCACCAGGAAATCTaGGTTTGGCAGAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLMHQEI*VWQNVL
Trigger: CAGGACGTTCTGCCAAACTCAGATTTCCTGGTGCAT...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCCCAAGAGTACTTCCCTaGGATATCCCTCACAATTAC +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFPRVLP*DIPHNY
Trigger: GTAATTGTGAGGGATATCTCAGGGAAGTACTCTTGG...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCCAAGAGTACTTCCCTaGGATATCCCTCACAATTAC +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVPRVLP*DIPHNY
Trigger: GTAATTGTGAGGGATATCTCAGGGAAGTACTCTTGG...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTATATACTCATCCTCTTaGGCATTTTGGCGCAAAATG +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTIYSSS*AFWRKM
Trigger: CATTTTGCGCCAAAATGCTCAAGAGGATGAGTATAT...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGGCTGCCCTTGGCTGGTaGCTTTCATTGCAGAATCGA +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKAALGW*LSLQNR
Trigger: TCGATTCTGCAATGAAAGTCACCAGCCAAGGGCAGC...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGTGGGTAAATAATGATTaGAACATCTCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLWVNND*NISKGS
Trigger: ACTGCCTTTGGAGATGTTTCAATCATTATTTACCCA...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR TCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACACAGCCCTGCTGGCGTTaGTGCACGTGGCACATACAA +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTQPCWR*CTWHIQ
Trigger: TTGTATGTGCCACGTGCATCAACGCCAGCAGGGCTG...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCTTGCCAGCCCCTTTGTaGATCATGCTTGGGTTCATA +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPLPAPL*IMLGFI
Trigger: TATGAACCCAAGCATGATTCACAAAGGGGCTGGCAA...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTAAAACACTGGACAACTaGGGTAAAACTTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPKTLDN*GKTSPG
Trigger: CCCAGGAGAAGTTTTACCTCAGTTGTCCAGTGTTTT...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGAGGATCAAGCCTGAGTaGTGGTGGCCAAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTRIKPE*WWPSYA
Trigger: AGCATAGCTTGGCCACCATCACTCAGGCTTGATCCT...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCGTAAGGCTGAGGGTCTaGTCAATCAACCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCVRLRV*SINLCH
Trigger: GTGACATAGGTTGATTGATCAGACCCTCAGCCTTAC...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATATTGGTCCAACATACTTaGCTGATGCGTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYILVQHT*LMRAQL
Trigger: GAGCTGGGCACGCATCAGTCAAGTATGTTGGACCAA...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTACTTCGCGGTGGTTCTaGATATTGCTTCGAGATACA +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPATSRWF*ILLRDT
Trigger: TGTATCTCGAAGCAATATTCAGAACCACCGCGAAGT...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTATCCATAAACGGTTCTTaGAAGCACTGCTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALSINGS*KHCCQG
Trigger: TCCTTGACAGCAGTGCTTGCAAGAACCGTTTATGGA...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCGAAGGACCTGCTGCTaGTGTCCCACTGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQRRTCC*CPTVRW
Trigger: CCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTATTCTGTGTGTTTTCTaGCTTTTGACCCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPILCVF*LLTLRR
Trigger: TCTTCTCAGGGTCAAAAGGCAGAAAACACACAGAAT...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCACTTCTGGCACTGACTaGAGTAAAGGAATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCTSGTD*SKGISW
Trigger: CCAGGAGATTCCTTTACTGCAGTCAGTGCCAGAAGT...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATTCGCTGACAAGGCTGTaGAGTATGGCAGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHSLTRL*SMAGPP
Trigger: TGGGGGCCCTGCCATACTGCACAGCCTTGTCAGCGA...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATGAGCAGCCACACCAGTaGCCACGTGTCAGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHEQPHQ*PRVSGF
Trigger: GAACCCACTGACACGTGGGCACTGGTGTGGCTGCTC...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTATTAGACAATTGTTTTaGCAGCCCCTTTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFIRQLF*QPLCES
Trigger: TGATTCACAAAGGGGCTGGCAAAACAATTGTCTAAT...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR GCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATGCTGTCCCTTCCCACTaGAGGGCGTTGCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHAVPSH*RALLCT
Trigger: GGTACAGAGCAACGCCCTGCAGTGGGAAGGGACAGC...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGATGGTGGCCAAGCTATaGTGCCCAGATGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGMVAKL*CPDVWN
Trigger: ATTCCAGACATCTGGGCAGCATAGCTTGGCCACCAT...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCCTCGGATGCAGACGCTaGCCTTCAGTAGATATAAAG +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCLGCRR*PSVDIK
Trigger: CTTTATATCTACTGAAGGGCAGCGTCTGCATCCGAG...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGCTCGGATGCAGACGCTaGCCTTCAGTAGATATAAAG +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQLGCRR*PSVDIK
Trigger: CTTTATATCTACTGAAGGGCAGCGTCTGCATCCGAG...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCTTCTTCACATCCCCGTaGCTCCTTCGGGAGAACATC +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTFFTSP*LLRENI
Trigger: GATGTTCTCCCGAAGGAGCCACGGGGATGTGAAGAA...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGAATGTACACAGGCTTTaGTCTCAAATGGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVNVHRL*SQMGDV
Trigger: GACATCCCCCATTTGAGACCAAAGCCTGTGTACATT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTACGAGCTGCCATATATaGAATCTTTGTACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: PGRCENKACAVAMDSGKLTSCHI*NLCTVN
Trigger: ATTTACAGTACAAAGATTCCATATATGGCAGCTCGT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCGTGCTGCTGTTAGAATaGCTTTTGTCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFVLLLE*LLSCSV
Trigger: CACGGAGCAGGACAAAAGCCATTCTAACAGCAGCAC...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAACCTGCAACAAAGCCTaGACGCCGGCTTTCACATTT +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLETCNKA*TPAFTF
Trigger: AAATGTGAAAGCCGGCGTCCAGGCTTTGTTGCAGGT...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATCTCACAGGTCTGCCATaGGCCCATGGACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHLTGLP*AHGQLC
Trigger: GCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAG...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCTGGCATGGATCTTaGGTGACTGGATGTTATTCA +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVLWHGS*VTGCYS
Trigger: TGAATAACATCCAGTCACCCAAGATCCATGCCAGAG...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGGATAGCAGAAAACTCTaGCATGGATCTTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVDSRKL*HGSWVT
Trigger: AGTCACCCAAGATCCATGCCAGAGTTTTCTGCTATC...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGAGGGGTCATAATCCGTaGATGACAAGTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTRGHNP*MTSQPG
Trigger: CCCTGGCTGACTTGTCATCCACGGATTATGACCCCT...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAAAGGATTTCTTCCATTaGGTGCTAAGCAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPKDFFH*VLSSLP
Trigger: TGGAAGGCTGCTTAGCACCCAATGGAAGAAATCCTT...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTGGGGAGGGCTGCCCTTaGCTGGTGACTTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGGEGCP*LVTFIA
Trigger: TGCAATGAAAGTCACCAGCCAAGGGCAGCCCTCCCC...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTCCCATGAACCCACAGTaGGTGGAGAGATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTPMNPQ*VERSTS
Trigger: GGAGGTGGATCTCTCCACCCACTGTGGGTTCATGGG...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCCCATGAACCCACAGTaGGTGGAGAGATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQPMNPQ*VERSTS
Trigger: GGAGGTGGATCTCTCCACCCACTGTGGGTTCATGGG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGATTCGAGTGGAAACATaGAAAATCACTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLIRVET*KITSTV
Trigger: AACTGTGGAAGTGATTTTCCATGTTTCCACTCGAAT...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAGCTTCCCACTCACTATaGCTCCATCAAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIASHSL*LHQTEA
Trigger: GGCCTCTGTTTGATGGAGCCATAGTGAGTGGGAAGC...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTCAGTGGGTTCATCTCTaGTTTTTGGTGACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTQWVHL*FLVTFS
Trigger: AGAAAAAGTCACCAAAAACCAGAGATGAACCCACTG...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGTGCCCACGTGTCAGTaGGTTCATCTCTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLVPTCQ*VHLWFL
Trigger: CAAAAACCAGAGATGAACCCACTGACACGTGGGCAC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGCGTCAGGTACCATGTaGGAAAACACTGGACAACTG +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLASGTM*ENTGQL
Trigger: CAGTTGTCCAGTGTTTTCCCACATGGTACCTGACGC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTAGGACCCTGTATTTCTaGAATCTTCTGAGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTRTLYF*NLLSVL
Trigger: TAGAACACTCAGAAGATTCCAGAAATACAGGGTCCT...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCTCCTGTCAGTGGGCCTaGCCTGCAATCCCCTATAAA +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTSCQWA*PAIPYK
Trigger: TTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGA...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTAGATGGCTGACCTACTaGTACCACCGTGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVARWLTY*YHRDES
Trigger: TGACTCATCACGGTGGTACCAGTAGGTCAGCCATCT...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGAGATGGCTGACCTACTaGTACCACCGTGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGRWLTY*YHRDES
Trigger: TGACTCATCACGGTGGTACCAGTAGGTCAGCCATCT...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGACATCAGCTTTGCTCTaGATGGAATCTGGGAATAGG +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVTSALL*MESGNR
Trigger: CCTATTCCCAGATTCCATCCAGAGCAAAGCTGATGT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTGTAAAAGAGGTTAACTaGAGAGTCGGGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVAVKEVN*RVGWLP
Trigger: TGGCAGCCACCCGACTCTCCAGTTAACCTCTTTTAC...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTTATCTGGCTCCTCCATaGACACAGGTTTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFYLAPP*TQVCPG
Trigger: TCCAGGACAAACCTGTGTTCATGGAGGAGCCAGATA...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCCAGCTTCTGTTATCCTaGGTAGTATTTGCAACATCT +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVQLLLS*VVFATS
Trigger: AGATGTTGCAAATACTACTCAGGATAACAGAAGCTG...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATACCCTGAGAAGAATCTaGGCACAGCGGCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHTLRRI*AQRLGD
Trigger: ATCCCCGAGCCGCTGTGCTCAGATTCTTCTCAGGGT...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGTACTACAGTCATCTGTaGGGCACTCGCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKYYSHL*GTRCYL
Trigger: CAGATAGCAGCGAGTGCCTCACAGATGACTGTAGTA...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCGGCATGGATCTTGGGTaGCTGGATGTTATTCACATC +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFGMDLG*LDVIHI
Trigger: GATGTGAATAACATCCAGTCACCCAAGATCCATGCC...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTATGATGCAAACATTCTaGGTGGTGGGATCAAAACTG +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPMMQTF*VVGSKL
Trigger: CAGTTTTGATCCCACCACTCAGAATGTTTGCATCAT...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTTACTCCTATCACATTaGTGGCCTCTTTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCLLLSH*WPLSPE
Trigger: CTCAGGTGAAAGAGGCCATCAATGTGATAGGAGTAA...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGCTTGTCTGTTTCCACTaGGGAGTACTCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKLVCFH*GVLCTW
Trigger: CCAAGTGCAGAGTACTCCTCAGTGGAAACAGACAAG...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTAATTCTGCTGATGAATaGTACTGGACTGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPANSADE*YWTGSE
Trigger: CTCTGAGCCAGTCCAGTATCATTCATCAGCAGAATT...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTAATCACTTCCACAGTTaGGGTAGCATAGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVANHFHS*GSIVRG
Trigger: GCCCCTTACTATGCTACCTCAACTGTGGAAGTGATT...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGTCGTCATTCCCCAAGTaGCGAAGCTTTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTSSFPK*RSFLVR
Trigger: CCTCACCAAAAAGCTTCGTCACTTGGGGAATGACGA...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTTGGGTAAATAATGATTaGAACATCTCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPWVNND*NISKGS
Trigger: ACTGCCTTTGGAGATGTTTCAATCATTATTTACCCA...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCACTTCGCGGTGGTTCTaGATTATTGCTTCGAGATAC +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPTSRWF*IIASRY
Trigger: GTATCTCGAAGCAATAATTCAGAACCACCGCGAAGT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTTTTAATCCGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTTGGGCCCCTTGCTCAAATATTaGAATGAGACCTTTACGTGT +
Preference number: 4 (lower is better)
Translates to: VLIRSAEGVAGRGRKDLGPLLKY*NETFTC
Trigger: ACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGG...GCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR TCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTTTGCCAGCCCCTTTGTaGATCATGCTTGGGTTCATA +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVALPAPL*IMLGFI
Trigger: TATGAACCCAAGCATGATTCACAAAGGGGCTGGCAA...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR TCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGAAATTCTCGCCAGGATaGGCAGGCCCGCCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTKFSPG*AGPPFR
Trigger: TCGGAAGGGCGGGCCTGCTCATCCTGGCGAGAATTT...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCAGCAGGATCAAGCCTaGGTGATGGTGGCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQQQDQA*VMVAKL
Trigger: TAGCTTGGCCACCATCACTCAGGCTTGATCCTGCTG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCGGGATCGCTGGTTCGTaGAAGCAAAATGAAATCATG +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPGIAGS*KQNEIM
Trigger: CATGATTTCATTTTGCTTTCACGAACCAGCGATCCC...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGGACCAAAGCTGCTACTaGGAATGGCAGGCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGDQSCY*EWQAQK
Trigger: TTTTTGAGCCTGCCATTCTCAGTAGCAGCTTTGGTC...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTCAACTCCAGTCCACGTaGTCACGAGAAACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGQLQST*SRETWL
Trigger: CAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTG...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGCCCTAGTGGATGAATaGTCCTCCGCAATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLALVDE*SSAILL
Trigger: CAGCAAAATTGCGGAGGATCATTCATCCACTAGGGC...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCCTCTGTGGATCTGCATaGGCTCTTGCTTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTLCGSA*ALACKA
Trigger: AGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAG...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGATGGTTGTTTCATGTTaGATTTCCCTCGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVMVVSC*ISLGCR
Trigger: TCTGCATCCGAGGGAAATTCAACATGAAACAACCAT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAAAAAACAACACGAGCTaGCATATATGGAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRKNNTS*HIWNLC
Trigger: ACAAAGATTCCATATATGGCAGCTCGTGTTGTTTTT...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGCATTTTCCTTGTGTCTaGTGCAAATCATCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLHFPCV*CKSSFK
Trigger: TTTGAAAGATGATTTGCAGCAGACACAAGGAAAATG...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCGGGAGCAAACAGCAATaGATCTTGCATATTCATTTG +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVGSKQQ*ILHIHL
Trigger: CAAATGAATATGCAAGATGCATTGCTGTTTGCTCCC...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGTCGCTGACAAGGCTGTaGAGTATGGCAGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTSLTRL*SMAGPP
Trigger: TGGGGGCCCTGCCATACTGCACAGCCTTGTCAGCGA...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCCTTGGTCATAGTTCATaGCACATGGGGTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFLGHSS*HMGLGK
Trigger: CTTCCCTAACCCCATGTGGCATGAACTATGACCAAG...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGTGGTTCTGAATTATTaGTTCGAGATACAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPVVLNY*FEIQSS
Trigger: CGAGCTCTGTATCTCGAAGCAATAATTCAGAACCAC...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAAGAAAAGACTTGGGCTaGGAAATCCTCGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALRKDLG*EILECH
Trigger: ATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCT...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCGATAAACATCAGCTTTaGTCTGGATGGAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPDKHQL*SGWNLG
Trigger: TCCCAGATTCCATCCAGAGCAAAGCTGATGTTTATC...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGATAAACATCAGCTTTaGTCTGGATGGAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALDKHQL*SGWNLG
Trigger: TCCCAGATTCCATCCAGAGCAAAGCTGATGTTTATC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGTGGAGTGATTTCTTCTaGATATATCTTTACATCAGC +
Preference number: 4 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLWSDFF*IYLYIS
Trigger: GCTGATGTAAAGATATATCCAGAAGAAATCACTCCA...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCACCACCACCAACAGTCTaGATGATTTTAGGCAATACA +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPPPPTV*MILGNT
Trigger: TGTATTGCCTAAAATCATCCAGACTGTTGGTGGTGG...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCCCACCACCAACAGTCTaGATGATTTTAGGCAATACA +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFPPPTV*MILGNT
Trigger: TGTATTGCCTAAAATCATCCAGACTGTTGGTGGTGG...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGGTGCTGCTGTTAGAATaGCTTTTGTCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKVLLLE*LLSCSV
Trigger: CACGGAGCAGGACAAAAGCCATTCTAACAGCAGCAC...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCAACACAGGTTTGTCCTaGAGAATCCACTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFNTGLS*RIHFLY
Trigger: GTACAGAAAGTGGATTCTCCAGGACAAACCTGTGTT...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGACCTGCAACAAAGCCTaGACGCCGGCTTTCACATTT +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLTCNKA*TPAFTF
Trigger: AAATGTGAAAGCCGGCGTCCAGGCTTTGTTGCAGGT...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCATATTTGTTTATCCTTTaGCTTCTGCATGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPYLFIL*LLHDSF
Trigger: GAAGCTGTCATGCAGAAGCCAAAGGATAAACAAATA...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGGGGAGTATTCAGTTCTaGGTCTTCCTCACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTGSIQF*VFLTGL
Trigger: CAGACCTGTGAGGAAGACCCAGAACTGAATACTCCC...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATCCTCTAGGACTGCTGTaGACACGGGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHPLGLL*TRGGEG
Trigger: TCCTTCTCCACCCCGTGTCCACAGCAGTCCTAGAGG...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGCTTCACATTTGCCAGTaGCAGGAAGGGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGLHICQ*QEGVII
Trigger: GATTATGACCCCTTCCTGCCACTGGCAAATGTGAAG...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCAAGGATTTCTTCCATTaGGTGCTAAGCAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCKDFFH*VLSSLP
Trigger: TGGAAGGCTGCTTAGCACCCAATGGAAGAAATCCTT...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCTCAGACCAGACGATATaGACCTCGTCATTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTSDQTI*TSSFPK
Trigger: CTTGGGGAATGACGAGGTCCATATCGTCTGGTCTGA...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCACTTACTATCAGGTCCCTGCGGTAGTCTCTaGAGTGTTCAGACCAGACGA +
Preference number: 4 (lower is better)
Translates to: FIYPQLSLAIATHHLLSGPCGSL*SVQTRR
Trigger: TCGTCTGGTCTGAACACTCCAGAGACTACCGCAGGG...ACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp GCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTTAATCCGTGCTTCCCACTCACTATaGCTCCATCAAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ARAPCSNIEMRPLRVLIRASHSL*LHQTEA
Trigger: GGCCTCTGTTTGATGGAGCCATAGTGAGTGGGAAGC...ACGGATTAAAACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACAGGCACATACAAGGCTTaGCAGCAGCTTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTGTYKA*QQLPTH
Trigger: GTGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCC...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAATTAAATCCCTCGCTTaGAATCGGCTACCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALIKSLA*NRLPKA
Trigger: AGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGATTAAATCCCTCGCTTaGAATCGGCTACCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVIKSLA*NRLPKA
Trigger: AGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTCCTGCGCAGTGGCGATaGACTCTGGTAAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGPAQWR*TLVSFL
Trigger: CAAGAAGCTTACCAGAGTCCATCGCCACTGCGCAGG...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATAGGCTTCTTCAGGCCTaGGTGGCCAAGCAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHRLLQA*VAKQPE
Trigger: TTCAGGCTGCTTGGCCACCCAGGCCTGAAGAAGCCT...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGACCTACAGGGGACTCTaGAGCCTAGGAGCATGCGAT +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQTYRGL*SLGACD
Trigger: ATCGCATGCTCCTAGGCTCCAGAGTCCCCTGTAGGT...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGTGTCATCGGGGGTCATaGGGTCGTTATAATCCTCAG +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKCHRGS*GRYNPQ
Trigger: CTGAGGATTATAACGACCCCATGACCCCCGATGACA...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCAACAAAAATGCCTGGTaGAATACTTCATTCACGAAG +
Preference number: 4 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVNKNAW*NTSFTK
Trigger: CTTCGTGAATGAAGTATTTCACCAGGCATTTTTGTT...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTACCAGAACTTTCAGATaGGGCCTCCTTGCTATCAGT +
Preference number: 4 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFTRTFR*GLLAIS
Trigger: ACTGATAGCAAGGAGGCCTCATCTGAAAGTTCTGGT...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGCATTTTCTGACTGTTaGCACTCCTCCACTTCAGTT +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLAFSDC*HSSTSV
Trigger: AACTGAAGTGGAGGAGTGTCAACAGTCAGAAAATGC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCATGATGCAAACATTCTaGGTGGTGGGATCAAAACTG +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCMMQTF*VVGSKL
Trigger: CAGTTTTGATCCCACCACTCAGAATGTTTGCATCAT...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTGCTCGAAATCAGAAATaGAGGATTTCTTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPAARNQK*RISSIG
Trigger: CCCAATGGAAGAAATCCTTCATTTCTGATTTCGAGC...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCGACGAAGCTTTTTGGTaGGGGAATCATCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTDEAFW*GNHLSL
Trigger: CAGACTCAGATGATTCCCTCACCAAAAAGCTTCGTC...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAGACGAAGCTTTTTGGTaGGGGAATCATCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIDEAFW*GNHLSL
Trigger: CAGACTCAGATGATTCCCTCACCAAAAAGCTTCGTC...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTTCTTCGTTATCGCGATaGAGAACATGTGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPASSLSR*RTCDSS
Trigger: TGAAGAATCACATGTTCTTCATCGCGATAACGAAGA...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCGGTTCTTGCAAGCACTaGTGTCAAGGAGTCCATAAT +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFGSCKH*CQGVHN
Trigger: ATTATGGACTCCTTGACAGCAGTGCTTGCAAGAACC...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTTCCATAAACGGTTCTTaGAAGCACTGCTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVASINGS*KHCCQG
Trigger: TCCTTGACAGCAGTGCTTGCAAGAACCGTTTATGGA...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR GCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGCCAATTCAGCAGGGCTaGTGCTTCTTCGAACTAAGA +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTPIQQG*CFFELR
Trigger: TCTTAGTTCGAAGAAGCAGCAGCCCTGCTGAATTGG...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTAGAGCTCTTCACATTTaGCAGTGGCAGGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGRALHI*QWQEGV
Trigger: GACCCCTTCCTGCCACTGGCAAATGTGAAGAGCTCT...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTGCTGGTGACTTTCATTaGAGAATCGAAGTTATGACT +
Preference number: 4 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPAAGDFH*RIEVMT
Trigger: AGTCATAACTTCGATTCTGCAATGAAAGTCACCAGC...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATGGCTGTCAGATTCCCTaGTCCACGTTCCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHGCQIP*STFHLQ
Trigger: CTGGAGATGGAACGTGGAGCAGGGAATCTGACAGCC...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGACTGGAGGCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTGGTGGTTCTGAATATTaGTTCGAGATACAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RLEARAPCSNIEMRPLRVGGSEY*FEIQSS
Trigger: CGAGCTCTGTATCTCGAAGCAATATTCAGAACCACC...AACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGCCTCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGATGTGCGTCCCCAACTaGAAGATCGTTTATGACCAG +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLMCVPN*KIVYDQ
Trigger: CTGGTCATAAACGATCTTCCAGTTGGGGACGCACAT...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGAATTTGAAGCATCGGTaGGACTCAGTTGTAACCAAT +
Preference number: 4 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVNLKHR*DSVVTN
Trigger: ATTGGTTACAACTGAGTCCCACCGATGCTTCAAATT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTTTCCTTATATTCATTTaGCAGTGTCGCCGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPFLIFI*QCRRLK
Trigger: TTTAAGGCGGCGACACTGCCAAATGAATATAAGGAA...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCATTCCTTATATTCATTTaGCAGTGTCGCCGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPFLIFI*QCRRLK
Trigger: TTTAAGGCGGCGACACTGCCAAATGAATATAAGGAA...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGTATCCTGATCCTCGCTaGTTAATCCCAGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKYPDPR*LIPGAS
Trigger: TGATGCACCTGGGATTAACCAGCGAGGATCAGGATA...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCGAGGGAGAAAAGACTTaGGCTGCGAAATCCTCGAAT +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTEGEKT*AAKSSN
Trigger: ATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTC...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGTCTCTTCTGTTCAGGTaGTTCTCAAGGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLSLLFR*FSRCSC
Trigger: ACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGA...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACCACTTCCCCAACATGTaGCTCTTAGGAACCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHHFPNM*LLGTAD
Trigger: GTCTGCGGTTCCTAAGAGCCACATGTTGGGGAAGTG...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTCAAGCTCTGGTAGAGTaGGATGAGGCACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTQALVE*DEALHS
Trigger: GCTGTGAAGTGCCTCATCCCACTCTACCAGAGCTTG...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACACACTCACCACCAGCCTaGACAAAGCACGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTHSPPA*TKHERV
Trigger: TACTCTCTCGTGCTTTGTCCAGGCTGGTGGTGAGTG...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
3UTR CAA 72 bp TGGTTTCTGGTAGGCACTCTGAATGAGCGATACGTTTaGCTCAGCATCCCACCTTATATACAATGGACTGCC +
Preference number: 4 (lower is better)
Translates to: WFLVGTLNERYV*LSIPPYIQWTA
Trigger: GGCAGTCCATTGTATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCCTGGAAGATCGTTTATaGCCAGAACTTTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFLEDRL*PELSDE
Trigger: CTCATCTGAAAGTTCTGGTCATAAACGATCTTCCAG...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACTACTACAGTCATCTGTaGGGCACTCGCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHYYSHL*GTRCYL
Trigger: CAGATAGCAGCGAGTGCCTCACAGATGACTGTAGTA...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGGCAGGTTTGGACTTCTaGACACCTCAAAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQAGLDF*TPQRTA
Trigger: AGCTGTCCTTTGAGGTGTTCAGAAGTCCAAACCTGC...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACTGGGGCCCTAGTGGATaGATGATCCTCCGCAATTTT +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHWGPSG*MILRNF
Trigger: AAAATTGCGGAGGATCATTCATCCACTAGGGCCCCA...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTGGTAGGCACTCTGAATaGGCGATACGTTTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTGRHSE*AIRFAQ
Trigger: CTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACC...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTGGTGCTCTTCTTCAATaGTACAGAGGCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGGALLQ*YRGWSC
Trigger: GCAACTCCAGCCTCTGTAGCATTGAAGAAGAGCACC...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGGTGCTCTTCTTCAATaGTACAGAGGCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHGALLQ*YRGWSC
Trigger: GCAACTCCAGCCTCTGTAGCATTGAAGAAGAGCACC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGAAGCGGGGTGGACAGTaGCTTATGATCGTATTTAAG +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKKRGGQ*LMIVFK
Trigger: CTTAAATACGATCATAAGGCACTGTCCACCCCGCTT...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGGGGAGCAAACAGCAATaGATCTTGCATATTCATTTG +
Preference number: 4 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQGSKQQ*ILHIHL
Trigger: CAAATGAATATGCAAGATGCATTGCTGTTTGCTCCC...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAAGAAAAGACTTGGGCTaGGAAATCCTCGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLERKDLG*EILECH
Trigger: ATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCT...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAATTAGACAATTGTTTTaGCAGCCCCTTTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPIRQLF*QPLCES
Trigger: TGATTCACAAAGGGGCTGGCAAAACAATTGTCTAAT...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGTGGCCAAGCTATGCTaGCCAGATGTCTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHVAKLC*PDVWNH
Trigger: ATGATTCCAGACATCTGGGCAGCATAGCTTGGCCAC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAAGGAACTTCAGCACATaGTTCCAACAAAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALRNFST*FQQKDV
Trigger: AACATCTTTTTGTTGGAACCATGTGCTGAAGTTCCT...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCACTTCAGTTGCTTTTTaGCGAACAATATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPTSVAF*RTIFLA
Trigger: GGCAAGAAATATTGTTCGCCAAAAAGCAACTGAAGT...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTTGGATCTTGGGTGACTaGATGTTATTCACATCTCCG +
Preference number: 4 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFWILGD*MLFTSP
Trigger: CGGAGATGTGAATAACATCCAGTCACCCAAGATCCA...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGAGATGGAGAAGACTaGTTATCCAGGCTTATTGCT +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLGDGED*LSRLIA
Trigger: AGCAATAAGCCTGGATAACCAGTCTTCTCCATCTCC...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGGGGCCACGATTTTGTTaGGAAACTTCAGAGTTACTC +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKGPRFC*ETSELL
Trigger: GAGTAACTCTGAAGTTTCCCAACAAAATCGTGGCCC...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGGCCACGATTTTGTTaGGAAACTTCAGAGTTACTC +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLGPRFC*ETSELL
Trigger: GAGTAACTCTGAAGTTTCCCAACAAAATCGTGGCCC...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACACATCGCAAGCTACCTaGGCCACGATTTTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHTSQAT*ATILLG
Trigger: TCCCAACAAAATCGTGGCCCAGGTAGCTTGCGATGT...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCAGACCAGACGATATaGACCTCGTCATTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTSDQTI*TSSFPK
Trigger: CTTGGGGAATGACGAGGTCCATATCGTCTGGTCTGA...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGGGCACATACAAGGCTTaGCAGCAGCTTCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTGTYKA*QQLPTH
Trigger: GTGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCC...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGCATGTGGGAAAACACTaGACAACTGAGGTAAAACTT +
Preference number: 4 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSHVGKH*TTEVKL
Trigger: AAGTTTTACCTCAGTTGTCCAGTGTTTTCCCACATG...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACAAGGGGAGGGACCAGATaGGACCTAATAGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTRGGTR*DLIALF
Trigger: GAAAAGAGCTATTAGGTCCCATCTGGTCCCTCCCCT...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCGTGGACAGTGCCTTATaGTCGTATTTAAGATATCCT +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFVDSAL*SYLRYP
Trigger: AGGATATCTTAAATACGATCATAAGGCACTGTCCAC...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAATATACTCATCCTCTTaGGCATTTTGGCGCAAAATG +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLEIYSSS*AFWRKM
Trigger: CATTTTGCGCCAAAATGCTCAAGAGGATGAGTATAT...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGTCTGGTAGAGTGGGATaGGGCACTTCACAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMSGRVG*GTSQPC
Trigger: GCAGGGCTGTGAAGTGCCTCATCCCACTCTACCAGA...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGTTGCCAGCCCCTTTGTaGATCATGCTTGGGTTCATA +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQLPAPL*IMLGFI
Trigger: TATGAACCCAAGCATGATTCACAAAGGGGCTGGCAA...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATTGGTCTGTGTTGTTTTaGGCCTTGGGACACTTCCTG +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHWSVLF*ALGHFL
Trigger: CAGGAAGTGTCCCAAGGCTCAAAACAACACAGACCA...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTGGGTTACAGGAGGGTTaGGTTATTTGCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGGLQEG*VICCLQ
Trigger: TTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCC...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGGGGTTACAGGAGGGTTaGGTTATTTGCTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQGLQEG*VICCLQ
Trigger: TTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCC...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCCAGCCTTTGCCTCGTTaGTTCTTTTCCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTQPLPR*FFSFCS
Trigger: TGAACAAAAGGAAAAGAAGCAACGAGGCAAAGGCTG...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAATTCTGTGTGTTTTCTaGCTTTTGACCCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TLPVLQELMQGQDPVFLEILCVF*LLTLRR
Trigger: TCTTCTCAGGGTCAAAAGGCAGAAAACACACAGAAT...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTTAAATACAAACAGCTaGAGGTTTGGACTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCLNTNS*RFGLLN
Trigger: GTTCAGAAGTCCAAACCTGCAGCTGTTTGTATTTAA...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCCCAAATGTGTCACGATaGCAGCTCGAAATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTPNVSR*QLEIRN
Trigger: ATTTCTGATTTCGAGCTGGCATCGTGACACATTTGG...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCAACAAAGTCTTCATATaGTTGGCTTCCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFNKVFI*LASSFI
Trigger: AATGAAAGAGGAAGCCAAGCATATGAAGACTTTGTT...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGTGTGAGAACAAAGCCTaGGCAGTGGCGATGGACTCT +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTCENKA*AVAMDS
Trigger: AGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACA...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCAATTTGAAGCATCGGTaGGACTCAGTTGTAACCAAT +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFNLKHR*DSVVTN
Trigger: ATTGGTTACAACTGAGTCCCACCGATGCTTCAAATT...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCTTCACATTTGCCAGTaGCAGGAAGGGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQLHICQ*QEGVII
Trigger: GATTATGACCCCTTCCTGCCACTGGCAAATGTGAAG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGTCGGAGCCTTCCACATaGGCATTGTCATGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTSEPST*ALSWFS
Trigger: CGAGAACCATGACAATGCCCATGTGGAAGGCTCCGA...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGGGTCACCCCATTCGAGTGGAAACATaGAAAATCACTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: CKAEGLINQPMSPSLGHPIRVET*KITSTV
Trigger: AACTGTGGAAGTGATTTTCCATGTTTCCACTCGAAT...GGGGTGACCCAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CATTTGCTTTGGTTTCTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCCTGACGGCATTCGAGTaGAAACATGGAAAATCACTT +
Preference number: 4 (lower is better)
Translates to: HLLWFLVGTLNERYVLLSLTAFE*KHGKSL
Trigger: AAGTGATTTTCCATGTTTCCACTCGAATGCCGTCAG...GCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAGAAACCAAAGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACAATCTCCAAAGGCAGTTaGGATAATACCCCTGCGGTA +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTISKGS*DNTPAV
Trigger: TACCGCAGGGGTATTATCCCAACTGCCTTTGGAGAT...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGGCTTCCCACTCACTATaGCTCCATCAAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTASHSL*LHQTEA
Trigger: GGCCTCTGTTTGATGGAGCCATAGTGAGTGGGAAGC...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGTCCGACAGGAACGACTaGCTCAGCTCTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQSDRND*LSSFSF
Trigger: AAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGA...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTGCATTTTCTGACTGTTaGCACTCCTCCACTTCAGTT +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGAFSDC*HSSTSV
Trigger: AACTGAAGTGGAGGAGTGTCAACAGTCAGAAAATGC...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGTCTTCGTTATCGCGATaGAGAACATGTGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKSSLSR*RTCDSS
Trigger: TGAAGAATCACATGTTCTTCATCGCGATAACGAAGA...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGAAAACACTGGACAACTaGGGTAAAACTTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQKTLDN*GKTSPG
Trigger: CCCAGGAGAAGTTTTACCTCAGTTGTCCAGTGTTTT...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTCTAGAACACAGCCTTTaGCTCGTTGCTTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGLEHSL*LVASFP
Trigger: AGGAAAAGAAGCAACGAGGCAAAGGCTGTGTTCTAG...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCCTCCTCCACTTCAGTTaGTTTTTGGCGAACAATATT +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTLLHFS*FLANNI
Trigger: AATATTGTTCGCCAAAAAGCAACTGAAGTGGAGGAG...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAAGCGGGGTGGACAGTaGCTTATGATCGTATTTAAG +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHKRGGQ*LMIVFK
Trigger: CTTAAATACGATCATAAGGCACTGTCCACCCCGCTT...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCTTAAATACAAACAGCTaGAGGTTTGGACTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SCPAGTYARTGPCISGIFLNTNS*RFGLLN
Trigger: GTTCAGAAGTCCAAACCTGCAGCTGTTTGTATTTAA...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATACATCAAGCAATAACCTaGAGAAATAAAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIHQAIT*RNKRVL
Trigger: GAGGACCCTTTTATTTCTGCAGGTTATTGCTTGATG...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTAACAAAGTCTTCATATaGTTGGCTTCCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: KTTPVHVITRNVAVRFPANKVFI*LASSFI
Trigger: AATGAAAGAGGAAGCCAAGCATATGAAGACTTTGTT...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTATTAGACAATTGTTTTaGCAGCCCCTTTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: WLLGTADFVAEATQAKFLIRQLF*QPLCES
Trigger: TGATTCACAAAGGGGCTGGCAAAACAATTGTCTAAT...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTCCCCCAACTCTCACTTaGTATAGCAACACATCACTT +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTPPTLT*YSNTSL
Trigger: AAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGG...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATATGTTGTGGAAATCACTaGAAAGAATGCCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYICCGNH*KECHLQ
Trigger: TTGGAGATGGCATTCTTTGCAGTGATTTCCACAACA...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp GCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTTAATCCGTCTGACGGCATTCGAGTaGAAACATGGAAAATCACTT +
Preference number: 4 (lower is better)
Translates to: ARAPCSNIEMRPLRVLIRLTAFE*KHGKSL
Trigger: AAGTGATTTTCCATGTTTCCACTCGAATGCCGTCAG...ACGGATTAAAACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CCA 90 bp CATTTGCTTTGGTTTCTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCCCACCTTATATACAATaGACTGCCACAAATAAGAGG +
Preference number: 4 (lower is better)
Translates to: HLLWFLVGTLNERYVLLSPPYIQ*TATNKR
Trigger: CCTCTTATTTGTGGCAGTCCATTGTATATAAGGTGG...GCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAGAAACCAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCTTCATTCACGAAGTTaGCATAACCTCGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQLHSRS*HNLVLT
Trigger: TGTCAACACGAGGTTATGTCAACTTCGTGAATGAAG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTCTTCATTCACGAAGTTaGCATAACCTCGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGLHSRS*HNLVLT
Trigger: TGTCAACACGAGGTTATGTCAACTTCGTGAATGAAG...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCTGGAAGATCGTTTATaGCCAGAACTTTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQLEDRL*PELSDE
Trigger: CTCATCTGAAAGTTCTGGTCATAAACGATCTTCCAG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTGCTCGAAATCAGAAATaGAGGATTTCTTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGARNQK*RISSIG
Trigger: CCCAATGGAAGAAATCCTTCATTTCTGATTTCGAGC...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCTGGGTAAATAATGATTaGAACATCTCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTWVNND*NISKGS
Trigger: ACTGCCTTTGGAGATGTTTCAATCATTATTTACCCA...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATGTCATATGGACAGACTaGGTGCAACTAAAACGATGG +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHVIWTD*VQLKRW
Trigger: CCATCGTTTTAGTTGCACTCAGTCTGTCCATATGAC...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATATTCAGCAGGGCTGCTaGTTCTTCGAACTAAGATTG +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHIQQGC*FFELRL
Trigger: CAATCTTAGTTCGAAGAAGCAGCAGCCCTGCTGAAT...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTAACAAAGTCTTCATATaGTTGGCTTCCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: LRALVQQRNFLEILGLVANKVFI*LASSFI
Trigger: AATGAAAGAGGAAGCCAAGCATATGAAGACTTTGTT...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR GCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTAGAAAAGACTTGGGCTaGGAAATCCTCGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGRKDLG*EILECH
Trigger: ATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCT...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR GCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTATGAGCGATACGTTTTaGTCAGCATCCCACCTTATA +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTMSDTF*SASHLI
Trigger: TATAAGGTGGGATGCTGAGCAAAACGTATCGCTCAT...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTAGGAACTTCAGCACATaGTTCCAACAAAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFRNFST*FQQKDV
Trigger: AACATCTTTTTGTTGGAACCATGTGCTGAAGTTCCT...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGTATTTGTTTATCCTTTaGCTTCTGCATGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTYLFIL*LLHDSF
Trigger: GAAGCTGTCATGCAGAAGCCAAAGGATAAACAAATA...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGACTTCAGTTGCTTTTTaGCGAACAATATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ALACKAEGLINQPMSPSLTSVAF*RTIFLA
Trigger: GGCAAGAAATATTGTTCGCCAAAAAGCAACTGAAGT...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGCAGAAAACTCTGGCATaGATCTTGGGTGACTGGATG +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTQKTLA*ILGDWM
Trigger: CATCCAGTCACCCAAGATCCATGCCAGAGTTTTCTG...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGATCTCCAAAGGCAGTTaGGATAATACCCCTGCGGTA +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTISKGS*DNTPAV
Trigger: TACCGCAGGGGTATTATCCCAACTGCCTTTGGAGAT...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CAA 72 bp CAAATTGACACCAGCCACAAGATTACGTCTACAGTGTaGTGGAAATCACTGCAAAGAATGCCATCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QIDTSHKITSTV*WKSLQRMPSPK
Trigger: TTTTGGAGATGGCATTCTTTGCAGTGATTTCCACAACACTGTAGACGTAATCTTGTGGCTGGTGTCAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGTCGTCATTCCCCAAGTaGCGAAGCTTTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMSSFPK*RSFLVR
Trigger: CCTCACCAAAAAGCTTCGTCACTTGGGGAATGACGA...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTCTTCGTTATCGCGATaGAGAACATGTGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTSSLSR*RTCDSS
Trigger: TGAAGAATCACATGTTCTTCATCGCGATAACGAAGA...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATTCATACACCATTCGGTaGTCTTCTTCAATGCTACAG +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHSYTIR*SSSMLQ
Trigger: CTGTAGCATTGAAGAAGAGCACCGAATGGTGTATGA...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTCTCCTCCACTTCAGTTaGTTTTTGGCGAACAATATT +
Preference number: 4 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGLLHFS*FLANNI
Trigger: AATATTGTTCGCCAAAAAGCAACTGAAGTGGAGGAG...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGAACAGCAATGCATCTTaGATATTCATTTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTNSNAS*IFIWFF
Trigger: GAAGAACCAAATGAATATGCAAGATGCATTGCTGTT...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACGCTGGTGACTTTCATTaGAGAATCGAAGTTATGACT +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHAGDFH*RIEVMT
Trigger: AGTCATAACTTCGATTCTGCAATGAAAGTCACCAGC...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAAACAAAGTCTTCATATaGTTGGCTTCCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYINKVFI*LASSFI
Trigger: AATGAAAGAGGAAGCCAAGCATATGAAGACTTTGTT...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAGTTCTTTCTCATTTCTaGCAAGAGGCTCTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: LVGTLNERYVLLSIPPYIVLSHF*QEALFN
Trigger: ATTAAAAAGAGCCTCTTGGCAGAAATGAGAAAGAAC...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGCAAAACTGGAGGAGATaGAGAAGACTGGTTATCCAG +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTQNWRR*RRLVIQ
Trigger: CTGGATAACCAGTCTTCTCCATCTCCTCCAGTTTTG...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGAAAGAAAAGCAACTGTaGCCACGAGGATTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTKEKQL*PRGFLP
Trigger: TGGCAGAAATCCTCGTGGCCACAGTTGCTTTTCTTT...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGTGTGTCTCACGGCACTaGCGGGAGTCCAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMCVSRH*RESKFF
Trigger: GAAAAATTTGGACTCCCGCCAGTGCCGTGAGACACA...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGCTAATAAGCCTTCCTTaGAGCCAAATGGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQLISLP*SQMGKN
Trigger: ATTTTTGCCCATTTGGCTCCAAGGAAGGCTTATTAG...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTCCGTATCTATTCACATaGGATAGTTTTCATCTACCC +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTPYLFT*DSFHLP
Trigger: GGGTAGATGAAAACTATCCCATGTGAATAGATACGG...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATGTGGACAGTGCCTTATaGTCGTATTTAAGATATCCT +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHVDSAL*SYLRYP
Trigger: AGGATATCTTAAATACGATCATAAGGCACTGTCCAC...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR TCA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGAATCACTTCCACAGTTaGGGTAGCATAGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMNHFHS*GSIVRG
Trigger: GCCCCTTACTATGCTACCTCAACTGTGGAAGTGATT...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATGGGTAAATAATGATTaGAACATCTCCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTWVNND*NISKGS
Trigger: ACTGCCTTTGGAGATGTTTCAATCATTATTTACCCA...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACAATACCTAAGAAGATATaGGCATCTCATAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTIPKKI*ASHNGH
Trigger: GTGACCATTATGAGATGCTCATATCTTCTTAGGTAT...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp CATGAACCGTATCTATTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTGTCCTGATGTGTCACTaGTTGAAAAGTTTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: HEPYLFTWDSFHLPPTLTVLMCH*LKSFQS
Trigger: ACTTTGAAAACTTTTCAAGCAGTGACACATCAGGAC...AGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAATAGATACGGTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGGAGTTGTGTCACTGTTaGTACTTTCACTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTELCHC*YFHSSV
Trigger: GACAGAAGAGTGAAAGTACCAACAGTGACACAACTC...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGAAACAGCTGCAGGTTTaGACTTCTGAACACCTCAAA +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTKQLQV*TSEHLK
Trigger: TTTGAGGTGTTCAGAAGTCCAAACCTGCAGCTGTTT...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACATTCGAGTGGAAACATaGAAAATCACTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHIRVET*KITSTV
Trigger: AACTGTGGAAGTGATTTTCCATGTTTCCACTCGAAT...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CCA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACAATTCGAGTGGAAACATaGAAAATCACTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTIRVET*KITSTV
Trigger: AACTGTGGAAGTGATTTTCCATGTTTCCACTCGAAT...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR TCA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGACAGAAGAAACAGCCTaGTTCCTTCACATCTTATCT +
Preference number: 4 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTTEETA*FLHILS
Trigger: AGATAAGATGTGAAGGAATCAGGCTGTTTCTTCTGT...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR TCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATAACAAAAATGCCTGGTaGAATACTTCATTCACGAAG +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHNKNAW*NTSFTK
Trigger: CTTCGTGAATGAAGTATTTCACCAGGCATTTTTGTT...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR GCA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGTTCCAGAAACCTACTTaGACTTCTCAGGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMFQKPT*TSQVVP
Trigger: AGGTACCACCTGAGAAGTGCAAGTAGGTTTCTGGAA...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR GCA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATAAGAAACTTGATCATTaGAATTTTCCACCCCAGATA +
Preference number: 4 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHKKLDH*NFPPQI
Trigger: TATCTGGGGTGGAAAATTGCAATGATCAAGTTTCTT...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
3UTR CAA 72 bp ATAAGGTCACCCATCTTAATCTCTTTTTCTTATAACTaGAGATCATGCTTGAATTTAAGGACTACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: IRSPILISFSYN*RSCLNLRTTAG
Trigger: GCCTGCTGTAGTCCTTAAATTCAAGCATGATCTCAAGTTATAAGAAAAAGAGATTAAGATGGGTGACCTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS GCA 90 bp AGCGGCTCGGGGATGTCGGAGGTGCTGCTGCTCCGAAGGACCTGCTaGTGCTGTCCCACTGTGAGATGGCCAGATCCGGCTGCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: SGSGMSEVLLLRRTC*CCPTVRWPDPAAGA
Trigger: TGCACCTGCAGCCGGATCTGGCCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCGAGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 90 bp CACAGCGGCTCGGGGATGTCGGAGGTGCTGCTGCTCCGAAGGACCTaGTGCTGCTGTCCCACTGTGAGATGGCCAGATCCGGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HSGSGMSEVLLLRRT*CCCPTVRWPDPAAG
Trigger: ACCTGCAGCCGGATCTGGCCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCGAGCCGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS TCA 90 bp AAGGGGCCGTCTGCCCGGTGCTGCCATTGCGCTGAAGGCCACCCATaGACCCACAGTGGGTGGAGAGATCCACCTCCCATCCAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: KGPSARCCHCAEGHP*THSGWRDPPPIQVQ
Trigger: CTGGACTTGGATGGGAGGTGGATCTCTCCACCCACTGTGGGTTCATGGGTGGCCTTCAGCGCAATGGCAGCACCGGGCAGACGGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000202677.12
ENST00000427175.2
ENST00000430436.5
ENST00000620717.4
CDS GCA 90 bp GGCTCGGGGATGTCGGAGGTGCTGCTGCTCCGAAGGACCTGCTGCTaGTGTCCCACTGTGAGATGGCCAGATCCGGCTGCAGGTGCATTT +
Preference number: 5 (lower is better)
Translates to: GSGMSEVLLLRRTCC*CPTVRWPDPAAGAF
Trigger: AAATGCACCTGCAGCCGGATCTGGCCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CCA 90 bp CCAGCAAGGGGGCTCTGGCCGAATGCTGCTCCTCTAGGACTGCTGTaGACACGGGGTGGAGAAGGACACTCACGGGCAATGCCATGCACC +
Preference number: 5 (lower is better)
Translates to: PARGLWPNAAPLGLL*TRGGEGHSRAMPCT
Trigger: GGTGCATGGCATTGCCCGTGAGTGTCCTTCTCCACCCCGTGTCCACAGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGCCCCCTTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGACAGCCCTGCTGGCGTaGATGCACGTGGCACATACA +
Preference number: 5 (lower is better)
Translates to: GACASSSSLLTDFSAAGRTALLA*MHVAHT
Trigger: TGTATGTGCCACGTGCATCAACGCCAGCAGGGCTGT...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGTGCAGCGTGAGGCTTTaGGAGGCACAAGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: VAAISGDVCFLGVAAWAACSVRL*EAQGHS
Trigger: CGAATGGCCTTGTGCCTCCAAAAGCCTCACGCTGCA...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp GCTCTGGCCGAATGCTGCTCCTCTAGGACTGCTGTGGACACGGGGTaGAGAAGGACACTCACGGGCAATGCCATGCACCAGTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: ALAECCSSRTAVDTG*RRTLTGNAMHQSKR
Trigger: CCTCTTGGACTGGTGCATGGCATTGCCCGTGAGTGTCCTTCTCCACCCCGTGTCCACAGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGGTTGGGTGTACGTGCTaGAGCCACACACACAGCAGT +
Preference number: 5 (lower is better)
Translates to: GACASSSSLLTDFSAAGRVGCTC*SHTHSS
Trigger: ACTGCTGTGTGTGTGGCTCAAGCACGTACACCCAAC...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCAGGAGAGGGCTCACCATaGCTTCTCTTTTCATTCATT +
Preference number: 5 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSGEGSP*LLFSFI
Trigger: AATGAATGAAAAGAGAAGCAATGGTGAGCCCTCTCC...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp AGTCTTCGGTCCGACAAGGTGCTGCTGTTAGAATGGCTTTTGTCCTaGTCCGTGGGCCCACCACCATCCAGCTCAGGCGCTCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SLRSDKVLLLEWLLS*SVGPPPSSSGALSC
Trigger: GCAGGAGAGAGCGCCTGAGCTGGATGGTGGTGGGCCCACGGAGCAGGACAAAAGCCATTCTAACAGCAGCACCTTGTCGGACCGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp GACGTGGTGGCACTCCTAAATCGCATCGGTTCGGTCACATCTGGGTaGCTCCGCCAGCTGAGAGAAAAGGACCTCCCCACGGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: DVVALLNRIGSVTSG*LRQLREKDLPTVVP
Trigger: AGGAACCACCGTGGGGAGGTCCTTTTCTCTCAGCTGGCGGAGCCACCCAGATGTGACCGAACCGATGCGATTTAGGAGTGCCACCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CCA 90 bp TCCAGACGTGGTGGCACTCCTAAATCGCATCGGTTCGGTCACATCTaGGTGGCTCCGCCAGCTGAGAGAAAAGGACCTCCCCACGGTGGT +
Preference number: 5 (lower is better)
Translates to: SRRGGTPKSHRFGHI*VAPPAERKGPPHGG
Trigger: ACCACCGTGGGGAGGTCCTTTTCTCTCAGCTGGCGGAGCCACCCAGATGTGACCGAACCGATGCGATTTAGGAGTGCCACCACGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTACCAGGAAATCTGAGTTaGGCAGAACGTCCTGGCGTC +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVPGNLS*AERPGV
Trigger: GACGCCAGGACGTTCTGCCAAACTCAGATTTCCTGG...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGAAGGATTTCTTCCATaGGGTGCTAAGCAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAEGFLP*GAKQPS
Trigger: GGAAGGCTGCTTAGCACCCAATGGAAGAAATCCTTC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGATCCCCCTCCTCAACTaGAGAAGAGTCTTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: VAAISGDVCFLGVAAWAAIPLLN*RRVFLR
Trigger: CCTCAGAAAGACTCTTCTCAAGTTGAGGAGGGGGAT...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTATGGGGAGGGCTGCCCTaGGCTGGTGACTTTCATTGC +
Preference number: 5 (lower is better)
Translates to: TGLALPEASESYHILAQLWGGLP*AGDFHC
Trigger: GCAATGAAAGTCACCAGCCAAGGGCAGCCCTCCCCA...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGATGGGGAGGGCTGCCCTaGGCTGGTGACTTTCATTGC +
Preference number: 5 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRWGGLP*AGDFHC
Trigger: GCAATGAAAGTCACCAGCCAAGGGCAGCCCTCCCCA...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp TCCTGCTCCGTGGGCCCACCACCATCCAGCTCAGGCGCTCTCTCCTaGACAGCACCACCACCAACAGTCTGGATGATTTTAGGCAATACA +
Preference number: 5 (lower is better)
Translates to: SCSVGPPPSSSGALS*TAPPPTVWMILGNT
Trigger: TGTATTGCCTAAAATCATCCAGACTGTTGGTGGTGGTGCTGTGCAGGAGAGAGCGCCTGAGCTGGATGGTGGTGGGCCCACGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp AACACCTCAAAGGACAGCTCGGAGCCTTCCACATGGGCATTGTCATaGTTCTCGCTGACAAGGCTGTGCAGTATGGCAGGGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: NTSKDSSEPSTWALS*FSLTRLCSMAGPPL
Trigger: CAGTGGGGGCCCTGCCATACTGCACAGCCTTGTCAGCGAGAACCATGACAATGCCCATGTGGAAGGCTCCGAGCTGTCCTTTGAGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp CTTCACAGCCCTGCTGGCGTTGATGCACGTGGCACATACAAGGCTTaGCAGCAGCTTCCCACTCACTATGGCTCCATCAAACAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LHSPAGVDARGTYKA*QQLPTHYGSIKQRP
Trigger: GGGCCTCTGTTTGATGGAGCCATAGTGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCCACGTGCATCAACGCCAGCAGGGCTGTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000202677.12
ENST00000427175.2
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAACACTAGGGCTGGGATaGATGAGTGTCTCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVTLGLG*MSVSSV
Trigger: CACACTGGAGACACTCATCAATCCCAGCCCTAGTGT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp TCTGCTGCAGGACGGGCAAGGCCCACCCAGGGCGCCCCAGCAGGAGAGGGCTCATTTTTCAGCATCTTCTaGGGCAACATCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: SAAGRARPTQGAPAGEGSFFSIF*GNIFSI
Trigger: GATAGAAAAGATGTTGCCCAAGAAGATGCTGAAAAA...TGAGCCCTCTCCTGCTGGGGCGCCCTGGGTGGGCCTTGCCCGTCCTGCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGACAGCCCTGCTGGCGTaGATGCACGTGGCACATACA +
Preference number: 5 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLTALLA*MHVAHT
Trigger: TGTATGTGCCACGTGCATCAACGCCAGCAGGGCTGT...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAACAGGAGCAGCAAAGTaGCAGCGTGAGGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVTGAAK*QREAFG
Trigger: TCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGTCCCACTGCAGGGCGTaGCTCTGTACCTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVSHCRA*LCTWPL
Trigger: CAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGGA...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACCCTATGTCACCAAGTTaGGGTCACCCCACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHPMSPS*GHPTSP
Trigger: TGGGGAAGTGGGGTGACCCAAACTTGGTGACATAGG...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp ACGGGCATCAGCATCAGCCACAACATCTGTGGGAGTATTCAGTTCTaGGTCTTCCTCACAGGTCTGCCATGGGCCCATGGACAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TGISISHNICGSIQF*VFLTGLPWAHGQLC
Trigger: GCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACTCCCACAGATGTTGTGGCTGATGCTGATGCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTACTCCATAAACGGTTCTaGCAAGCACTGCTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVLHKRF*QALLSR
Trigger: CCTTGACAGCAGTGCTTGCAAGAACCGTTTATGGAG...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTTCACCTGAGGGTGGCTaGTACACTGTGCAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PGRCENKACAVAMDSGKLSPEGG*YTVQAL
Trigger: AAGAGCTTGCACAGTGTACAAGCCACCCTCAGGTGA...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACCCTTCCACATGGGCATaGTCATGGTTCTCGCTGACA +
Preference number: 5 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHPSTWA*SWFSLT
Trigger: TGTCAGCGAGAACCATGACAATGCCCATGTGGAAGG...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GTTTTAATCCGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTTGGGCTGGGGAGGGCTGCCCTaGGCTGGTGACTTTCATTGC +
Preference number: 5 (lower is better)
Translates to: VLIRSAEGVAGRGRKDLGWGGLP*AGDFHC
Trigger: GCAATGAAAGTCACCAGCCAAGGGCAGCCCTCCCCA...GCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CAA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTATGGCACATACAAGGCTaGGCAGCAGCTTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: TGLALPEASESYHILAQLWHIQG*AAASHS
Trigger: TGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCCA...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAAGAGGGAGAAAAGACTaGGGCTGCGAAATCCTCGAA +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVRGRKD*GCEILE
Trigger: TTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGAGAAAATGCCAGGACTaGCAGTCACTCTTCACATTG +
Preference number: 5 (lower is better)
Translates to: GACASSSSLLTDFSAAGRRKCQD*QSLFTL
Trigger: CAATGTGAAGAGTGACTGCAAGTCCTGGCATTTTCT...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GTGGCTGCCATCAGTGGAGATGTGTGCTTTCTCGGTGTGGCTGCCTGGGCCGCGGATGGTTGTTTCATGTaGAATTTCCCTCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: VAAISGDVCFLGVAAWAADGCFM*NFPRMQ
Trigger: CTGCATCCGAGGGAAATTCAACATGAAACAACCATC...CGCGGCCCAGGCAGCCACACCGAGAAAGCACACATCTCCACTGATGGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACTGTACACACAGAGGTTaGCTCGGATCCAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHCTHRG*LGSKLP
Trigger: TGGTAGCTTGGATCCGAGCAAACCTCTGTGTGTACA...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGTGTACACACAGAGGTTaGCTCGGATCCAAGCTACCA +
Preference number: 5 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRCTHRG*LGSKLP
Trigger: TGGTAGCTTGGATCCGAGCAAACCTCTGTGTGTACA...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCAAGTCCCCCACCAGCATaGAGAAGCCAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPSPPPA*RSQENP
Trigger: TGGGTTTTCCTGGCTTCTCAATGCTGGTGGGGGACT...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp TTCTGGGTCTTCCTCACAGGTCTGCCATGGGCCCATGGACAGCTCTaGCTCATTGGTACAGCCCAGAGTTGTGTCACTGTTGGTACTTTC +
Preference number: 5 (lower is better)
Translates to: FWVFLTGLPWAHGQL*LIGTAQSCVTVGTF
Trigger: GAAAGTACCAACAGTGACACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp ACAACATCTGTGGGAGTATTCAGTTCTGGGTCTTCCTCACAGGTCTaGCATGGGCCCATGGACAGCTCTGCCTCATTGGTACAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TTSVGVFSSGSSSQV*HGPMDSSASLVQPR
Trigger: TCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACTCCCACAGATGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp GAGTATTCAGTTCTGGGTCTTCCTCACAGGTCTGCCATGGGCCCATaGACAGCTCTGCCTCATTGGTACAGCCCAGAGTTGTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: EYSVLGLPHRSAMGP*TALPHWYSPELCHC
Trigger: ACAGTGACACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp ATCTGTGGGAGTATTCAGTTCTGGGTCTTCCTCACAGGTCTGCCATaGGCCCATGGACAGCTCTGCCTCATTGGTACAGCCCAGAGTTGT +
Preference number: 5 (lower is better)
Translates to: ICGSIQFWVFLTGLP*AHGQLCLIGTAQSC
Trigger: ACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACTCCCACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAGCTCTTCTGCACAGTTaGTCTGAAGTGCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: TGLALPEASESYHILAQLALLHS*SEVLEA
Trigger: GGCTTCAAGCACTTCAGACAAACTGTGCAGAAGAGC...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCCTACAGAGGCTGGAGTaGCTGAGTCTTCGGTCCGAC +
Preference number: 5 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPLQRLE*LSLRSD
Trigger: GTCGGACCGAAGACTCAGCAACTCCAGCCTCTGTAG...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GGGGCCTGCGCCAGCAGCTCTTCGCTGCTGACTGATTTCTCTGCTGCAGGACGGCTTGAACTACTTTTCTaGTTACAGCTATCTCACAGG +
Preference number: 5 (lower is better)
Translates to: GACASSSSLLTDFSAAGRLELLF*LQLSHR
Trigger: CCTGTGAGATAGCTGTAACAAGAAAAGTAGTTCAAG...CCGTCCTGCAGCAGAGAAATCAGTCAGCAGCGAAGAGCTGCTGGCGCAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACTGGTACAGCCCAGAGTaGTGTCACTGTTGGTACTTT +
Preference number: 5 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHWYSPE*CHCWYF
Trigger: AAAGTACCAACAGTGACACAACTCTGGGCTGTACCA...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAAAGCTTCCTTCCACTTaGGGGCACCCTCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRKLPST*GHPHSL
Trigger: AAGAGAATGAGGGTGCCCCAAAGTGGAAGGAAGCTT...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAGATGGTTGTTTCATGTaGAATTTCCCTCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVDGCFM*NFPRMQ
Trigger: CTGCATCCGAGGGAAATTCAACATGAAACAACCATC...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp TCGGGGCTCCACTGGGGAGGGCTGCCCTTGGCTGGTGACTTTCATTaGAGAATCGAAGTTATGACTCTGGATATACTCATCCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SGLHWGGLPLAGDFH*RIEVMTLDILILLS
Trigger: GCTCAAGAGGATGAGTATATCCAGAGTCATAACTTCGATTCTGCAATGAAAGTCACCAGCCAAGGGCAGCCCTCCCCAGTGGAGCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTGTTAGAATGGCTTTaGTCCTGCTCCGTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVLLEWL*SCSVGP
Trigger: TGGGCCCACGGAGCAGGACAAAAGCCATTCTAACAG...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGCTACAGAGGCTGGAGTaGCTGAGTCTTCGGTCCGAC +
Preference number: 5 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQLQRLE*LSLRSD
Trigger: GTCGGACCGAAGACTCAGCAACTCCAGCCTCTGTAG...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTAAAGGAGTCCATAATGTaGGCCCACTCGTTTATAAGT +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVKESIM*AHSFIS
Trigger: ACTTATAAACGAGTGGGCCAACATTATGGACTCCTT...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGACAGCTCTGCCTCATaGGTACAGCCCAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPDSSAS*VQPRVV
Trigger: CACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTC...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCACTCTGGCATGGATCTaGGGTGACTGGATGTTATTC +
Preference number: 5 (lower is better)
Translates to: PCSTFHLQTKAATENGRLTLAWI*GDWMLF
Trigger: GAATAACATCCAGTCACCCAAGATCCATGCCAGAGT...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCCCAGGAAATCTGAGTTaGGCAGAACGTCCTGGCGTC +
Preference number: 5 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPPGNLS*AERPGV
Trigger: GACGCCAGGACGTTCTGCCAAACTCAGATTTCCTGG...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTAGTCCCCCACCAGCATaGAGAAGCCAGGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPASPPPA*RSQENP
Trigger: TGGGTTTTCCTGGCTTCTCAATGCTGGTGGGGGACT...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCATGGCACATACAAGGCTaGGCAGCAGCTTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPWHIQG*AAASHS
Trigger: TGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCCA...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGGTGGTTCTGAATTATaGCTTCGAGATACAGAGCTC +
Preference number: 5 (lower is better)
Translates to: PGRCENKACAVAMDSGKLGGSEL*LRDTEL
Trigger: GAGCTCTGTATCTCGAAGCAATAATTCAGAACCACC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GAAGCGCCTCTGCGTGGTGAGGAGAGCCTCTGCTTAGTTAGCGGGCGTCAGGTATCTAATAAGCCTTCCTaGGAGCCAAATGGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: EAPLRGEESLCLVSGRQVSNKPS*EPNGQK
Trigger: TTTTTGCCCATTTGGCTCCAAGGAAGGCTTATTAGA...TACCTGACGCCCGCTAACTAAGCAGAGGCTCTCCTCACCACGCAGAGGCGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGATTTGCTGCCTACAATaGAATTTCCCACCCCAAGGT +
Preference number: 5 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRICCLQ*NFPPQG
Trigger: ACCTTGGGGTGGGAAATTCAATTGTAGGCAGCAAAT...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp TCAGTTGTAACCAATGACGGGCATCAGCATCAGCCACAACATCTGTaGGAGTATTCAGTTCTGGGTCTTCCTCACAGGTCTGCCATGGGC +
Preference number: 5 (lower is better)
Translates to: SVVTNDGHQHQPQHL*EYSVLGLPHRSAMG
Trigger: GCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACTCCCACAGATGTTGTGGCTGATGCTGATGCCCGTCATTGGTTACAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp TTTGGACTTCTGAACACCTCAAAGGACAGCTCGGAGCCTTCCACATaGGCATTGTCATGGTTCTCGCTGACAAGGCTGTGCAGTATGGCA +
Preference number: 5 (lower is better)
Translates to: FGLLNTSKDSSEPST*ALSWFSLTRLCSMA
Trigger: TGCCATACTGCACAGCCTTGTCAGCGAGAACCATGACAATGCCCATGTGGAAGGCTCCGAGCTGTCCTTTGAGGTGTTCAGAAGTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp AGGAGGAGCGGGACGCTTTTAGTGGCAGGCAAAGCCTCAGAAAGGTaGACACAGTTGCTGATAGACTGGCTTCGCTTAGCAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: RRSGTLLVAGKASER*TQLLIDWLRLAVAF
Trigger: AAAAGCAACTGCTAAGCGAAGCCAGTCTATCAGCAACTGTGTCCACCTTTCTGAGGCTTTGCCTGCCACTAAAAGCGTCCCGCTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495793.2
CDS-3UTR CAA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTTCTAGAACACAGCCTTaGCCTCGTTGCTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTSRTQP*PRCFFS
Trigger: GGAAAAGAAGCAACGAGGCAAAGGCTGTGTTCTAGA...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACACTCCTCCACTTCAGTaGCTTTTTGGCGAACAATAT +
Preference number: 5 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHTPPLQ*LFGEQY
Trigger: ATATTGTTCGCCAAAAAGCAACTGAAGTGGAGGAGT...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTATCACCTGAGGGTGGCTaGTACACTGTGCAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALSPEGG*YTVQAL
Trigger: AAGAGCTTGCACAGTGTACAAGCCACCCTCAGGTGA...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGGCCACGATTTTGTaGGGAAACTTCAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFWATIL*GNFRVT
Trigger: AGTAACTCTGAAGTTTCCCAACAAAATCGTGGCCCA...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCGCAGAATCTTTTCCTGCTGTCATCTGCCCAGAGCAGCCACACCAGTGCCCACTCCTCAATTAGACAATaGTTTTGCCAGCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: AQNLFLLSSAQSSHTSAHSSIRQ*FCQPLC
Trigger: ACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGA...GTGGGCACTGGTGTGGCTGCTCTGGGCAGATGACAGCAGGAAAAGATTCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CAA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTGGAGAGGGCTCACCATaGCTTCTCTTTTCATTCATT +
Preference number: 5 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFGEGSP*LLFSFI
Trigger: AATGAATGAAAAGAGAAGCAATGGTGAGCCCTCTCC...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTAGAAAATGCCAGGACTaGCAGTCACTCTTCACATTG +
Preference number: 5 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFRKCQD*QSLFTL
Trigger: CAATGTGAAGAGTGACTGCAAGTCCTGGCATTTTCT...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTAGATCTGCATGAGCTCTaGCTTGTAAGGCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALDLHEL*LVRLRV
Trigger: GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATC...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 90 bp CTGTCCCACTGTGAGATGGCCAGATCCGGCTGCAGGTGCATTTTCTaGCTGTTGACACTCCTCCACTTCAGTTGCTTTTTGGCGAACAAT +
Preference number: 5 (lower is better)
Translates to: LSHCEMARSGCRCIF*LLTLLHFSCFLANN
Trigger: ATTGTTCGCCAAAAAGCAACTGAAGTGGAGGAGTGTCAACAGTCAGAAAATGCACCTGCAGCCGGATCTGGCCATCTCACAGTGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp AGTTGCTTTTTGGCGAACAATATTTCTTGCCTTTTCCACTCCCGGTaGTCCAGACGTGGTGGCACTCCTAAATCGCATCGGTTCGGTCAC +
Preference number: 5 (lower is better)
Translates to: SCFLANNISCLFHSR*SRRGGTPKSHRFGH
Trigger: GTGACCGAACCGATGCGATTTAGGAGTGCCACCACGTCTGGAGCACCGGGAGTGGAAAAGGCAAGAAATATTGTTCGCCAAAAAGCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 90 bp CGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTTGGGCTaGGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTGAATTAT +
Preference number: 5 (lower is better)
Translates to: RSAEGVAGRGRKDLG*EILECHYFAVVLNY
Trigger: ATAATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp CGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTTGGGCTaGGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTGAATATT +
Preference number: 5 (lower is better)
Translates to: RSAEGVAGRGRKDLG*EILECHYFAVVLNI
Trigger: AATATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CAA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTGTTTGTCTGAAGTGCTaGAAGCCACAGAAGAAACAG +
Preference number: 5 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPVCLKC*KPQKKQ
Trigger: CTGTTTCTTCTGTGGCTTCAAGCACTTCAGACAAAC...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAACTCCTCCACTTCAGTaGCTTTTTGGCGAACAATAT +
Preference number: 5 (lower is better)
Translates to: TGLALPEASESYHILAQLTPPLQ*LFGEQY
Trigger: ATATTGTTCGCCAAAAAGCAACTGAAGTGGAGGAGT...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGAGAGTTGTGTCACTGTaGGTACTTTCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: PRAATPVPTCQWVHLWFLRVVSL*VLSLFC
Trigger: ACAGAAGAGTGAAAGTACCAACAGTGACACAACTCT...CAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGGATTATCCCGTATCTTaGCTAGTTTGTACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRDYPVS*LVCTRV
Trigger: AACTCTGGTACAAACTAGCAAAGATACGGGATAATC...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGCTCCTGTCAGTGGGCCTGGCCTTGGGCCACGATTTTGTaGGGAAACTTCAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: HSLLFRWFSRCSCQWAWPWATIL*GNFRVT
Trigger: AGTAACTCTGAAGTTTCCCAACAAAATCGTGGCCCA...AGGCCAGGCCCACTGACAGGAGCACCTTGAGAACCACCTGAACAGAAGAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAGTTGGGTGTACGTGCTaGAGCCACACACACAGCAGT +
Preference number: 5 (lower is better)
Translates to: TLPVLQELMQGQDPVFLEVGCTC*SHTHSS
Trigger: ACTGCTGTGTGTGTGGCTCAAGCACGTACACCCAAC...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTAATGATTTCCTTCTCTaGGTCATAGTTCATGCCACA +
Preference number: 5 (lower is better)
Translates to: PGRCENKACAVAMDSGKLNDFLL*VIVHAT
Trigger: TGTGGCATGAACTATGACCAAGAGAAGGAAATCATT...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TGCCCAGAGCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTCCTCAATTAGACAATaGTTTTGCCAGCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: CPEQPHQCPRVSGFISGFSSIRQ*FCQPLC
Trigger: ACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGA...AAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGCTCTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CAA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGTGCAGCGTGAGGCTTTaGGAGGCACAAGGCCATTCG +
Preference number: 5 (lower is better)
Translates to: ALACKAEGLINQPMSPSLCSVRL*EAQGHS
Trigger: CGAATGGCCTTGTGCCTCCAAAAGCCTCACGCTGCA...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATTCCCACTGCAGGGCGTaGCTCTGTACCTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHSHCRA*LCTWPL
Trigger: CAGCGGCCAGGTACAGAGCAACGCCCTGCAGTGGGA...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGGGGGTTACAGGAGGGTaGAGTTATTTGCTGCCTACA +
Preference number: 5 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVGVTGG*SYLLPT
Trigger: TGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCC...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGAACCGCAGACTTTGTaGCTGAGGCAACCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: WLLGTADFVAEATQAKFLEPQTL*LRQPRL
Trigger: TAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCCTATGTCACCAAGTTaGGGTCACCCCACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: WLLGTADFVAEATQAKFLPMSPS*GHPTSP
Trigger: TGGGGAAGTGGGGTGACCCAAACTTGGTGACATAGG...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGGATCTGCATGAGCTCTaGCTTGTAAGGCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQDLHEL*LVRLRV
Trigger: GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATC...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 90 bp GTCAGCCAGGGTCAGTATGTAGTGACTCTGTTGGGTGTACGTGCTTaGGCCACACACACAGCAGTGCAAAACCCTGTAGATATAATCCAG +
Preference number: 5 (lower is better)
Translates to: VSQGQYVVTLLGVRA*ATHTAVQNPVDIIQ
Trigger: CTGGATTATATCTACAGGGTTTTGCACTGCTGTGTGTGTGGCTCAAGCACGTACACCCAACAGAGTCACTACATACTGACCCTGGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp AGACTGGCTTCGCTTAGCAGTTGCTTTTTGGCGAACAATATTTCTTaGCTTTTCCACTCCCGGTGCTCCAGACGTGGTGGCACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: RLASLSSCFLANNIS*LFHSRCSRRGGTPK
Trigger: TTTAGGAGTGCCACCACGTCTGGAGCACCGGGAGTGGAAAAGGCAAGAAATATTGTTCGCCAAAAAGCAACTGCTAAGCGAAGCCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495793.2
CDS-3UTR CAA 90 bp CCTGGCCGCTGTGAGAACAAAGCCTGCGCAGTGGCGATGGACTCTGGTAAGCTTGAAGCTTCTTTAAAGTaGAGCCTATACTCTGGTAAT +
Preference number: 5 (lower is better)
Translates to: PGRCENKACAVAMDSGKLEASLK*SLYSGN
Trigger: ATTACCAGAGTATAGGCTCAACTTTAAAGAAGCTTC...AAGCTTACCAGAGTCCATCGCCACTGCGCAGGCTTTGTTCTCACAGCGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGATTTACAAGCATCAACTaGTTCTTTCAAGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRFTSIN*FFQEHR
Trigger: CCTGTGCTCTTGAAAGAACAAGTTGATGCTTGTAAA...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAGATTATCCCGTATCTTaGCTAGTTTGTACCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TGLALPEASESYHILAQLDYPVS*LVCTRV
Trigger: AACTCTGGTACAAACTAGCAAAGATACGGGATAATC...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCCTTCCACTTTGGGGCACCCTCATTCTCTTCTGTTCAGGTGGTTCTCAAGGTGACCTGGGCCACGATTTaGTTGGGAAACTTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SFHFGAPSFSSVQVVLKVTWATI*LGNFRV
Trigger: AACTCTGAAGTTTCCCAACAAAATCGTGGCCCAGGT...CACCTTGAGAACCACCTGAACAGAAGAGAATGAGGGTGCCCCAAAGTGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CTCTTCACATTGCCCTTCAGCCCCCGTGAGTATCCTGGGCCCTTCCCAAAACGGATGTTTTCAAGTAATTaGTCAAGAACATCATCCCCC +
Preference number: 5 (lower is better)
Translates to: LFTLPFSPREYPGPFPKRMFSSN*SRTSSP
Trigger: GGGGGATGATGTTCTTGACAAATTACTTGAAAACAT...CCGTTTTGGGAAGGGCCCAGGATACTCACGGGGGCTGAAGGGCAATGTGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACTGGCCTGGCCCTGCCTGAGGCCAGCGAGTCTTACCACATTTTGGCCCAATTAAAAGGCATTCAGGACTaGTATGGCCAATGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: TGLALPEASESYHILAQLKGIQD*YGQCFQ
Trigger: TTGAAAACATTGGCCATACAAGTCCTGAATGCCTTT...TAATTGGGCCAAAATGTGGTAAGACTCGCTGGCCTCAGGCAGGGCCAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTATCCTCTTGAGCATTTaGGCGCAAAATGACCTCAAT +
Preference number: 5 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTILLSI*AQNDLN
Trigger: ATTGAGGTCATTTTGCGCCAAAATGCTCAAGAGGAT...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTTGGCACATACAAGGCTaGGCAGCAGCTTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFWHIQG*AAASHS
Trigger: TGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCCA...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS-3UTR CAA 90 bp GCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTTAATCCGTACAGCCCTGCTGGCGTaGATGCACGTGGCACATACA +
Preference number: 5 (lower is better)
Translates to: ARAPCSNIEMRPLRVLIRTALLA*MHVAHT
Trigger: TGTATGTGCCACGTGCATCAACGCCAGCAGGGCTGT...ACGGATTAAAACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CAA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTTCCTCAATTAGACAATaGTTTTGCCAGCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTSSIRQ*FCQPLC
Trigger: ACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGA...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS-3UTR CAA 90 bp CCCTGCTCCACGTTCCATCTCCAGACCAAAGCTGCTACTGAGAATGGCAGGCTCGGAGGGTTGAGTTATTaGCTGCCTACAATTGAATTT +
Preference number: 5 (lower is better)
Translates to: PCSTFHLQTKAATENGRLGGLSY*LPTIEF
Trigger: AAATTCAATTGTAGGCAGCAAATAACTCAACCCTCC...GAGCCTGCCATTCTCAGTAGCAGCTTTGGTCTGGAGATGGAACGTGGAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCTCGCCAGAGTCTTACCACATTTaGGCCCAATTAGGGCCACTT +
Preference number: 5 (lower is better)
Translates to: VSGPGLQSPIKQKSKFSPESYHI*AQLGPL
Trigger: AAGTGGCCCTAATTGGGCCAAAATGTGGTAAGACTC...TGGCGAGAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGGAACCGCAGACTTTGTaGCTGAGGCAACCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKEPQTL*LRQPRL
Trigger: TAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTC...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp CGTGTTGACAAGAGAATCCGCTGTACCATTTCATACACCATTCGGTaGTCTTCTTCAATGCTACAGAGGCTGGAGTTGCTGAGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: RVDKRIRCTISYTIR*SSSMLQRLELLSLR
Trigger: CCGAAGACTCAGCAACTCCAGCCTCTGTAGCATTGAAGAAGAGCACCGAATGGTGTATGAAATGGTACAGCGGATTCTCTTGTCAACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp TTGACACTCCTCCACTTCAGTTGCTTTTTGGCGAACAATATTTCTTaGCTTTTCCACTCCCGGTGCTCCAGACGTGGTGGCACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: LTLLHFSCFLANNIS*LFHSRCSRRGGTPK
Trigger: TTTAGGAGTGCCACCACGTCTGGAGCACCGGGAGTGGAAAAGGCAAGAAATATTGTTCGCCAAAAAGCAACTGAAGTGGAGGAGTGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp CCAGGAAATCTGAGTTTGGCAGAACGTCCTGGCGTCTGGTCATCATaGCACAGATCAGCCTGTAGGCTTGTAGTTTGCCTTCCTTATATT +
Preference number: 5 (lower is better)
Translates to: PGNLSLAERPGVWSS*HRSACRLVVCLPYI
Trigger: AATATAAGGAAGGCAAACTACAAGCCTACAGGCTGATCTGTGCCATGATGACCAGACGCCAGGACGTTCTGCCAAACTCAGATTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp AAAAATGCACCAGGAAATCTGAGTTTGGCAGAACGTCCTGGCGTCTaGTCATCATGGCACAGATCAGCCTGTAGGCTTGTAGTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: KNAPGNLSLAERPGV*SSWHRSACRLVVCL
Trigger: AAGGCAAACTACAAGCCTACAGGCTGATCTGTGCCATGATGACCAGACGCCAGGACGTTCTGCCAAACTCAGATTTCCTGGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CTGAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCTCCATAAACGGTTCTaGCAAGCACTGCTGTCAAGG +
Preference number: 5 (lower is better)
Translates to: LRALVQQRNFLEILGLVALHKRF*QALLSR
Trigger: CCTTGACAGCAGTGCTTGCAAGAACCGTTTATGGAG...AGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp ACGGTAGTGGGATTCACCATGGGCTTCAGAAGTCCACTAATGGGAAGACCTGCTACAGCCTTTGCCTCGTaGCTTCTTTTCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: TVVGFTMGFRSPLMGRPATAFAS*LLFLLF
Trigger: GAACAAAAGGAAAAGAAGCAACGAGGCAAAGGCTGT...AGCAGGTCTTCCCATTAGTGGACTTCTGAAGCCCATGGTGAATCCCACTACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCTTCCCTACATTTTCCTaGTGTCTGCTGCAAATCATC +
Preference number: 5 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVFPTFS*CLLQII
Trigger: GATGATTTGCAGCAGACACAAGGAAAATGTAGGGAA...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGCCTTCCACATGGGCATaGTCATGGTTCTCGCTGACA +
Preference number: 5 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKPSTWA*SWFSLT
Trigger: TGTCAGCGAGAACCATGACAATGCCCATGTGGAAGG...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAGAAGGATTTCTTCCATaGGGTGCTAAGCAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: TLPVLQELMQGQDPVFLEEGFLP*GAKQPS
Trigger: GGAAGGCTGCTTAGCACCCAATGGAAGAAATCCTTC...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCCCGCCCTTCCGACAGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAATGTTTTCAAGTAATTaGTCAAGAACATCATCCCCC +
Preference number: 5 (lower is better)
Translates to: ARPSDRNDWLSSFSFVPRMFSSN*SRTSSP
Trigger: GGGGGATGATGTTCTTGACAAATTACTTGAAAACAT...TCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCTGTCGGAAGGGCGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTAATGATTTCCTTCTCTaGGTCATAGTTCATGCCACA +
Preference number: 5 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTNDFLL*VIVHAT
Trigger: TGTGGCATGAACTATGACCAAGAGAAGGAAATCATT...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CAACAGACAGGAGCAGCAAAGTTGCAGCGTGAGGCTTTTGGAGGCACAAGGCCAGATATACTCATCCTCTaGAGCATTTTGGCGCAAAAT +
Preference number: 5 (lower is better)
Translates to: QQTGAAKLQREAFGGTRPDILIL*SILAQN
Trigger: ATTTTGCGCCAAAATGCTCAAGAGGATGAGTATATC...TGGCCTTGTGCCTCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGGTGGTTCTGAATTATaGCTTCGAGATACAGAGCTC +
Preference number: 5 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPGGSEL*LRDTEL
Trigger: GAGCTCTGTATCTCGAAGCAATAATTCAGAACCACC...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACACTTCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAAAGAGGGAGAAAAGACTaGGGCTGCGAAATCCTCGAA +
Preference number: 5 (lower is better)
Translates to: TLPVLQELMQGQDPVFLERGRKD*GCEILE
Trigger: TTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCT...TTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGACAGGAGCAGCAAAGTaGCAGCGTGAGGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: ALACKAEGLINQPMSPSLTGAAK*QREAFG
Trigger: TCCAAAAGCCTCACGCTGCAACTTTGCTGCTCCTGT...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTATTTGCTGCCTACAATaGAATTTCCCACCCCAAGGT +
Preference number: 5 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPICCLQ*NFPPQG
Trigger: ACCTTGGGGTGGGAAATTCAATTGTAGGCAGCAAAT...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 90 bp GGAAACTTCAGAGTTACTCCTATCACATTGATGGCCTCTTTCACCTaGGGGTGGCTTGTACACTGTGCAAGCTCTTCACATATCCAGACC +
Preference number: 5 (lower is better)
Translates to: GNFRVTPITLMASFT*GWLVHCASSSHIQT
Trigger: GGTCTGGATATGTGAAGAGCTTGCACAGTGTACAAGCCACCCTCAGGTGAAAGAGGCCATCAATGTGATAGGAGTAACTCTGAAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp ACAAGTCAGCCAGGGTCAGTATGTAGTGACTCTGTTGGGTGTACGTaGTTGAGCCACACACACAGCAGTGCAAAACCCTGTAGATATAAT +
Preference number: 5 (lower is better)
Translates to: TSQPGSVCSDSVGCT*LSHTHSSAKPCRYN
Trigger: ATTATATCTACAGGGTTTTGCACTGCTGTGTGTGTGGCTCAAGCACGTACACCCAACAGAGTCACTACATACTGACCCTGGCTGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCAGCCACACCAGTGCCCACGTGTCAGTGGGTTCATCTCTGGTTTTTGGTGACTTTTTTCAGCATCTTCTaGGGCAACATCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: AATPVPTCQWVHLWFLVTFFSIF*GNIFSI
Trigger: GATAGAAAAGATGTTGCCCAAGAAGATGCTGAAAAA...AGTCACCAAAAACCAGAGATGAACCCACTGACACGTGGGCACTGGTGTGGCTGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGAGTCTCCCCGTTTTCCCAAGGAGTCCATAATGTaGGCCCACTCGTTTATAAGT +
Preference number: 5 (lower is better)
Translates to: SFSFVPRVSLAPESPRFPKESIM*AHSFIS
Trigger: ACTTATAAACGAGTGGGCCAACATTATGGACTCCTT...GGGAAAACGGGGAGACTCAGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GATGTGCATGGCTCTGTGGATCTGCATGAGCTCTTGCTTGTAAGGCTGAGGGTCTATCCAGAGGTAGGTTaGTCATCTCAACTCCATAAA +
Preference number: 5 (lower is better)
Translates to: DVHGSVDLHELLLVRLRVYPEVG*SSQLHK
Trigger: TTTATGGAGTTGAGATGACAAACCTACCTCTGGATA...GACCCTCAGCCTTACAAGCAAGAGCTCATGCAGATCCACAGAGCCATGCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCCTGTCCTGCAGGAACTTATGCAAGGACAGGACCCTGTATTTCTGGAATCTTCACCTGGGCCACGATTTaGTTGGGAAACTTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SCPAGTYARTGPCISGIFTWATI*LGNFRV
Trigger: AACTCTGAAGTTTCCCAACAAAATCGTGGCCCAGGT...GAAGATTCCAGAAATACAGGGTCCTGTCCTTGCATAAGTTCCTGCAGGACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCGACACAATAAACTTCTaGTCTGTTTCCACTGAGGAG +
Preference number: 5 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFDTINF*SVSTEE
Trigger: CTCCTCAGTGGAAACAGACAAGAAGTTTATTGTGTC...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCACTTACTATCAGGTTGGCACATACAAGGCTaGGCAGCAGCTTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: FIYPQLSLAIATHHLLSGWHIQG*AAASHS
Trigger: TGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCCA...ACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CAA 90 bp AGAAGTCCACTAATGGGAAGACCTGCTGAGGGCACTAGTACAGCAACGAAATTTGGGGTTACAGGAGGGTaGAGTTATTTGCTGCCTACA +
Preference number: 5 (lower is better)
Translates to: RSPLMGRPAEGTSTATKFGVTGG*SYLLPT
Trigger: TGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCC...AAATTTCGTTGCTGTACTAGTGCCCTCAGCAGGTCTTCCCATTAGTGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp GTTTTAAAGGATTCATCAGACCTCCACATGACACCGATACAGCAGGTCCATGGGGAGTCTTACCACATTTaGGCCCAATTAGGGCCACTT +
Preference number: 5 (lower is better)
Translates to: VLKDSSDLHMTPIQQVHGESYHI*AQLGPL
Trigger: AAGTGGCCCTAATTGGGCCAAAATGTGGTAAGACTC...CCCATGGACCTGCTGTATCGGTGTCATGTGGAGGTCTGATGAATCCTTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATACTTCCAGAAACCTACTaGCACTTCTCAGGTGGTACC +
Preference number: 5 (lower is better)
Translates to: LVGTLNERYVLLSIPPYILPETY*HFSGGT
Trigger: GGTACCACCTGAGAAGTGCAAGTAGGTTTCTGGAAG...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS TCA 90 bp ACTTGGGCTGCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTaGATATTGCTTCGAGATACAGAGCTCGCTCTTCATAGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: TWAAKSSNVITSRWF*ILLRDTELALHRSS
Trigger: AGAGCTTCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCAGCCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS GCA 90 bp CTGCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTGAATATTaGTTCGAGATACAGAGCTCGCTCTTCATAGAAGCTCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: LRNPRMSLLRGGSEY*FEIQSSLFIEALVE
Trigger: CTCTACCAGAGCTTCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CAA 90 bp GCTCCTGTCAGTGGGCCTGGCCTGCAATCCCCTATAAAGCAGAAAAGCAAATTCCTTGAACTACTTTTCTaGTTACAGCTATCTCACAGG +
Preference number: 5 (lower is better)
Translates to: APVSGPGLQSPIKQKSKFLELLF*LQLSHR
Trigger: CCTGTGAGATAGCTGTAACAAGAAAAGTAGTTCAAG...GAATTTGCTTTTCTGCTTTATAGGGGATTGCAGGCCAGGCCCACTGACAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCAGCAATTCCGCAACAGGAGTTTCTAGAGCCTGAAGATGAAACGTTCTCCCAGTTCCCTACATTTTCCTaGTGTCTGCTGCAAATCATC +
Preference number: 5 (lower is better)
Translates to: PAIPQQEFLEPEDETFSQFPTFS*CLLQII
Trigger: GATGATTTGCAGCAGACACAAGGAAAATGTAGGGAA...CTGGGAGAACGTTTCATCTTCAGGCTCTAGAAACTCCTGTTGCGGAATTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGTGGTACAGCCCAGAGTaGTGTCACTGTTGGTACTTT +
Preference number: 5 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKWYSPE*CHCWYF
Trigger: AAAGTACCAACAGTGACACAACTCTGGGCTGTACCA...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATGACAGCTCTGCCTCATaGGTACAGCCCAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHDSSAS*VQPRVV
Trigger: CACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTC...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GAGGGCACTAGTACAGCAACGAAATTTCCTGGAGATTCTGGGTTTAGTGGCTCGTGCTATCTGTTAAATTaGAAGCATCGGTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: EGTSTATKFPGDSGFSGSCYLLN*KHRWDS
Trigger: TGAGTCCCACCGATGCTTCAAATTTAACAGATAGCA...CGAGCCACTAAACCCAGAATCTCCAGGAAATTTCGTTGCTGTACTAGTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS-3UTR CAA 90 bp GCCAGGGCCCCTTGCTCAAATATTGAAATGAGACCTTTACGTGTTTTAATCCGTAGAGGGAGAAAAGACTaGGGCTGCGAAATCCTCGAA +
Preference number: 5 (lower is better)
Translates to: ARAPCSNIEMRPLRVLIRRGRKD*GCEILE
Trigger: TTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCT...ACGGATTAAAACACGTAAAGGTCTCATTTCAATATTTGAGCAAGGGGCCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS-3UTR CAA 90 bp AGGAACGACTGGCTCAGCTCTTTCTCATTTGTCCCAAGAGTGAGTCTGGCTCCTGGAGGGTTGAGTTATTaGCTGCCTACAATTGAATTT +
Preference number: 5 (lower is better)
Translates to: RNDWLSSFSFVPRVSLAPGGLSY*LPTIEF
Trigger: AAATTCAATTGTAGGCAGCAAATAACTCAACCCTCC...AGGAGCCAGACTCACTCTTGGGACAAATGAGAAAGAGCTGAGCCAGTCGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 90 bp CTATCTGTTAAATTTGAAGCATCGGTGGGACTCAGTTGTAACCAATaGCGGGCATCAGCATCAGCCACAACATCTGTGGGAGTATTCAGT +
Preference number: 5 (lower is better)
Translates to: LSVKFEASVGLSCNQ*RASASATTSVGVFS
Trigger: ACTGAATACTCCCACAGATGTTGTGGCTGATGCTGATGCCCGTCATTGGTTACAACTGAGTCCCACCGATGCTTCAAATTTAACAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp TGCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTGAATTATTaGTTCGAGATACAGAGCTCGCTCTTCATAGAAGCTCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: CEILECHYFAVVLNY*FEIQSSLFIEALVE
Trigger: CTCTACCAGAGCTTCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATAATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CACGTCTGCAAGGTGTTCCCACCACCTAGGAAGGAACCTAGATGTGGAGCATTACCACTTTCTGTACACTaGAACTACTTTTCTTGTTAC +
Preference number: 5 (lower is better)
Translates to: HVCKVFPPPRKEPRCGALPLSVH*NYFSCY
Trigger: GTAACAAGAAAAGTAGTTCAAGTGTACAGAAAGTGG...TAATGCTCCACATCTAGGTTCCTTCCTAGGTGGTGGGAACACCTTGCAGACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGACAGCCTTTGCCTCGTaGCTTCTTTTCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKTAFAS*LLFLLF
Trigger: GAACAAAAGGAAAAGAAGCAACGAGGCAAAGGCTGT...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp AAAACAACTCCAGTCCACGTGATCACGAGAAACGTGGCTGTCAGATTCCCTGCTCACTTCAGTTGCTTTTaGGCGAACAATATTTCTTGC +
Preference number: 5 (lower is better)
Translates to: KTTPVHVITRNVAVRFPAHFSCF*ANNISC
Trigger: GCAAGAAATATTGTTCGCCAAAAAGCAACTGAAGTG...AGCAGGGAATCTGACAGCCACGTTTCTCGTGATCACGTGGACTGGAGTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTGGTTATCCAGGCTTATaGCTAGATTATCCCGTATCT +
Preference number: 5 (lower is better)
Translates to: WLLGTADFVAEATQAKFLGYPGL*LDYPVS
Trigger: AGATACGGGATAATCTAGCAATAAGCCTGGATAACC...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAGATCCCCCTCCTCAACTaGAGAAGAGTCTTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: TLPFSRYKGSTVTFTTSQIPLLN*RRVFLR
Trigger: CCTCAGAAAGACTCTTCTCAAGTTGAGGAGGGGGAT...CTGTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp AGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGACATCACAAGCTTCCTTCCACTTaGGGGCACCCTCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: RRCPSVDIKVAQLHLRHHKLPST*GHPHSL
Trigger: AAGAGAATGAGGGTGCCCCAAAGTGGAAGGAAGCTT...GTGATGTCGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATCCCACCTTATATAAATGAGCGATACGTTTaGCTCAGCATCCCACCTTAT +
Preference number: 5 (lower is better)
Translates to: LVGTLNERYVLLSIPPYINERYV*LSIPPY
Trigger: ATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATT...TATATAAGGTGGGATGCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS TCA 90 bp TGCCTGGTGAAATACTTCATTCACGAAGTTGACATAACCTCGTGTTaGCAAGAGAATCCGCTGTACCATTTCATACACCATTCGGTGCTC +
Preference number: 5 (lower is better)
Translates to: CLVKYFIHEVDITSC*QENPLYHFIHHSVL
Trigger: GAGCACCGAATGGTGTATGAAATGGTACAGCGGATTCTCTTGTCAACACGAGGTTATGTCAACTTCGTGAATGAAGTATTTCACCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCCCACTTTCTGTACACTaGAACTACTTTTCTTGTTAC +
Preference number: 5 (lower is better)
Translates to: PQTLLLRQPRLNFFTSVCPLSVH*NYFSCY
Trigger: GTAACAAGAAAAGTAGTTCAAGTGTACAGAAAGTGG...GCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTTCTAGAACACAGCCTTaGCCTCGTTGCTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGSRTQP*PRCFFS
Trigger: GGAAAAGAAGCAACGAGGCAAAGGCTGTGTTCTAGA...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GCTCTTGCTTGTAAGGCTGAGGGTCTGATCAATCAACCTATGTCACCAAGTTTGAGAGTTGTGTCACTGTaGGTACTTTCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: ALACKAEGLINQPMSPSLRVVSL*VLSLFC
Trigger: ACAGAAGAGTGAAAGTACCAACAGTGACACAACTCT...CAAACTTGGTGACATAGGTTGATTGATCAGACCCTCAGCCTTACAAGCAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GATTCCTCAATTAGACAATTGTTTTGCCAGCCCCTTTGTGAATCATGCTTGGGTACTCTGGCATGGATCTaGGGTGACTGGATGTTATTC +
Preference number: 5 (lower is better)
Translates to: DSSIRQLFCQPLCESCLGTLAWI*GDWMLF
Trigger: GAATAACATCCAGTCACCCAAGATCCATGCCAGAGT...ACCCAAGCATGATTCACAAAGGGGCTGGCAAAACAATTGTCTAATTGAGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCGGTTATCCAGGCTTATaGCTAGATTATCCCGTATCT +
Preference number: 5 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTGYPGL*LDYPVS
Trigger: AGATACGGGATAATCTAGCAATAAGCCTGGATAACC...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGGACACAATAAACTTCTaGTCTGTTTCCACTGAGGAG +
Preference number: 5 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTDTINF*SVSTEE
Trigger: CTCCTCAGTGGAAACAGACAAGAAGTTTATTGTGTC...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TGGCTCTTAGGAACCGCAGACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTAAAGGCATTCAGGACTaGTATGGCCAATGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: WLLGTADFVAEATQAKFLKGIQD*YGQCFQ
Trigger: TTGAAAACATTGGCCATACAAGTCCTGAATGCCTTT...AAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTCTGCGGTTCCTAAGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GACTTTGTTGCTGAGGCAACCCAGGCTAAATTTCTTCACTTCTGTCTGCTGAAGATCCTCTTGAGCATTTaGGCGCAAAATGACCTCAAT +
Preference number: 5 (lower is better)
Translates to: DFVAEATQAKFLHFCLLKILLSI*AQNDLN
Trigger: ATTGAGGTCATTTTGCGCCAAAATGCTCAAGAGGAT...CTTCAGCAGACAGAAGTGAAGAAATTTAGCCTGGGTTGCCTCAGCAACAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGACAGCCCTGCTGGCGTaGATGCACGTGGCACATACA +
Preference number: 5 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMTALLA*MHVAHT
Trigger: TGTATGTGCCACGTGCATCAACGCCAGCAGGGCTGT...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CAA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGTCTAATAAGCCTTCCTaGGAGCCAAATGGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTSNKPS*EPNGQK
Trigger: TTTTTGCCCATTTGGCTCCAAGGAAGGCTTATTAGA...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CATTTGCTTTGGTTTCTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCTTAGGGTCATTTCATTaGCTTTGGTTTCTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: HLLWFLVGTLNERYVLLSLGSFH*LWFLVG
Trigger: GCCTACCAGAAACCAAAGCAAATGAAATGACCCTAA...GCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAGAAACCAAAGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS CCA 90 bp TCTTTGCTAGTTTGTACCAGAGTTCATAGAGATAGCAGAAAACTCTaGCATGGATCTTGGGTGACTGGATGTTATTCACATCTCCGAGGA +
Preference number: 5 (lower is better)
Translates to: SLLVCTRVHRDSRKL*HGSWVTGCYSHLRG
Trigger: TCCTCGGAGATGTGAATAACATCCAGTCACCCAAGATCCATGCCAGAGTTTTCTGCTATCTCTATGAACTCTGGTACAAACTAGCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp AACATTCTGAGTGGTGGGATCAAAACTGGAGGAGATGGAGAAGACTaGTTATCCAGGCTTATTGCTAGATTATCCCGTATCTTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: NILSGGIKTGGDGED*LSRLIARLSRIFAS
Trigger: ACTAGCAAAGATACGGGATAATCTAGCAATAAGCCTGGATAACCAGTCTTCTCCATCTCCTCCAGTTTTGATCCCACCACTCAGAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGTATCCAGAGGTAGGTTaGTCATCTCAACTCCATAAA +
Preference number: 5 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTYPEVG*SSQLHK
Trigger: TTTATGGAGTTGAGATGACAAACCTACCTCTGGATA...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TCAGGGGTTACAGGAGGGTTGAGTTATTTGCTGCCTACAATTGAATTTCCCACCCACTTCAGTTGCTTTTaGGCGAACAATATTTCTTGC +
Preference number: 5 (lower is better)
Translates to: SGVTGGLSYLLPTIEFPTHFSCF*ANNISC
Trigger: GCAAGAAATATTGTTCGCCAAAAAGCAACTGAAGTG...GGTGGGAAATTCAATTGTAGGCAGCAAATAACTCAACCCTCCTGTAACCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CGGATGCAGACGCTGCCCTTCAGTAGATATAAAGGTAGCACAGTTACATTTACGGATATACTCATCCTCTaGAGCATTTTGGCGCAAAAT +
Preference number: 5 (lower is better)
Translates to: RMQTLPFSRYKGSTVTFTDILIL*SILAQN
Trigger: ATTTTGCGCCAAAATGCTCAAGAGGATGAGTATATC...CGTAAATGTAACTGTGCTACCTTTATATCTACTGAAGGGCAGCGTCTGCATCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp CATTTGCTTTGGTTTCTGGTAGGCACTCTGAATGAGCGATACGTTTTGCTCAGCATTACGTCTACAGTGTaGTGGAAATCACTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: HLLWFLVGTLNERYVLLSITSTV*WKSLQR
Trigger: TCTTTGCAGTGATTTCCACAACACTGTAGACGTAAT...GCTGAGCAAAACGTATCGCTCATTCAGAGTGCCTACCAGAAACCAAAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CAA 90 bp TTCATCTACCCCCAACTCTCACTTGCTATAGCAACACATCACTTACTATCAGGTATGCTGAAGGCCAAATaGACACCAGCCACAAGATTA +
Preference number: 5 (lower is better)
Translates to: FIYPQLSLAIATHHLLSGMLKAK*TPATRL
Trigger: TAATCTTGTGGCTGGTGTCAATTTGGCCTTCAGCAT...ACCTGATAGTAAGTGATGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS TCA 90 bp TTCTCTCTTCACATGTCCTTTATTCTCTTGAATAGGCTGAGGCTCTaGAGAACTCGAATTCTGTGTGTTTTCTGCCTTTTGACCCTGAGA +
Preference number: 5 (lower is better)
Translates to: FSLHMSFILLNRLRL*RTRILCVFCLLTLR
Trigger: TCTCAGGGTCAAAAGGCAGAAAACACACAGAATTCGAGTTCTTCAGAGCCTCAGCCTATTCAAGAGAATAAAGGACATGTGAAGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 90 bp TTGGTACTTTCACTCTTCTGTCTTTCCCTACATTTTCCTTGTGTCTaGTGCAAATCATCTTTCAAATCCAATTCAGCAGGGCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: LVLSLFCLSLHFPCV*CKSSFKSNSAGLLL
Trigger: AAGCAGCAGCCCTGCTGAATTGGATTTGAAAGATGATTTGCAGCAGACACAAGGAAAATGTAGGGAAAGACAGAAGAGTGAAAGTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp TTCACATGGGATAGTTTTCATCTACCCCCAACTCTCACTTGCTATAGCAACACAAAACTGCCAGGAATCTaGATTCTGGGATGGTTAGTA +
Preference number: 5 (lower is better)
Translates to: FTWDSFHLPPTLTCYSNTKLPGI*ILGWLV
Trigger: TACTAACCATCCCAGAATCAAGATTCCTGGCAGTTT...TGTGTTGCTATAGCAAGTGAGAGTTGGGGGTAGATGAAAACTATCCCATGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CAA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGCTTGGTCCAACATACTaGACTGATGCGTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMLGPTY*TDACPA
Trigger: AGCTGGGCACGCATCAGTCAAGTATGTTGGACCAAG...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS TCA 90 bp AGGAAGGCAACAAAAATGCCTGGTGAAATACTTCATTCACGAAGTTaGCATAACCTCGTGTTGACAAGAGAATCCGCTGTACCATTTCAT +
Preference number: 5 (lower is better)
Translates to: RKATKMPGEILHSRS*HNLVLTRESAVPFH
Trigger: ATGAAATGGTACAGCGGATTCTCTTGTCAACACGAGGTTATGTCAACTTCGTGAATGAAGTATTTCACCAGGCATTTTTGTTGCCTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp ACAAGCATCAACTTGTTCTTTCAAGAGCACAGGAACTTCAGCACATaGTTCCAACAAAAAGATGTTTGCAGAGTTCGTCAAAAATACCTG +
Preference number: 5 (lower is better)
Translates to: TSINLFFQEHRNFST*FQQKDVCRVRQKYL
Trigger: CAGGTATTTTTGACGAACTCTGCAAACATCTTTTTGTTGGAACCATGTGCTGAAGTTCCTGTGCTCTTGAAAGAACAAGTTGATGCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp ATTAAATCCCTCGCTTGGAATCGGCTACCAAAAGCTTTGTGTGACAAGAAACATTTTACAAGCATCAACTaGTTCTTTCAAGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: IKSLAWNRLPKALCDKKHFTSIN*FFQEHR
Trigger: CCTGTGCTCTTGAAAGAACAAGTTGATGCTTGTAAA...ATGTTTCTTGTCACACAAAGCTTTTGGTAGCCGATTCCAAGCGAGGGATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS-3UTR CAA 90 bp GAAACATTCACTTCATGTGTATGTCATATGGACAGACTGAGTGCAACTAAAACGTGCTATCTGTTAAATTaGAAGCATCGGTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: ETFTSCVCHMDRLSATKTCYLLN*KHRWDS
Trigger: TGAGTCCCACCGATGCTTCAAATTTAACAGATAGCA...CGTTTTAGTTGCACTCAGTCTGTCCATATGACATACACATGAAGTGAATGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 90 bp ATACTTACCTCTTATGAAAAACTGCCAGGAATCTTGATTCTGGGATaGTTAGTAAGTTACACATTTAAAGCAAAAAGATACAAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ILTSYEKLPGILILG*LVSYTFKAKRYKLW
Trigger: CCAGAGCTTGTATCTTTTTGCTTTAAATGTGTAACTTACTAACCATCCCAGAATCAAGATTCCTGGCAGTTTTTCATAAGAGGTAAGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS-3UTR CAA 90 bp ACATCACTTACTATCAGGTTGGGAGAAGTATATATAGAGGTCAAACACAATATGTCACTTACTATCAGGTaGGGAGAAGTATATATAGAG +
Preference number: 5 (lower is better)
Translates to: TSLTIRLGEVYIEVKHNMSLTIR*GEVYIE
Trigger: CTCTATATATACTTCTCCCAACCTGATAGTAAGTGA...CATATTGTGTTTGACCTCTATATATACTTCTCCCAACCTGATAGTAAGTGATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427175.2
CDS GCA 72 bp GGGATGTCGGAGGTGCTGCTGCTCCGAAGGACCTGCTaGTGCTGTCCCACTGTGAGATGGCCAGATCCGGCT +
Preference number: 6 (lower is better)
Translates to: GMSEVLLLRRTC*CCPTVRWPDPA
Trigger: AGCCGGATCTGGCCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 72 bp TCGGGGATGTCGGAGGTGCTGCTGCTCCGAAGGACCTaGTGCTGCTGTCCCACTGTGAGATGGCCAGATCCG +
Preference number: 6 (lower is better)
Translates to: SGMSEVLLLRRT*CCCPTVRWPDP
Trigger: CGGATCTGGCCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 72 bp AATCTGAGCACAGCGGCTCGGGGATGTCGGAGGTGCTaGTGCTCCGAAGGACCTGCTGCTGCTGTCCCACTG +
Preference number: 6 (lower is better)
Translates to: NLSTAARGCRRC*CSEGPAAAVPL
Trigger: CAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCGAGCCGCTGTGCTCAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 72 bp ATGTCGGAGGTGCTGCTGCTCCGAAGGACCTGCTGCTaGTGTCCCACTGTGAGATGGCCAGATCCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: MSEVLLLRRTCC*CPTVRWPDPAA
Trigger: TGCAGCCGGATCTGGCCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 72 bp AAGAATCTGAGCACAGCGGCTCGGGGATGTCGGAGGTaGTGCTGCTCCGAAGGACCTGCTGCTGCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: KNLSTAARGCRR*CCSEGPAAAVP
Trigger: TGGGACAGCAGCAGCAGGTCCTTCGGAGCAGCAGCACCTCCGACATCCCCGAGCCGCTGTGCTCAGATTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CCA 72 bp GGGCTCTGGCCGAATGCTGCTCCTCTAGGACTGCTGTaGACACGGGGTGGAGAAGGACACTCACGGGCAATG +
Preference number: 6 (lower is better)
Translates to: GLWPNAAPLGLL*TRGGEGHSRAM
Trigger: CATTGCCCGTGAGTGTCCTTCTCCACCCCGTGTCCACAGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp GCATCGGTTCGGTCACATCTGGGTGGCTCCGCCAGCTaGGAGAAAAGGACCTCCCCACGGTGGTTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: ASVRSHLGGSAS*EKRTSPRWFLS
Trigger: AGAAAGGAACCACCGTGGGGAGGTCCTTTTCTCTCAGCTGGCGGAGCCACCCAGATGTGACCGAACCGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 72 bp TCATTTGCATCCACATTATCCAGCAGCGCCCGCAGGTaGTTCAGGCGGGTCAGCACGTCCTTCTTCGGGTCC +
Preference number: 6 (lower is better)
Translates to: SFASTLSSSARR*FRRVSTSFFGS
Trigger: GGACCCGAAGAAGGACGTGCTGACCCGCCTGAAGCACCTGCGGGCGCTGCTGGATAATGTGGATGCAAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS GCA 72 bp TCCGACAAGGTGCTGCTGTTAGAATGGCTTTTGTCCTaGTCCGTGGGCCCACCACCATCCAGCTCAGGCGCT +
Preference number: 6 (lower is better)
Translates to: SDKVLLLEWLLS*SVGPPPSSSGA
Trigger: AGCGCCTGAGCTGGATGGTGGTGGGCCCACGGAGCAGGACAAAAGCCATTCTAACAGCAGCACCTTGTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp GCACTCCTAAATCGCATCGGTTCGGTCACATCTGGGTaGCTCCGCCAGCTGAGAGAAAAGGACCTCCCCACG +
Preference number: 6 (lower is better)
Translates to: ALLNRIGSVTSG*LRQLREKDLPT
Trigger: CGTGGGGAGGTCCTTTTCTCTCAGCTGGCGGAGCCACCCAGATGTGACCGAACCGATGCGATTTAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CCA 72 bp GGTGGCACTCCTAAATCGCATCGGTTCGGTCACATCTaGGTGGCTCCGCCAGCTGAGAGAAAAGGACCTCCC +
Preference number: 6 (lower is better)
Translates to: GGTPKSHRFGHI*VAPPAERKGPP
Trigger: GGGAGGTCCTTTTCTCTCAGCTGGCGGAGCCACCCAGATGTGACCGAACCGATGCGATTTAGGAGTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CCA 72 bp GAATGCTGCTCCTCTAGGACTGCTGTGGACACGGGGTaGAGAAGGACACTCACGGGCAATGCCATGCACCAG +
Preference number: 6 (lower is better)
Translates to: ECCSSRTAVDTG*RRTLTGNAMHQ
Trigger: CTGGTGCATGGCATTGCCCGTGAGTGTCCTTCTCCACCCCGTGTCCACAGCAGTCCTAGAGGAGCAGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp TTGCTGAGTCTTCGGTCCGACAAGGTGCTGCTGTTAGAATGGCTTTaGTCCTGCTCCGTGGGCCCACCACCATCCAGCTCAGGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: LLSLRSDKVLLLEWL*SCSVGPPPSSSGAL
Trigger: GAGAGCGCCTGAGCTGGATGGTGGTGGGCCCACGGAGCAGGACAAAAGCCATTCTAACAGCAGCACCTTGTCGGACCGAAGACTCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp GGCCCCCGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTaGGGCTGCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: GPRSAEGVAGRGRKD*GCEILECHYFAVVL
Trigger: CAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430436.5
CDS CCA 72 bp CTCCGAAGGACCTGCTGCTGCTGTCCCACTGTGAGATaGCCAGATCCGGCTGCAGGTGCATTTTCTGACTGT +
Preference number: 6 (lower is better)
Translates to: LRRTCCCCPTVR*PDPAAGAFSDC
Trigger: ACAGTCAGAAAATGCACCTGCAGCCGGATCTGGCCATCTCACAGTGGGACAGCAGCAGCAGGTCCTTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CCA 72 bp GTTCTGGGTCTTCCTCACAGGTCTGCCATGGGCCCATaGACAGCTCTGCCTCATTGGTACAGCCCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: VLGLPHRSAMGP*TALPHWYSPEL
Trigger: CAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp ATTGATGAGTGTCTCCAGTGTGCAAGGGCCCCTGGATaGCATGACTGCTGGGAAACCAGGCACCAGGCAAGC +
Preference number: 6 (lower is better)
Translates to: IDECLQCARAPG*HDCWETRHQAS
Trigger: GCTTGCCTGGTGCCTGGTTTCCCAGCAGTCATGTCATCCAGGGGCCCTTGCACACTGGAGACACTCATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000424981.1
CDS GCA 72 bp ACACGGGGTGGAGAAGGACACTCACGGGCAATGCCATaGACCAGTCCAAGAGGCAGAGTAGCAAGGACACAA +
Preference number: 6 (lower is better)
Translates to: TRGGEGHSRAMP*TSPRGRVARTQ
Trigger: TTGTGTCCTTGCTACTCTGCCTCTTGGACTGGTGCATGGCATTGCCCGTGAGTGTCCTTCTCCACCCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp AAGGACAGCTCGGAGCCTTCCACATGGGCATTGTCATaGTTCTCGCTGACAAGGCTGTGCAGTATGGCAGGG +
Preference number: 6 (lower is better)
Translates to: KDSSEPSTWALS*FSLTRLCSMAG
Trigger: CCCTGCCATACTGCACAGCCTTGTCAGCGAGAACCATGACAATGCCCATGTGGAAGGCTCCGAGCTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp TTCCTCACAGGTCTGCCATGGGCCCATGGACAGCTCTaGCTCATTGGTACAGCCCAGAGTTGTGTCACTGTT +
Preference number: 6 (lower is better)
Translates to: FLTGLPWAHGQL*LIGTAQSCVTV
Trigger: AACAGTGACACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp GTGGGAGTATTCAGTTCTGGGTCTTCCTCACAGGTCTaGCATGGGCCCATGGACAGCTCTGCCTCATTGGTA +
Preference number: 6 (lower is better)
Translates to: VGVFSSGSSSQV*HGPMDSSASLV
Trigger: TACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp AGTATTCAGTTCTGGGTCTTCCTCACAGGTCTGCCATaGGCCCATGGACAGCTCTGCCTCATTGGTACAGCC +
Preference number: 6 (lower is better)
Translates to: SIQFWVFLTGLP*AHGQLCLIGTA
Trigger: GGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp CTGAACACCTCAAAGGACAGCTCGGAGCCTTCCACATaGGCATTGTCATGGTTCTCGCTGACAAGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: LNTSKDSSEPST*ALSWFSLTRLC
Trigger: GCACAGCCTTGTCAGCGAGAACCATGACAATGCCCATGTGGAAGGCTCCGAGCTGTCCTTTGAGGTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp CCTGCTGGCGTTGATGCACGTGGCACATACAAGGCTTaGCAGCAGCTTCCCACTCACTATGGCTCCATCAAA +
Preference number: 6 (lower is better)
Translates to: PAGVDARGTYKA*QQLPTHYGSIK
Trigger: TTTGATGGAGCCATAGTGAGTGGGAAGCTGCTGCCAAGCCTTGTATGTGCCACGTGCATCAACGCCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000202677.12
ENST00000427175.2
ENST00000430436.5
ENST00000620717.4
CDS CAA 72 bp CAGGTCTGCCATGGGCCCATGGACAGCTCTGCCTCATaGGTACAGCCCAGAGTTGTGTCACTGTTGGTACTT +
Preference number: 6 (lower is better)
Translates to: QVCHGPMDSSAS*VQPRVVSLLVL
Trigger: AAGTACCAACAGTGACACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGCAGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp AGGTATTTGGAAAGCAGACCAGAGAGCCGAGGACAGTaGCAGCCTCTGAACGAGGCGCCGTCAAAATGTCTG +
Preference number: 6 (lower is better)
Translates to: RYLESRPESRGQ*QPLNEAPSKCL
Trigger: CAGACATTTTGACGGCGCCTCGTTCAGAGGCTGTCACTGTCCTCGGCTCTCTGGTCTGCTTTCCAAATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp AGCATCAGCCACAACATCTGTGGGAGTATTCAGTTCTaGGTCTTCCTCACAGGTCTGCCATGGGCCCATGGA +
Preference number: 6 (lower is better)
Translates to: SISHNICGSIQF*VFLTGLPWAHG
Trigger: TCCATGGGCCCATGGCAGACCTGTGAGGAAGACCCAGAACTGAATACTCCCACAGATGTTGTGGCTGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp GCAAAACCCTGTAGATATAATCCAGCAAGGGGGCTCTaGCCGAATGCTGCTCCTCTAGGACTGCTGTGGACA +
Preference number: 6 (lower is better)
Translates to: AKPCRYNPARGL*PNAAPLGLLWT
Trigger: TGTCCACAGCAGTCCTAGAGGAGCAGCATTCGGCCAGAGCCCCCTTGCTGGATTATATCTACAGGGTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp TCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTaGGGCTGCGAAATCCTCGAATGTCATTACTTCGCG +
Preference number: 6 (lower is better)
Translates to: SAEGVAGRGRKD*GCEILECHYFA
Trigger: CGCGAAGTAATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000620717.4
CDS TCA 72 bp CTGAGAGAAAAGGACCTCCCCACGGTGGTTCCTTTCTaGGGATCTAGAACACAGCCTTTGCCTCGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: LREKDLPTVVPF*GSRTQPLPRCF
Trigger: GAAGCAACGAGGCAAAGGCTGTGTTCTAGATCCTCAGAAAGGAACCACCGTGGGGAGGTCCTTTTCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS GCA 72 bp TTGGCGAACAATATTTCTTGCCTTTTCCACTCCCGGTaGTCCAGACGTGGTGGCACTCCTAAATCGCATCGG +
Preference number: 6 (lower is better)
Translates to: LANNISCLFHSR*SRRGGTPKSHR
Trigger: CCGATGCGATTTAGGAGTGCCACCACGTCTGGAGCACCGGGAGTGGAAAAGGCAAGAAATATTGTTCGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CCA 72 bp CCAGGAAATCTGAGTTTGGCAGAACGTCCTGGCGTCTaGTCATCATGGCACAGATCAGCCTGTAGGCTTGTA +
Preference number: 6 (lower is better)
Translates to: PGNLSLAERPGV*SSWHRSACRLV
Trigger: TACAAGCCTACAGGCTGATCTGTGCCATGATGACCAGACGCCAGGACGTTCTGCCAAACTCAGATTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp GGGACGCTTTTAGTGGCAGGCAAAGCCTCAGAAAGGTaGACACAGTTGCTGATAGACTGGCTTCGCTTAGCA +
Preference number: 6 (lower is better)
Translates to: GTLLVAGKASER*TQLLIDWLRLA
Trigger: TGCTAAGCGAAGCCAGTCTATCAGCAACTGTGTCCACCTTTCTGAGGCTTTGCCTGCCACTAAAAGCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495793.2
CDS CAA 90 bp TTAATCCGTTCCGCTGAGGGAGTAGCTGGGAGAGGGAGAAAAGACTaGGGCTGCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: LIRSAEGVAGRGRKD*GCEILECHYFAVVL
Trigger: CAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCAGCCCAAGTCTTTTCTCCCTCTCCCAGCTACTCCCTCAGCGGAACGGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000620717.4
CDS CAA 90 bp GCCATGGGCCCATGGACAGCTCTGCCTCATTGGTACAGCCCAGAGTaGTGTCACTGTTGGTACTTTCACTCTTCTGTCTTTCCCTACATT +
Preference number: 6 (lower is better)
Translates to: AMGPWTALPHWYSPE*CHCWYFHSSVFPYI
Trigger: AATGTAGGGAAAGACAGAAGAGTGAAAGTACCAACAGTGACACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGGGCCCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp ATCCCAGGTGCATCACAAGGTAAAAATGCACCAGGAAATCTGAGTTaGGCAGAACGTCCTGGCGTCTGGTCATCATGGCACAGATCAGCC +
Preference number: 6 (lower is better)
Translates to: IPGASQGKNAPGNLS*AERPGVWSSWHRSA
Trigger: GGCTGATCTGTGCCATGATGACCAGACGCCAGGACGTTCTGCCAAACTCAGATTTCCTGGTGCATTTTTACCTTGTGATGCACCTGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp ATTTGCCAGTGGCAGGAAGGGGTCATAATCCGTGGATaGCAAGTCAGCCAGGGTCAGTATGTAGTGACTCTG +
Preference number: 6 (lower is better)
Translates to: ICQWQEGVIIRG*QVSQGQYVVTL
Trigger: CAGAGTCACTACATACTGACCCTGGCTGACTTGTCATCCACGGATTATGACCCCTTCCTGCCACTGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp CATTCGAGTGGAAACATGGAAAATCACTTCCACAGTTaGGGTAGCATAGTAAGGGGCCGTCTGCCCGGTGCT +
Preference number: 6 (lower is better)
Translates to: HSSGNMENHFHS*GSIVRGRLPGA
Trigger: AGCACCGGGCAGACGGCCCCTTACTATGCTACCTCAACTGTGGAAGTGATTTTCCATGTTTCCACTCGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000202677.12
ENST00000427175.2
ENST00000430436.5
ENST00000620717.4
CDS GCA 72 bp CTCCACTTCAGTTGCTTTTTGGCGAACAATATTTCTTaGCTTTTCCACTCCCGGTGCTCCAGACGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: LHFSCFLANNIS*LFHSRCSRRGG
Trigger: GCCACCACGTCTGGAGCACCGGGAGTGGAAAAGGCAAGAAATATTGTTCGCCAAAAAGCAACTGAAGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp TCGCTTAGCAGTTGCTTTTTGGCGAACAATATTTCTTaGCTTTTCCACTCCCGGTGCTCCAGACGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: SLSSCFLANNIS*LFHSRCSRRGG
Trigger: GCCACCACGTCTGGAGCACCGGGAGTGGAAAAGGCAAGAAATATTGTTCGCCAAAAAGCAACTGCTAAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495793.2
CDS CCA 72 bp ACCAATGACGGGCATCAGCATCAGCCACAACATCTGTaGGAGTATTCAGTTCTGGGTCTTCCTCACAGGTCT +
Preference number: 6 (lower is better)
Translates to: TNDGHQHQPQHL*EYSVLGLPHRS
Trigger: AGACCTGTGAGGAAGACCCAGAACTGAATACTCCCACAGATGTTGTGGCTGATGCTGATGCCCGTCATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp ATTCGGTGCTCTTCTTCAATGCTACAGAGGCTGGAGTaGCTGAGTCTTCGGTCCGACAAGGTGCTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: IRCSSSMLQRLE*LSLRSDKVLLL
Trigger: TAACAGCAGCACCTTGTCGGACCGAAGACTCAGCAACTCCAGCCTCTGTAGCATTGAAGAAGAGCACCGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp GGGTCAGTATGTAGTGACTCTGTTGGGTGTACGTGCTaGAGCCACACACACAGCAGTGCAAAACCCTGTAGA +
Preference number: 6 (lower is better)
Translates to: GSVCSDSVGCTC*SHTHSSAKPCR
Trigger: TCTACAGGGTTTTGCACTGCTGTGTGTGTGGCTCAAGCACGTACACCCAACAGAGTCACTACATACTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp TCATACACCATTCGGTGCTCTTCTTCAATGCTACAGAGGCTGGAGTaGCTGAGTCTTCGGTCCGACAAGGTGCTGCTGTTAGAATGGCTT +
Preference number: 6 (lower is better)
Translates to: SYTIRCSSSMLQRLE*LSLRSDKVLLLEWL
Trigger: AAGCCATTCTAACAGCAGCACCTTGTCGGACCGAAGACTCAGCAACTCCAGCCTCTGTAGCATTGAAGAAGAGCACCGAATGGTGTATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp GGTCAGTATGTAGTGACTCTGTTGGGTGTACGTGCTTaGGCCACACACACAGCAGTGCAAAACCCTGTAGAT +
Preference number: 6 (lower is better)
Translates to: GQYVVTLLGVRA*ATHTAVQNPVD
Trigger: ATCTACAGGGTTTTGCACTGCTGTGTGTGTGGCTCAAGCACGTACACCCAACAGAGTCACTACATACTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp GCATCACAAGGTAAAAATGCACCAGGAAATCTGAGTTaGGCAGAACGTCCTGGCGTCTGGTCATCATGGCAC +
Preference number: 6 (lower is better)
Translates to: ASQGKNAPGNLS*AERPGVWSSWH
Trigger: GTGCCATGATGACCAGACGCCAGGACGTTCTGCCAAACTCAGATTTCCTGGTGCATTTTTACCTTGTGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp AGTCAGCCAGGGTCAGTATGTAGTGACTCTGTTGGGTGTACGTGCTaGAGCCACACACACAGCAGTGCAAAACCCTGTAGATATAATCCA +
Preference number: 6 (lower is better)
Translates to: SQPGSVCSDSVGCTC*SHTHSSAKPCRYNP
Trigger: TGGATTATATCTACAGGGTTTTGCACTGCTGTGTGTGTGGCTCAAGCACGTACACCCAACAGAGTCACTACATACTGACCCTGGCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp AAATTTGAAGCATCGGTGGGACTCAGTTGTAACCAATaGCGGGCATCAGCATCAGCCACAACATCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: KFEASVGLSCNQ*RASASATTSVG
Trigger: TCCCACAGATGTTGTGGCTGATGCTGATGCCCGTCATTGGTTACAACTGAGTCCCACCGATGCTTCAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp GTTCTTGCAAGCACTGCTGTCAAGGAGTCCATAATGTaGGCCCACTCGTTTATAAGTTCCTCCCATTCCGTG +
Preference number: 6 (lower is better)
Translates to: VLASTAVKESIM*AHSFISSSHSV
Trigger: CACGGAATGGGAGGAACTTATAAACGAGTGGGCCAACATTATGGACTCCTTGACAGCAGTGCTTGCAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CAA 72 bp CCATGGACAGCTCTGCCTCATTGGTACAGCCCAGAGTaGTGTCACTGTTGGTACTTTCACTCTTCTGTCTTT +
Preference number: 6 (lower is better)
Translates to: PWTALPHWYSPE*CHCWYFHSSVF
Trigger: AAAGACAGAAGAGTGAAAGTACCAACAGTGACACAACTCTGGGCTGTACCAATGAGGCAGAGCTGTCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp AAGGAGTATGTGCGTCCCCAACTGGAAGATCGTTTATaGCCAGAACTTTCAGATGAGGCCTCCTTGCTATCA +
Preference number: 6 (lower is better)
Translates to: KEYVRPQLEDRL*PELSDEASLLS
Trigger: TGATAGCAAGGAGGCCTCATCTGAAAGTTCTGGTCATAAACGATCTTCCAGTTGGGGACGCACATACTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp AGAGTTACTCCTATCACATTGATGGCCTCTTTCACCTaGGGGTGGCTTGTACACTGTGCAAGCTCTTCACAT +
Preference number: 6 (lower is better)
Translates to: RVTPITLMASFT*GWLVHCASSSH
Trigger: ATGTGAAGAGCTTGCACAGTGTACAAGCCACCCTCAGGTGAAAGAGGCCATCAATGTGATAGGAGTAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp AAGAGAATCCGCTGTACCATTTCATACACCATTCGGTaGTCTTCTTCAATGCTACAGAGGCTGGAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: KRIRCTISYTIR*SSSMLQRLELL
Trigger: CAGCAACTCCAGCCTCTGTAGCATTGAAGAAGAGCACCGAATGGTGTATGAAATGGTACAGCGGATTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp TGTCATCTCAACTCCATAAACGGTTCTTGCAAGCACTaGTGTCAAGGAGTCCATAATGTTGGCCCACTCGTT +
Preference number: 6 (lower is better)
Translates to: CHLNSINGSCKH*CQGVHNVGPLV
Trigger: AACGAGTGGGCCAACATTATGGACTCCTTGACAGCAGTGCTTGCAAGAACCGTTTATGGAGTTGAGATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2
CDS CAA 72 bp CAGAACCTGCTCTTCTGCACAGTTTGTCTGAAGTGCTaGAAGCCACAGAAGAAACAGCCTGATTCCTTCACA +
Preference number: 6 (lower is better)
Translates to: QNLLFCTVCLKC*KPQKKQPDSFT
Trigger: TGTGAAGGAATCAGGCTGTTTCTTCTGTGGCTTCAAGCACTTCAGACAAACTGTGCAGAAGAGCAGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS CAA 90 bp CTGCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTGAATTATaGCTTCGAGATACAGAGCTCGCTCTTCATAGAAGCTCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: LRNPRMSLLRGGSEL*LRDTELALHRSSGR
Trigger: TCTACCAGAGCTTCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATAATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp GCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTaGATTATTGCTTCGAGATACAGAGCTCGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: AKSSNVITSRWF*IIASRYRARSS
Trigger: TGAAGAGCGAGCTCTGTATCTCGAAGCAATAATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp GCGAAATCCTCGAATGTCATTACTTCGCGGTGGTTCTaGATATTGCTTCGAGATACAGAGCTCGCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: AKSSNVITSRWF*ILLRDTELALH
Trigger: ATGAAGAGCGAGCTCTGTATCTCGAAGCAATATTCAGAACCACCGCGAAGTAATGACATTCGAGGATTTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS GCA 72 bp CCTCGAATGTCATTACTTCGCGGTGGTTCTGAATATTaGTTCGAGATACAGAGCTCGCTCTTCATAGAAGCT +
Preference number: 6 (lower is better)
Translates to: PRMSLLRGGSEY*FEIQSSLFIEA
Trigger: AGCTTCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATATTCAGAACCACCGCGAAGTAATGACATTCGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620717.4
CDS CCA 72 bp AGTGGTGGGATCAAAACTGGAGGAGATGGAGAAGACTaGTTATCCAGGCTTATTGCTAGATTATCCCGTATC +
Preference number: 6 (lower is better)
Translates to: SGGIKTGGDGED*LSRLIARLSRI
Trigger: GATACGGGATAATCTAGCAATAAGCCTGGATAACCAGTCTTCTCCATCTCCTCCAGTTTTGATCCCACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp CCTCGAATGTCATTACTTCGCGGTGGTTCTGAATTATaGCTTCGAGATACAGAGCTCGCTCTTCATAGAAGC +
Preference number: 6 (lower is better)
Translates to: PRMSLLRGGSEL*LRDTELALHRS
Trigger: GCTTCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATAATTCAGAACCACCGCGAAGTAATGACATTCGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp CTCGAATGTCATTACTTCGCGGTGGTTCTGAATTATTaGTTCGAGATACAGAGCTCGCTCTTCATAGAAGCT +
Preference number: 6 (lower is better)
Translates to: LECHYFAVVLNY*FEIQSSLFIEA
Trigger: AGCTTCTATGAAGAGCGAGCTCTGTATCTCGAAGCAATAATTCAGAACCACCGCGAAGTAATGACATTCGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CCA 72 bp ACCATGAGCGTCCTAAATAGTAACCCTGCCAAGCTCTaGGCAAACAAGTCCTTTATTTGTTTATCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: TMSVLNSNPAKL*ANKSFICLSFG
Trigger: GCCAAAGGATAAACAAATAAAGGACTTGTTTGCCCAGAGCTTGGCAGGGTTACTATTTAGGACGCTCATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp CTGGAGGAGATGGAGAAGACTGGTTATCCAGGCTTATaGCTAGATTATCCCGTATCTTTGCTAGTTTGTACC +
Preference number: 6 (lower is better)
Translates to: LEEMEKTGYPGL*LDYPVSLLVCT
Trigger: GGTACAAACTAGCAAAGATACGGGATAATCTAGCAATAAGCCTGGATAACCAGTCTTCTCCATCTCCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp CAATCTTCTCCCCTGATATGGCTGGTAGGAGTGGAGTaGTTTCTTCTGGATATATCTTTACATCAGCTACAC +
Preference number: 6 (lower is better)
Translates to: QSSPLIWLVGVE*FLLDISLHQLH
Trigger: GTGTAGCTGATGTAAAGATATATCCAGAAGAAATCACTCCACTCCTACCAGCCATATCAGGGGAGAAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000424981.1
CDS CCA 72 bp GCCAGCTCGAAATCAGAAATGAAGGATTTCTTCCATTaGGTGCTAAGCAGCCTTCCAAAGGTCCATATAAAA +
Preference number: 6 (lower is better)
Translates to: ASSKSEMKDFFH*VLSSLPKVHIK
Trigger: TTTTATATGGACCTTTGGAAGGCTGCTTAGCACCCAATGGAAGAAATCCTTCATTTCTGATTTCGAGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp TGCCAGCTCGAAATCAGAAATGAAGGATTTCTTCCATaGGGTGCTAAGCAGCCTTCCAAAGGTCCATATAAA +
Preference number: 6 (lower is better)
Translates to: CQLEIRNEGFLP*GAKQPSKGPYK
Trigger: TTTATATGGACCTTTGGAAGGCTGCTTAGCACCCAATGGAAGAAATCCTTCATTTCTGATTTCGAGCTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp AGCAAAAATCAGAACCTGCTCTTCTGCACAGTTTGTCTGAAGTGCTaGAAGCCACAGAAGAAACAGCCTGATTCCTTCACATCTTATCTT +
Preference number: 6 (lower is better)
Translates to: SKNQNLLFCTVCLKC*KPQKKQPDSFTSYL
Trigger: AAGATAAGATGTGAAGGAATCAGGCTGTTTCTTCTGTGGCTTCAAGCACTTCAGACAAACTGTGCAGAAGAGCAGGTTCTGATTTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000202677.12
CDS TCA 72 bp CACATGTCCTTTATTCTCTTGAATAGGCTGAGGCTCTaGAGAACTCGAATTCTGTGTGTTTTCTGCCTTTTG +
Preference number: 6 (lower is better)
Translates to: HMSFILLNRLRL*RTRILCVFCLL
Trigger: CAAAAGGCAGAAAACACACAGAATTCGAGTTCTTCAGAGCCTCAGCCTATTCAAGAGAATAAAGGACATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp AGGAACTTCAGCACATGGTTCCAACAAAAAGATGTTTaGAGAGTTCGTCAAAAATACCTGCAACAAAGCCTG +
Preference number: 6 (lower is better)
Translates to: RNFSTWFQQKDV*RVRQKYLQQSL
Trigger: CAGGCTTTGTTGCAGGTATTTTTGACGAACTCTGCAAACATCTTTTTGTTGGAACCATGTGCTGAAGTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp TCACTCTTCTGTCTTTCCCTACATTTTCCTTGTGTCTaGTGCAAATCATCTTTCAAATCCAATTCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: SLFCLSLHFPCV*CKSSFKSNSAG
Trigger: CCCTGCTGAATTGGATTTGAAAGATGATTTGCAGCAGACACAAGGAAAATGTAGGGAAAGACAGAAGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp CACAGGTTTGTCCTGGAGAATCCACTTTCTGTACACTaGAACTACTTTTCTTGTTACAGCTATCTCACAGGA +
Preference number: 6 (lower is better)
Translates to: HRFVLENPLSVH*NYFSCYSYLTG
Trigger: TCCTGTGAGATAGCTGTAACAAGAAAAGTAGTTCAAGTGTACAGAAAGTGGATTCTCCAGGACAAACCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp ACAAAAATGCCTGGTGAAATACTTCATTCACGAAGTTaGCATAACCTCGTGTTGACAAGAGAATCCGCTGTA +
Preference number: 6 (lower is better)
Translates to: TKMPGEILHSRS*HNLVLTRESAV
Trigger: TACAGCGGATTCTCTTGTCAACACGAGGTTATGTCAACTTCGTGAATGAAGTATTTCACCAGGCATTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS TCA 72 bp ACAGGTTTGTCCTGGAGAATCCACTTTCTGTACACTTaGACTACTTTTCTTGTTACAGCTATCTCACAGGAA +
Preference number: 6 (lower is better)
Translates to: TGLSWRIHFLYT*TTFLVTAISQE
Trigger: TTCCTGTGAGATAGCTGTAACAAGAAAAGTAGTTCAAGTGTACAGAAAGTGGATTCTCCAGGACAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp GCTGCAAATCATCTTTCAAATCCAATTCAGCAGGGCTaGTGCTTCTTCGAACTAAGATTGTTATTCCTTCAT +
Preference number: 6 (lower is better)
Translates to: AANHLSNPIQQG*CFFELRLLFLH
Trigger: ATGAAGGAATAACAATCTTAGTTCGAAGAAGCAGCAGCCCTGCTGAATTGGATTTGAAAGATGATTTGCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS GCA 72 bp GCAAATCATCTTTCAAATCCAATTCAGCAGGGCTGCTaGTTCTTCGAACTAAGATTGTTATTCCTTCATGTT +
Preference number: 6 (lower is better)
Translates to: ANHLSNPIQQGC*FFELRLLFLHV
Trigger: AACATGAAGGAATAACAATCTTAGTTCGAAGAAGCAGCAGCCCTGCTGAATTGGATTTGAAAGATGATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp AGAATCGAAGTTATGACTCTGGATATACTCATCCTCTaGAGCATTTTGGCGCAAAATGACCTCAATGATTTC +
Preference number: 6 (lower is better)
Translates to: RIEVMTLDILIL*SILAQNDLNDF
Trigger: GAAATCATTGAGGTCATTTTGCGCCAAAATGCTCAAGAGGATGAGTATATCCAGAGTCATAACTTCGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp TATCATGCGCCTAAAAATAATCAAAACAGCTTTACAAGCATCAACTaGTTCTTTCAAGAGCACAGGAACTTCAGCACATGGTTCCAACAA +
Preference number: 6 (lower is better)
Translates to: YHAPKNNQNSFTSIN*FFQEHRNFSTWFQQ
Trigger: TTGTTGGAACCATGTGCTGAAGTTCCTGTGCTCTTGAAAGAACAAGTTGATGCTTGTAAAGCTGTTTTGATTATTTTTAGGCGCATGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 90 bp AAGGTTCATTTAGATTTAGCTGTGACGGTAAAAGGCATTCAGGACTaGTATGGCCAATGTTTTCAAGTAATTTGTCAAGAACATCATCCC +
Preference number: 6 (lower is better)
Translates to: KVHLDLAVTVKGIQD*YGQCFQVICQEHHP
Trigger: GGGATGATGTTCTTGACAAATTACTTGAAAACATTGGCCATACAAGTCCTGAATGCCTTTTACCGTCACAGCTAAATCTAAATGAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000202677.12
ENST00000430436.5
CDS CAA 72 bp TTTCCTTTTGTTCACTTAATTTATCCAGAGGTAGGTTaGTCATCTCAACTCCATAAACGGTTCTTGCAAGCA +
Preference number: 6 (lower is better)
Translates to: FPFVHLIYPEVG*SSQLHKRFLQA
Trigger: TGCTTGCAAGAACCGTTTATGGAGTTGAGATGACAAACCTACCTCTGGATAAATTAAGTGAACAAAAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000202677.12
ENST00000430436.5
ENST00000495793.2