RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RALBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000017797

Ensembl transcript IDs: ENST00000019317.8, ENST00000383432.8, ENST00000458039.3, ENST00000577221.1, ENST00000609094.2

Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGGGCTTGTaGAAGGGAGGCATGCCGCCGCCAGCATGCATGCCAGGGGTCCGG +
Preference number: 1 (lower is better)
Translates to: LGFANTGSLCSSMGL*KGGMPPPACMPGVR
Trigger: CCGGACCCCTGGCATGCATGCTGGCGGCGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR GCA 90 bp CAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTaGAGCAGCATGGGCTTGTGGAAGGGAGGCATGCCGCCGCCAGCA +
Preference number: 1 (lower is better)
Translates to: QTQPSPLGFANTGSL*SSMGLWKGGMPPPA
Trigger: TGCTGGCGGCGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR GCA 90 bp GCCAGGCCAGTGGACTTGTGTGCAGTTCCCACCGGAGCCAGGAGCTaGTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACA +
Preference number: 1 (lower is better)
Translates to: ARPVDLCAVPTGARS*SDSRPSPVHWVLQT
Trigger: TGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTCCTGGCTCCGGTGGGAACTGCACACAAGTCCACTGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CCA 90 bp TGCAAATGTCTGTCAATTGCAATGCCTGGGGCCAAGCCAGGCCAGTaGACTTGTGTGCAGTTCCCACCGGAGCCAGGAGCTGCTCAGACA +
Preference number: 1 (lower is better)
Translates to: CKCLSIAMPGAKPGQ*TCVQFPPEPGAAQT
Trigger: TGTCTGAGCAGCTCCTGGCTCCGGTGGGAACTGCACACAAGTCCACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGACAGACATTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CCA 90 bp CCTCATTTACCGTATGAAATGCAAATGTCTGTCAATTGCAATGCCTaGGGCCAAGCCAGGCCAGTGGACTTGTGTGCAGTTCCCACCGGA +
Preference number: 1 (lower is better)
Translates to: PHLPYEMQMSVNCNA*GQARPVDLCAVPTG
Trigger: TCCGGTGGGAACTGCACACAAGTCCACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGACAGACATTTGCATTTCATACGGTAAATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR TCA 90 bp GTACAAAGTGAGCTGGAAACAAAACACTGTGTTCCCCCTTGGCCTTaGAGAAGTGCCTCAACCAACTCCTCGCCAGCTGCAGAGTACTCA +
Preference number: 1 (lower is better)
Translates to: VQSELETKHCVPPWP*RSASTNSSPAAEYS
Trigger: TGAGTACTCTGCAGCTGGCGAGGAGTTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAACACAGTGTTTTGTTTCCAGCTCACTTTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR TCA 90 bp GAGCAGGGAGATGGAACAGAAGCTTGCTTGGACCACTCCATGTATTaGCCGGGTACTGCACTAACTCTAAGAACCGCGCACCAAGAAAAC +
Preference number: 1 (lower is better)
Translates to: EQGDGTEACLDHSMY*PGTALTLRTAHQEN
Trigger: GTTTTCTTGGTGCGCGGTTCTTAGAGTTAGTGCAGTACCCGGTCAATACATGGAGTGGTCCAAGCAAGCTTCTGTTCCATCTCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR GCA 90 bp GTGCTGAGTCCTCATTTACCGTATGAAATGCAAATGTCTGTCAATTaGAATGCCTGGGGCCAAGCCAGGCCAGTGGACTTGTGTGCAGTT +
Preference number: 1 (lower is better)
Translates to: VLSPHLPYEMQMSVN*NAWGQARPVDLCAV
Trigger: AACTGCACACAAGTCCACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGACAGACATTTGCATTTCATACGGTAAATGAGGACTCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR TCA 90 bp GACATGCTGATTATGGTTGGCTGTGCTGAGTCCTCATTTACCGTATaGAATGCAAATGTCTGTCAATTGCAATGCCTGGGGCCAAGCCAG +
Preference number: 1 (lower is better)
Translates to: DMLIMVGCAESSFTV*NANVCQLQCLGPSQ
Trigger: CTGGCTTGGCCCCAGGCATTGCAATTGACAGACATTTGCATTTCATACGGTAAATGAGGACTCAGCACAGCCAACCATAATCAGCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CCA 90 bp AAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATaGAACAGAAGCTTGCTTGGACCACTCCATGTATTGACCGGGTAC +
Preference number: 1 (lower is better)
Translates to: KVGCSICSRISGAGR*NRSLLGPLHVLTGY
Trigger: GTACCCGGTCAATACATGGAGTGGTCCAAGCAAGCTTCTGTTCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR GCA 90 bp TGGAACAGAAGCTTGCTTGGACCACTCCATGTATTGACCGGGTACTaGACTAACTCTAAGAACCGCGCACCAAGAAAACCAAAACCAAAA +
Preference number: 1 (lower is better)
Translates to: WNRSLLGPLHVLTGY*TNSKNRAPRKPKPK
Trigger: TTTTGGTTTTGGTTTTCTTGGTGCGCGGTTCTTAGAGTTAGTGCAGTACCCGGTCAATACATGGAGTGGTCCAAGCAAGCTTCTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR TCA 90 bp TCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTGGCTGTGCTaGGTCCTCATTTACCGTATGAAATGCAAATGTCTGTCAATTGCA +
Preference number: 1 (lower is better)
Translates to: SRPVYPRHADYGWLC*VLIYRMKCKCLSIA
Trigger: TGCAATTGACAGACATTTGCATTTCATACGGTAAATGAGGACTCAGCACAGCCAACCATAATCAGCATGTCTGGGATAGACTGGTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR GCA 90 bp CATGTAGCTGACCAAAGCATTCACATGTGGGGCCTAAACATTTACTaGTTCTTGGTCTTTTGGCTAAAGTTGGGTGTAGTATCTGTTCTA +
Preference number: 1 (lower is better)
Translates to: HVADQSIHMWGLNIY*FLVFWLKLGVVSVL
Trigger: TAGAACAGATACTACACCCAACTTTAGCCAAAAGACCAAGAAGCAGTAAATGTTTAGGCCCCACATGTGAATGCTTTGGTCAGCTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCTCCCCGCTGGACTaGACTGCCGGGGGCCGGTGG +
Preference number: 2 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGSSPLD*TAGGRW
Trigger: CCACCGGCCCCCGGCAGTGCAGTCCAGCGGGGAGGA...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCCTCCCCGCTGGACTaGACTGCCGGGGGCCGGTGG +
Preference number: 2 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPSSPLD*TAGGRW
Trigger: CCACCGGCCCCCGGCAGTGCAGTCCAGCGGGGAGGA...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGCAGCCTCCTCCCCGCTaGACTGCACTGCCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMQPPPR*TALPGA
Trigger: GGCCCCCGGCAGTGCAGTCCAGCGGGGAGGAGGCTG...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CAA 90 bp CCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGGGCTaGTGGAAGGGAGGCATGCCGCCGCCAGCATGCATGCCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: PLGFANTGSLCSSMG*WKGGMPPPACMPGV
Trigger: GACCCCTGGCATGCATGCTGGCGGCGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCCGCCGCCAGCATGCATaGCAGGGGTCCGGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPRRQHA*QGSGVL
Trigger: GAGAACCCCGGACCCCTGGCATGCATGCTGGCGGCG...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGATGCCGCCGCCAGCATaGATGCCAGGGGTCCGGGGT +
Preference number: 2 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMMPPPA*MPGVRG
Trigger: ACCCCGGACCCCTGGCATGCATGCTGGCGGCGGCAT...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCATGCCGCCGCCAGCATaGATGCCAGGGGTCCGGGGT +
Preference number: 2 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGMPPPA*MPGVRG
Trigger: ACCCCGGACCCCTGGCATGCATGCTGGCGGCGGCAT...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTGTGGAAGGGAGGCATaGCGCCGCCAGCATGCATGC +
Preference number: 2 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPCGREA*RRQHAC
Trigger: GCATGCATGCTGGCGGCGGCATGCCTCCCTTCCACA...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR TCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGCACCAGGCGCTGCTCTaGCCAGTCAGAGAACGTGAG +
Preference number: 2 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMHQALL*PVRERE
Trigger: CTCACGTTCTCTGACTGGTCAGAGCAGCGCCTGGTG...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CAA 90 bp ATGTCTGTCAATTGCAATGCCTGGGGCCAAGCCAGGCCAGTGGACTaGTGTGCAGTTCCCACCGGAGCCAGGAGCTGCTCAGACAGCAGA +
Preference number: 2 (lower is better)
Translates to: MSVNCNAWGQARPVD*CAVPTGARSCSDSR
Trigger: TCTGCTGTCTGAGCAGCTCCTGGCTCCGGTGGGAACTGCACACAAGTCCACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGACAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR TCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCCCGTGTCTGCAGAGGTaGGGGGTACAAAGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGPCLQR*GVQSEL
Trigger: CAGCTCACTTTGTACCCCTCACCTCTGCAGACACGG...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGACACCCACCAGGCGCTaGTCTGACCAGTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMTPTRR*SDQSEN
Trigger: GTTCTCTGACTGGTCAGAGCAGCGCCTGGTGGGTGT...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTTCGCCCTGGCTGGAGTaGAGTGGTACGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCSPWLE*SGTIMA
Trigger: AGCCATGATCGTACCACTGCACTCCAGCCAGGGCGA...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCTCGGCTTCCCAAAGTaGCGGGATTACAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCLGFPK*RDYRRE
Trigger: CTCACGCCTGTAATCCCGGCACTTTGGGAAGCCGAG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTGTTGCCAGGCTGGAGTaGAGTGGCGCGATCTTTGCT +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCVARLE*SGAIFA
Trigger: AGCAAAGATCGCGCCACTGCACTCCAGCCTGGCAAC...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCGTTCCCCCTTGGCCTTaGAGAAGTGCCTCAACCAAC +
Preference number: 2 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGVPPWP*RSASTN
Trigger: GTTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAAC...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR TCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCGTTCCCCCTTGGCCTTaGAGAAGTGCCTCAACCAAC +
Preference number: 2 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPVPPWP*RSASTN
Trigger: GTTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAAC...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCGGTTCTCCCCGTGTCTaGAGAGGTGAGGGGTACAAA +
Preference number: 2 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPGSPRV*RGEGYK
Trigger: TTTGTACCCCTCACCTCTGCAGACACGGGGAGAACC...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCGGTTCTCCCCGTGTCTaGAGAGGTGAGGGGTACAAA +
Preference number: 2 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGGSPRV*RGEGYK
Trigger: TTTGTACCCCTCACCTCTGCAGACACGGGGAGAACC...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCAATCTCGCCCTGGCTaGAGTGCAGTGGTACGATCA +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCQSRPG*SAVVRS
Trigger: TGATCGTACCACTGCACTCCAGCCAGGGCGAGATTG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTTGGCCTTGAAGAAGTaGCTCAACCAACTCCTCGCC +
Preference number: 2 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGLALKK*LNQLLA
Trigger: GGCGAGGAGTTGGTTGAGGCACTTCTTCAAGGCCAA...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTACGATCATGGCTCACTaGAGCCTCAAACTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCTIMAH*SLKLLG
Trigger: ACCCAGGAGTTTGAGGCTGCAGTGAGCCATGATCGT...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTGGCTGCTGCAAGCTATaGACAACTAACGTGAAATCC +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCGCCKL*TTNVKS
Trigger: GGATTTCACGTTAGTTGTTCATAGCTTGCAGCAGCC...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAGGCAGGGGAATCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPGRGIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGATTCCCCTGCC...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTAATTTGGAACACAGATaGTGCTACAGGTCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCNLEHR*CYRSGL
Trigger: AAGCCCTGACCTGTAGCAGCATCTGTGTTCCAAATT...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCACCAGGAGGCAGAGGTTaGAGTAAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPPGGRG*SKPRSR
Trigger: GCGTGATCTCGGCTTACTGCAACCTCTGCCTCCTGG...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCATCAGCCCCTAGCTGTTaGAAGGATGGGCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPSAPSC*KDGQQL
Trigger: GAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGA...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTCAGCCTCCTCCCCGCTaGACTGCACTGCCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVQPPPR*TALPGA
Trigger: GGCCCCCGGCAGTGCAGTCCAGCGGGGAGGAGGCTG...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCAAAGCATTCACATGTaGGGCCTAAACATTTACTGC +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCQSIHM*GLNIYC
Trigger: GCAGTAAATGTTTAGGCCCCACATGTGAATGCTTTG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CAA 90 bp GGAGCAGGGAGATGGAACAGAAGCTTGCTTGGACCACTCCATGTATaGACCGGGTACTGCACTAACTCTAAGAACCGCGCACCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: GAGRWNRSLLGPLHV*TGYCTNSKNRAPRK
Trigger: TTTTCTTGGTGCGCGGTTCTTAGAGTTAGTGCAGTACCCGGTCAATACATGGAGTGGTCCAAGCAAGCTTCTGTTCCATCTCCCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTTATGAACAACTAACGTaGAATCCTCCTAATGGAAGG +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCYEQLT*NPPNGR
Trigger: CCTTCCATTAGGAGGATTTCACGTTAGTTGTTCATA...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTGGCCTAAACATTTACTaGTTCTTGGTCTTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCGLNIY*FLVFWL
Trigger: TAGCCAAAAGACCAAGAAGCAGTAAATGTTTAGGCC...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTTGCTTCTTGGTCTTTTaGCTAAAGTTGGGTGTAGTA +
Preference number: 2 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCCFLVF*LKLGVV
Trigger: TACTACACCCAACTTTAGCCAAAAGACCAAGAAGCA...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTCGCCGCCAGCATGCATaGCAGGGGTCCGGGGTTCTC +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGRRQHA*QGSGVL
Trigger: GAGAACCCCGGACCCCTGGCATGCATGCTGGCGGCG...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCATTCAAGCTATTCTCCTaGCTCAGCCTCCCAAGCAGC +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPFKLFS*LSLPSS
Trigger: GCTGCTTGGGAGGCTGAGGCAGGAGAATAGCTTGAA...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCATCTGGAGCAGGGAGATaGAACAGAAGCTTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPSGAGR*NRSLLG
Trigger: TCCAAGCAAGCTTCTGTTCCATCTCCCTGCTCCAGA...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTACCGGAGCCAGGAGCTaGTCAGACAGCAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVTGARS*SDSRPS
Trigger: GCTGGGTCTGCTGTCTGAGCAGCTCCTGGCTCCGGT...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCATTTGAGACAGAATCTTaGTCTGTTGCCAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPFETES*SVARLE
Trigger: CTCCAGCCTGGCAACAGAGCAAGATTCTGTCTCAAA...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTAGCAGCATGGGCTTGTaGAAGGGAGGCATGCCGCCG +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGSSMGL*KGGMPP
Trigger: CGGCGGCATGCCTCCCTTCCACAAGCCCATGCTGCT...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAACACCAAAGAAAGGCTaGGGAGAGGGGTGGATTTTT +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPTPKKG*GEGWIF
Trigger: AAAAATCCACCCCTCTCCCCAGCCTTTCTTTGGTGT...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAAATACAAAAATTAGCTaGGTGTGGCGGCAGGCGCCT +
Preference number: 2 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGNTKIS*VWRQAP
Trigger: AGGCGCCTGCCGCCACACCCAGCTAATTTTTGTATT...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTCACCAGGCGCTGCTCTaGCCAGTCAGAGAACGTGAG +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGHQALL*PVRERE
Trigger: CTCACGTTCTCTGACTGGTCAGAGCAGCGCCTGGTG...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTGCCAGTGGACTTGTGTaGAGTTCCCACCGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGASGLV*SSHRSQ
Trigger: CTGGCTCCGGTGGGAACTGCACACAAGTCCACTGGC...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAAAAGCAGGGTCTGAATaGAGCCCTGTTAAGCAATGC +
Preference number: 2 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGKAGSE*SPVKQC
Trigger: GCATTGCTTAACAGGGCTGCATTCAGACCCTGCTTT...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTCCGTGTCTGCAGAGGTaGGGGGTACAAAGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGPCLQR*GVQSEL
Trigger: CAGCTCACTTTGTACCCCTCACCTCTGCAGACACGG...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR TCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAATAGTTGCATGTAGCTaGCCAAAGCATTCACATGTG +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPIVACS*PKHSHV
Trigger: CACATGTGAATGCTTTGGTCAGCTACATGCAACTAT...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTACACCCACCAGGCGCTaGTCTGACCAGTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGTPTRR*SDQSEN
Trigger: GTTCTCTGACTGGTCAGAGCAGCGCCTGGTGGGTGT...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTGTCTGTCAATTGCAATaGCTGGGGCCAAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGVCQLQ*LGPSQA
Trigger: GGCCTGGCTTGGCCCCAGGCATTGCAATTGACAGAC...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR GCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAACCAAAACCATGTCATaGCTCTTAGCTGAGCTAAGG +
Preference number: 2 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGTKTMS*LLAELR
Trigger: CCTTAGCTCAGCTAAGAGGCATGACATGGTTTTGGT...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAGCAGCTCTGTCTGAATaGTTTTACACACAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPAALSE*FYTQRR
Trigger: TCTTCTCTGTGTGTAAAAGCATTCAGACAGAGCTGC...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTGCCAAGCCAGGCCAGTaGACTTGTGTGCAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGAKPGQ*TCVQFP
Trigger: TGGGAACTGCACACAAGTCCACTGGCCTGGCTTGGC...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTGTCAATTGCAATGCCTaGGGCCAAGCCAGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGVNCNA*GQARPV
Trigger: CACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGAC...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGACATAAACGTGTCTCTTaGCCAAGAAGCTTCCTTCAC +
Preference number: 2 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGHKRVS*PRSFLH
Trigger: GTGAAGGAAGCTTCTTGGCCAAGAGACACGTTTATG...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CAA 90 bp ATGTGGGGCCTAAACATTTACTGCTTCTTGGTCTTTTGGCTAAAGTaGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGA +
Preference number: 2 (lower is better)
Translates to: MWGLNIYCFLVFWLK*GVVSVLGFLEQGDG
Trigger: TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCAAAAGACCAAGAAGCAGTAAATGTTTAGGCCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAGTAGGATCAAGGAAATaGATAAGGCTTAGGATCCAG +
Preference number: 2 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGVGSRK*IRLRIQ
Trigger: CTGGATCCTAAGCCTTATTCATTTCCTTGATCCTAC...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR TCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAGTCATGCCTCTTAGCTaGGCTAAGGAAATGCATTAT +
Preference number: 2 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGVMPLS*AKEMHY
Trigger: ATAATGCATTTCCTTAGCTCAGCTAAGAGGCATGAC...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCACCTGTTAAGCAATGCTaGCAGTATACTTCACTTTGT +
Preference number: 2 (lower is better)
Translates to: ISTVHDSSISRADYSTLPPVKQC*QYTSLC
Trigger: ACAAAGTGAAGTATACTGGCAGCATTGCTTAACAGG...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAAGCCCTGTTAAGCAATaGTGCCAGTATACTTCACTT +
Preference number: 2 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGSPVKQ*CQYTSL
Trigger: AAGTGAAGTATACTGGCAGCATTGCTTAACAGGGCT...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CAA 90 bp AAGCATTCACATGTGGGGCCTAAACATTTACTGCTTCTTGGTCTTTaGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: KHSHVGPKHLLLLGL*AKVGCSICSRISGA
Trigger: TGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCAAAAGACCAAGAAGCAGTAAATGTTTAGGCCCCACATGTGAATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CAA 90 bp GCTGACCAAAGCATTCACATGTGGGGCCTAAACATTTACTGCTTCTaGGTCTTTTGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTT +
Preference number: 2 (lower is better)
Translates to: ADQSIHMWGLNIYCF*VFWLKLGVVSVLGF
Trigger: AAATCCTAGAACAGATACTACACCCAACTTTAGCCAAAAGACCAAGAAGCAGTAAATGTTTAGGCCCCACATGTGAATGCTTTGGTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR GCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTCAAATGTCTGTCAATTaGAATGCCTGGGGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVQMSVN*NAWGQA
Trigger: GGCTTGGCCCCAGGCATTGCAATTGACAGACATTTG...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR TCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTGTGAGGGGTACAAAGTaGGCTGGAAACAAAACACTG +
Preference number: 2 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGVRGTK*AGNKTL
Trigger: CAGTGTTTTGTTTCCAGCTCACTTTGTACCCCTCAC...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR GCA 72 bp CCCTCTGCAGCAGCATGGGCTTGTGGAAGGGAGGCATaGCGCCGCCAGCATGCATGCCAGGGGTCCGGGGTT +
Preference number: 3 (lower is better)
Translates to: PSAAAWACGREA*RRQHACQGSGV
Trigger: AACCCCGGACCCCTGGCATGCATGCTGGCGGCGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR GCA 72 bp GTGGACTTGTGTGCAGTTCCCACCGGAGCCAGGAGCTaGTCAGACAGCAGACCCAGCCCAGTCCACTGGGTT +
Preference number: 3 (lower is better)
Translates to: VDLCAVPTGARS*SDSRPSPVHWV
Trigger: AACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTCCTGGCTCCGGTGGGAACTGCACACAAGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTGCAGCAGCATGGGCTaGTGGAAGGGAGGCATGCCG +
Preference number: 3 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPCSSMG*WKGGMP
Trigger: CGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCA...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR GCA 72 bp CCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTaGAGCAGCATGGGCTTGTGGAAGGGAGGCATGCCG +
Preference number: 3 (lower is better)
Translates to: PSPLGFANTGSL*SSMGLWKGGMP
Trigger: CGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CCA 72 bp CTGTCAATTGCAATGCCTGGGGCCAAGCCAGGCCAGTaGACTTGTGTGCAGTTCCCACCGGAGCCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: LSIAMPGAKPGQ*TCVQFPPEPGA
Trigger: AGCTCCTGGCTCCGGTGGGAACTGCACACAAGTCCACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGACACTGTGTTCCCCCTaGGCCTTGAAGAAGTGCCTC +
Preference number: 3 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMTLCSP*ALKKCL
Trigger: GAGGCACTTCTTCAAGGCCAAGGGGGAACACAGTGT...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCACACTGTGTTCCCCCTaGGCCTTGAAGAAGTGCCTC +
Preference number: 3 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPTLCSP*ALKKCL
Trigger: GAGGCACTTCTTCAAGGCCAAGGGGGAACACAGTGT...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGTGTTCCCCCTTGGCCTaGAAGAAGTGCCTCAACCAA +
Preference number: 3 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMCSPLA*KKCLNQ
Trigger: TTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAACA...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR TCA 72 bp GAGCTGGAAACAAAACACTGTGTTCCCCCTTGGCCTTaGAGAAGTGCCTCAACCAACTCCTCGCCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: ELETKHCVPPWP*RSASTNSSPAA
Trigger: TGCAGCTGGCGAGGAGTTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAACACAGTGTTTTGTTTCCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR GCA 72 bp AACAAAACACTGTGTTCCCCCTTGGCCTTGAAGAAGTaGCTCAACCAACTCCTCGCCAGCTGCAGAGTACTC +
Preference number: 3 (lower is better)
Translates to: NKTLCSPLALKK*LNQLLASCRVL
Trigger: GAGTACTCTGCAGCTGGCGAGGAGTTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAACACAGTGTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTTGGGAATGTAATAATTaGGAACACAGATGCTGCTAC +
Preference number: 3 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCWECNN*EHRCCY
Trigger: GTAGCAGCATCTGTGTTCCAAATTATTACATTCCCA...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CAA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCACAGGGATTCGCCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: ISTVHDSSISRADYSTLPQGFAM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGCGAATCCCTG...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR TCA 72 bp GATGGAACAGAAGCTTGCTTGGACCACTCCATGTATTaGCCGGGTACTGCACTAACTCTAAGAACCGCGCAC +
Preference number: 3 (lower is better)
Translates to: DGTEACLDHSMY*PGTALTLRTAH
Trigger: GTGCGCGGTTCTTAGAGTTAGTGCAGTACCCGGTCAATACATGGAGTGGTCCAAGCAAGCTTCTGTTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR GCA 72 bp AAAACTCAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTaGAAGGATGGGCAGCAGCTCTGTCTGAATGCTTTT +
Preference number: 3 (lower is better)
Translates to: KTQQSRSSAPSC*KDGQQLCLNAF
Trigger: AAAAGCATTCAGACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTGAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CCA 72 bp CCGTATGAAATGCAAATGTCTGTCAATTGCAATGCCTaGGGCCAAGCCAGGCCAGTGGACTTGTGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: PYEMQMSVNCNA*GQARPVDLCAV
Trigger: AACTGCACACAAGTCCACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGACAGACATTTGCATTTCATACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCACTGCTTCTTGGTCTTTaGGCTAAAGTTGGGTGTAGT +
Preference number: 3 (lower is better)
Translates to: ISTVHDSSISRADYSTLPLLLGL*AKVGCS
Trigger: ACTACACCCAACTTTAGCCAAAAGACCAAGAAGCAG...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CCA 72 bp TGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATaGAACAGAAGCTTGCTTGGACCACTCCATGTATTG +
Preference number: 3 (lower is better)
Translates to: CSICSRISGAGR*NRSLLGPLHVL
Trigger: CAATACATGGAGTGGTCCAAGCAAGCTTCTGTTCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR TCA 72 bp ATTATGGTTGGCTGTGCTGAGTCCTCATTTACCGTATaGAATGCAAATGTCTGTCAATTGCAATGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: IMVGCAESSFTV*NANVCQLQCLG
Trigger: CCCCAGGCATTGCAATTGACAGACATTTGCATTTCATACGGTAAATGAGGACTCAGCACAGCCAACCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTGTTCCCCCTTGGCCTaGAAGAAGTGCCTCAACCAA +
Preference number: 3 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGCSPLA*KKCLNQ
Trigger: TTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAACA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR-3UTR CAA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAAACATTTACTGCTTCTaGGTCTTTTGGCTAAAGTTG +
Preference number: 3 (lower is better)
Translates to: ISTVHDSSISRADYSTLPNIYCF*VFWLKL
Trigger: CAACTTTAGCCAAAAGACCAAGAAGCAGTAAATGTT...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR-3UTR CAA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCACTCCTGGCTAATTTTTaGTATTTTAGTACAGACAGG +
Preference number: 3 (lower is better)
Translates to: ISTVHDSSISRADYSTLPLLANF*YFSTDR
Trigger: CCTGTCTGTACTAAAATACAAAAAATTAGCCAGGAG...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CCA 72 bp AATGCATTATATGACTGTGTCCATAAACGTGTCTCTTaGCCAAGAAGCTTCCTTCACACAGTTAACCTTTCT +
Preference number: 3 (lower is better)
Translates to: NALYDCVHKRVS*PRSFLHTVNLS
Trigger: AGAAAGGTTAACTGTGTGAAGGAAGCTTCTTGGCCAAGAGACACGTTTATGGACACAGTCATATAATGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR TCA 72 bp TCCATTTTGCTAATATACGTAATAGTTGCATGTAGCTaGCCAAAGCATTCACATGTGGGGCCTAAACATTTA +
Preference number: 3 (lower is better)
Translates to: SILLIYVIVACS*PKHSHVGPKHL
Trigger: TAAATGTTTAGGCCCCACATGTGAATGCTTTGGTCAGCTACATGCAACTATTACGTATATTAGCAAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCCAGCCTCCTCCCCGCTaGACTGCACTGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPQPPPR*TALPGA
Trigger: GGCCCCCGGCAGTGCAGTCCAGCGGGGAGGAGGCTG...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGACCCCGGTGTGGTGCTaGCGAAGGTGGCTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMTPVWC*RRWLAG
Trigger: GCCCGCGAGCCACCTTCGCCAGCACCACACCGGGGT...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGCGCCGCCAGCATGCATaGCAGGGGTCCGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMRRQHA*QGSGVL
Trigger: GAGAACCCCGGACCCCTGGCATGCATGCTGGCGGCG...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGTGTGGAAGGGAGGCATaGCGCCGCCAGCATGCATGC +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMCGREA*RRQHAC
Trigger: GCATGCATGCTGGCGGCGGCATGCCTCCCTTCCACA...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGACCGGAGCCAGGAGCTaGTCAGACAGCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMTGARS*SDSRPS
Trigger: GCTGGGTCTGCTGTCTGAGCAGCTCCTGGCTCCGGT...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGTTGGCTCGCTGCATCTaGAGCAGCCGCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMLARCI*SSRSCT
Trigger: CGTGCAGCTGCGGCTGCTCCAGATGCAGCGAGCCAA...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGAGCAGCATGGGCTTGTaGAAGGGAGGCATGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMSSMGL*KGGMPP
Trigger: CGGCGGCATGCCTCCCTTCCACAAGCCCATGCTGCT...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CAA 72 bp TTTGCAAACACAGGCTCCCTCTGCAGCAGCATGGGCTaGTGGAAGGGAGGCATGCCGCCGCCAGCATGCATG +
Preference number: 4 (lower is better)
Translates to: FANTGSLCSSMG*WKGGMPPPACM
Trigger: CATGCATGCTGGCGGCGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCCTCGCGGGCATCTCCTaGAACGGCCTTGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGLAGIS*NGLEDG
Trigger: TCCATCCTCAAGGCCGTTGCAGGAGATGCCCGCGAG...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGGCCAGTGGACTTGTGTaGAGTTCCCACCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMASGLV*SSHRSQ
Trigger: CTGGCTCCGGTGGGAACTGCACACAAGTCCACTGGC...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCGCCAGTGGACTTGTGTaGAGTTCCCACCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGASGLV*SSHRSQ
Trigger: CTGGCTCCGGTGGGAACTGCACACAAGTCCACTGGC...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCCATTACACCCCGGTGTaGTGCTGGCGAAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPHYTPV*CWRRWL
Trigger: GAGCCACCTTCGCCAGCACCACACCGGGGTGTAATG...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR TCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGCTCAGCTCCCGAAGTTaGGAGCTTTCCTTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMLSSRS*ELSLRQ
Trigger: CTGGCGCAAGGAAAGCTCTCAACTTCGGGAGCTGAG...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR TCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCCTCCTGCAACGGCCTTaGGGATGGAAAGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGLLQRP*GWKGLS
Trigger: GGAAAGCCCTTTCCATCCTCAAGGCCGTTGCAGGAG...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR TCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCCCGTGTCTGCAGAGGTaGGGGGTACAAAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPPCLQR*GVQSEL
Trigger: CAGCTCACTTTGTACCCCTCACCTCTGCAGACACGG...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCACACCCACCAGGCGCTaGTCTGACCAGTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGTPTRR*SDQSEN
Trigger: GTTCTCTGACTGGTCAGAGCAGCGCCTGGTGGGTGT...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGAACACAGGCTCCCTCTaGAGCAGCATGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMNTGSL*SSMGLW
Trigger: CCACAAGCCCATGCTGCTGCAGAGGGAGCCTGTGTT...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGGTCTGTCAATTGCAATaGCTGGGGCCAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMVCQLQ*LGPSQA
Trigger: GGCCTGGCTTGGCCCCAGGCATTGCAATTGACAGAC...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGGCCAAGCCAGGCCAGTaGACTTGTGTGCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMAKPGQ*TCVQFP
Trigger: TGGGAACTGCACACAAGTCCACTGGCCTGGCTTGGC...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCGCCAAGCCAGGCCAGTaGACTTGTGTGCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGAKPGQ*TCVQFP
Trigger: TGGGAACTGCACACAAGTCCACTGGCCTGGCTTGGC...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCGTCAATTGCAATGCCTaGGGCCAAGCCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGVNCNA*GQARPV
Trigger: CACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGAC...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCGTCAATTGCAATGCCTaGGGCCAAGCCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPVNCNA*GQARPV
Trigger: CACTGGCCTGGCTTGGCCCCAGGCATTGCAATTGAC...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTTTCAAGCTATTCTCCTaGCTCAGCCTCCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCFKLFS*LSLPSS
Trigger: GCTGCTTGGGAGGCTGAGGCAGGAGAATAGCTTGAA...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCCTATCCCAGACATGCTaGTTATGGTTGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPLSQTC*LWLAVL
Trigger: CAGCACAGCCAACCATAATCAGCATGTCTGGGATAG...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCCAAATGTCTGTCAATTaGAATGCCTGGGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPQMSVN*NAWGQA
Trigger: GGCTTGGCCCCAGGCATTGCAATTGACAGACATTTG...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR TCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGGTGAGGGGTACAAAGTaGGCTGGAAACAAAACACTG +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMVRGTK*AGNKTL
Trigger: CAGTGTTTTGTTTCCAGCTCACTTTGTACCCCTCAC...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR TCA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTATGGTTGGCTGTGCTaGGTCCTCATTTACCGTATG +
Preference number: 4 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPYGWLC*VLIYRM
Trigger: CATACGGTAAATGAGGACTCAGCACAGCCAACCATA...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTAAAGCAGGGTCTGAATaGAGCCCTGTTAAGCAATGC +
Preference number: 4 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCKAGSE*SPVKQC
Trigger: GCATTGCTTAACAGGGCTGCATTCAGACCCTGCTTT...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTTTTGAGACAGAATCTTaGTCTGTTGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCFETES*SVARLE
Trigger: CTCCAGCCTGGCAACAGAGCAAGATTCTGTCTCAAA...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCATAAACGTGTCTCTTaGCCAAGAAGCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCHKRVS*PRSFLH
Trigger: GTGAAGGAAGCTTCTTGGCCAAGAGACACGTTTATG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAGGCAGGGGAATCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGGRGIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGATTCCCCTGCC...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTTCCTCCCCGCTGGACTaGACTGCCGGGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVSSPLD*TAGGRW
Trigger: CCACCGGCCCCCGGCAGTGCAGTCCAGCGGGGAGGA...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCATCGCCCTGGCTGGAGTaGAGTGGTACGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPSPWLE*SGTIMA
Trigger: AGCCATGATCGTACCACTGCACTCCAGCCAGGGCGA...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCACTCGGCTTCCCAAAGTaGCGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPLGFPK*RDYRRE
Trigger: CTCACGCCTGTAATCCCGGCACTTTGGGAAGCCGAG...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTTTAAAAACCATCAAGTaGAGTGCACATTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCLKTIK*SAHSQY
Trigger: GTACTGGGAATGTGCACTTCACTTGATGGTTTTTAA...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCTGACTACAGCACATTaGCACAGGTTAGAGAATAAA +
Preference number: 4 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCLTTAH*HRLENK
Trigger: TTTATTCTCTAACCTGTGGCAATGTGCTGTAGTCAG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp ACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTGCAGCAGCATGTCCTCATTTACCGTATaGAATGCAAATGTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TQPSPLGFANTGSLCSSMSSFTV*NANVCQ
Trigger: TTGACAGACATTTGCATTTCATACGGTAAATGAGGA...CATGCTGCTGCAGAGGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR TCA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTATTGGACACTACAAATaGAGTGTTCCACAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCIGHYK*SVPQKE
Trigger: TTCTTTCTGTGGAACACTTCATTTGTAGTGTCCAAT...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTATGCCGCCGCCAGCATaGATGCCAGGGGTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVMPPPA*MPGVRG
Trigger: ACCCCGGACCCCTGGCATGCATGCTGGCGGCGGCAT...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CAA 72 bp AGATGGAACAGAAGCTTGCTTGGACCACTCCATGTATaGACCGGGTACTGCACTAACTCTAAGAACCGCGCA +
Preference number: 4 (lower is better)
Translates to: RWNRSLLGPLHV*TGYCTNSKNRA
Trigger: TGCGCGGTTCTTAGAGTTAGTGCAGTACCCGGTCAATACATGGAGTGGTCCAAGCAAGCTTCTGTTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTACACCCCGGTGTGGTaGTGGCGAAGGTGGCTCGCG +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGYTPVW*WRRWLA
Trigger: CGCGAGCCACCTTCGCCAGCACCACACCGGGGTGTA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR GCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAACGATCATGGCTCACTaGAGCCTCAAACTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGTIMAH*SLKLLG
Trigger: ACCCAGGAGTTTGAGGCTGCAGTGAGCCATGATCGT...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTTGGTGCTGGCGAAGGTaGCTCGCGGGCATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVWCWRR*LAGISC
Trigger: GCAGGAGATGCCCGCGAGCCACCTTCGCCAGCACCA...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTGTGGAAGGGAGGCATaGCGCCGCCAGCATGCATGC +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGCGREA*RRQHAC
Trigger: GCATGCATGCTGGCGGCGGCATGCCTCCCTTCCACA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTACCGGAGCCAGGAGCTaGTCAGACAGCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGTGARS*SDSRPS
Trigger: GCTGGGTCTGCTGTCTGAGCAGCTCCTGGCTCCGGT...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAAGGGATTCGCCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGRDSPC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGGCGAATCCCT...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGACACATTCCCAGTACCTaGTACTCTGTAGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGHIPST*YSVDAF
Trigger: GAAGGCATCTACAGAGTATCAGGTACTGGGAATGTG...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTATCCATTACACCTGTaGCTGCCGCCGCGCGACCGT +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGYPLHL*LPPRDR
Trigger: ACGGTCGCGCGGCGGCAGGCACAGGTGTAATGGATA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383432.8
CDS-3UTR CCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAACACCAAAGAAAGGCTaGGGAGAGGGGTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGTPKKG*GEGWIF
Trigger: AAAAATCCACCCCTCTCCCCAGCCTTTCTTTGGTGT...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAGTCATGCCTCTTAGCTaGGCTAAGGAAATGCATTAT +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPVMPLS*AKEMHY
Trigger: ATAATGCATTTCCTTAGCTCAGCTAAGAGGCATGAC...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTAACACAGGCTCCCTCTaGAGCAGCATGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGNTGSL*SSMGLW
Trigger: CCACAAGCCCATGCTGCTGCAGAGGGAGCCTGTGTT...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAAACCATCAAGTGAAGTaGACATTCCCAGTACCTGAT +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPNHQVK*TFPVPD
Trigger: ATCAGGTACTGGGAATGTGCACTTCACTTGATGGTT...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
3UTR CAA 72 bp CAAGAAGCTTCCTTCACACAGTTAACCTTTCTTTTCTaGCTGATGGCCCTCATACCACTGAGCCTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: QEASFTQLTFLF*LMALIPLSLCL
Trigger: TAAGCAGAGGCTCAGTGGTATGAGGGCCATCAGCAAGAAAAGAAAGGTTAACTGTGTGAAGGAAGCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTGGTTCTCCCCGTGTCTaGAGAGGTGAGGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVGSPRV*RGEGYK
Trigger: TTTGTACCCCTCACCTCTGCAGACACGGGGAGAACC...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTGGTTCTCCCCGTGTCTaGAGAGGTGAGGGGTACAAA +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGGSPRV*RGEGYK
Trigger: TTTGTACCCCTCACCTCTGCAGACACGGGGAGAACC...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAGGCCTAAACATTTACTaGTTCTTGGTCTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPGLNIY*FLVFWL
Trigger: TAGCCAAAAGACCAAGAAGCAGTAAATGTTTAGGCC...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCATGCTTCTTGGTCTTTTaGCTAAAGTTGGGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPCFLVF*LKLGVV
Trigger: TACTACACCCAACTTTAGCCAAAAGACCAAGAAGCA...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGACAAAGCATTCACATGTaGGGCCTAAACATTTACTGC +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGQSIHM*GLNIYC
Trigger: GCAGTAAATGTTTAGGCCCCACATGTGAATGCTTTG...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCAGCTTTCATCCTATCCTaGTATAAAAGTCATACCGCT +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPAFILS*YKSHTA
Trigger: AGCGGTATGACTTTTATACCAGGATAGGATGAAAGC...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGATATGAACAACTAACGTaGAATCCTCCTAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGYEQLT*NPPNGR
Trigger: CCTTCCATTAGGAGGATTTCACGTTAGTTGTTCATA...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp ATTAGCACTGTCCATGACAGTAGCATAAGTCGGGCTGACTACAGCACATTGCCACTTAAAATGCATAAGTaGGAACTAACATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ISTVHDSSISRADYSTLPLKMHK*ELTSPA
Trigger: TGCTGGAGATGTTAGTTCTCACTTATGCATTTTAAG...TGGCAATGTGCTGTAGTCAGCCCGACTTATGCTACTGTCATGGACAGTGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTTCCTTGCGCCAGCGTaGTTTAGTCGTTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGFLAPA*FSRSNQ
Trigger: CTGGTTGGAACGACTAAAGCACGCTGGCGCAAGGAA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTTGGCCTTGAAGAAGTaGCTCAACCAACTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGLALKK*LNQLLA
Trigger: GGCGAGGAGTTGGTTGAGGCACTTCTTCAAGGCCAA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGACCTGTTAAGCAATGCTaGCAGTATACTTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGPVKQC*QYTSLC
Trigger: ACAAAGTGAAGTATACTGGCAGCATTGCTTAACAGG...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTGCTGCTGGCGACTCTaGATTTCAGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGCCWRL*ISAISA
Trigger: AGCTGAGATTGCTGAAATTCAGAGTCGCCAGCAGCA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR TCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTTGCTGCTGGCGACTCTaGATTTCAGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVCCWRL*ISAISA
Trigger: AGCTGAGATTGCTGAAATTCAGAGTCGCCAGCAGCA...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR TCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTCTATCCCAGACATGCTaGTTATGGTTGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGLSQTC*LWLAVL
Trigger: CAGCACAGCCAACCATAATCAGCATGTCTGGGATAG...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR TCA 90 bp TGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATTTCTGGAGCAGGGAGATGGAGCTATTAAGACCATGTaGGAGAAGCAACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: WLKLGVVSVLGFLEQGDGAIKTM*EKQLML
Trigger: TAACATAAGTTGCTTCTCTCACATGGTCTTAATAGC...TCCATCTCCCTGCTCCAGAAATCCTAGAACAGATACTACACCCAACTTTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR GCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTACTCGATTGCTGATCTaGACAGTTGGGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGTRLLI*TVGLST
Trigger: AGTGCTCAGCCCAACTGTGCAGATCAGCAATCGAGT...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR GCA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTACTCGATTGCTGATCTaGACAGTTGGGCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVTRLLI*TVGLST
Trigger: AGTGCTCAGCCCAACTGTGCAGATCAGCAATCGAGT...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTCTCTTTAGCTGCTTTTaGCTCAAGGACGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGLFSCF*LKDAVS
Trigger: AGAGACGGCGTCCTTGAGCCAAAAGCAGCTAAAGAG...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
3UTR CAA 72 bp CATGTGGGGCCTAAACATTTACTGCTTCTTGGTCTTTaGGCTAAAGTTGGGTGTAGTATCTGTTCTAGGATT +
Preference number: 4 (lower is better)
Translates to: HVGPKHLLLLGL*AKVGCSICSRI
Trigger: AATCCTAGAACAGATACTACACCCAACTTTAGCCAAAAGACCAAGAAGCAGTAAATGTTTAGGCCCCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR TCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTATGGTTGGCTGTGCTaGGTCCTCATTTACCGTATG +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGYGWLC*VLIYRM
Trigger: CATACGGTAAATGAGGACTCAGCACAGCCAACCATA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR TCA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTCCTCATTTACCGTATaGAATGCAAATGTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGSSFTV*NANVCQ
Trigger: TTGACAGACATTTGCATTTCATACGGTAAATGAGGA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS GCA 90 bp TACACCCCGGTGTGGTGCTGGCGAAGGTGGCTCGCGGGCATCTCCTaGAACGGCCTTGAGGATGGAAAGGGCTTTCCTCTCCACGCTCTG +
Preference number: 5 (lower is better)
Translates to: YTPVWCWRRWLAGIS*NGLEDGKGFPLHAL
Trigger: CAGAGCGTGGAGAGGAAAGCCCTTTCCATCCTCAAGGCCGTTGCAGGAGATGCCCGCGAGCCACCTTCGCCAGCACCACACCGGGGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR CAA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCGCCTGCTGCTCGGCCTaGGCTCGCTGCATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGACCSA*ARCIWS
Trigger: GCTCCAGATGCAGCGAGCCAAGGCCGAGCAGCAGGC...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CAA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCGCCTGCTGCTCGGCCTaGGCTCGCTGCATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPACCSA*ARCIWS
Trigger: GCTCCAGATGCAGCGAGCCAAGGCCGAGCAGCAGGC...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS CCA 90 bp CCTGCAACGGCCTTGAGGATGGAAAGGGCTTTCCTCTCCACGCTCTaGCCAGCCTGCGCCTCAGCTCCCGAAGTTGAGAGCTTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: PATALRMERAFLSTL*PACASAPEVESFPC
Trigger: GCAAGGAAAGCTCTCAACTTCGGGAGCTGAGGCGCAGGCTGGCCAGAGCGTGGAGAGGAAAGCCCTTTCCATCCTCAAGGCCGTTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS CCA 90 bp TCTCTGTTACCTATCCATTACACCCCGGTGTGGTGCTGGCGAAGGTaGCTCGCGGGCATCTCCTGCAACGGCCTTGAGGATGGAAAGGGC +
Preference number: 5 (lower is better)
Translates to: SLLPIHYTPVWCWRR*LAGISCNGLEDGKG
Trigger: GCCCTTTCCATCCTCAAGGCCGTTGCAGGAGATGCCCGCGAGCCACCTTCGCCAGCACCACACCGGGGTGTAATGGATAGGTAACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS TCA 90 bp TTTCCTCTCCACGCTCTGGCCAGCCTGCGCCTCAGCTCCCGAAGTTaGGAGCTTTCCTTGCGCCAGCGTGCTTTAGTCGTTCCAACCAGT +
Preference number: 5 (lower is better)
Translates to: FPLHALASLRLSSRS*ELSLRQRALVVPTS
Trigger: ACTGGTTGGAACGACTAAAGCACGCTGGCGCAAGGAAAGCTCTCAACTTCGGGAGCTGAGGCGCAGGCTGGCCAGAGCGTGGAGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR CAA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCCCTCAGCTCCCGAAGTaGAGAGCTTTCCTTGCGCCA +
Preference number: 5 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGPQLPK*RAFLAP
Trigger: TGGCGCAAGGAAAGCTCTCAACTTCGGGAGCTGAGG...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR CAA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTCTCCTGCAACGGCCTaGAGGATGGAAAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPSPATA*RMERAF
Trigger: GAAAGCCCTTTCCATCCTCAAGGCCGTTGCAGGAGA...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS-3UTR CAA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCAGGGATTCGCCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 5 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCQGFAM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGGCGAATCCCTG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CAA 90 bp GAGCTGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTGTTCCCCCTTGGCCTaGAAGAAGTGCCTCAACCAA +
Preference number: 5 (lower is better)
Translates to: ELLRQQTQPSPLGFANTGCSPLA*KKCLNQ
Trigger: TTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAACA...GCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CAA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCTGTTCCCCCTTGGCCTaGAAGAAGTGCCTCAACCAA +
Preference number: 5 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPCSPLA*KKCLNQ
Trigger: TTGGTTGAGGCACTTCTTCAAGGCCAAGGGGGAACA...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CAA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCACATACAGGACTCGATaGCTGATCTGCACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPTYRTR*LICTVG
Trigger: CCCAACTGTGCAGATCAGCAATCGAGTCCTGTATGT...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CAA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTAGATGGAACAGAAGCTaGCTTGGACCACTCCATGTA +
Preference number: 5 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCRWNRS*LGPLHV
Trigger: TACATGGAGTGGTCCAAGCAAGCTTCTGTTCCATCT...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CAA 90 bp TGCTCAGACAGCAGACCCAGCCCAGTCCACTGGGTTTTGCAAACACAGGCTCCCCTGCTGTCAAGTCTTTaGACTTCTTCTCTTTATGTT +
Preference number: 5 (lower is better)
Translates to: CSDSRPSPVHWVLQTQAPLLSSL*TSSLYV
Trigger: AACATAAAGAGAAGAAGTCAAAAGACTTGACAGCAG...GGGAGCCTGTGTTTGCAAAACCCAGTGGACTGGGCTGGGTCTGCTGTCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CAA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCTGCTGTCAAGTCTTTaGACTTCTTCTCTTTATGTT +
Preference number: 5 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCLLSSL*TSSLYV
Trigger: AACATAAAGAGAAGAAGTCAAAAGACTTGACAGCAG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CAA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTAACATTTACTGCTTCTaGGTCTTTTGGCTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCNIYCF*VFWLKL
Trigger: CAACTTTAGCCAAAAGACCAAGAAGCAGTAAATGTT...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CAA 90 bp CAGCAGAGCAGGAGTTCAGCCCCTAGCTGTTGCAAGGATGGGCAGCAGCTCTGTCTCCTGGCTAATTTTTaGTATTTTAGTACAGACAGG +
Preference number: 5 (lower is better)
Translates to: QQSRSSAPSCCKDGQQLCLLANF*YFSTDR
Trigger: CCTGTCTGTACTAAAATACAAAAAATTAGCCAGGAG...ACAGAGCTGCTGCCCATCCTTGCAACAGCTAGGGGCTGAACTCCTGCTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609094.2
CDS-3UTR CAA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTGCAGCAGCATGGGCTaGTGGAAGGGAGGCATGCCG +
Preference number: 5 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGCSSMG*WKGGMP
Trigger: CGGCATGCCTCCCTTCCACAAGCCCATGCTGCTGCA...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CAA 90 bp TGGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTGCCAGGCCAGTGGACTaGTGTGCAGTTCCCACCGGA +
Preference number: 5 (lower is better)
Translates to: WKLHFYSRPVYPRHADYGARPVD*CAVPTG
Trigger: TCCGGTGGGAACTGCACACAAGTCCACTGGCCTGGC...ACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS-3UTR CAA 90 bp GGAAACTTCATTTTTATTCTAGACCAGTCTATCCCAGACATGCTGATTATGGTTGCAAATGTCTGTCAATaGCAATGCCTGGGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: GNFIFILDQSIPDMLIMVANVCQ*QCLGPS
Trigger: GCTTGGCCCCAGGCATTGCAATTGACAGACATTTGC...AACCATAATCAGCATGTCTGGGATAGACTGGTCTAGAATAAAAATGAAGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000019317.8
ENST00000383432.8
CDS GCA 72 bp GTGTGGTGCTGGCGAAGGTGGCTCGCGGGCATCTCCTaGAACGGCCTTGAGGATGGAAAGGGCTTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: VWCWRRWLAGIS*NGLEDGKGFPL
Trigger: GAGAGGAAAGCCCTTTCCATCCTCAAGGCCGTTGCAGGAGATGCCCGCGAGCCACCTTCGCCAGCACCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS CCA 72 bp CCTATCCATTACACCCCGGTGTGGTGCTGGCGAAGGTaGCTCGCGGGCATCTCCTGCAACGGCCTTGAGGAT +
Preference number: 6 (lower is better)
Translates to: PIHYTPVWCWRR*LAGISCNGLED
Trigger: ATCCTCAAGGCCGTTGCAGGAGATGCCCGCGAGCCACCTTCGCCAGCACCACACCGGGGTGTAATGGATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS CCA 72 bp TCTCTGTTACCTATCCATTACACCCCGGTGTGGTGCTaGCGAAGGTGGCTCGCGGGCATCTCCTGCAACGGC +
Preference number: 6 (lower is better)
Translates to: SLLPIHYTPVWC*RRWLAGISCNG
Trigger: GCCGTTGCAGGAGATGCCCGCGAGCCACCTTCGCCAGCACCACACCGGGGTGTAATGGATAGGTAACAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS CAA 90 bp CTTTCCTCTCCACGCTCTGGCCAGCCTGCGCCTCAGCTCCCGAAGTaGAGAGCTTTCCTTGCGCCAGCGTGCTTTAGTCGTTCCAACCAG +
Preference number: 6 (lower is better)
Translates to: LSSPRSGQPAPQLPK*RAFLAPACFSRSNQ
Trigger: CTGGTTGGAACGACTAAAGCACGCTGGCGCAAGGAAAGCTCTCAACTTCGGGAGCTGAGGCGCAGGCTGGCCAGAGCGTGGAGAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000019317.8
CDS TCA 72 bp CAACTTCAGATCTGTCTGTCCATTCCCACTGAAACCTaGAGGAAGGATCGCAGCACCCAAAGGCGCCCACTG +
Preference number: 6 (lower is better)
Translates to: QLQICLSIPTET*RKDRSTQRRPL
Trigger: CAGTGGGCGCCTTTGGGTGCTGCGATCCTTCCTTCAGGTTTCAGTGGGAATGGACAGACAGATCTGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458039.3
ENST00000577221.1