RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132155

Ensembl transcript IDs: ENST00000251849.9, ENST00000416093.1, ENST00000423275.5, ENST00000432427.2, ENST00000442415.7, ENST00000460610.1, ENST00000465826.5, ENST00000475353.1, ENST00000491290.1, ENST00000492690.1, ENST00000494557.1

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGGGACGTGGTCAGCGTGCAAGCATTGATATCCTCAGTGTGGGCTaGCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGG +
Preference number: 1 (lower is better)
Translates to: RGRGQRASIDILSVG*PMQGWLGSAPVDLR
Trigger: CCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACCACGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR CCA 90 bp AGCCTCGGGGACGTGGTCAGCGTGCAAGCATTGATATCCTCAGTGTaGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATC +
Preference number: 1 (lower is better)
Translates to: SLGDVVSVQALISSV*AARCKDGSEALRLI
Trigger: GATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACCACGTCCCCGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR GCA 90 bp GGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTaGAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCCGCC +
Preference number: 1 (lower is better)
Translates to: GRPESRQSWAVWCLM*KMSGAAPLSEESPA
Trigger: GGCGGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CCA 90 bp GCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTaGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAA +
Preference number: 1 (lower is better)
Translates to: AGSFGRPESRQSWAV*CLMCKMSGAAPLSE
Trigger: TTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CCA 90 bp GCACGGGGGTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTGAAGGTGAGGCTGATTCGCTGTGAC +
Preference number: 1 (lower is better)
Translates to: ARGFSAVTSLLGSDC*GYWTGLKVRLIRCD
Trigger: GTCACAGCGAATCAGCCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR TCA 90 bp ACTAGAAGACAGGCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATTaGTATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAG +
Preference number: 1 (lower is better)
Translates to: TRRQAASGTWSACKH*YPQCGLPDARMARK
Trigger: CTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACCACGTCCCCGAGGCTGCCTGTCTTCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR CCA 90 bp AGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTaGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCA +
Preference number: 1 (lower is better)
Translates to: STKAGSFGRPESRQS*AVWCLMCKMSGAAP
Trigger: TGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR GCA 90 bp GTGGTCAGCGTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGATaGAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAG +
Preference number: 1 (lower is better)
Translates to: VVSVQALISSVWAAR*KDGSEALRLIFGRE
Trigger: CTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR GCA 90 bp AGACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTaGCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTG +
Preference number: 1 (lower is better)
Translates to: RLLPERAEMRIGRVP*LENHPNALDTLEAV
Trigger: CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CCA 90 bp GTGCTGACCATGTGGACATTAGGTGTGGATGTCGACCTCTGCCTCTaGGAGAGGGAACCTTCAGATGAGGGACTGGAGGTGTTAAAGGTG +
Preference number: 1 (lower is better)
Translates to: VLTMWTLGVDVDLCL*EREPSDEGLEVLKV
Trigger: CACCTTTAACACCTCCAGTCCCTCATCTGAAGGTTCCCTCTCCCAGAGGCAGAGGTCGACATCCACACCTAATGTCCACATGGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
3UTR CCA 90 bp TTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTGGGGCTACTaGACAGGGCTGAAGGTGAGGCTGATTCGCTGTGACTTCGAATTG +
Preference number: 1 (lower is better)
Translates to: FSAVTSLLGSDCWGY*TGLKVRLIRCDFEL
Trigger: CAATTCGAAGTCACAGCGAATCAGCCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR GCA 90 bp ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATaGGGATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCAC +
Preference number: 1 (lower is better)
Translates to: TKFSMMEDCSLRGLR*GLAECLAWKTIPMH
Trigger: GTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CCA 90 bp TTCCAAAAGAGCCTGACCCAATCCGAGTGGACAGCATCACTTCACTaGCTTCTATTTCCCAATAATAGCTTGAATCTCTCTGTCCACGAG +
Preference number: 1 (lower is better)
Translates to: FQKSLTQSEWTASLH*LLFPNNSLNLSVHE
Trigger: CTCGTGGACAGAGAGATTCAAGCTATTATTGGGAAATAGAAGCCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAGGCTCTTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR TCA 90 bp AACATCTCCGTGCCATTTACCCTTATAAACAGTTCCAAAAGAGCCTaGCCCAATCCGAGTGGACAGCATCACTTCACTGGCTTCTATTTC +
Preference number: 1 (lower is better)
Translates to: NISVPFTLINSSKRA*PNPSGQHHFTGFYF
Trigger: GAAATAGAAGCCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAGGCTCTTTTGGAACTGTTTATAAGGGTAAATGGCACGGAGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR TCA 90 bp AGTGGACAGCATCACTTCACTGGCTTCTATTTCCCAATAATAGCTTaGATCTCTCTGTCCACGAGGCCTAATTTTGTTTTTCTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: SGQHHFTGFYFPIIA*ISLSTRPNFVFLLG
Trigger: ACCCAGGAGAAAAACAAAATTAGGCCTCGTGGACAGAGAGATTCAAGCTATTATTGGGAAATAGAAGCCAGTGAAGTGATGCTGTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp GGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGAGAAAGTCCCGCCTGTaGCATGCATTCCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: GSFGRPESRQSWAVWCLMRKSRL*HAFLQK
Trigger: CTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCT...CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTTCTCCACATCAGGGCTaGACTGCCTGCTACCTTACT +
Preference number: 2 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGSPHQG*TACYLT
Trigger: AGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGA...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTGGCCTGGAATTGCTCTaGGGTTGGGTCGACAACCTT +
Preference number: 2 (lower is better)
Translates to: VWAARCKDGSEALRLIFGGLELL*GWVDNL
Trigger: AAGGTTGTCGACCCAACCCCAGAGCAATTCCAGGCC...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR GCA 90 bp TTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGAGGACACACCAGCACTaGAAATGGCTTCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: FHSTKAGSFGRPESRQSWRTHQH*KWLPSP
Trigger: GGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCT...CCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR GCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAAACATCAGGGCTGGACTaGCTGCTACCTTACTTCCTC +
Preference number: 2 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKTSGLD*LLPYFL
Trigger: GAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGATGT...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CAA 90 bp TTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATaGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACA +
Preference number: 2 (lower is better)
Translates to: FSMMEDCSLRGLRCG*AECLAWKTIPMHWT
Trigger: TGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR TCA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTTTCCCAATAATAGCTTaGATCTCTCTGTCCACGAGG +
Preference number: 2 (lower is better)
Translates to: VWAARCKDGSEALRLIFGFPIIA*ISLSTR
Trigger: CCTCGTGGACAGAGAGATTCAAGCTATTATTGGGAA...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp TGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGTTCCAAAAGAGCCTaGCCCAATCCGAGTGGACAG +
Preference number: 2 (lower is better)
Translates to: CKDGSEALRLIFGRECWSSSKRA*PNPSGQ
Trigger: CTGTCCACTCGGATTGGGTCAGGCTCTTTTGGAACT...GCTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp GCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGGGTTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC +
Preference number: 2 (lower is better)
Translates to: ALRLIFGRECWSSSMEDRGCSTC*EPLQRD
Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAACC...CCTGTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAAGATCAACCGGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR CCA 90 bp TGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCCTGACCCAATCCGAGTaGACAGCATCACTTCACTGG +
Preference number: 2 (lower is better)
Translates to: CKDGSEALRLIFGRECWSLTQSE*TASLHW
Trigger: CCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAG...GCTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp GCTGGCACGGGGGTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTGGGGGACATCGAAATCCATTaGGCAGGAATTTCTGACAGA +
Preference number: 2 (lower is better)
Translates to: AGTGVFGCDQPVGLRLLGDIEIH*AGISDR
Trigger: TCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTC...CCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCCGTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp TCCTGGGTCCCAGATACTGGTGCCCGCTCTCTTTGTGCTGGCACGGGGGTTTTCGTAGAATATCTGTGCTaGGAACTAACAGGCATCCTG +
Preference number: 2 (lower is better)
Translates to: SWVPDTGARSLCAGTGVFVEYLC*ELTGIL
Trigger: CAGGATGCCTGTTAGTTCTCAGCACAGATATTCTAC...GAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAACATTCCTCCAGAAGCTaGTTTCCAAAATCCCATGTG +
Preference number: 2 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKHSSRS*FPKSHV
Trigger: CACATGGGATTTTGGAAATCAGCTTCTGGAGGAATG...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR TCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAGAAAGTCCCGCCTGTaGCATGCATTCCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: RVPCLENHPNALDTLEAVRKSRL*HAFLQK
Trigger: CTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCT...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR GCA 90 bp TTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTTACTTCAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: FQNPMCLHIRAGLPATLLQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...AAGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR GCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCACAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
3UTR-3UTR GCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACACAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
3UTR-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
3UTR-3UTR GCA 90 bp TCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGGAGCAGAAAAGTGGTaGCTGCTGGCTTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: SPRAQRDRKEGNMKLRPCGAEKW*LLASPP
Trigger: AGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCC...ACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
3UTR-3UTR GCA 90 bp GCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCCCATCAACATCCACTTaGGCATCTACAGAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: ADFQNPMCLHIRAGLPATPSTST*ASTEGW
Trigger: CCAGCCTTCTGTAGATGCGCAAGTGGATGTTGATGG...GGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAGAGGGCTGAGATaGGGATTGGCCGAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASLRGLR*GLAECL
Trigger: AAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAG...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTAAAAGTGGTGCCTGCTaGCTTCTCCTCCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASKSGAC*LLLLPW
Trigger: CCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTT...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
3UTR-3UTR CCA 90 bp TCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAAAAGTGGTGCCTGCTaGCTTCTCCTCCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: SLKKVPPVTCIPPEADFQKSGAC*LLLLPW
Trigger: CCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTT...TTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGAAGGGAGCAGAAAAGTaGTGCCTGCTGGCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCEKGAEK*CLLASP
Trigger: AGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTT...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
3UTR-3UTR CCA 90 bp GTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGAGTCTCGGCAGTCCTaGGCTGTTTGGTGCCTTATG +
Preference number: 2 (lower is better)
Translates to: VPCLENHPNALDTLEAVKESRQS*AVWCLM
Trigger: CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTC...TTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp CTGGGGTTGGGTCGACAACCTTTAGGATCTTTACTGCAACATCTCCGTGCCATTGATTGTTGGGGCTACTaGACAGGGCTGAAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LGLGRQPLGSLLQHLRAIDCWGY*TGLKVR
Trigger: CCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATC...AATGGCACGGAGATGTTGCAGTAAAGATCCTAAAGGTTGTCGACCCAACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR CCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGCCGAGTGCCTTGCCTaGAAAACCATCCCAATGCAC +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASAECLA*KTIPMH
Trigger: GTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp GCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGCGACTGGAAACTGAATaGGTTGTTATCCTGCATTCG +
Preference number: 2 (lower is better)
Translates to: ALRLIFGRECWSSSMEDRRLETE*VVILHS
Trigger: CGAATGCAGGATAACAACCCATTCAGTTTCCAGTCG...CCTGTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAAGATCAACCGGAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGCATTCCTCCAGAAGCTaGTTTCCAAAATCCCATGTG +
Preference number: 2 (lower is better)
Translates to: RVPCLENHPNALDTLEAVHSSRS*FPKSHV
Trigger: CACATGGGATTTTGGAAATCAGCTTCTGGAGGAATG...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTAAGGGAGCAGAAAAGTaGTGCCTGCTGGCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESKGAEK*CLLASP
Trigger: AGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTT...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CCA 90 bp GGTAGTGCTGGGACTCCACTATCACCAATAGTGGAATTTGGAAACAATAAGAGTAAAAGTGGTGCCTGCTaGCTTCTCCTCCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: GSAGTPLSPIVEFGNNKSKSGAC*LLLLPW
Trigger: CCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTT...ACTCTTATTGTTTCCAAATTCCACTATTGGTGATAGTGGAGTCCCAGCACTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGTTTGGTGCCTTATGTaGAAAATGTCTGGCGCTGCA +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASVWCLM*KMSGAA
Trigger: TGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTAGCAGAATGTTCACATaGCGTGTTTTGCGCAGAACA +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASSRMFT*RVLRRT
Trigger: TGTTCTGCGCAAAACACGGCATGTGAACATTCTGCT...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTACAATAAGAGTTGTCTaGTGTTACTCCAGTCCACAC +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASTIRVV*CYSSPH
Trigger: GTGTGGACTGGAGTAACATCAGACAACTCTTATTGT...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGTTCATACAATACGATaGCATAGGAGTAGACATCCG +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASVHTIR*HRSRHP
Trigger: CGGATGTCTACTCCTATGGCATCGTATTGTATGAAC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp AAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTTTGAGCAGGAATTTCTaGCAGATGTCACAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: KELSDVTPVHTHSRYFGALSRNF*QMSQKA
Trigger: TGCCTTCTGTGACATCTGTCAGAAATTCCTGCTCAA...AGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416093.1
3UTR-3UTR TCA 90 bp GTGCTGAGAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACGACATCGAAATCCATTaGGCAGGAATTTCTGACAGA +
Preference number: 2 (lower is better)
Translates to: VLRKELSDVTPVHTHSRYDIEIH*AGISDR
Trigger: TCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTC...GTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTCTCAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416093.1
3UTR-3UTR TCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTTCATGTCTCTATGGATaGTGTTCTTTGCATGCAAAT +
Preference number: 2 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASSCLYG*CSLHAN
Trigger: ATTTGCATGCAAAGAACATCATCCATAGAGACATGA...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR TCA 90 bp TCTGTGCTGAGAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTCCAGGAAATCTACTTaGAGTTCTTCTCCAATCAAA +
Preference number: 2 (lower is better)
Translates to: SVLRKELSDVTPVHTHSRSRKST*SSSPIK
Trigger: TTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGA...CCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTCTCAGCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416093.1
3UTR CAA 90 bp AAATTAAAACCCAAATCATCAAGAAAACCTGTATTCCTGGCTTCCTaGTATACACATGATGTGACTAGAGAAACAAGGCTGTTTGTTTGT +
Preference number: 2 (lower is better)
Translates to: KLKPKSSRKPVFLAS*YTHDVTRETRLFVC
Trigger: ACAAACAAACAGCCTTGTTTCTCTAGTCACATCATGTGTATACAAGGAAGCCAGGAATACAGGTTTTCTTGATGATTTGGGTTTTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR TCA 72 bp CAGGCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATTaGTATCCTCAGTGTGGGCTGCCCGATGCAAGGATG +
Preference number: 3 (lower is better)
Translates to: QAASGTWSACKH*YPQCGLPDARM
Trigger: CATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACCACGTCCCCGAGGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR CCA 72 bp GCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTaGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGC +
Preference number: 3 (lower is better)
Translates to: AGSFGRPESRQS*AVWCLMCKMSG
Trigger: GCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR GCA 72 bp GGTCAGCGTGCAAGCATTGATATCCTCAGTGTGGGCTaGCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT +
Preference number: 3 (lower is better)
Translates to: GQRASIDILSVG*PMQGWLGSAPV
Trigger: AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR CCA 72 bp TTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTaGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCA +
Preference number: 3 (lower is better)
Translates to: FGRPESRQSWAV*CLMCKMSGAAP
Trigger: TGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CCA 72 bp GACGTGGTCAGCGTGCAAGCATTGATATCCTCAGTGTaGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTC +
Preference number: 3 (lower is better)
Translates to: DVVSVQALISSV*AARCKDGSEAL
Trigger: GAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR GCA 72 bp TGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTaGCTTGCCTGGAAAACCATCCCAATGCACTGGACA +
Preference number: 3 (lower is better)
Translates to: CSLRGLRCGLAE*LAWKTIPMHWT
Trigger: TGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR GCA 72 bp CCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTaGCTGGAAAACCATCCCAATGCACTGGACACCTTA +
Preference number: 3 (lower is better)
Translates to: PERAEMRIGRVP*LENHPNALDTL
Trigger: TAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR GCA 72 bp GTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGATaGAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTC +
Preference number: 3 (lower is better)
Translates to: VQALISSVWAAR*KDGSEALRLIF
Trigger: GAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR CCA 72 bp TTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTGAAGGTGAGGCTGATT +
Preference number: 3 (lower is better)
Translates to: FSAVTSLLGSDC*GYWTGLKVRLI
Trigger: AATCAGCCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR GCA 72 bp GAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTaGAAAATGTCTGGCGCTGCACCACTCTCTGAAGAA +
Preference number: 3 (lower is better)
Translates to: ESRQSWAVWCLM*KMSGAAPLSEE
Trigger: TTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR GCA 72 bp GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATaGACTGGACACCTTAGAAGCTGTGAAAGGAGGACG +
Preference number: 3 (lower is better)
Translates to: DWPSALPGKPSQ*TGHLRSCERRT
Trigger: CGTCCTCCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CAA 90 bp CCTGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGACCATCAACATCCACTaGCGCATCTACAGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: PGLFGALCAKCLALHHSLTINIH*RIYRRL
Trigger: CAGCCTTCTGTAGATGCGCAAGTGGATGTTGATGGT...CAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CAA 90 bp GCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGGTCACAATTGCCAGGTaGTCCTTTGTCATGTACCCC +
Preference number: 3 (lower is better)
Translates to: ALRLIFGRECWSSSMEDRVTIAR*SFVMYP
Trigger: GGGGTACATGACAAAGGACAACCTGGCAATTGTGAC...CCTGTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAAGATCAACCGGAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR CAA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTCTGGGCCCCTGCTTTTaGTACTACCATCAACATCCA +
Preference number: 3 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCLGPCF*YYHQHP
Trigger: TGGATGTTGATGGTAGTACAAAAAGCAGGGGCCCAG...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR-3UTR CAA 90 bp ATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGTTTCCCAATAATAGCTaGAATCTCTCTGTCCACGAG +
Preference number: 3 (lower is better)
Translates to: IDILSVGCPMQGWLGSAPFPNNS*NLSVHE
Trigger: CTCGTGGACAGAGAGATTCAAGCTATTATTGGGAAA...CGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR CCA 72 bp TCTCTCTGTCCACGAGGCCTAATTTTGTTTTTCTCCTaGGTCCCAGATACTGGTGCCCGCTCTCTTTGTGCT +
Preference number: 3 (lower is better)
Translates to: SLCPRGLILFFS*VPDTGARSLCA
Trigger: AGCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAGGAGAAAAACAAAATTAGGCCTCGTGGACAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR CAA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGTCAGCGTGCAAGCATaGATATCCTCAGTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASVSVQA*ISSVWA
Trigger: AGCCCACACTGAGGATATCAATGCTTGCACGCTGAC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR CAA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACCTGGGCCCCTGCTTTTaGTACTACCATCAACATCCA +
Preference number: 3 (lower is better)
Translates to: IRAGLPATLLPLNTHVANLGPCF*YYHQHP
Trigger: TGGATGTTGATGGTAGTACAAAAAGCAGGGGCCCAG...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR TCA 72 bp GTGCCATTTACCCTTATAAACAGTTCCAAAAGAGCCTaGCCCAATCCGAGTGGACAGCATCACTTCACTGGC +
Preference number: 3 (lower is better)
Translates to: VPFTLINSSKRA*PNPSGQHHFTG
Trigger: GCCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAGGCTCTTTTGGAACTGTTTATAAGGGTAAATGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
3UTR-3UTR CAA 90 bp TCTGTGCTGAGAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGGTCTTCCGAGCAAAGTaGTGTGTTGTGAGGGGAACA +
Preference number: 3 (lower is better)
Translates to: SVLRKELSDVTPVHTHSRVFRAK*CVVRGT
Trigger: TGTTCCCCTCACAACACACAACTTTGCTCGGAAGAC...CCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTCTCAGCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416093.1
3UTR-3UTR CAA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACAGTCTTCCGAGCAAAGTaGTGTGTTGTGAGGGGAACA +
Preference number: 3 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTVFRAK*CVVRGT
Trigger: TGTTCCCCTCACAACACACAACTTTGCTCGGAAGAC...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
3UTR GCA 72 bp AAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTaGTACCTTACTTCCTCTAAATACTCATGTAGCCAA +
Preference number: 3 (lower is better)
Translates to: KSHVSPHQGWTA*YLTSSKYSCSQ
Trigger: TTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CCA 72 bp AGCCTGACCCAATCCGAGTGGACAGCATCACTTCACTaGCTTCTATTTCCCAATAATAGCTTGAATCTCTCT +
Preference number: 3 (lower is better)
Translates to: SLTQSEWTASLH*LLFPNNSLNLS
Trigger: AGAGAGATTCAAGCTATTATTGGGAAATAGAAGCCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp GGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGGGGGGTTTTCGGCTGTaGCCAGCCTGTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSFGRPESRQSWAVWCLMGGFRL*PACWAQ
Trigger: CTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCC...CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GCTGGCACGGGGGTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTGGGGTCCCGCCATCTAAGATaGCGGCCCAAGCGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: AGTGVFGCDQPVGLRLLGSRHLR*RPKRPR
Trigger: TCGCGGGCGCTTGGGCCGCCATCTTAGATGGCGGGA...CCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCCGTGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp GGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGGGTGTTTGTAGAGGCTaGTGCCCTCGCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: GSFGRPESRQSWAVWCLMGVCRG*CPRTTG
Trigger: CCCAGTGGTGCGAGGGCAGCAGCCTCTACAAACACC...CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAACAAAGCCCGGCCAGCTaGCCCTTTTCGGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPEQSPAS*PFSGPK
Trigger: TTTGGGCCCCGAAAAGGGTCAGCTGGCCGGGCTTTG...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR GCA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGGTCCCAGATACTGGTaGCCGCTCTCTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGGPRYW*PLSLCW
Trigger: CCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACC...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTGGTGTTTGTAGAGGCTaGTGCCCTCGCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: VWAARCKDGSEALRLIFGGVCRG*CPRTTG
Trigger: CCCAGTGGTGCGAGGGCAGCAGCCTCTACAAACACC...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCGTGTGGGCTGCCCGATaGAAGGATGGCTCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAAVWAAR*KDGSEA
Trigger: CGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GCTGGCACGGGGGTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTGGGGGAGTTTGCCATCATCTaGTGCCCGGCGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: AGTGVFGCDQPVGLRLLGEFAII*CPALIA
Trigger: GGCTATCAGCGCCGGGCATCAGATGATGGCAAACTC...CCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCCGTGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCGGTGTTTGTAGAGGCTaGTGCCCTCGCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAAGVCRG*CPRTTG
Trigger: CCCAGTGGTGCGAGGGCAGCAGCCTCTACAAACACC...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTCAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VWAARCKDGSEALRLIFGQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp GGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGCATTCGGATCACCTCTaGGGCCATCCAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GSFGRPESRQSWAVWCLMHSDHL*GHPEDR
Trigger: TCTGTCCTCTGGATGGCCCCAGAGGTGATCCGAATG...CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAATGCCCGATGCAAGGATaGCTCGGAAGCGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKCPMQG*LGSAPV
Trigger: AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCA...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAAAAGTGGTGCCTGCTaGCTTCTCCTCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VWAARCKDGSEALRLIFGKSGAC*LLLLPW
Trigger: CCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTT...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp ACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGGCCGAGTGCCTTGCCTaGAAAACCATCCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: TKAGSFGRPESRQSWAVWAECLA*KTIPMH
Trigger: GTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGC...CCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CAA 72 bp CTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTaGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LRAARVSAVLGC*VPYVQNVWRCT
Trigger: GGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp TCCTGGGTCCCAGATACTGGTGCCCGCTCTCTTTGTGCTGGCACGGGGGTTTTCGGTCCCAGATACTGGTaGCCGCTCTCTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SWVPDTGARSLCAGTGVFGPRYW*PLSLCW
Trigger: CCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACC...GAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp TCCTGGGTCCCAGATACTGGTGCCCGCTCTCTTTGTGCTGGCACGGGGGTTTTCATCCTCAGTGTGGGCTaGCCGATGCAAGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SWVPDTGARSLCAGTGVFILSVG*PMQGWL
Trigger: GAGCCATCCTTGCATCGGGCAGCCCACACTGAGGAT...GAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAACAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPEQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAACTGAGAGGGCTGAGATaGGGATTGGCCGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKLRGLR*GLAECL
Trigger: AAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAG...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GCTGGCACGGGGGTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTGGGGTTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGTGVFGCDQPVGLRLLGLGSDC*GYWTGL
Trigger: CAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAA...CCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCCGTGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAACTGGGTCCCAGATACTaGTGCCCGCTCTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKLGPRY*CPLSLC
Trigger: GCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAG...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAACTGGGTCCCAGATACTaGTGCCCGCTCTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPELGPRY*CPLSLC
Trigger: GCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAG...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCCTGCCCTCGCACCACTaGGTCACAATTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAALPSHH*VTIARL
Trigger: CAACCTGGCAATTGTGACCCAGTGGTGCGAGGGCAG...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGAAGGGAGCAGAAAAGTaGTGCCTGCTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSFGRPESRQSWAVWCLMKGAEK*CLLASP
Trigger: AGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTT...CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCATCTACAGAAGGCTaGGCCTTGAGCATGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGASTEG*ALSMGN
Trigger: ATTCCCCATGCTCAAGGCCCAGCCTTCTGTAGATGC...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CAA 72 bp ACAGGCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATaGATATCCTCAGTGTGGGCTGCCCGATGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: TGSLGDVVSVQA*ISSVWAARCKD
Trigger: ATCCTTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTGACCACGTCCCCGAGGCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCGGGGGTTTTCGGCTGTaGCCAGCCTGTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGGGFRL*PACWAQ
Trigger: CTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCC...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGGTTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPGCSTC*EPLQRD
Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAACC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGTCAGCGTGCAAGCATTaGTATCCTCAGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLSACKH*YPQCGL
Trigger: CAGCCCACACTGAGGATATCAATGCTTGCACGCTGA...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp TGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCTGCCCGCTCTCTTTGTaGTGGCACGGGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: CKDGSEALRLIFGRECWSCPLSL*WHGGFR
Trigger: CCGAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCA...GCTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp ACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTCACATGCCGTGTTTTaGGCAGAACAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: TKAGSFGRPESRQSWAVWSHAVF*AEQPPH
Trigger: ATGAGGTGGCTGTTCTGCGCAAAACACGGCATGTGA...CCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAAGTTTGTAGAGGCTGCTaGCCTCGCACCACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKVCRGC*PRTTGS
Trigger: TGACCCAGTGGTGCGAGGGCAGCAGCCTCTACAAAC...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAAATCCTCAGTGTGGGCTaGCCGATGCAAGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKILSVG*PMQGWL
Trigger: GAGCCATCCTTGCATCGGGCAGCCCACACTGAGGAT...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCGGAGCAGAAAAGTGGTaGCTGCTGGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAAGAEKW*LLASPP
Trigger: AGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCC...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGTCGACCTCTGCCTCTaGGAGAGGGAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPVDLCL*EREPSD
Trigger: ATCTGAAGGTTCCCTCTCCCAGAGGCAGAGGTCGAC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAATTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPELGSDC*GYWTGL
Trigger: CAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAA...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp TTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGTTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FHSTKAGSFGRPESRQSWLGSDC*GYWTGL
Trigger: CAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAA...CCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGCTGACCCAATCCGAGTaGACAGCATCACTTCACTGG +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLLTQSE*TASLHW
Trigger: CCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAG...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAAAAAAGTGGTGCCTGCTaGCTTCTCCTCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKKSGAC*LLLLPW
Trigger: CCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTT...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGTCTCCACATCAGGGCTaGACTGCCTGCTACCTTACT +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLSPHQG*TACYLT
Trigger: AGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGA...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGCAAAGCCCGGCCAGCTaGCCCTTTTCGGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RVPCLENHPNALDTLEAVQSPAS*PFSGPK
Trigger: TTTGGGCCCCGAAAAGGGTCAGCTGGCCGGGCTTTG...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTATCCAAAACCATTGCTaGTCGTCTTCCAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGIQNHC*SSSKLP
Trigger: AGGGAGCTTGGAAGACGATCAGCAATGGTTTTGGAT...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCAGTTCCAAAAGAGCCTaGCCCAATCCGAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAASSKRA*PNPSGQ
Trigger: CTGTCCACTCGGATTGGGTCAGGCTCTTTTGGAACT...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAAGTTCCAAAAGAGCCTaGCCCAATCCGAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPESSKRA*PNPSGQ
Trigger: CTGTCCACTCGGATTGGGTCAGGCTCTTTTGGAACT...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAAAGTTCCAAAAGAGCCTaGCCCAATCCGAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKSSKRA*PNPSGQ
Trigger: CTGTCCACTCGGATTGGGTCAGGCTCTTTTGGAACT...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAACGGAAGCGCTCCGGTTaGTCTTCGGTAGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKRKRSG*SSVESV
Trigger: AACACTCTCTACCGAAGATCAACCGGAGCGCTTCCG...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCTGCCCGCTCTCTTTGTaGTGGCACGGGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGCPLSL*WHGGFR
Trigger: CCGAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCA...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCGTGTGGGCTGCCCGATaGAAGGATGGCTCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: ADFQNPMCLHIRAGLPATVWAAR*KDGSEA
Trigger: CGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC...GGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGATCCTCAGTGTGGGCTaGCCGATGCAAGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: NVGREQDTPALQMASFSQILSVG*PMQGWL
Trigger: GAGCCATCCTTGCATCGGGCAGCCCACACTGAGGAT...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp ATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGGAGCAGAAAAGTGGTaGCTGCTGGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IDILSVGCPMQGWLGSAPGAEKW*LLASPP
Trigger: AGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCC...CGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAACATCAGGGCTGGACTaGCTGCTACCTTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPETSGLD*LLPYFL
Trigger: GAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGATGT...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCACATCAGGGCTGGACTaGCTGCTACCTTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAATSGLD*LLPYFL
Trigger: GAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGATGT...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAATTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKLGSDC*GYWTGL
Trigger: CAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAA...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAAGGCCTGGAATTGCTCTaGGGTTGGGTCGACAACCTT +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKGLELL*GWVDNL
Trigger: AAGGTTGTCGACCCAACCCCAGAGCAATTCCAGGCC...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTCATTCCTGAAGGCCTaGAATTGCTCTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAASFLKA*NCSGVG
Trigger: CCCAACCCCAGAGCAATTCCAGGCCTTCAGGAATGA...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGCTGCCCTCGCACCACTaGGTCACAATTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NVGREQDTPALQMASFSQLPSHH*VTIARL
Trigger: CAACCTGGCAATTGTGACCCAGTGGTGCGAGGGCAG...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTTTCGGTAGAGAGTGTTaGAGCAGCTCAATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGFGREC*SSSMED
Trigger: GTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAA...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCAAGGGAGCAGAAAAGTaGTGCCTGCTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAAKGAEK*CLLASP
Trigger: AGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTT...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTAAGGGAGCAGAAAAGTaGTGCCTGCTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPKGAEK*CLLASP
Trigger: AGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTT...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCGCATCTACAGAAGGCTaGGCCTTGAGCATGGGGAAT +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAAASTEG*ALSMGN
Trigger: ATTCCCCATGCTCAAGGCCCAGCCTTCTGTAGATGC...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAGGGAACCTTCAGATaGGGGACTGGAGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPEGTFR*GTGGVK
Trigger: TTTAACACCTCCAGTCCCTCATCTGAAGGTTCCCTC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAAAGAACCACTCCAGCGTaGCTTTACTGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKRTTPA*LYCCQT
Trigger: GGTTTGGCAACAGTAAAGTCACGCTGGAGTGGTTCT...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp TGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCGGTTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: CKDGSEALRLIFGRECWSGCSTC*EPLQRD
Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAACC...GCTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCGCACAGCACTCTGGTTaGAGGCCCCTCACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGAQHSG*RPLTLS
Trigger: ACTCAAGGTGAGGGGCCTGCAACCAGAGTGCTGTGC...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAGAAGTCTGAACACTaGACAGCACTCTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPEKSEH*TALWLQ
Trigger: CTGCAACCAGAGTGCTGTGCAGTGTTCAGACTTCTC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTTGCCCGCTCTCTTTGTaGTGGCACGGGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCCPLSL*WHGGFR
Trigger: CCGAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCA...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCATCCTCAGTGTGGGCTaGCCGATGCAAGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGILSVG*PMQGWL
Trigger: GAGCCATCCTTGCATCGGGCAGCCCACACTGAGGAT...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTATTGGCCGAGTGCCTTaGCTGGAAAACCATCCCAAT +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPIGRVP*LENHPN
Trigger: ATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAAT...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAATTGGCCGAGTGCCTTaGCTGGAAAACCATCCCAAT +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPEIGRVP*LENHPN
Trigger: ATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAAT...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp CAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAGTCCCGCCATCTAAGATaGCGGCCCAAGCGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: QGWTACYLTSSKYSCSQQSRHLR*RPKRPR
Trigger: TCGCGGGCGCTTGGGCCGCCATCTTAGATGGCGGGA...CTGTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCGTCTGGACCACGCCCTaGGAGAAGCACTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGVWTTP*EKHSGC
Trigger: ACAACCTGAGTGCTTCTCCCAGGGCGTGGTCCAGAC...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442415.7
3UTR CAA 72 bp GTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTaGGGGCTACTGGACAGGGCTGAAGGTGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VFGCDQPVGLRL*GLLDRAEGEAD
Trigger: ATCAGCCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGCAAAGCCCGGCCAGCTaGCCCTTTTCGGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSQSPAS*PFSGPK
Trigger: TTTGGGCCCCGAAAAGGGTCAGCTGGCCGGGCTTTG...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTATCCAAAACCATTGCTaGTCGTCTTCCAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPIQNHC*SSSKLP
Trigger: AGGGAGCTTGGAAGACGATCAGCAATGGTTTTGGAT...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR TCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAATCCAAAACCATTGCTaGTCGTCTTCCAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPEIQNHC*SSSKLP
Trigger: AGGGAGCTTGGAAGACGATCAGCAATGGTTTTGGAT...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR TCA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGTCAGCGTGCAAGCATTaGTATCCTCAGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NVGREQDTPALQMASFSQSACKH*YPQCGL
Trigger: CAGCCCACACTGAGGATATCAATGCTTGCACGCTGA...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGCATTCCTCCAGAAGCTaGTTTCCAAAATCCCATGTG +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLHSSRS*FPKSHV
Trigger: CACATGGGATTTTGGAAATCAGCTTCTGGAGGAATG...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGCACAGCACTCTGGTTaGAGGCCCCTCACCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCAQHSG*RPLTLS
Trigger: ACTCAAGGTGAGGGGCCTGCAACCAGAGTGCTGTGC...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGTGCCCGCTCTCTTTGTaGTGGCACGGGGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCECPLSL*WHGGFR
Trigger: CCGAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCA...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCTGAAGGCCTGGAATTaGTCTGGGGTTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGLKAWN*SGVGST
Trigger: TGTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAG...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGTTTGTAGAGGCTGCTaGCCTCGCACCACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCVCRGC*PRTTGS
Trigger: TGACCCAGTGGTGCGAGGGCAGCAGCCTCTACAAAC...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTCAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAAGTTTGGTGCCTTATGTaGAAAATGTCTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKVWCLM*KMSGAA
Trigger: TGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGTTTGGTGCCTTATGTaGAAAATGTCTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPVWCLM*KMSGAA
Trigger: TGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTCTGAGAGGGCTGAGATaGGGATTGGCCGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCLRGLR*GLAECL
Trigger: AAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAG...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAATCCCGCCATCTAAGATaGCGGCCCAAGCGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: SLKKVPPVTCIPPEADFQSRHLR*RPKRPR
Trigger: TCGCGGGCGCTTGGGCCGCCATCTTAGATGGCGGGA...TTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTTTACCTTTGTGTTCGTaGAGAAGTCTGAACACTGCA +
Preference number: 4 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGLPLCS*RSLNTA
Trigger: TGCAGTGTTCAGACTTCTCCACGAACACAAAGGTAA...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGTCATTCCTGAAGGCCTaGAATTGCTCTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NVGREQDTPALQMASFSQSFLKA*NCSGVG
Trigger: CCCAACCCCAGAGCAATTCCAGGCCTTCAGGAATGA...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAACAGTCCTGGGCTGTTTaGTGCCTTATGTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPEQSWAV*CLMCKM
Trigger: CATTTTGCACATAAGGCACCAAACAGCCCAGGACTG...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTGAGTTTGCCATCATCTaGTGCCCGGCGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAEFAII*CPALIA
Trigger: GGCTATCAGCGCCGGGCATCAGATGATGGCAAACTC...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR TCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTTGAGCAGGAATTTCTaGCAGATGTCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAALSRNF*QMSQKA
Trigger: TGCCTTCTGTGACATCTGTCAGAAATTCCTGCTCAA...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGACATCGAAATCCATTaGGCAGGAATTTCTGACAGA +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLDIEIH*AGISDR
Trigger: TCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTC...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTACAATAAGAGTTGTCTaGTGTTACTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: VWAARCKDGSEALRLIFGTIRVV*CYSSPH
Trigger: GTGTGGACTGGAGTAACATCAGACAACTCTTATTGT...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGACAATAAGAGTTGTCTaGTGTTACTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLTIRVV*CYSSPH
Trigger: GTGTGGACTGGAGTAACATCAGACAACTCTTATTGT...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGGGGGTTTTCGGCTGTaGCCAGCCTGTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASGGFRL*PACWAQ
Trigger: CTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAATTCCCAATAATAGCTTaGATCTCTCTGTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKFPIIA*ISLSTR
Trigger: CCTCGTGGACAGAGAGATTCAAGCTATTATTGGGAA...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp TGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGAACCACTCCAGCGTaGCTTTACTGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: CKDGSEALRLIFGRECWSRTTPA*LYCCQT
Trigger: GGTTTGGCAACAGTAAAGTCACGCTGGAGTGGTTCT...GCTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGGGTTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: RVPCLENHPNALDTLEAVGCSTC*EPLQRD
Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAACC...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAACATCCGACTGGAAACTaGATGGGTTGTTATCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKHPTGN*MGCYPA
Trigger: TGCAGGATAACAACCCATTCAGTTTCCAGTCGGATG...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTTCTGATCTCGGTTGTTaGTGTGAGAATAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VWAARCKDGSEALRLIFGSDLGC*CENKEA
Trigger: AGCTTCCTTATTCTCACATCAACAACCGAGATCAGA...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGTCTGATCTCGGTTGTTaGTGTGAGAATAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLSDLGC*CENKEA
Trigger: AGCTTCCTTATTCTCACATCAACAACCGAGATCAGA...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAGAAAAGAGTTGTCTaGTGTTACTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPEKRVV*CYSSPH
Trigger: GTGTGGACTGGAGTAACATCAGACAACTCTTTTCTC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432427.2
CDS-3UTR GCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTGTTTGTAGAGGCTGCTaGCCTCGCACCACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAVCRGC*PRTTGS
Trigger: TGACCCAGTGGTGCGAGGGCAGCAGCCTCTACAAAC...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGGTGTTTGTAGAGGCTaGTGCCCTCGCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAGVCRG*CPRTTG
Trigger: CCCAGTGGTGCGAGGGCAGCAGCCTCTACAAACACC...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTTCATACAATACGATaGCATAGGAGTAGACATCCG +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLVHTIR*HRSRHP
Trigger: CGGATGTCTACTCCTATGGCATCGTATTGTATGAAC...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GCTGGCACGGGGGTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTGGGGGTTCATACAATACGATaGCATAGGAGTAGACATCCG +
Preference number: 4 (lower is better)
Translates to: AGTGVFGCDQPVGLRLLGVHTIR*HRSRHP
Trigger: CGGATGTCTACTCCTATGGCATCGTATTGTATGAAC...CCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCCGTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGTGTGGGCTGCCCGATaGAAGGATGGCTCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASVWAAR*KDGSEA
Trigger: CGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTCAGAAAAGTGGTGCCTaGTGGCTTCTCCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAQKSGA*WLLLLP
Trigger: GGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTG...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAAGGAAAACCATCCCAATaGACTGGACACCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKGKPSQ*TGHLRS
Trigger: GCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCC...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTTGCGGATTGGCCGAGTaGCTTGCCTGGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCCGLAE*LAWKTI
Trigger: GATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCA...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCGCTGTGACTTCGAATTaGATCTCTTCCCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAAAVTSN*ISSPQT
Trigger: TGTTTGAGGGGAAGAGATGCAATTCGAAGTCACAGC...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS-3UTR CCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGGTCGACCTCTGCCTCTaGGAGAGGGAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RVPCLENHPNALDTLEAVVDLCL*EREPSD
Trigger: ATCTGAAGGTTCCCTCTCCCAGAGGCAGAGGTCGAC...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCGATTGTTGGGGCTACTaGACAGGGCTGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ADFQNPMCLHIRAGLPATDCWGY*TGLKVR
Trigger: CCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATC...GGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCACCGCTCTCTTTGTGCTaGCACGGGGGTTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAPLSLC*HGGFRL
Trigger: CAGCCGAAAACCCCCGTGCCAGCACAAAGAGAGCGG...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp CAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAGCCGCTCTCTTTGTGCTaGCACGGGGGTTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: QGWTACYLTSSKYSCSQQPLSLC*HGGFRL
Trigger: CAGCCGAAAACCCCCGTGCCAGCACAAAGAGAGCGG...CTGTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCTGACCCAATCCGAGTaGACAGCATCACTTCACTGG +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGLTQSE*TASLHW
Trigger: CCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAG...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCCATTCGGATCACCTCTaGGGCCATCCAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: ADFQNPMCLHIRAGLPATHSDHL*GHPEDR
Trigger: TCTGTCCTCTGGATGGCCCCAGAGGTGATCCGAATG...GGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCCGACTGGAAACTGAATaGGTTGTTATCCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAARLETE*VVILHS
Trigger: CGAATGCAGGATAACAACCCATTCAGTTTCCAGTCG...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp CTGGGGTTGGGTCGACAACCTTTAGGATCTTTACTGCAACATCTCCGTGCCATTTGCCCGATGCAAGGATaGCTCGGAAGCGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: LGLGRQPLGSLLQHLRAICPMQG*LGSAPV
Trigger: AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCA...AATGGCACGGAGATGTTGCAGTAAAGATCCTAAAGGTTGTCGACCCAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGTTGATATCCTCAGTGTaGGCTGCCCGATGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: NVGREQDTPALQMASFSQLISSV*AARCKD
Trigger: ATCCTTGCATCGGGCAGCCCACACTGAGGATATCAA...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTAAAAGTGGTGCCTGCTaGCTTCTCCTCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAKSGAC*LLLLPW
Trigger: CCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTT...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAGTCTCGGCAGTCCTaGGCTGTTTGGTGCCTTATG +
Preference number: 4 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCESRQS*AVWCLM
Trigger: CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTC...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
3UTR CAA 72 bp TGGGCCCCTGCTTTTTGTACTACCATCAACATCCACTaGCGCATCTACAGAAGGCTGGGCCTTGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: WAPAFCTTINIH*RIYRRLGLEHG
Trigger: CCCATGCTCAAGGCCCAGCCTTCTGTAGATGCGCAAGTGGATGTTGATGGTAGTACAAAAAGCAGGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGAGTTTGCCATCATCTaGTGCCCGGCGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCEFAII*CPALIA
Trigger: GGCTATCAGCGCCGGGCATCAGATGATGGCAAACTC...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR TCA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTTCCAGGAAATCTACTTaGAGTTCTTCTCCAATCAAA +
Preference number: 4 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGSRKST*SSSPIK
Trigger: TTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGA...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCGACATCGAAATCCATTaGGCAGGAATTTCTGACAGA +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAADIEIH*AGISDR
Trigger: TCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTC...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGGGTTGTTCAACCTGCTaGGAACCACTCCAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: ALPGKPSQCTGHLRSCERGCSTC*EPLQRD
Trigger: GTCACGCTGGAGTGGTTCTCAGCAGGTTGAACAACC...CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGCGGAAGCGCTCCGGTTaGTCTTCGGTAGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCERKRSG*SSVESV
Trigger: AACACTCTCTACCGAAGATCAACCGGAGCGCTTCCG...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGGTCCCAGATACTGGTaGCCGCTCTCTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCGPRYW*PLSLCW
Trigger: CCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACC...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGTTTGTAGAGGCTGCTaGCCTCGCACCACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAVCRGC*PRTTGS
Trigger: TGACCCAGTGGTGCGAGGGCAGCAGCCTCTACAAAC...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGGGAGCAGAAAAGTGGTaGCTGCTGGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALPGKPSQCTGHLRSCERGAEKW*LLASPP
Trigger: AGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCC...CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp CCTGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGCAGGGCTGGACTGCCTaGTACCTTACTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: PGLFGALCAKCLALHHSLQGWTA*YLTSSK
Trigger: TTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG...CAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTGTCGACCTCTGCCTCTaGGAGAGGGAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAVDLCL*EREPSD
Trigger: ATCTGAAGGTTCCCTCTCCCAGAGGCAGAGGTCGAC...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTGATTGTTGGGGCTACTaGACAGGGCTGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAADCWGY*TGLKVR
Trigger: CCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATC...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCCGCTCTCTTTGTGCTaGCACGGGGGTTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASPLSLC*HGGFRL
Trigger: CAGCCGAAAACCCCCGTGCCAGCACAAAGAGAGCGG...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp TCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTCTGGGTCCCAGATACTaGTGCCCGCTCTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SPRAQRDRKEGNMKLRPCLGPRY*CPLSLC
Trigger: GCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAG...ACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp TTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTTACTTCTGGGTCCCAGATACTaGTGCCCGCTCTCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: FQNPMCLHIRAGLPATLLLGPRY*CPLSLC
Trigger: GCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAG...AAGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTTGCCCGATGCAAGGATaGCTCGGAAGCGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASCPMQG*LGSAPV
Trigger: AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCA...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTTGCCCGATGCAAGGATaGCTCGGAAGCGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESCPMQG*LGSAPV
Trigger: AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCA...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGGAGTCTCGGCAGTCCTaGGCTGTTTGGTGCCTTATG +
Preference number: 4 (lower is better)
Translates to: ALPGKPSQCTGHLRSCERESRQS*AVWCLM
Trigger: CATAAGGCACCAAACAGCCCAGGACTGCCGAGACTC...CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGCAAAGCCCGGCCAGCTaGCCCTTTTCGGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQQSPAS*PFSGPK
Trigger: TTTGGGCCCCGAAAAGGGTCAGCTGGCCGGGCTTTG...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS-3UTR TCA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTCTGTATGTGCTCCATTaGTGCAGCTTAAACAATTCT +
Preference number: 4 (lower is better)
Translates to: EREQKSGACWLLLLPWQPLYVLH*CSLNNS
Trigger: AGAATTGTTTAAGCTGCATCAATGGAGCACATACAG...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR TCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGGGGGGTTTTCGGCTGTaGCCAGCCTGTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQGGFRL*PACWAQ
Trigger: CTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCC...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCAGCGTGCAAGCATTaGTATCCTCAGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAASACKH*YPQCGL
Trigger: CAGCCCACACTGAGGATATCAATGCTTGCACGCTGA...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGAGCAGAATGTTCACATaGCGTGTTTTGCGCAGAACA +
Preference number: 4 (lower is better)
Translates to: NVGREQDTPALQMASFSQSRMFT*RVLRRT
Trigger: TGTTCTGCGCAAAACACGGCATGTGAACATTCTGCT...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGGTGTGGGCTGCCCGATaGAAGGATGGCTCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQVWAAR*KDGSEA
Trigger: CGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGAGGACACACCAGCACTaGAAATGGCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCERTHQH*KWLPSP
Trigger: GGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCT...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTAGGACACACCAGCACTaGAAATGGCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAARTHQH*KWLPSP
Trigger: GGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCT...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGAGCATGATGGAAGACTaGTCCCTGAGAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALPGKPSQCTGHLRSCERSMMED*SLRGLR
Trigger: TCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCT...CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTTCCCGCCATCTAAGATaGCGGCCCAAGCGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: KELSDVTPVHTHSRYFGASRHLR*RPKRPR
Trigger: TCGCGGGCGCTTGGGCCGCCATCTTAGATGGCGGGA...AGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR CCA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCCCGCTCTCTTTGTGCTaGCACGGGGGTTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: VTCIPPEADFQNPMCLHIPLSLC*HGGFRL
Trigger: CAGCCGAAAACCCCCGTGCCAGCACAAAGAGAGCGG...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGACAGCATCACTTCACTaGCTTCTATTTCCCAATAAT +
Preference number: 4 (lower is better)
Translates to: YQSRLLRAARVSAVLGCLTASLH*LLFPNN
Trigger: ATTATTGGGAAATAGAAGCCAGTGAAGTGATGCTGT...CAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGGCCTGGAATTGCTCTaGGGTTGGGTCGACAACCTT +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCGLELL*GWVDNL
Trigger: AAGGTTGTCGACCCAACCCCAGAGCAATTCCAGGCC...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGCCTGGAATTGCTCTaGGGTTGGGTCGACAACCTT +
Preference number: 4 (lower is better)
Translates to: VPCLENHPNALDTLEAVKGLELL*GWVDNL
Trigger: AAGGTTGTCGACCCAACCCCAGAGCAATTCCAGGCC...TTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCATTCCTGAAGGCCTaGAATTGCTCTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAASFLKA*NCSGVG
Trigger: CCCAACCCCAGAGCAATTCCAGGCCTTCAGGAATGA...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACACTGCCCTCGCACCACTaGGTCACAATTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTLPSHH*VTIARL
Trigger: CAACCTGGCAATTGTGACCCAGTGGTGCGAGGGCAG...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTCATTCGGATCACCTCTaGGGCCATCCAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCHSDHL*GHPEDR
Trigger: TCTGTCCTCTGGATGGCCCCAGAGGTGATCCGAATG...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTAAAAGTGGTGCCTGCTaGCTTCTCCTCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESKSGAC*LLLLPW
Trigger: CCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTT...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGGACATCGAAATCCATTaGGCAGGAATTTCTGACAGA +
Preference number: 4 (lower is better)
Translates to: NVGREQDTPALQMASFSQDIEIH*AGISDR
Trigger: TCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTC...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTGAGGCTGATTCGCTGTaGCTTCGAATTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAEADSL*LRIASS
Trigger: TGAGGATGCAATTCGAAGTCACAGCGAATCAGCCTC...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
CDS-3UTR TCA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAATCATGTCTCTATGGATaGTGTTCTTTGCATGCAAAT +
Preference number: 4 (lower is better)
Translates to: REQKSGACWLLLLPWQPESCLYG*CSLHAN
Trigger: ATTTGCATGCAAAGAACATCATCCATAGAGACATGA...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTAGAACCACTCCAGCGTaGCTTTACTGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAARTTPA*LYCCQT
Trigger: GGTTTGGCAACAGTAAAGTCACGCTGGAGTGGTTCT...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCGGAAGCGCTCCGGTTaGTCTTCGGTAGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASRKRSG*SSVESV
Trigger: AACACTCTCTACCGAAGATCAACCGGAGCGCTTCCG...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGAGAAAGTCCCGCCTGTaGCATGCATTCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSRKSRL*HAFLQK
Trigger: CTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCT...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCGGTCCCAGATACTGGTaGCCGCTCTCTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VTCIPPEADFQNPMCLHIGPRYW*PLSLCW
Trigger: CCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACC...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACACTGAAGGCCTGGAATTaGTCTGGGGTTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTLKAWN*SGVGST
Trigger: TGTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAG...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAGGCCTGGAATTaGTCTGGGGTTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASLKAWN*SGVGST
Trigger: TGTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAG...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGTCACATGCCGTGTTTTaGGCAGAACAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCESHAVF*AEQPPH
Trigger: ATGAGGTGGCTGTTCTGCGCAAAACACGGCATGTGA...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGGAGCAGAAAAGTGGTaGCTGCTGGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASGAEKW*LLASPP
Trigger: AGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTTGCGGATTGGCCGAGTaGCTTGCCTGGAAAACCATC +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESCGLAE*LAWKTI
Trigger: GATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCA...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCCACTGCACAGCACTCTaGTTGCAGGCCCCTCACCTT +
Preference number: 4 (lower is better)
Translates to: VTCIPPEADFQNPMCLHIHCTAL*LQAPHL
Trigger: AAGGTGAGGGGCCTGCAACCAGAGTGCTGTGCAGTG...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACAGTCGACCTCTGCCTCTaGGAGAGGGAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTVDLCL*EREPSD
Trigger: ATCTGAAGGTTCCCTCTCCCAGAGGCAGAGGTCGAC...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCACAGCATCACTTCACTaGCTTCTATTTCCCAATAAT +
Preference number: 4 (lower is better)
Translates to: RKGAEKWCLLASPPPLAATASLH*LLFPNN
Trigger: ATTATTGGGAAATAGAAGCCAGTGAAGTGATGCTGT...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGGCCTGGAATTGCTCTaGGGTTGGGTCGACAACCTT +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASGLELL*GWVDNL
Trigger: AAGGTTGTCGACCCAACCCCAGAGCAATTCCAGGCC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTTCATTCCTGAAGGCCTaGAATTGCTCTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCSFLKA*NCSGVG
Trigger: CCCAACCCCAGAGCAATTCCAGGCCTTCAGGAATGA...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp CTGGGGTTGGGTCGACAACCTTTAGGATCTTTACTGCAACATCTCCGTGCCATTAAGGGAGCAGAAAAGTaGTGCCTGCTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGLGRQPLGSLLQHLRAIKGAEK*CLLASP
Trigger: AGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTT...AATGGCACGGAGATGTTGCAGTAAAGATCCTAAAGGTTGTCGACCCAACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp TCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTTCTCCACATCAGGGCTaGACTGCCTGCTACCTTACT +
Preference number: 4 (lower is better)
Translates to: SPRAQRDRKEGNMKLRPCSPHQG*TACYLT
Trigger: AGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGA...ACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAGCCGAGTGCCTTGCCTaGAAAACCATCCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: SLKKVPPVTCIPPEADFQAECLA*KTIPMH
Trigger: GTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGC...TTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGCATAGGGGCAGCTCCTaGAAGACAAAATTCAGCATG +
Preference number: 4 (lower is better)
Translates to: RVPCLENHPNALDTLEAVHRGSS*KTKFSM
Trigger: CATGCTGAATTTTGTCTTCCAGGAGCTGCCCCTATG...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGAGGGAACCTTCAGATaGGGGACTGGAGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAEGTFR*GTGGVK
Trigger: TTTAACACCTCCAGTCCCTCATCTGAAGGTTCCCTC...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGAGGCTGATTCGCTGTaGCTTCGAATTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: VPCLENHPNALDTLEAVKEADSL*LRIASS
Trigger: TGAGGATGCAATTCGAAGTCACAGCGAATCAGCCTC...TTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251849.9
CDS-3UTR TCA 90 bp CTGGGGTTGGGTCGACAACCTTTAGGATCTTTACTGCAACATCTCCGTGCCATTGAGGCTGATTCGCTGTaGCTTCGAATTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LGLGRQPLGSLLQHLRAIEADSL*LRIASS
Trigger: TGAGGATGCAATTCGAAGTCACAGCGAATCAGCCTC...AATGGCACGGAGATGTTGCAGTAAAGATCCTAAAGGTTGTCGACCCAACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTCATCCGACTGGAAACTaGATGGGTTGTTATCCTGCA +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAHPTGN*MGCYPA
Trigger: TGCAGGATAACAACCCATTCAGTTTCCAGTCGGATG...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp CAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAGGAGAAGTCTGAACACTaGACAGCACTCTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QGWTACYLTSSKYSCSQQEKSEH*TALWLQ
Trigger: CTGCAACCAGAGTGCTGTGCAGTGTTCAGACTTCTC...CTGTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp TCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGAAGTCTGAACACTaGACAGCACTCTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SPRAQRDRKEGNMKLRPCEKSEH*TALWLQ
Trigger: CTGCAACCAGAGTGCTGTGCAGTGTTCAGACTTCTC...ACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAATCACATGCCGTGTTTTaGGCAGAACAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: VPCLENHPNALDTLEAVKSHAVF*AEQPPH
Trigger: ATGAGGTGGCTGTTCTGCGCAAAACACGGCATGTGA...TTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCGTTCATACAATACGATaGCATAGGAGTAGACATCCG +
Preference number: 4 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGVHTIR*HRSRHP
Trigger: CGGATGTCTACTCCTATGGCATCGTATTGTATGAAC...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTAGGACACACCAGCACTaGAAATGGCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASRTHQH*KWLPSP
Trigger: GGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCT...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCACCATCAACATCCACTTaGGCATCTACAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAPSTST*ASTEGW
Trigger: CCAGCCTTCTGTAGATGCGCAAGTGGATGTTGATGG...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGCCATCAACATCCACTTaGGCATCTACAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSPSTST*ASTEGW
Trigger: CCAGCCTTCTGTAGATGCGCAAGTGGATGTTGATGG...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTAGCATGATGGAAGACTaGTCCCTGAGAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESSMMED*SLRGLR
Trigger: TCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCT...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGACCCAATCCGAGTaGACAGCATCACTTCACTGG +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASLTQSE*TASLHW
Trigger: CCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAG...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGCGACTGGAAACTGAATaGGTTGTTATCCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: RVPCLENHPNALDTLEAVRLETE*VVILHS
Trigger: CGAATGCAGGATAACAACCCATTCAGTTTCCAGTCG...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGTTCGGTAGAGAGTGTTaGAGCAGCTCAATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCEFGREC*SSSMED
Trigger: GTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAA...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCATTGATATCCTCAGTGTaGGCTGCCCGATGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAALISSV*AARCKD
Trigger: ATCCTTGCATCGGGCAGCCCACACTGAGGATATCAA...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTTTGATATCCTCAGTGTaGGCTGCCCGATGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCLISSV*AARCKD
Trigger: ATCCTTGCATCGGGCAGCCCACACTGAGGATATCAA...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp CAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAGTCAAACAAAATCGTCTaGACCACGCCCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QGWTACYLTSSKYSCSQQSNKIV*TTPWEK
Trigger: CTTCTCCCAGGGCGTGGTCCAGACGATTTTGTTTGA...CTGTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS-3UTR TCA 90 bp AAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTGAGTTTGCCATCATCTaGTGCCCGGCGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: KELSDVTPVHTHSRYFGAEFAII*CPALIA
Trigger: GGCTATCAGCGCCGGGCATCAGATGATGGCAAACTC...AGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR TCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGGACATCGAAATCCATTaGGCAGGAATTTCTGACAGA +
Preference number: 4 (lower is better)
Translates to: RVPCLENHPNALDTLEAVDIEIH*AGISDR
Trigger: TCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTC...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCACAATAAGAGTTGTCTaGTGTTACTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: ADFQNPMCLHIRAGLPATTIRVV*CYSSPH
Trigger: GTGTGGACTGGAGTAACATCAGACAACTCTTATTGT...GGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGGTAGAATATCTGTGCTaGGAACTAACAGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCEVEYLC*ELTGIL
Trigger: CAGGATGCCTGTTAGTTCTCAGCACAGATATTCTAC...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGAGGGAACCTTCAGATaGGGGACTGGAGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASEGTFR*GTGGVK
Trigger: TTTAACACCTCCAGTCCCTCATCTGAAGGTTCCCTC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTAGAACCACTCCAGCGTaGCTTTACTGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESRTTPA*LYCCQT
Trigger: GGTTTGGCAACAGTAAAGTCACGCTGGAGTGGTTCT...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTCATCCGACTGGAAACTaGATGGGTTGTTATCCTGCA +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCHPTGN*MGCYPA
Trigger: TGCAGGATAACAACCCATTCAGTTTCCAGTCGGATG...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp CCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCATCCGACTGGAAACTaGATGGGTTGTTATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPVTCIPPEADFQNPMCLHPTGN*MGCYPA
Trigger: TGCAGGATAACAACCCATTCAGTTTCCAGTCGGATG...GAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGCGGAAGCGCTCCGGTTaGTCTTCGGTAGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQRKRSG*SSVESV
Trigger: AACACTCTCTACCGAAGATCAACCGGAGCGCTTCCG...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGCATTCCTCCAGAAGCTaGTTTCCAAAATCCCATGTG +
Preference number: 4 (lower is better)
Translates to: ALPGKPSQCTGHLRSCERHSSRS*FPKSHV
Trigger: CACATGGGATTTTGGAAATCAGCTTCTGGAGGAATG...CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCAGAAAGTCCCGCCTGTaGCATGCATTCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VTCIPPEADFQNPMCLHIRKSRL*HAFLQK
Trigger: CTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCT...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGCTGAAGGCCTGGAATTaGTCTGGGGTTGGGTCGACA +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQLKAWN*SGVGST
Trigger: TGTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAG...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTTCACATGCCGTGTTTTaGGCAGAACAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASSHAVF*AEQPPH
Trigger: ATGAGGTGGCTGTTCTGCGCAAAACACGGCATGTGA...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTAGCAGAATGTTCACATaGCGTGTTTTGCGCAGAACA +
Preference number: 4 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAASRMFT*RVLRRT
Trigger: TGTTCTGCGCAAAACACGGCATGTGAACATTCTGCT...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACCAGGGCTGGACTGCCTaGTACCTTACTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: IRAGLPATLLPLNTHVANQGWTA*YLTSSK
Trigger: TTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGAAAACCATCCCAATaGACTGGACACCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSGKPSQ*TGHLRS
Trigger: GCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCC...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp ATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGTTTTACACTGTTCTTTaGTTGTTCGGCAAGAAAACA +
Preference number: 4 (lower is better)
Translates to: IDILSVGCPMQGWLGSAPFYTVL*LFGKKT
Trigger: TGTTTTCTTGCCGAACAAGCAAAGAACAGTGTAAAA...CGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTTATTCTCAATCATCCTaGTGTCCACAGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESYSQSS*CPQAGW
Trigger: CCACCCTGCCTGTGGACAGCAGGATGATTGAGAATA...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS-3UTR CCA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACAGTCGACCTCTGCCTCTaGGAGAGGGAACCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTVDLCL*EREPSD
Trigger: ATCTGAAGGTTCCCTCTCCCAGAGGCAGAGGTCGAC...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS-3UTR CCA 90 bp GGTAGTGCTGGGACTCCACTATCACCAATAGTGGAATTTGGAAACAATAAGAGTCTGCCCTCGCACCACTaGGTCACAATTGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSAGTPLSPIVEFGNNKSLPSHH*VTIARL
Trigger: CAACCTGGCAATTGTGACCCAGTGGTGCGAGGGCAG...ACTCTTATTGTTTCCAAATTCCACTATTGGTGATAGTGGAGTCCCAGCACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTTTGATATCCTCAGTGTaGGCTGCCCGATGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESLISSV*AARCKD
Trigger: ATCCTTGCATCGGGCAGCCCACACTGAGGATATCAA...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp CAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAGCATAGGGGCAGCTCCTaGAAGACAAAATTCAGCATG +
Preference number: 4 (lower is better)
Translates to: QGWTACYLTSSKYSCSQQHRGSS*KTKFSM
Trigger: CATGCTGAATTTTGTCTTCCAGGAGCTGCCCCTATG...CTGTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCATTGAGCAGGAATTTCTaGCAGATGTCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAALSRNF*QMSQKA
Trigger: TGCCTTCTGTGACATCTGTCAGAAATTCCTGCTCAA...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp TTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTTACTTGTAGAATATCTGTGCTaGGAACTAACAGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: FQNPMCLHIRAGLPATLLVEYLC*ELTGIL
Trigger: CAGGATGCCTGTTAGTTCTCAGCACAGATATTCTAC...AAGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp CTGGGGTTGGGTCGACAACCTTTAGGATCTTTACTGCAACATCTCCGTGCCATTGTAGAATATCTGTGCTaGGAACTAACAGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: LGLGRQPLGSLLQHLRAIVEYLC*ELTGIL
Trigger: CAGGATGCCTGTTAGTTCTCAGCACAGATATTCTAC...AATGGCACGGAGATGTTGCAGTAAAGATCCTAAAGGTTGTCGACCCAACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCATTCCCAATAATAGCTTaGATCTCTCTGTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAFPIIA*ISLSTR
Trigger: CCTCGTGGACAGAGAGATTCAAGCTATTATTGGGAA...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTTTCCCAATAATAGCTTaGATCTCTCTGTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCFPIIA*ISLSTR
Trigger: CCTCGTGGACAGAGAGATTCAAGCTATTATTGGGAA...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGTGTATACACATGATGTaGCTAGAGAAACAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RVPCLENHPNALDTLEAVCIHMM*LEKQGC
Trigger: ACAGCCTTGTTTCTCTAGTCACATCATGTGTATACA...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTGAGGCTGATTCGCTGTaGCTTCGAATTGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESEADSL*LRIASL
Trigger: AAGAGATGCAATTCGAAGTCACAGCGAATCAGCCTC...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS-3UTR CCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGTTACCTTTGTGTTCGTaGAGAAGTCTGAACACTGCA +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCELPLCS*RSLNTA
Trigger: TGCAGTGTTCAGACTTCTCCACGAACACAAAGGTAA...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGCTGACCCAATCCGAGTaGACAGCATCACTTCACTGG +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQLTQSE*TASLHW
Trigger: CCAGTGAAGTGATGCTGTCCACTCGGATTGGGTCAG...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp GGTAGTGCTGGGACTCCACTATCACCAATAGTGGAATTTGGAAACAATAAGAGTCATTCGGATCACCTCTaGGGCCATCCAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GSAGTPLSPIVEFGNNKSHSDHL*GHPEDR
Trigger: TCTGTCCTCTGGATGGCCCCAGAGGTGATCCGAATG...ACTCTTATTGTTTCCAAATTCCACTATTGGTGATAGTGGAGTCCCAGCACTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp CCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCGACTGGAAACTGAATaGGTTGTTATCCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: PPVTCIPPEADFQNPMCLRLETE*VVILHS
Trigger: CGAATGCAGGATAACAACCCATTCAGTTTCCAGTCG...GAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATTCGGTAGAGAGTGTTaGAGCAGCTCAATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTFGREC*SSSMED
Trigger: GTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAA...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp TCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAACAGTCCTGGGCTGTTTaGTGCCTTATGTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: SLKKVPPVTCIPPEADFQQSWAV*CLMCKM
Trigger: CATTTTGCACATAAGGCACCAAACAGCCCAGGACTG...TTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGTTCCATTTCGCACATTaGCCACTGTTCTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSFHFAH*PLFFAC
Trigger: ACAAGCAAAGAACAGTGGTCAATGTGCGAAATGGAA...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GTGCTGAGAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACGAGGGAACCTTCAGATaGGGGACTGGAGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: VLRKELSDVTPVHTHSRYEGTFR*GTGGVK
Trigger: TTTAACACCTCCAGTCCCTCATCTGAAGGTTCCCTC...GTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTCTCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR TCA 90 bp TCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAATTCCCAATAATAGCTTaGATCTCTCTGTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SLKKVPPVTCIPPEADFQFPIIA*ISLSTR
Trigger: CCTCGTGGACAGAGAGATTCAAGCTATTATTGGGAA...TTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTTCTGATCTCGGTTGTTaGTGTGAGAATAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCSDLGC*CENKEA
Trigger: AGCTTCCTTATTCTCACATCAACAACCGAGATCAGA...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR GCA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAGCAGAATGTTCACATaGCGTGTTTTGCGCAGAACA +
Preference number: 4 (lower is better)
Translates to: IRAGLPATLLPLNTHVANSRMFT*RVLRRT
Trigger: TGTTCTGCGCAAAACACGGCATGTGAACATTCTGCT...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR GCA 90 bp TCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGTTCATACAATACGATaGCATAGGAGTAGACATCCG +
Preference number: 4 (lower is better)
Translates to: SPRAQRDRKEGNMKLRPCVHTIR*HRSRHP
Trigger: CGGATGTCTACTCCTATGGCATCGTATTGTATGAAC...ACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGTTACCTTTGTGTTCGTaGAGAAGTCTGAACACTGCA +
Preference number: 4 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSLPLCS*RSLNTA
Trigger: TGCAGTGTTCAGACTTCTCCACGAACACAAAGGTAA...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGATCCAAAACCATTGCTaGTCGTCTTCCAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQIQNHC*SSSKLP
Trigger: AGGGAGCTTGGAAGACGATCAGCAATGGTTTTGGAT...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS-3UTR TCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTTTCCATTTCGCACATTaGCCACTGTTCTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESFHFAH*PLFFAC
Trigger: ACAAGCAAAGAACAGTGGTCAATGTGCGAAATGGAA...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGTCCAGGAAATCTACTTaGAGTTCTTCTCCAATCAAA +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCESRKST*SSSPIK
Trigger: TTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGA...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCTTGAGCAGGAATTTCTaGCAGATGTCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VTCIPPEADFQNPMCLHILSRNF*QMSQKA
Trigger: TGCCTTCTGTGACATCTGTCAGAAATTCCTGCTCAA...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTTCTGATCTCGGTTGTTaGTGTGAGAATAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESSDLGC*CENKEA
Trigger: AGCTTCCTTATTCTCACATCAACAACCGAGATCAGA...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CCA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGACAGCATCACTTCACTaGCTTCTATTTCCCAATAAT +
Preference number: 4 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCETASLH*LLFPNN
Trigger: ATTATTGGGAAATAGAAGCCAGTGAAGTGATGCTGT...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCATCCAGGAAATCTACTTaGAGTTCTTCTCCAATCAAA +
Preference number: 4 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAASRKST*SSSPIK
Trigger: TTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGA...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp CAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAGTCATGTCTCTATGGATaGTGTTCTTTGCATGCAAAT +
Preference number: 4 (lower is better)
Translates to: QGWTACYLTSSKYSCSQQSCLYG*CSLHAN
Trigger: ATTTGCATGCAAAGAACATCATCCATAGAGACATGA...CTGTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTTGTATACACATGATGTaGCTAGAGAAACAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VWCLMCKMSGAAPLSEESCIHMM*LEKQGC
Trigger: ACAGCCTTGTTTCTCTAGTCACATCATGTGTATACA...ACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACAGTAGAATATCTGTGCTaGGAAAAGAGTTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTVEYLC*EKSCLM
Trigger: CATCAGACAACTCTTTTCTCAGCACAGATATTCTAC...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432427.2
CDS-3UTR CCA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTACAGCATCACTTCACTaGCTTCTATTTCCCAATAAT +
Preference number: 4 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCTASLH*LLFPNN
Trigger: ATTATTGGGAAATAGAAGCCAGTGAAGTGATGCTGT...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CCA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACACGACTGGAAACTGAATaGGTTGTTATCCTGCATTCG +
Preference number: 4 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTRLETE*VVILHS
Trigger: CGAATGCAGGATAACAACCCATTCAGTTTCCAGTCG...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CCA 90 bp GGTAGTGCTGGGACTCCACTATCACCAATAGTGGAATTTGGAAACAATAAGAGTTTCGGTAGAGAGTGTTaGAGCAGCTCAATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: GSAGTPLSPIVEFGNNKSFGREC*SSSMED
Trigger: GTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAA...ACTCTTATTGTTTCCAAATTCCACTATTGGTGATAGTGGAGTCCCAGCACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR TCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATCCAGGAAATCTACTTaGAGTTCTTCTCCAATCAAA +
Preference number: 4 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTSRKST*SSSPIK
Trigger: TTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGA...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGTTGAGCAGGAATTTCTaGCAGATGTCACAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EKSCLMLLQSTHIVGTLVLSRNF*QMSQKA
Trigger: TGCCTTCTGTGACATCTGTCAGAAATTCCTGCTCAA...CACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR TCA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACAGACATCGAAATCCATTaGGCAGGAATTTCTGACAGA +
Preference number: 4 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTDIEIH*AGISDR
Trigger: TCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTC...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS-3UTR TCA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATCATGTCTCTATGGATaGTGTTCTTTGCATGCAAAT +
Preference number: 4 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTSCLYG*CSLHAN
Trigger: ATTTGCATGCAAAGAACATCATCCATAGAGACATGA...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR TCA 90 bp GAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGGAGAAAAGAGTTGTCTaGTGTTACTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: EKSCLMLLQSTHIVGTLVEKRVV*CYSSPH
Trigger: GTGTGGACTGGAGTAACATCAGACAACTCTTTTCTC...CACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR TCA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGGTAGAATATCTGTGCTaGGAAAAGAGTTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQVEYLC*EKSCLM
Trigger: CATCAGACAACTCTTTTCTCAGCACAGATATTCTAC...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416093.1
3UTR CAA 72 bp CCCAAATCATCAAGAAAACCTGTATTCCTGGCTTCCTaGTATACACATGATGTGACTAGAGAAACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PKSSRKPVFLAS*YTHDVTRETRL
Trigger: CAGCCTTGTTTCTCTAGTCACATCATGTGTATACAAGGAAGCCAGGAATACAGGTTTTCTTGATGATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR TCA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACATCCAGGAAATCTACTTaGAGTTCTTCTCCAATCAAA +
Preference number: 4 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTSRKST*SSSPIK
Trigger: TTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGA...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS-3UTR TCA 90 bp GGTAGTGCTGGGACTCCACTATCACCAATAGTGGAATTTGGAAACAATAAGAGTTCATGTCTCTATGGATaGTGTTCTTTGCATGCAAAT +
Preference number: 4 (lower is better)
Translates to: GSAGTPLSPIVEFGNNKSSCLYG*CSLHAN
Trigger: ATTTGCATGCAAAGAACATCATCCATAGAGACATGA...ACTCTTATTGTTTCCAAATTCCACTATTGGTGATAGTGGAGTCCCAGCACTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR GCA 90 bp GAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGTTTTACACTGTTCTTTaGTTGTTCGGCAAGAAAACA +
Preference number: 4 (lower is better)
Translates to: EKSCLMLLQSTHIVGTLVFYTVL*LFGKKT
Trigger: TGTTTTCTTGCCGAACAAGCAAAGAACAGTGTAAAA...CACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR CAA 90 bp ACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGCCTGTTGGGCTCAGATaGTTGGGGCTACTGGACAGG +
Preference number: 5 (lower is better)
Translates to: TKAGSFGRPESRQSWAVWPVGLR*LGLLDR
Trigger: CCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGG...CCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAATGCACAGCACTCTGGTaGCAGGCCCCTCACCTTGAG +
Preference number: 5 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKCTALW*QAPHLE
Trigger: CTCAAGGTGAGGGGCCTGCAACCAGAGTGCTGTGCA...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp CCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGATTGGCCGAGTGCCTaGCCTGGAAAACCATCCCAA +
Preference number: 5 (lower is better)
Translates to: PKQAPSGGQSLGSPGLFGDWPSA*PGKPSQ
Trigger: TTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATC...ACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGTTGGGCTCAGATTGTaGGGGCTACTGGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: EREQKSGACWLLLLPWQPVGLRL*GLLDRA
Trigger: AGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAAC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp AGAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCCCTGTTGGGCTCAGATaGTTGGGGCTACTGGACAGG +
Preference number: 5 (lower is better)
Translates to: RKGAEKWCLLASPPPLAAPVGLR*LGLLDR
Trigger: CCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGG...GGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTTCGGAAGCGCTCCGGTaGATCTTCGGTAGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: EREQKSGACWLLLLPWQPSEALR*IFGREC
Trigger: ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGA...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAGATTGGCCGAGTGCCTaGCCTGGAAAACCATCCCAA +
Preference number: 5 (lower is better)
Translates to: REQKSGACWLLLLPWQPEDWPSA*PGKPSQ
Trigger: TTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATC...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAGAAGGATCTGTGAGTTaGCCATCATCTGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: REQKSGACWLLLLPWQPEEGSVS*PSSDAR
Trigger: CCGGGCATCAGATGATGGCAAACTCACAGATCCTTC...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR CAA 90 bp GTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTCCACGAGGCCTAATTTaGTTTTTCTCCTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: VWAARCKDGSEALRLIFGPRGLI*FFSWVP
Trigger: TGGGACCCAGGAGAAAAACAAAATTAGGCCTCGTGG...ACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAGGAATTGCTCTGGGGTaGGGTCGACAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: REQKSGACWLLLLPWQPEGIALG*GRQPLG
Trigger: TCCTAAAGGTTGTCGACCCAACCCCAGAGCAATTCC...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp ATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGTCGGAAGCGCTCCGGTaGATCTTCGGTAGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: IDILSVGCPMQGWLGSAPSEALR*IFGREC
Trigger: ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGA...CGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS CCA 90 bp GCACGGGGGTTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTGAAGGTGAGGCTTAATAGACAAGAC +
Preference number: 5 (lower is better)
Translates to: ARGFSAVTSLLGSDC*GYWTGLKVRLNRQD
Trigger: GTCTTGTCTATTAAGCCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAACCCCCGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491290.1
CDS-3UTR CAA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAAGAAGGATCTGTGAGTTaGCCATCATCTGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKEGSVS*PSSDAR
Trigger: CCGGGCATCAGATGATGGCAAACTCACAGATCCTTC...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAACCACGAGGCCTAATTTaGTTTTTCTCCTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: DCSLRGLRCGLAECLAWKPRGLI*FFSWVP
Trigger: TGGGACCCAGGAGAAAAACAAAATTAGGCCTCGTGG...TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGTCGGAAGCGCTCCGGTaGATCTTCGGTAGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: NVGREQDTPALQMASFSQSEALR*IFGREC
Trigger: ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGA...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp ATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTCAGCGTGCAAGCATaGATATCCTCAGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: IDILSVGCPMQGWLGSAPVSVQA*ISSVWA
Trigger: AGCCCACACTGAGGATATCAATGCTTGCACGCTGAC...CGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp TCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAAGTCAGCGTGCAAGCATaGATATCCTCAGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: SGGQSLGSPGLFGALCAKVSVQA*ISSVWA
Trigger: AGCCCACACTGAGGATATCAATGCTTGCACGCTGAC...TTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp TTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTTACTTGGGCTGAGATGCGGATaGGCCGAGTGCCTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: FQNPMCLHIRAGLPATLLGLRCG*AECLAW
Trigger: CCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCC...AAGTAAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS CCA 90 bp AGCCACCCCACCCAGCTGGAACCTGAACAACTCATTCCTGATAATTaGCCCCTCCAGCCCAGGCCAGAGGCTTGTGCAAAGATATCACAG +
Preference number: 5 (lower is better)
Translates to: SHPTQLEPEQLIPDN*PLQPRPEACAKISQ
Trigger: CTGTGATATCTTTGCACAAGCCTCTGGCCTGGGCTGGAGGGGCCAATTATCAGGAATGAGTTGTTCAGGTTCCAGCTGGGTGGGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS-3UTR CAA 90 bp GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGTGGTGCCCGCTCTCTTaGTGCTGGCACGGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: ALPGKPSQCTGHLRSCERWCPLS*CWHGGF
Trigger: AAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCA...CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS GCA 90 bp CCTCATGTGGGACAGCCATGCCTCAGACAGCTGAGCAGAAGGCATTaGCACAGCTGTCCAAGCAGAAGGTACATGCACCCCACTATATTC +
Preference number: 5 (lower is better)
Translates to: PHVGQPCLRQLSRRH*HSCPSRRYMHPTIF
Trigger: GAATATAGTGGGGTGCATGTACCTTCTGCTTGGACAGCTGTGGCAATGCCTTCTGCTCAGCTGTCTGAGGCATGGCTGTCCCACATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS-3UTR CAA 90 bp GCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGGAAGGATCTGTGAGTTaGCCATCATCTGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: ALRLIFGRECWSSSMEDREGSVS*PSSDAR
Trigger: CCGGGCATCAGATGATGGCAAACTCACAGATCCTTC...CCTGTCTTCCATTGAGCTGCTCCAACACTCTCTACCGAAGATCAACCGGAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp AATGTGGGGAGGGAGCAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGGTCTTCCGAGCAAAGTaGTGTGTTGTGAGGGGAACA +
Preference number: 5 (lower is better)
Translates to: NVGREQDTPALQMASFSQVFRAK*CVVRGT
Trigger: TGTTCCCCTCACAACACACAACTTTGCTCGGAAGAC...CTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTGCTCCCTCCCCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTGTTGGGCTCAGATTGTaGGGGCTACTGGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAVGLRL*GLLDRA
Trigger: AGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAAC...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTTGGTGCCCGCTCTCTTaGTGCTGGCACGGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCWCPLS*CWHGGF
Trigger: AAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCA...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp CTGGGGTTGGGTCGACAACCTTTAGGATCTTTACTGCAACATCTCCGTGCCATTTGGTGCCCGCTCTCTTaGTGCTGGCACGGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LGLGRQPLGSLLQHLRAIWCPLS*CWHGGF
Trigger: AAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCA...AATGGCACGGAGATGTTGCAGTAAAGATCCTAAAGGTTGTCGACCCAACCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp CCTGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGGGAATTGCTCTGGGGTaGGGTCGACAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: PGLFGALCAKCLALHHSLGIALG*GRQPLG
Trigger: TCCTAAAGGTTGTCGACCCAACCCCAGAGCAATTCC...CAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCACCTGAAGGCCTGGAATaGCTCTGGGGTTGGGTCGAC +
Preference number: 5 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAPEGLE*LWGWVD
Trigger: GTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAGG...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGCCTGAAGGCCTGGAATaGCTCTGGGGTTGGGTCGAC +
Preference number: 5 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSPEGLE*LWGWVD
Trigger: GTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAGG...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp TGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCGTCACAATTGCCAGGTaGTCCTTTGTCATGTACCCC +
Preference number: 5 (lower is better)
Translates to: CKDGSEALRLIFGRECWSVTIAR*SFVMYP
Trigger: GGGGTACATGACAAAGGACAACCTGGCAATTGTGAC...GCTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCGGGCTGAGATGCGGATaGGCCGAGTGCCTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: VTCIPPEADFQNPMCLHIGLRCG*AECLAW
Trigger: CCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCC...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp TTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGTCAAACACGGCATCTTaGAATCCAAAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: FHSTKAGSFGRPESRQSWSNTAS*NPKPLL
Trigger: CAGCAATGGTTTTGGATTCAAAGATGCCGTGTTTGA...CCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp TCCTGGGTCCCAGATACTGGTGCCCGCTCTCTTTGTGCTGGCACGGGGGTTTTCTCAAACACGGCATCTTaGAATCCAAAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: SWVPDTGARSLCAGTGVFSNTAS*NPKPLL
Trigger: CAGCAATGGTTTTGGATTCAAAGATGCCGTGTTTGA...GAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp AGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGAAATTCCATTTCGCACATaGACCACTGTTCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: REQKSGACWLLLLPWQPEIPFRT*TTVLCL
Trigger: CAAGCAAAGAACAGTGGTCAATGTGCGAAATGGAAT...TTCAGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCACCTGTTGGGCTCAGATaGTTGGGGCTACTGGACAGG +
Preference number: 5 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAPVGLR*LGLLDR
Trigger: CCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGG...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp GTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAACCTGTTGGGCTCAGATaGTTGGGGCTACTGGACAGG +
Preference number: 5 (lower is better)
Translates to: VPCLENHPNALDTLEAVKPVGLR*LGLLDR
Trigger: CCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGG...TTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTTGGTGCCCGCTCTCTTaGTGCTGGCACGGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASWCPLS*CWHGGF
Trigger: AAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCA...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGGAATTGCTCTGGGGTaGGGTCGACAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCGIALG*GRQPLG
Trigger: TCCTAAAGGTTGTCGACCCAACCCCAGAGCAATTCC...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAAGGGAGCAGAAAAGTGGTGCCTGCTGGCTTCTCCTCCTCCCCTGGCAGCCTGTATTCCTGGCTTCCTaGTATACACATGATGTGACT +
Preference number: 5 (lower is better)
Translates to: EREQKSGACWLLLLPWQPVFLAS*YTHDVT
Trigger: AGTCACATCATGTGTATACAAGGAAGCCAGGAATAC...AGGCTGCCAGGGGAGGAGGAGAAGCCAGCAGGCACCACTTTTCTGCTCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGTTGGGCTCAGATTGTaGGGGCTACTGGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASVGLRL*GLLDRA
Trigger: AGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAAC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACAGTTGGGCTCAGATTGTaGGGGCTACTGGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTVGLRL*GLLDRA
Trigger: AGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAAC...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp CGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGCCACGAGGCCTAATTTaGTTTTTCTCCTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: RVPCLENHPNALDTLEAVPRGLI*FFSWVP
Trigger: TGGGACCCAGGAGAAAAACAAAATTAGGCCTCGTGG...CACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCCCTGAAGGCCTGGAATaGCTCTGGGGTTGGGTCGAC +
Preference number: 5 (lower is better)
Translates to: VTCIPPEADFQNPMCLHIPEGLE*LWGWVD
Trigger: GTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAGG...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCATCGGAAGCGCTCCGGTaGATCTTCGGTAGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAASEALR*IFGREC
Trigger: ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGA...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTACCATCAACATCCACTaGCGCATCTACAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCTINIH*RIYRRL
Trigger: CAGCCTTCTGTAGATGCGCAAGTGGATGTTGATGGT...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTCGCTGTGACTTCGAATaGCATCTCTTCCCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCRCDFE*HLFPSN
Trigger: GTTTGAGGGGAAGAGATGCAATTCGAAGTCACAGCG...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS GCA 90 bp TATCCCAAAAACAACATCTGCTTAAACCCTCATGTGGGACAGCCATaGCTCAGACAGCTGAGCAGAAGGCATTGCCACAGCTGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: YPKNNICLNPHVGQP*LRQLSRRHCHSCPS
Trigger: GCTTGGACAGCTGTGGCAATGCCTTCTGCTCAGCTGTCTGAGGCATGGCTGTCCCACATGAGGGTTTAAGCAGATGTTGTTTTTGGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS GCA 90 bp CCGACTCTACAAAATACACGAAAATTAGCTGGGCACGGTAGCATGTaGCTGCAGTCCCAGCAACCTATGAGACTGAGCCAAGAGGATAGC +
Preference number: 5 (lower is better)
Translates to: PTLQNTRKLAGHGSM*LQSQQPMRLSQEDS
Trigger: GCTATCCTCTTGGCTCAGTCTCATAGGTTGCTGGGACTGCAGGCACATGCTACCGTGCCCAGCTAATTTTCGTGTATTTTGTAGAGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CCA 90 bp TTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTGGGGCTACTaGACAGGGCTGAAGGTGAGGCTTAATAGACAAGACAAACAGAAG +
Preference number: 5 (lower is better)
Translates to: FSAVTSLLGSDCWGY*TGLKVRLNRQDKQK
Trigger: CTTCTGTTTGTCTTGTCTATTAAGCCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491290.1
CDS CCA 90 bp TCCACTCCAAATCTCAAGTTGAAATGTGATCCCCAGTGTTGGAGGTaGGACCTAAGTGGCAGGTGTTTGGGTCATGGGGATGGATTCCTC +
Preference number: 5 (lower is better)
Translates to: STPNLKLKCDPQCWR*DLSGRCLGHGDGFL
Trigger: GAGGAATCCATCCCCATGACCCAAACACCTGCCACTTAGGTCCCACCTCCAACACTGGGGATCACATTTCAACTTGAGATTTGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS-3UTR CAA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGCCTGAAGGCCTGGAATaGCTCTGGGGTTGGGTCGAC +
Preference number: 5 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQPEGLE*LWGWVD
Trigger: GTCGACCCAACCCCAGAGCAATTCCAGGCCTTCAGG...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGTCAGCGTGCAAGCATaGATATCCTCAGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAVSVQA*ISSVWA
Trigger: AGCCCACACTGAGGATATCAATGCTTGCACGCTGAC...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp TCCTGGGTCCCAGATACTGGTGCCCGCTCTCTTTGTGCTGGCACGGGGGTTTTCTTTTTACACTGTTCTTaGCTTGTTCGGCAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: SWVPDTGARSLCAGTGVFFLHCS*LVRQEN
Trigger: GTTTTCTTGCCGAACAAGCAAAGAACAGTGTAAAAA...GAAAACCCCCGTGCCAGCACAAAGAGAGCGGGCACCAGTATCTGGGACCCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCGGAGAAGCACTCAGGTaGTTATTCTCAATCATCCTG +
Preference number: 5 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGGEALR*LFSIIL
Trigger: CAGGATGATTGAGAATAACAACCTGAGTGCTTCTCC...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS-3UTR CAA 90 bp GACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCTCAAACACGGCATCTTaGAATCCAAAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: DVSPKKSSIVPKQAPSGGSNTAS*NPKPLL
Trigger: CAGCAATGGTTTTGGATTCAAAGATGCCGTGTTTGA...GCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGTCTTCCGAGCAAAGTaGTGTGTTGTGAGGGGAACA +
Preference number: 5 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAVFRAK*CVVRGT
Trigger: TGTTCCCCTCACAACACACAACTTTGCTCGGAAGAC...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTCTTCCGAGCAAAGTaGTGTGTTGTGAGGGGAACA +
Preference number: 5 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCVFRAK*CVVRGT
Trigger: TGTTCCCCTCACAACACACAACTTTGCTCGGAAGAC...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCACCACGAGGCCTAATTTaGTTTTTCTCCTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAPRGLI*FFSWVP
Trigger: TGGGACCCAGGAGAAAAACAAAATTAGGCCTCGTGG...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACAGGAATTGCTCTGGGGTaGGGTCGACAACCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTGIALG*GRQPLG
Trigger: TCCTAAAGGTTGTCGACCCAACCCCAGAGCAATTCC...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTCACAATTGCCAGGTaGTCCTTTGTCATGTACCCC +
Preference number: 5 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCVTIAR*SFVMYP
Trigger: GGGGTACATGACAAAGGACAACCTGGCAATTGTGAC...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACGTCAGCGTGCAAGCATaGATATCCTCAGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: IRAGLPATLLPLNTHVANVSVQA*ISSVWA
Trigger: AGCCCACACTGAGGATATCAATGCTTGCACGCTGAC...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGACCATCAACATCCACTaGCGCATCTACAGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: KEDVSPKKSSIVPKQAPSTINIH*RIYRRL
Trigger: CAGCCTTCTGTAGATGCGCAAGTGGATGTTGATGGT...CGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp TCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTCTGGGCCCCTGCTTTTaGTACTACCATCAACATCCA +
Preference number: 5 (lower is better)
Translates to: SPRAQRDRKEGNMKLRPCLGPCF*YYHQHP
Trigger: TGGATGTTGATGGTAGTACAAAAAGCAGGGGCCCAG...ACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp CCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCGCAGTCCTGGGCTGTTaGGTGCCTTATGTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: PPVTCIPPEADFQNPMCLAVLGC*VPYVQN
Trigger: ATTTTGCACATAAGGCACCAAACAGCCCAGGACTGC...GAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS CCA 90 bp GAATTGCATCTCTTCCCCTCAAACAAAATCGTCTGGACCACGCCCTaGGAGAAGCACTCAGGTTGTTATTCTCAATCATCCTGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ELHLFPSNKIVWTTP*EKHSGCYSQSSCCP
Trigger: TGGACAGCAGGATGATTGAGAATAACAACCTGAGTGCTTCTCCCAGGGCGTGGTCCAGACGATTTTGTTTGAGGGGAAGAGATGCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS CCA 90 bp CGCTGTGACTTCGAATTGCATCTCTTCCCCTCAAACAAAATCGTCTaGACCACGCCCTGGGAGAAGCACTCAGGTTGTTATTCTCAATCA +
Preference number: 5 (lower is better)
Translates to: RCDFELHLFPSNKIV*TTPWEKHSGCYSQS
Trigger: TGATTGAGAATAACAACCTGAGTGCTTCTCCCAGGGCGTGGTCCAGACGATTTTGTTTGAGGGGAAGAGATGCAATTCGAAGTCACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS-3UTR CAA 90 bp CCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTATTCCATTTCGCACATaGACCACTGTTCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSALPGKPSQCTGHLRSCIPFRT*TTVLCL
Trigger: CAAGCAAAGAACAGTGGTCAATGTGCGAAATGGAAT...ACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACGTCACAATTGCCAGGTaGTCCTTTGTCATGTACCCC +
Preference number: 5 (lower is better)
Translates to: IRAGLPATLLPLNTHVANVTIAR*SFVMYP
Trigger: GGGGTACATGACAAAGGACAACCTGGCAATTGTGAC...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGTCACAATTGCCAGGTaGTCCTTTGTCATGTACCCC +
Preference number: 5 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASVTIAR*SFVMYP
Trigger: GGGGTACATGACAAAGGACAACCTGGCAATTGTGAC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACGCAGTCCTGGGCTGTTaGGTGCCTTATGTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: IRAGLPATLLPLNTHVANAVLGC*VPYVQN
Trigger: ATTTTGCACATAAGGCACCAAACAGCCCAGGACTGC...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTCCTGTATGTGCTCCATaGATGCAGCTTAAACAATTC +
Preference number: 5 (lower is better)
Translates to: GNMKLRPCEQSRRSLAAAPVCAP*MQLKQF
Trigger: GAATTGTTTAAGCTGCATCAATGGAGCACATACAGG...AGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR CAA 90 bp CCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGTTGAATCCAAAACCATaGCTGATCGTCTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PRAQRDRKEGNMKLRPCELNPKP*LIVFQA
Trigger: AGCTTGGAAGACGATCAGCAATGGTTTTGGATTCAA...CTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTTGGAAACTGAATGGGTaGTTATCCTGCATTCGGATC +
Preference number: 5 (lower is better)
Translates to: RPCEQSRRSLAAASLKTCWKLNG*LSCIRI
Trigger: GATCCGAATGCAGGATAACAACCCATTCAGTTTCCA...ACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS TCA 90 bp GATAGTGTTGCTTGTCTTAGAAGGATCTGTGAGTTTGCCATCATCTaGTGCCCGGCGCTGATAGCCAAACTGCTGAACTATTGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: DSVACLRRICEFAII*CPALIAKLLNYCRR
Trigger: TCTCCTACAATAGTTCAGCAGTTTGGCTATCAGCGCCGGGCATCAGATGATGGCAAACTCACAGATCCTTCTAAGACAAGCAACACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000416093.1
ENST00000423275.5
ENST00000442415.7
CDS-3UTR CAA 90 bp AAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTGAAGGATCTGTGAGTTaGCCATCATCTGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: KELSDVTPVHTHSRYFGAEGSVS*PSSDAR
Trigger: CCGGGCATCAGATGATGGCAAACTCACAGATCCTTC...AGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR CAA 90 bp GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGAAAACACGGATAGTGTaGCTTGTCTTAGAAGGATCT +
Preference number: 5 (lower is better)
Translates to: ALPGKPSQCTGHLRSCERKTRIV*LVLEGS
Trigger: AGATCCTTCTAAGACAAGCAACACTATCCGTGTTTT...CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp GAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCATTTCCCAATAATAGCTaGAATCTCTCTGTCCACGAG +
Preference number: 5 (lower is better)
Translates to: EGNMKLRPCEQSRRSLAAFPNNS*NLSVHE
Trigger: CTCGTGGACAGAGAGATTCAAGCTATTATTGGGAAA...TGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTTGCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGGAAACTGAATGGGTaGTTATCCTGCATTCGGATC +
Preference number: 5 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTWKLNG*LSCIRI
Trigger: GATCCGAATGCAGGATAACAACCCATTCAGTTTCCA...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACTGGAAACTGAATGGGTaGTTATCCTGCATTCGGATC +
Preference number: 5 (lower is better)
Translates to: IRAGLPATLLPLNTHVANWKLNG*LSCIRI
Trigger: GATCCGAATGCAGGATAACAACCCATTCAGTTTCCA...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp TCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGTATTCCTGGCTTCCTaGTATACACATGATGTGACT +
Preference number: 5 (lower is better)
Translates to: SPRAQRDRKEGNMKLRPCVFLAS*YTHDVT
Trigger: AGTCACATCATGTGTATACAAGGAAGCCAGGAATAC...ACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS-3UTR CAA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTGTGCTGAGAAAAGAGTaGTCTGATGTTACTCCAGTC +
Preference number: 5 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASVLRKE*SDVTPV
Trigger: GACTGGAGTAACATCAGACAACTCTTTTCTCAGCAC...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432427.2
CDS CCA 90 bp TCACACAAACCAAGAAGGTACAGCCTTCTACACACCCTGGCTAAATaGTATAACGTGTTGCACTTAGGCTACAAAACTGTATGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: SHKPRRYSLLHTLAK*YNVLHLGYKTVWPS
Trigger: TGAGGGCCATACAGTTTTGTAGCCTAAGTGCAACACGTTATACCATTTAGCCAGGGTGTGTAGAAGGCTGTACCTTCTTGGTTTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS-3UTR CAA 90 bp TTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACACCTGTATGTGCTCCATaGATGCAGCTTAAACAATTC +
Preference number: 5 (lower is better)
Translates to: LRPCEQSRRSLAAASLKTPVCAP*MQLKQF
Trigger: GAATTGTTTAAGCTGCATCAATGGAGCACATACAGG...TGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000442415.7
CDS-3UTR CAA 90 bp AACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTTTTCCCAATAATAGCTaGAATCTCTCTGTCCACGAG +
Preference number: 5 (lower is better)
Translates to: NMKLRPCEQSRRSLAAASFPNNS*NLSVHE
Trigger: CTCGTGGACAGAGAGATTCAAGCTATTATTGGGAAA...AGAAGCTGCTGCTAAGGACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000423275.5
ENST00000432427.2
ENST00000442415.7
CDS-3UTR CAA 90 bp GTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCTGGAAACTGAATGGGTaGTTATCCTGCATTCGGATC +
Preference number: 5 (lower is better)
Translates to: VTCIPPEADFQNPMCLHIWKLNG*LSCIRI
Trigger: GATCCGAATGCAGGATAACAACCCATTCAGTTTCCA...GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS TCA 90 bp AAATGCTTGGATTACAGGCATGGGCCCCTGGCGCCTGACCATTGCTaGCACTTCTTCAAGCATCAGTTTTACTCTAAAGTAATTCTGATA +
Preference number: 5 (lower is better)
Translates to: KCLDYRHGPLAPDHC*HFFKHQFYSKVILI
Trigger: TATCAGAATTACTTTAGAGTAAAACTGATGCTTGAAGAAGTGTCAGCAATGGTCAGGCGCCAGGGGCCCATGCCTGTAATCCAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS-3UTR CAA 90 bp ATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCTAAATACTCATGTAGCCAACAAAACACGGATAGTGTaGCTTGTCTTAGAAGGATCT +
Preference number: 5 (lower is better)
Translates to: IRAGLPATLLPLNTHVANKTRIV*LVLEGS
Trigger: AGATCCTTCTAAGACAAGCAACACTATCCGTGTTTT...GTTGGCTACATGAGTATTTAGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251849.9
ENST00000442415.7
CDS TCA 90 bp TGCAAAGATATCACAGAATCGCTTAATGGACTAGAAGGCTTTTCCTaGTCCTGGTTCCAATTTAGGGACAAATTTGATGCCTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: CKDITESLNGLEGFS*SWFQFRDKFDAWVP
Trigger: TGGGACCCAGGCATCAAATTTGTCCCTAAATTGGAACCAGGATCAGGAAAAGCCTTCTAGTCCATTAAGCGATTCTGTGATATCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460610.1
ENST00000494557.1
CDS TCA 90 bp AACTCAACAACCAAAGGATACTGTTGGATTTCATGTCTCTATGGATaGTGTTCTTTGCATGCAAATAGTCCATTCCCTGAGCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: NSTTKGYCWISCLYG*CSLHANSPFPEPSA
Trigger: GGCAGACGGCTCAGGGAATGGACTATTTGCATGCAAAGAACATCATCCATAGAGACATGAAATCCAACAGTATCCTTTGGTTGTTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465826.5
CDS-3UTR CAA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACACCTGTATGTGCTCCATaGATGCAGCTTAAACAATTC +
Preference number: 5 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTPVCAP*MQLKQF
Trigger: GAATTGTTTAAGCTGCATCAATGGAGCACATACAGG...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS-3UTR CAA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGTCAAACACGGCATCTTaGAATCCAAAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQSNTAS*NPKPLL
Trigger: CAGCAATGGTTTTGGATTCAAAGATGCCGTGTTTGA...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS-3UTR CAA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACATTTCCCAATAATAGCTaGAATCTCTCTGTCCACGAG +
Preference number: 5 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTFPNNS*NLSVHE
Trigger: CTCGTGGACAGAGAGATTCAAGCTATTATTGGGAAA...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423275.5
CDS-3UTR CAA 90 bp AAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTGTGCTGAGAAAAGAGTaGTCTGATGTTACTCCAGTC +
Preference number: 5 (lower is better)
Translates to: KELSDVTPVHTHSRYFGAVLRKE*SDVTPV
Trigger: GACTGGAGTAACATCAGACAACTCTTTTCTCAGCAC...AGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR CAA 90 bp GAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCCTGTATGTGCTCCATaGATGCAGCTTAAACAATTC +
Preference number: 5 (lower is better)
Translates to: EKSCLMLLQSTHIVGTLVPVCAP*MQLKQF
Trigger: GAATTGTTTAAGCTGCATCAATGGAGCACATACAGG...CACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR CAA 90 bp TCTGTGCTGAGAAAAGAGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGAAAACACGGATAGTGTaGCTTGTCTTAGAAGGATCT +
Preference number: 5 (lower is better)
Translates to: SVLRKELSDVTPVHTHSRKTRIV*LVLEGS
Trigger: AGATCCTTCTAAGACAAGCAACACTATCCGTGTTTT...CCTACTATGTGTGTGGACTGGAGTAACATCAGACAACTCTTTTCTCAGCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416093.1
CDS-3UTR CAA 90 bp GCCACAAGTCTGACATCGAAATCCATTGAGCAGGAATTTCTGACAGATGTCACAAAAACACGGATAGTGTaGCTTGTCTTAGAAGGATCT +
Preference number: 5 (lower is better)
Translates to: ATSLTSKSIEQEFLTDVTKTRIV*LVLEGS
Trigger: AGATCCTTCTAAGACAAGCAACACTATCCGTGTTTT...TGTGACATCTGTCAGAAATTCCTGCTCAATGGATTTCGATGTCAGACTTGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS TCA 90 bp CTCCTTTCCTTACTGAATCACAGTCACAGTATGTCAATCTCAATTTaGCAGATAACAAGTCCTACTCCTACCTGCTCATTCTGGAGTATG +
Preference number: 5 (lower is better)
Translates to: LLSLLNHSHSMSISI*QITSPTPTCSFWSM
Trigger: CATACTCCAGAATGAGCAGGTAGGAGTAGGACTTGTTATCTGTCAAATTGAGATTGACATACTGTGACTGTGATTCAGTAAGGAAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492690.1
CDS GCA 90 bp CAGGGATACCTTCTGAGAAATGTGTTGTTAGCCAACTTGTCATCATaGACACATCATAAAGTGTATTCACACAAACCAAGAAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: QGYLLRNVLLANLSS*THHKVYSHKPRRYS
Trigger: GCTGTACCTTCTTGGTTTGTGTGAATACACTTTATGATGTGTGCATGATGACAAGTTGGCTAACAACACATTTCTCAGAAGGTATCCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS-3UTR CAA 90 bp AGTTGTCTGATGTTACTCCAGTCCACACACATAGTAGGTACTTTGGTGCTACAGTTTTTACACTGTTCTTaGCTTGTTCGGCAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: SCLMLLQSTHIVGTLVLQFLHCS*LVRQEN
Trigger: GTTTTCTTGCCGAACAAGCAAAGAACAGTGTAAAAA...CTGTAGCACCAAAGTACCTACTATGTGTGTGGACTGGAGTAACATCAGACAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416093.1
ENST00000423275.5
CDS TCA 90 bp TATGCCTATTTCAAGCTTACGGAAATCTCTCCAAATCACTTTTGCTaGGATAAACTCAGAAAGGAACCTAACCTAAACATCGCTCTCATC +
Preference number: 5 (lower is better)
Translates to: YAYFKLTEISPNHFC*DKLRKEPNLNIALI
Trigger: GATGAGAGCGATGTTTAGGTTAGGTTCCTTTCTGAGTTTATCTCAGCAAAAGTGATTTGGAGAGATTTCCGTAAGCTTGAAATAGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465826.5
CDS TCA 90 bp GTGGCATATCCATACAATGGAATGTTACTCAGACACAGAAAGGAATaGAGTAGTGACTCATGCTACACATTAACCTTGAAAATACTATGC +
Preference number: 5 (lower is better)
Translates to: VAYPYNGMLLRHRKE*SSDSCYTLTLKILC
Trigger: GCATAGTATTTTCAAGGTTAATGTGTAGCATGAGTCACTACTTCATTCCTTTCTGTGTCTGAGTAACATTCCATTGTATGGATATGCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CCA 72 bp GTGGGACCTAAGTGGCAGGTGTTTGGGTCATGGGGATaGATTCCTCACAAACGGCTCGGTGGCCTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: VGPKWQVFGSWG*IPHKRLGGLPA
Trigger: TGCAGGGAGGCCACCGAGCCGTTTGTGAGGAATCCATCCCCATGACCCAAACACCTGCCACTTAGGTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS GCA 72 bp GGACAGCCATGCCTCAGACAGCTGAGCAGAAGGCATTaGCACAGCTGTCCAAGCAGAAGGTACATGCACCCC +
Preference number: 6 (lower is better)
Translates to: GQPCLRQLSRRH*HSCPSRRYMHP
Trigger: GGGGTGCATGTACCTTCTGCTTGGACAGCTGTGGCAATGCCTTCTGCTCAGCTGTCTGAGGCATGGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 72 bp CCCCAGTGTTGGAGGTGGGACCTAAGTGGCAGGTGTTaGGGTCATGGGGATGGATTCCTCACAAACGGCTCG +
Preference number: 6 (lower is better)
Translates to: PQCWRWDLSGRC*GHGDGFLTNGS
Trigger: CGAGCCGTTTGTGAGGAATCCATCCCCATGACCCAAACACCTGCCACTTAGGTCCCACCTCCAACACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 90 bp TCTCTCTCTTGCTCCTTTCTCTCACCACATCACACGTGGCTCCCCTaGCCTTCTGCCATGAGTGAAAGCTTCCTGAGGGCCTCACCAGAC +
Preference number: 6 (lower is better)
Translates to: SLSCSFLSPHHTWLP*PSAMSESFLRASPD
Trigger: GTCTGGTGAGGCCCTCAGGAAGCTTTCACTCATGGCAGAAGGCAAGGGGAGCCACGTGTGATGTGGTGAGAGAAAGGAGCAAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CCA 72 bp GGGTCTTGCACTGTTGCCCAAGCTGGTCTTGACTCCTaGGCTCAAGTGATCCTCCCATGTTGGCCTCCAAAA +
Preference number: 6 (lower is better)
Translates to: GSCTVAQAGLDS*AQVILPCWPPK
Trigger: TTTTGGAGGCCAACATGGGAGGATCACTTGAGCCCAGGAGTCAAGACCAGCTTGGGCAACAGTGCAAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 90 bp CCCTCATGTGGGACAGCCATGCCTCAGACAGCTGAGCAGAAGGCATaGCCACAGCTGTCCAAGCAGAAGGTACATGCACCCCACTATATT +
Preference number: 6 (lower is better)
Translates to: PSCGTAMPQTAEQKA*PQLSKQKVHAPHYI
Trigger: AATATAGTGGGGTGCATGTACCTTCTGCTTGGACAGCTGTGGCAATGCCTTCTGCTCAGCTGTCTGAGGCATGGCTGTCCCACATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CCA 72 bp TTTTCGGCTGTGACCAGCCTGTTGGGCTCAGATTGTTaGGGCTACTGGACAGGGCTGAAGGTGAGGCTTAAT +
Preference number: 6 (lower is better)
Translates to: FSAVTSLLGSDC*GYWTGLKVRLN
Trigger: ATTAAGCCTCACCTTCAGCCCTGTCCAGTAGCCCCAACAATCTGAGCCCAACAGGCTGGTCACAGCCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491290.1
CDS CCA 72 bp TCTCTCTCTTGCTCCTTTCTCTCACCACATCACACGTaGCTCCCCTTGCCTTCTGCCATGAGTGAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: SLSCSFLSPHHT*LPLPSAMSESF
Trigger: GAAGCTTTCACTCATGGCAGAAGGCAAGGGGAGCCACGTGTGATGTGGTGAGAGAAAGGAGCAAGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 72 bp GGGCCTCACCAGACACAGATGCTGGTGTCATGCTTTTaGTACAGTCTGCAGAACCCCGAGTCAAATAAACCT +
Preference number: 6 (lower is better)
Translates to: GPHQTQMLVSCF*YSLQNPESNKP
Trigger: AGGTTTATTTGACTCGGGGTTCTGCAGACTGTACAAAAAGCATGACACCAGCATCTGTGTCTGGTGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS TCA 72 bp GCTTGTCTTAGAAGGATCTGTGAGTTTGCCATCATCTaGTGCCCGGCGCTGATAGCCAAACTGCTGAACTAT +
Preference number: 6 (lower is better)
Translates to: ACLRRICEFAII*CPALIAKLLNY
Trigger: ATAGTTCAGCAGTTTGGCTATCAGCGCCGGGCATCAGATGATGGCAAACTCACAGATCCTTCTAAGACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000416093.1
ENST00000423275.5
ENST00000442415.7
CDS TCA 72 bp TGGATATCTGTCCACTCCAAATCTCAAGTTGAAATGTaGTCCCCAGTGTTGGAGGTGGGACCTAAGTGGCAG +
Preference number: 6 (lower is better)
Translates to: WISVHSKSQVEM*SPVLEVGPKWQ
Trigger: CTGCCACTTAGGTCCCACCTCCAACACTGGGGATCACATTTCAACTTGAGATTTGGAGTGGACAGATATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS TCA 72 bp GATTACAGGCATGGGCCCCTGGCGCCTGACCATTGCTaGCACTTCTTCAAGCATCAGTTTTACTCTAAAGTA +
Preference number: 6 (lower is better)
Translates to: DYRHGPLAPDHC*HFFKHQFYSKV
Trigger: TACTTTAGAGTAAAACTGATGCTTGAAGAAGTGTCAGCAATGGTCAGGCGCCAGGGGCCCATGCCTGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CCA 72 bp TTCGAATTGCATCTCTTCCCCTCAAACAAAATCGTCTaGACCACGCCCTGGGAGAAGCACTCAGGTTGTTAT +
Preference number: 6 (lower is better)
Translates to: FELHLFPSNKIV*TTPWEKHSGCY
Trigger: ATAACAACCTGAGTGCTTCTCCCAGGGCGTGGTCCAGACGATTTTGTTTGAGGGGAAGAGATGCAATTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442415.7
CDS CCA 72 bp ACTCCAAATCTCAAGTTGAAATGTGATCCCCAGTGTTaGAGGTGGGACCTAAGTGGCAGGTGTTTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: TPNLKLKCDPQC*RWDLSGRCLGH
Trigger: ATGACCCAAACACCTGCCACTTAGGTCCCACCTCCAACACTGGGGATCACATTTCAACTTGAGATTTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 72 bp GCTTTTCCTGATCCTGGTTCCAATTTAGGGACAAATTaGATGCCTGGGTCCCAGAGAGGCATCAGACCATCT +
Preference number: 6 (lower is better)
Translates to: AFPDPGSNLGTN*MPGSQRGIRPS
Trigger: AGATGGTCTGATGCCTCTCTGGGACCCAGGCATCAAATTTGTCCCTAAATTGGAACCAGGATCAGGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460610.1
ENST00000494557.1
CDS CCA 72 bp CGAGTGAGTTCACACACTATTAGCTCACATGAAACCTaGTTATTAAAGAGTCTGGGACCTCCCTCCATGCTC +
Preference number: 6 (lower is better)
Translates to: RVSSHTISSHET*LLKSLGPPSML
Trigger: GAGCATGGAGGGAGGTCCCAGACTCTTTAATAACCAGGTTTCATGTGAGCTAATAGTGTGTGAACTCACTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CCA 72 bp CCAAGAAGGTACAGCCTTCTACACACCCTGGCTAAATaGTATAACGTGTTGCACTTAGGCTACAAAACTGTA +
Preference number: 6 (lower is better)
Translates to: PRRYSLLHTLAK*YNVLHLGYKTV
Trigger: TACAGTTTTGTAGCCTAAGTGCAACACGTTATACCATTTAGCCAGGGTGTGTAGAAGGCTGTACCTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 72 bp GTTCTTTGCTTGTTCGGCAAGAAAACACGGATAGTGTaGCTTGTCTTAGAAGGATCTGTGAGTTTGCCATCA +
Preference number: 6 (lower is better)
Translates to: VLCLFGKKTRIV*LVLEGSVSLPS
Trigger: TGATGGCAAACTCACAGATCCTTCTAAGACAAGCAACACTATCCGTGTTTTCTTGCCGAACAAGCAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251849.9
ENST00000416093.1
ENST00000423275.5
ENST00000442415.7
CDS CAA 72 bp ATATTGTTTGGATATCTGTCCACTCCAAATCTCAAGTaGAAATGTGATCCCCAGTGTTGGAGGTGGGACCTA +
Preference number: 6 (lower is better)
Translates to: ILFGYLSTPNLK*KCDPQCWRWDL
Trigger: TAGGTCCCACCTCCAACACTGGGGATCACATTTCAACTTGAGATTTGGAGTGGACAGATATCCAAACAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS TCA 72 bp ATCACAGAATCGCTTAATGGACTAGAAGGCTTTTCCTaGTCCTGGTTCCAATTTAGGGACAAATTTGATGCC +
Preference number: 6 (lower is better)
Translates to: ITESLNGLEGFS*SWFQFRDKFDA
Trigger: GGCATCAAATTTGTCCCTAAATTGGAACCAGGATCAGGAAAAGCCTTCTAGTCCATTAAGCGATTCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460610.1
ENST00000494557.1
CDS CCA 72 bp GAAACAGAAAGTAGACTGCAAGTGGGTGGGAGGTATTaGGTAACCTCTAATGGGTATATTGTTTGGATATCT +
Preference number: 6 (lower is better)
Translates to: ETESRLQVGGRY*VTSNGYIVWIS
Trigger: AGATATCCAAACAATATACCCATTAGAGGTTACCCAATACCTCCCACCCACTTGCAGTCTACTTTCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 90 bp GCTCCTTTCCTTACTGAATCACAGTCACAGTATGTCAATCTCAATTaGACAGATAACAAGTCCTACTCCTACCTGCTCATTCTGGAGTAT +
Preference number: 6 (lower is better)
Translates to: APFLTESQSQYVNLN*TDNKSYSYLLILEY
Trigger: ATACTCCAGAATGAGCAGGTAGGAGTAGGACTTGTTATCTGTCAAATTGAGATTGACATACTGTGACTGTGATTCAGTAAGGAAAGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492690.1
CDS TCA 72 bp ACCAAAGGATACTGTTGGATTTCATGTCTCTATGGATaGTGTTCTTTGCATGCAAATAGTCCATTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: TKGYCWISCLYG*CSLHANSPFPE
Trigger: CTCAGGGAATGGACTATTTGCATGCAAAGAACATCATCCATAGAGACATGAAATCCAACAGTATCCTTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465826.5
ENST00000475353.1
CDS CCA 72 bp GGGAGGTATTGGGTAACCTCTAATGGGTATATTGTTTaGATATCTGTCCACTCCAAATCTCAAGTTGAAATG +
Preference number: 6 (lower is better)
Translates to: GRYWVTSNGYIV*ISVHSKSQVEM
Trigger: CATTTCAACTTGAGATTTGGAGTGGACAGATATCCAAACAATATACCCATTAGAGGTTACCCAATACCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS CAA 72 bp CAGGGATACCTTCTGAGAAATGTGTTGTTAGCCAACTaGTCATCATGCACACATCATAAAGTGTATTCACAC +
Preference number: 6 (lower is better)
Translates to: QGYLLRNVLLAN*SSCTHHKVYSH
Trigger: GTGTGAATACACTTTATGATGTGTGCATGATGACAAGTTGGCTAACAACACATTTCTCAGAAGGTATCCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS TCA 72 bp TTACTGAATCACAGTCACAGTATGTCAATCTCAATTTaGCAGATAACAAGTCCTACTCCTACCTGCTCATTC +
Preference number: 6 (lower is better)
Translates to: LLNHSHSMSISI*QITSPTPTCSF
Trigger: GAATGAGCAGGTAGGAGTAGGACTTGTTATCTGTCAAATTGAGATTGACATACTGTGACTGTGATTCAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492690.1
CDS GCA 72 bp TTTTGGAAACCTTTCAACATTTGGCTTGTAGCTACTTaGTATCCACATAACAAGCAGATAGACATACACACG +
Preference number: 6 (lower is better)
Translates to: FWKPFNIWLVAT*YPHNKQIDIHT
Trigger: CGTGTGTATGTCTATCTGCTTGTTATGTGGATAGCAAGTAGCTACAAGCCAAATGTTGAAAGGTTTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465826.5
CDS CAA 72 bp CTTACTGAATCACAGTCACAGTATGTCAATCTCAATTaGACAGATAACAAGTCCTACTCCTACCTGCTCATT +
Preference number: 6 (lower is better)
Translates to: LTESQSQYVNLN*TDNKSYSYLLI
Trigger: AATGAGCAGGTAGGAGTAGGACTTGTTATCTGTCAAATTGAGATTGACATACTGTGACTGTGATTCAGTAAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492690.1
CDS TCA 72 bp TTCAAGCTTACGGAAATCTCTCCAAATCACTTTTGCTaGGATAAACTCAGAAAGGAACCTAACCTAAACATC +
Preference number: 6 (lower is better)
Translates to: FKLTEISPNHFC*DKLRKEPNLNI
Trigger: GATGTTTAGGTTAGGTTCCTTTCTGAGTTTATCTCAGCAAAAGTGATTTGGAGAGATTTCCGTAAGCTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465826.5
CDS TCA 72 bp CCATACAATGGAATGTTACTCAGACACAGAAAGGAATaGAGTAGTGACTCATGCTACACATTAACCTTGAAA +
Preference number: 6 (lower is better)
Translates to: PYNGMLLRHRKE*SSDSCYTLTLK
Trigger: TTTCAAGGTTAATGTGTAGCATGAGTCACTACTTCATTCCTTTCTGTGTCTGAGTAACATTCCATTGTATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1
CDS GCA 72 bp CTTCTGAGAAATGTGTTGTTAGCCAACTTGTCATCATaGACACATCATAAAGTGTATTCACACAAACCAAGA +
Preference number: 6 (lower is better)
Translates to: LLRNVLLANLSS*THHKVYSHKPR
Trigger: TCTTGGTTTGTGTGAATACACTTTATGATGTGTGCATGATGACAAGTTGGCTAACAACACATTTCTCAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494557.1