RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAET1E (Homo sapiens)

Ensembl gene IDs: ENSG00000164520

Ensembl transcript IDs: ENST00000357183.8, ENST00000367363.3, ENST00000392270.3, ENST00000524905.1, ENST00000529948.1, ENST00000531073.1, ENST00000532335.5

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCTGTTGCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTaGAGGCTCCGCCTCCACTTGACTCAGGGAACACACAGCAGTGGG +
Preference number: 1 (lower is better)
Translates to: ALLPRLECRGAISAH*RLRLHLTQGTHSSG
Trigger: CCCACTGCTGTGTGTTCCCTGAGTCAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGCAACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR CCA 90 bp TCTTCTCTCCCTCTCACACATAGAGGAGGGGGTGTTAGAACCAGGTaGGCTGGTGGTAGGATCATAGGTCCACAATCTCACGAGCAAAGG +
Preference number: 1 (lower is better)
Translates to: SSLPLTHRGGGVRTR*AGGRIIGPQSHEQR
Trigger: CCTTTGCTCGTGAGATTGTGGACCTATGATCCTACCACCAGCCCACCTGGTTCTAACACCCCCTCCTCTATGTGTGAGAGGGAGAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR TCA 90 bp TGGGATGGGAAAGGGAGGATGGTGGGAAATCCTTATAGCCATCACTaGCTCTCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTC +
Preference number: 1 (lower is better)
Translates to: WDGKGRMVGNPYSHH*LSRQEAHGEVNQIF
Trigger: GAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGAGAGTCAGTGATGGCTATAAGGATTTCCCACCATCCTCCCTTTCCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
3UTR CCA 90 bp GCCCCCAGGATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGTaGATATCTGAAGCATTTACTGGTGACACTGTCGGTTCTGGCATT +
Preference number: 1 (lower is better)
Translates to: APRMIHLSGRLEEDQ*ISEAFTGDTVGSGI
Trigger: AATGCCAGAACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACTGGTCTTCTTCTAGTCTACCAGATAGATGGATCATCCTGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR-3UTR GCA 90 bp GCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCAACAGGTGAACAACTCTaGGCCGCCGTGGTATCACCT +
Preference number: 2 (lower is better)
Translates to: AKTGMQRRDLRSLQAPPPTGEQL*AAVVSP
Trigger: AGGTGATACCACGGCGGCGCAGAGTTGTTCACCTGT...TGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR CCA 90 bp CTCTGTTGCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGGGAACACACAGCAGTaGGAGCCAAGGCTGTCAGCG +
Preference number: 2 (lower is better)
Translates to: LCCQDWNAEARSPLIAGSGNTQQ*EPRLSA
Trigger: CGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCC...GGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGCAACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR CAA 90 bp TGCTCTGTTGCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATaGCAGGCTCCGCCTCCACTTGACTCAGGGAACACACAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: CSVAKTGMQRRDLRS*QAPPPLDSGNTQQW
Trigger: CCACTGCTGTGTGTTCCCTGAGTCAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGCAACAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR TCA 90 bp TCTGAAGCATTTACTGGTGACACTGTCGGTTCTGGCATTGCCTCCCAGTGCCCTAATTCCCTGAGCCAGTaGTCGCAGTCTCCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: SEAFTGDTVGSGIASQCPNSLSQ*SQSPFE
Trigger: CTCAAAGGGAGACTGCGATCACTGGCTCAGGGAATT...AGGGCACTGGGAGGCAATGCCAGAACCGACAGTGTCACCAGTAAATGCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR-3UTR TCA 90 bp ACTAAGACGTCCTCAAGGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCATCTTACTGGCTTCATaGTTAATTACTGTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: TKTSSRARDQPATHHFATILLAS*LITVQV
Trigger: GACCTGGACAGTAATTAATCATGAAGCCAGTAAGAT...GGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGAGGACGTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR-3UTR GCA 90 bp GAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACCTTTAAAGGGAGCTaGCACATTCTCCCACCCAGC +
Preference number: 2 (lower is better)
Translates to: EAHGEVNQIFYRTHTLTPTFKGS*HILPPS
Trigger: GCTGGGTGGGAGAATGTGGCAGCTCCCTTTAAAGGT...GGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
3UTR-3UTR TCA 90 bp CAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACACAGGGAAGGCTTTTaGCCTTTAAAGGGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: QEAHGEVNQIFYRTHTLTHREGF*PLKGAA
Trigger: GGCAGCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTG...TGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
3UTR-3UTR TCA 90 bp AGGATGAATGCCCCCAGGATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGCCTTTGAGAGCTTCCTaGAATACTTTTCCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: RMNAPRMIHLSGRLEEDQPLRAS*NTFPAL
Trigger: GAGGGCTGGAAAAGTATTTCAGGAAGCTCTCAAAGG...CTGGTCTTCTTCTAGTCTACCAGATAGATGGATCATCCTGGGGGCATTCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR-3UTR TCA 90 bp TCTGGTAGACTAGAAGAAGACCAGTGGATATCTGAAGCATTTACTGGTGACACTGCCCTAAGAATTCCCTaGGCCAGTGATCGCAGTCTC +
Preference number: 2 (lower is better)
Translates to: SGRLEEDQWISEAFTGDTALRIP*ASDRSL
Trigger: GAGACTGCGATCACTGGCTCAGGGAATTCTTAGGGC...AGTGTCACCAGTAAATGCTTCAGATATCCACTGGTCTTCTTCTAGTCTACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR-3UTR GCA 90 bp ACAATCTCACGAGCAAAGGCTCACTGCAGCTTCAGATTCCTGGGCTCAAGTGATAGATGTGAGCTGCTGTaGCCAGCCCTATCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: TISRAKAHCSFRFLGSSDRCELL*PALSFK
Trigger: TTTAAAAGATAGGGCTGGGCACAGCAGCTCACATCT...ATCACTTGAGCCCAGGAATCTGAAGCTGCAGTGAGCCTTTGCTCGTGAGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR TCA 90 bp ACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACTTTATTCCAATGCAGGCTCCGCCTCCACTTaGCTCAGGGAACACACAGCA +
Preference number: 2 (lower is better)
Translates to: TVSSAISGCLKTVLYSNAGSAST*LREHTA
Trigger: TGCTGTGTGTTCCCTGAGTCAAGTGGAGGCGGAGCC...TGCATTGGAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR TCA 90 bp CTGTGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACATCGAGGACCACAGGTaGACAACTCTGCGCCGCCGT +
Preference number: 2 (lower is better)
Translates to: LCSHNLYSQFCYIRLFENIEDHR*TTLRRR
Trigger: ACGGCGGCGCAGAGTTGTTCACCTGTGGTCCTCGAT...GTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR GCA 90 bp TGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTCGAGCAAAGGCTCACTaGAGCTTCAGATTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: CSHNLYSQFCYIRLFENRRAKAH*SFRFLG
Trigger: GCCCAGGAATCTGAAGCTGCAGTGAGCCTTTGCTCG...ACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR TCA 90 bp AGAACAATTCCCATTAAAACTAACAGGATGAATGCCCCCAGGATGATCCATCTATCTTCCATGTCTCCTTaGTCTTACTGGCTTCATGAT +
Preference number: 2 (lower is better)
Translates to: RTIPIKTNRMNAPRMIHLSSMSP*SYWLHD
Trigger: ATCATGAAGCCAGTAAGATCAAGGAGACATGGAAGA...TAGATGGATCATCCTGGGGGCATTCATCCTGTTAGTTTTAATGGGAATTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR-3UTR TCA 90 bp CTGTGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACGTCTGTGAGAAATGGTaGATGCAGAAAACTGCCTCA +
Preference number: 2 (lower is better)
Translates to: LCSHNLYSQFCYIRLFENVCEKW*MQKTAS
Trigger: TGAGGCAGTTTTCTGCATTCACCATTTCTCACAGAC...GTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR GCA 90 bp CTGTGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACGTGAATGCAGAAAACTaGCTCACAAATGATTATACT +
Preference number: 2 (lower is better)
Translates to: LCSHNLYSQFCYIRLFENVNAEN*LTNDYT
Trigger: AGTATAATCATTTGTGAGGCAGTTTTCTGCATTCAC...GTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR CCA 72 bp GCTCCGCCTCCACTTGACTCAGGGAACACACAGCAGTaGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGG +
Preference number: 3 (lower is better)
Translates to: APPPLDSGNTQQ*EPRLSAIEDHR
Trigger: CCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCCTGAGTCAAGTGGAGGCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR GCA 72 bp CCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTaGAGGCTCCGCCTCCACTTGACTCAGGGAACACAC +
Preference number: 3 (lower is better)
Translates to: PRLECRGAISAH*RLRLHLTQGTH
Trigger: GTGTGTTCCCTGAGTCAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR-3UTR CAA 90 bp AAGACGTCCTCAAGGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGACTGTCGGTTCTGGCATaGCCTCCCAGTGCCCTAAGA +
Preference number: 3 (lower is better)
Translates to: KTSSRARDQPATHHFATRLSVLA*PPSALR
Trigger: TCTTAGGGCACTGGGAGGCAATGCCAGAACCGACAG...TCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGAGGACGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR TCA 72 bp AAAGGGAGGATGGTGGGAAATCCTTATAGCCATCACTaGCTCTCCAGACAGGAAGCCCACGGAGAAGTCAAT +
Preference number: 3 (lower is better)
Translates to: KGRMVGNPYSHH*LSRQEAHGEVN
Trigger: ATTGACTTCTCCGTGGGCTTCCTGTCTGGAGAGTCAGTGATGGCTATAAGGATTTCCCACCATCCTCCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529948.1
3UTR-3UTR CAA 90 bp TCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACAACACAGGGAAGGCTTTaGACCTTTAAAGGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: SRQEAHGEVNQIFYRTHTTQGRL*TFKGSC
Trigger: GCAGCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTGT...TGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
3UTR CCA 72 bp ATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGTaGATATCTGAAGCATTTACTGGTGACACTGTCGGT +
Preference number: 3 (lower is better)
Translates to: MIHLSGRLEEDQ*ISEAFTGDTVG
Trigger: ACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACTGGTCTTCTTCTAGTCTACCAGATAGATGGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392270.3
3UTR GCA 72 bp CTTGCACTGTGCTCACATAATTTATACAGTCAGTTCTaGTATATCAGGTTGTTTGAAAACCGTACTTTATTC +
Preference number: 3 (lower is better)
Translates to: LALCSHNLYSQF*YIRLFENRTLF
Trigger: GAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAGTGCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
3UTR TCA 72 bp GCAAATGATGTATTAGGGAAGAATTTCAGTGTAATGTaGATTGCACGTTTGCTTATGAGTAACTTAGTCTGT +
Preference number: 3 (lower is better)
Translates to: ANDVLGKNFSVM*IARLLMSNLVC
Trigger: ACAGACTAAGTTACTCATAAGCAAACGTGCAATTCACATTACACTGAAATTCTTCCCTAATACATCATTTGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp GCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCACCATTGGTGGCGAACTaGCAGGATGCACCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: AKTGMQRRDLRSLQAPPPPLVAN*QDAPVH
Trigger: GTGCACTGGTGCATCCTGGCAGTTCGCCACCAATGG...TGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp GTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTGCGCCGGCCCTAAGAATTCCCTaGGCCAGTGATCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VGAKAVSDRGPQVNNSAPALRIP*ASDRSL
Trigger: GAGACTGCGATCACTGGCTCAGGGAATTCTTAGGGC...CGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp CACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCATCGAGGACCACAGGTaGACAACTCTGCGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: HSSGSQGCQRSRTTGEQLIEDHR*TTLRRR
Trigger: ACGGCGGCGCAGAGTTGTTCACCTGTGGTCCTCGAT...GAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp CACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCGGCGAACTGCCAGGATaGACCAGTGCACCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HSSGSQGCQRSRTTGEQLGELPG*TSAPFC
Trigger: GCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCC...GAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp CACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCGGGAACACACAGCAGTaGGAGCCAAGGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: HSSGSQGCQRSRTTGEQLGNTQQ*EPRLSA
Trigger: CGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCC...GAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp CACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCCACAAAGGAGCATCCTaGGGTCTCGCCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: HSSGSQGCQRSRTTGEQLHKGAS*GLAPLL
Trigger: GAGAAGTGGGGCGAGACCTCAGGATGCTCCTTTGTG...GAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp ACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTGGCAGGGGAATCGCTTaGGCCTGGGAGATCGAGGTT +
Preference number: 4 (lower is better)
Translates to: TAVGAKAVSDRGPQVNNSGRGIA*AWEIEV
Trigger: AACCTCGATCTCCCAGGCTCAAGCGATTCCCCTGCC...AGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp GGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACAGATGAGAACGGCGAACTGCCAGGATaGACCAGTGCACCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GPETSLPLTILPPDTDENGELPG*TSAPFC
Trigger: GCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCC...GTTCTCATCTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp CTCTGTTGCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCCGTGGGTGTGGGCACTaGCCAAATTCTTTACCCTGG +
Preference number: 4 (lower is better)
Translates to: LCCQDWNAEARSPLIAGSRGCGH*PNSLPW
Trigger: CCAGGGTAAAGAATTTGGGCAGTGCCCACACCCACG...GGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGCAACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp AGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCACTTGCCAACAGCGTGGGTGTaGGCACTGCCCAAATTCTTT +
Preference number: 4 (lower is better)
Translates to: RLECRGAISAHCRLRLHLPTAWV*ALPKFF
Trigger: AAAGAATTTGGGCAGTGCCCACACCCACGCTGTTGG...CAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp GACTCAGGGAACACACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACTGTTATCCAACAGCGTaGGTGTGGGCACTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: DSGNTQQWEPRLSAIEDHCYPTA*VWALPK
Trigger: TTTGGGCAGTGCCCACACCCACGCTGTTGGATAACA...GTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCCTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp GTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTGCGCCGTTATTCAAGAAGACCTaGGCTTCACACCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGAKAVSDRGPQVNNSAPLFKKT*ASHQGC
Trigger: ACAGCCCTGGTGTGAAGCGCAGGTCTTCTTGAATAA...CGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp AAGACGTCCTCAAGGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGAGCCAGGATGCACCAGTaGACCGTTCTGCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: KTSSRARDQPATHHFATRARMHQ*TVLLHV
Trigger: AACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGC...TCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGAGGACGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp ACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTACAGGTGAACAACTCTaGGCCGCCGTGGTATCACCT +
Preference number: 4 (lower is better)
Translates to: TAVGAKAVSDRGPQVNNSTGEQL*AAVVSP
Trigger: AGGTGATACCACGGCGGCGCAGAGTTGTTCACCTGT...AGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp GTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTGCGCCGCTCTTCTTCCTCCACTaGGTAGTAATCCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: VGAKAVSDRGPQVNNSAPLFFLH*VVIHKL
Trigger: CAGCTTGTGGATTACTACGCAGTGGAGGAAGAAGAG...CGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp CCACTTGACTCAGGGAACACACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGCTCCCCAAGTGCTGGTaGCATATACCTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PLDSGNTQQWEPRLSAIELPKCW*HIPSSP
Trigger: TGGGGAAGAAGGTATATGCCACCAGCACTTGGGGAG...CTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCCTGAGTCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp GCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCAATTCTCCCCAAGTGCTaGTGGCATATACCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AKTGMQRRDLRSLQAPPPILPKC*WHIPSS
Trigger: GGAAGAAGGTATATGCCACCAGCACTTGGGGAGAAT...TGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp AGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCACTTGTGTATCCTCACACAGTaGAGAGCAGAGACAGACAGC +
Preference number: 4 (lower is better)
Translates to: RLECRGAISAHCRLRLHLCILTQ*RAETDS
Trigger: GCTGTCTGTCTCTGCTCTCCACTGTGTGAGGATACA...CAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp AGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCACTTGGGTATCACCTCTAGGTaGATCTTCTGCCTGTCGGTT +
Preference number: 4 (lower is better)
Translates to: RLECRGAISAHCRLRLHLGITSR*IFCLSV
Trigger: AACCGACAGGCAGAAGATCCACCTAGAGGTGATACC...CAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp AGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCACTTGCCTTTGAGAGCTTCCTaGAATACTTTTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RLECRGAISAHCRLRLHLPLRAS*NTFPAL
Trigger: GAGGGCTGGAAAAGTATTTCAGGAAGCTCTCAAAGG...CAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp CCTCTCTTGAGTCCTTACCAGACTAAGACGTCCTCAAGGGCCAGAGACCAGCCTGCCCTAAGAATTCCCTaGGCCAGTGATCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PLLSPYQTKTSSRARDQPALRIP*ASDRSL
Trigger: GAGACTGCGATCACTGGCTCAGGGAATTCTTAGGGC...AGGCTGGTCTCTGGCCCTTGAGGACGTCTTAGTCTGGTAAGGACTCAAGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR TCA 90 bp ACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTTTACCCTGGAACAACTaGGGTCAGGCCTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TAVGAKAVSDRGPQVNNSLPWNN*GQAFLE
Trigger: TTCCAGGAAGGCCTGACCTCAGTTGTTCCAGGGTAA...AGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp TGCTACTCTTCTAACTCCCGGGGATCCATGCCCTCCCCTCTGTTTAATTCCCCCGCCAGGATGCACCAGTaGACCGTTCTGCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: CYSSNSRGSMPSPLFNSPARMHQ*TVLLHV
Trigger: AACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGC...GGGGGAATTAAACAGAGGGGAGGGCATGGATCCCCGGGAGTTAGAAGAGTAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp GGAAAGGGAGGATGGTGGGAAATCCTTATAGCCATCACTGACTCTCCAGACAGGGGCGAACTGCCAGGATaGACCAGTGCACCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GKGGWWEILIAITDSPDRGELPG*TSAPFC
Trigger: GCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCC...CCTGTCTGGAGAGTCAGTGATGGCTATAAGGATTTCCCACCATCCTCCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR GCA 90 bp GCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCAAGATGTGAGCTGCTGTaGCCAGCCCTATCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: AKTGMQRRDLRSLQAPPPRCELL*PALSFK
Trigger: TTTAAAAGATAGGGCTGGGCACAGCAGCTCACATCT...TGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp CCACTTGACTCAGGGAACACACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGATTTCTCTCCATTGGTaGCGAACTGCCAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: PLDSGNTQQWEPRLSAIEISLHW*RTARMH
Trigger: GTGCATCCTGGCAGTTCGCCACCAATGGAGAGAAAT...CTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCCTGAGTCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp CGCACACACACACTGACACCCACACAGGGAAGGCTTTTGACCTTTAAAGGGAGCGTTACCTGTCGGTTCTaGCATTGCCTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RTHTLTPTQGRLLTFKGSVTCRF*HCLPVP
Trigger: GGGCACTGGGAGGCAATGCCAGAACCGACAGGTAAC...GCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp CACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCCGTTCTGCTTCACGTTaGCAAAACATCTCGACTTGC +
Preference number: 4 (lower is better)
Translates to: HSSGSQGCQRSRTTGEQLRSASR*QNISTC
Trigger: GCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACG...GAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp GACTCAGGGAACACACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACGTCTGTGAGAAATGGTaGATGCAGAAAACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DSGNTQQWEPRLSAIEDHVCEKW*MQKTAS
Trigger: TGAGGCAGTTTTCTGCATTCACCATTTCTCACAGAC...GTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp ACAATCTCACGAGCAAAGGCTCACTGCAGCTTCAGATTCCTGGGCTCAAGTGATCTGGGAGATCGAGGTTaGAGTGAGCCGGGATCGCAC +
Preference number: 4 (lower is better)
Translates to: TISRAKAHCSFRFLGSSDLGDRG*SEPGSH
Trigger: GTGCGATCCCGGCTCACTGCAACCTCGATCTCCCAG...ATCACTTGAGCCCAGGAATCTGAAGCTGCAGTGAGCCTTTGCTCGTGAGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp CCACTTGACTCAGGGAACACACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGCCCTCACTGGTATGGTaGAGAAATGTTATCCAACAG +
Preference number: 4 (lower is better)
Translates to: PLDSGNTQQWEPRLSAIEPSLVW*RNVIQQ
Trigger: CTGTTGGATAACATTTCTTCACCATACCAGTGAGGG...CTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCCTGAGTCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp GGAAAGGGAGGATGGTGGGAAATCCTTATAGCCATCACTGACTCTCCAGACAGGGCCAGGATGCACCAGTaGACCGTTCTGCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: GKGGWWEILIAITDSPDRARMHQ*TVLLHV
Trigger: AACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGC...CCTGTCTGGAGAGTCAGTGATGGCTATAAGGATTTCCCACCATCCTCCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp TGGGCTGGTGGTAGGATCATAGGTCCACAATCTCACGAGCAAAGGCTCACTGCAGGGATTTCTCTCCATTaGTGGCGAACTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: WAGGRIIGPQSHEQRLTAGISLH*WRTARM
Trigger: CATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCC...TGCAGTGAGCCTTTGCTCGTGAGATTGTGGACCTATGATCCTACCACCAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp GGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACAGATGAGAACAGTGACCACCAACCATaGTCTCCAAGGCTATTAGTA +
Preference number: 4 (lower is better)
Translates to: GPETSLPLTILPPDTDENSDHQP*SPRLLV
Trigger: TACTAATAGCCTTGGAGATCATGGTTGGTGGTCACT...GTTCTCATCTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR TCA 90 bp AGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCACTTGATCTTACTGGCTTCATaGTTAATTACTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RLECRGAISAHCRLRLHLILLAS*LITVQV
Trigger: GACCTGGACAGTAATTAATCATGAAGCCAGTAAGAT...CAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp CACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTCTTCCATGTCTCCTTaGTCTTACTGGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: HSSGSQGCQRSRTTGEQLSSMSP*SYWLHD
Trigger: ATCATGAAGCCAGTAAGATCAAGGAGACATGGAAGA...GAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp ACGTCCTCAAGGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACGCCACCAGACACAGATaGGAACAATTCCCATTAAAA +
Preference number: 4 (lower is better)
Translates to: TSSRARDQPATHHFATRHATRHR*EQFPLK
Trigger: TTTTAATGGGAATTGTTCTCATCTGTGTCTGGTGGC...GTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGAGGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp ATGAATGCCCCCAGGATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGTGGGGCCAGAGACCAGCCTaGCACTCACCATTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: MNAPRMIHLSGRLEEDQWGQRPA*HSPFCH
Trigger: GTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCC...CCACTGGTCTTCTTCTAGTCTACCAGATAGATGGATCATCCTGGGGGCATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp TGCTACTCTTCTAACTCCCGGGGATCCATGCCCTCCCCTCTGTTTAATTCCCCCTTTGAGACGGAGTCTTaGTCTGTTGCCAAGACTGGA +
Preference number: 4 (lower is better)
Translates to: CYSSNSRGSMPSPLFNSPFETES*SVAKTG
Trigger: TCCAGTCTTGGCAACAGAGCAAGACTCCGTCTCAAA...GGGGGAATTAAACAGAGGGGAGGGCATGGATCCCCGGGAGTTAGAAGAGTAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp TGGGCTGGTGGTAGGATCATAGGTCCACAATCTCACGAGCAAAGGCTCACTGCAACTTCTCCCAGCGTTTaGGTCAATTCTCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: WAGGRIIGPQSHEQRLTATSPSV*VNSPQV
Trigger: CACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGT...TGCAGTGAGCCTTTGCTCGTGAGATTGTGGACCTATGATCCTACCACCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp TCACCTCTCTTGAGTCCTTACCAGACTAAGACGTCCTCAAGGGCCAGAGACCAGTCTCGACTTGCAGAGTaGAAGGATCTTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPLLSPYQTKTSSRARDQSRLAE*KDLLPQ
Trigger: CTGGGGAAGAAGATCCTTCCACTCTGCAAGTCGAGA...CTGGTCTCTGGCCCTTGAGGACGTCTTAGTCTGGTAAGGACTCAAGAGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR TCA 90 bp TGCTACTCTTCTAACTCCCGGGGATCCATGCCCTCCCCTCTGTTTAATTCCCCCAGTGACCACCAACCATaGTCTCCAAGGCTATTAGTA +
Preference number: 4 (lower is better)
Translates to: CYSSNSRGSMPSPLFNSPSDHQP*SPRLLV
Trigger: TACTAATAGCCTTGGAGATCATGGTTGGTGGTCACT...GGGGGAATTAAACAGAGGGGAGGGCATGGATCCCCGGGAGTTAGAAGAGTAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp ACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACCACAAAGGAGCATCCTaGGGTCTCGCCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: TGSPRRSQSNFLSHTHTDHKGAS*GLAPLL
Trigger: GAGAAGTGGGGCGAGACCTCAGGATGCTCCTTTGTG...GTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp AGTGGATATCTGAAGCATTTACTGGTGACACTGTCGGTTCTGGCATTGCCTCCCAATTCCCTGAGCCAGTaGTCGCAGTCTCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SGYLKHLLVTLSVLALPPNSLSQ*SQSPFE
Trigger: CTCAAAGGGAGACTGCGATCACTGGCTCAGGGAATT...GGGAGGCAATGCCAGAACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp ACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACCCATTGGTGGCGAACTaGCAGGATGCACCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TGSPRRSQSNFLSHTHTDPLVAN*QDAPVH
Trigger: GTGCACTGGTGCATCCTGGCAGTTCGCCACCAATGG...GTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp ACTGACTCTCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCAGCCCTAAGAATTCCCTaGGCCAGTGATCGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TDSPDRKPTEKSIKFSIAALRIP*ASDRSL
Trigger: GAGACTGCGATCACTGGCTCAGGGAATTCTTAGGGC...TGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGAGAGTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR GCA 90 bp GGAAAGGGAGGATGGTGGGAAATCCTTATAGCCATCACTGACTCTCCAGACAGGTTATTCAAGAAGACCTaGGCTTCACACCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GKGGWWEILIAITDSPDRLFKKT*ASHQGC
Trigger: ACAGCCCTGGTGTGAAGCGCAGGTCTTCTTGAATAA...CCTGTCTGGAGAGTCAGTGATGGCTATAAGGATTTCCCACCATCCTCCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR GCA 90 bp CTAGAAGAAGACCAGTGGATATCTGAAGCATTTACTGGTGACACTGTCGGTTCTCCATTGGTGGCGAACTaGCAGGATGCACCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LEEDQWISEAFTGDTVGSPLVAN*QDAPVH
Trigger: GTGCACTGGTGCATCCTGGCAGTTCGCCACCAATGG...AGAACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACTGGTCTTCTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp AGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACCTTTAAAGGGAGCTaGCACATTCTCCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: SPRRSQSNFLSHTHTDTHTFKGS*HILPPS
Trigger: GCTGGGTGGGAGAATGTGGCAGCTCCCTTTAAAGGT...GTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp ACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTCACATTCACCCTCACTaGTATGGTGAAGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: TAVGAKAVSDRGPQVNNSHIHPH*YGEEML
Trigger: TAACATTTCTTCACCATACCAGTGAGGGTGAATGTG...AGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp AGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACCTCCCCAAGTGCTGGTaGCATATACCTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPRRSQSNFLSHTHTDTHLPKCW*HIPSSP
Trigger: TGGGGAAGAAGGTATATGCCACCAGCACTTGGGGAG...GTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp TGGGCTGGTGGTAGGATCATAGGTCCACAATCTCACGAGCAAAGGCTCACTGCATCTCGACTTGCAGAGTaGAAGGATCACTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: WAGGRIIGPQSHEQRLTASRLAE*KDHWSL
Trigger: TAAAGACCAGTGATCCTTCCACTCTGCAAGTCGAGA...TGCAGTGAGCCTTTGCTCGTGAGATTGTGGACCTATGATCCTACCACCAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp ATGGGAAAGGGAGGATGGTGGGAAATCCTTATAGCCATCACTGACTCTCCAGACATTTCTCTCCATTGGTaGCGAACTGCCAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: MGKGGWWEILIAITDSPDISLHW*RTARMH
Trigger: GTGCATCCTGGCAGTTCGCCACCAATGGAGAGAAAT...GTCTGGAGAGTCAGTGATGGCTATAAGGATTTCCCACCATCCTCCCTTTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp CCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAAATTCCCTGAGCCAGTaGTCGCAGTCTCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PRRSQSNFLSHTHTDTHTNSLSQ*SQSPFE
Trigger: CTCAAAGGGAGACTGCGATCACTGGCTCAGGGAATT...TGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp TCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACACAGGGAAGGCTTTTaGCCTTTAAAGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRQEAHGEVNQIFYRTHTHREGF*PLKGAA
Trigger: GGCAGCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTG...TGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR GCA 90 bp AGTGGATATCTGAAGCATTTACTGGTGACACTGTCGGTTCTGGCATTGCCTCCCTTATTCAAGAAGACCTaGGCTTCACACCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGYLKHLLVTLSVLALPPLFKKT*ASHQGC
Trigger: ACAGCCCTGGTGTGAAGCGCAGGTCTTCTTGAATAA...GGGAGGCAATGCCAGAACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp AGTGGATATCTGAAGCATTTACTGGTGACACTGTCGGTTCTGGCATTGCCTCCCTGCCACTCACCATTTTaGCACCAGACACAGATGAGA +
Preference number: 4 (lower is better)
Translates to: SGYLKHLLVTLSVLALPPCHSPF*HQTQMR
Trigger: TCTCATCTGTGTCTGGTGGCAAAATGGTGAGTGGCA...GGGAGGCAATGCCAGAACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CCA 90 bp AGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACTTCTCCCAGCGTTTaGGTCAATTCTCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SPRRSQSNFLSHTHTDTHTSPSV*VNSPQV
Trigger: CACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGT...GTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp ATGAATGCCCCCAGGATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGTGGATTTCTCTCCATTGGTaGCGAACTGCCAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: MNAPRMIHLSGRLEEDQWISLHW*RTARMH
Trigger: GTGCATCCTGGCAGTTCGCCACCAATGGAGAGAAAT...CCACTGGTCTTCTTCTAGTCTACCAGATAGATGGATCATCCTGGGGGCATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CCA 90 bp CAGTCTCCCTTTGAGAGCTTCCTGAAATACTTTTCCAGCCCTCTGTCTTTCTTCGGGATTTCTCTCCATTaGTGGCGAACTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: QSPFESFLKYFSSPLSFFGISLH*WRTARM
Trigger: CATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCC...GAAGAAAGACAGAGGGCTGGAAAAGTATTTCAGGAAGCTCTCAAAGGGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CCA 90 bp CCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGGGATTTCTCTCCATTaGTGGCGAACTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PRRSQSNFLSHTHTDTHTGISLH*WRTARM
Trigger: CATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCC...TGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp TCCTCAAGGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACAGACTAGAAGAAGACCAGTaGATATCTGAAGCATTTACT +
Preference number: 4 (lower is better)
Translates to: SSRARDQPATHHFATRHRLEEDQ*ISEAFT
Trigger: AGTAAATGCTTCAGATATCCACTGGTCTTCTTCTAG...TCTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CCA 90 bp ACAATCTCACGAGCAAAGGCTCACTGCAGCTTCAGATTCCTGGGCTCAAGTGATCTCTTCCTCACCAGATaGCTGTCTTCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: TISRAKAHCSFRFLGSSDLFLTR*LSSCCI
Trigger: GATACAACAGGAAGACAGCCATCTGGTGAGGAAGAG...ATCACTTGAGCCCAGGAATCTGAAGCTGCAGTGAGCCTTTGCTCGTGAGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp CAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACAAAGGGGTTTCTACACTaGGGAAGAAACAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QEAHGEVNQIFYRTHTLTKGFLH*GRNSGR
Trigger: CCTCCCACTGTTTCTTCCTCAGTGTAGAAACCCCTT...TGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp GAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCATTCTCCCCAAGTGCTaGTGGCATATACCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EAHGEVNQIFYRTHTLTPILPKC*WHIPSS
Trigger: GGAAGAAGGTATATGCCACCAGCACTTGGGGAGAAT...GGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp GAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCGGAAAGGGAGGATGGTaGGAAATCCTTATAGCCATC +
Preference number: 4 (lower is better)
Translates to: EAHGEVNQIFYRTHTLTPGKGGW*EILIAI
Trigger: GATGGCTATAAGGATTTCCCACCATCCTCCCTTTCC...GGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp TCACCTCTCTTGAGTCCTTACCAGACTAAGACGTCCTCAAGGGCCAGAGACCAGTCCAGGTCTGGACAATaGTTTTATAGTGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SPLLSPYQTKTSSRARDQSRSGQ*FYSEVE
Trigger: TTCAACTTCACTATAAAATCATTGTCCAGACCTGGA...CTGGTCTCTGGCCCTTGAGGACGTCTTAGTCTGGTAAGGACTCAAGAGAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR TCA 90 bp ACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACCGTTCTGCTTCACGTTaGCAAAACATCTCGACTTGC +
Preference number: 4 (lower is better)
Translates to: TGSPRRSQSNFLSHTHTDRSASR*QNISTC
Trigger: GCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACG...GTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp GAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACAGATGAGAACAATTCCATCTTACTGGCTTCATaGTTAATTACTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ETSLPLTILPPDTDENNSILLAS*LITVQV
Trigger: GACCTGGACAGTAATTAATCATGAAGCCAGTAAGAT...GGAATTGTTCTCATCTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp AGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACCAAAACATCTCGACTTaGAGAGTGGAAGGATCACTG +
Preference number: 4 (lower is better)
Translates to: SPRRSQSNFLSHTHTDTHQNIST*RVEGSL
Trigger: CAGTGATCCTTCCACTCTGCAAGTCGAGATGTTTTG...GTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CCA 90 bp AGGATGAATGCCCCCAGGATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGATTCTTCGCATACTGTaGAGAGTAACAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RMNAPRMIHLSGRLEEDQILRIL*RVTGRK
Trigger: CTTCCTGCCTGTTACTCTCCACAGTATGCGAAGAAT...CTGGTCTTCTTCTAGTCTACCAGATAGATGGATCATCCTGGGGGCATTCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CCA 90 bp ACAATCTCACGAGCAAAGGCTCACTGCAGCTTCAGATTCCTGGGCTCAAGTGATTCACTGGTCTTTATCTaGGGTTTGATGTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: TISRAKAHCSFRFLGSSDSLVFI*GLMSQR
Trigger: CCTTTGTGACATCAAACCCCAGATAAAGACCAGTGA...ATCACTTGAGCCCAGGAATCTGAAGCTGCAGTGAGCCTTTGCTCGTGAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR TCA 90 bp ACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACAGTGACCACCAACCATaGTCTCCAAGGCTATTAGTA +
Preference number: 4 (lower is better)
Translates to: TGSPRRSQSNFLSHTHTDSDHQP*SPRLLV
Trigger: TACTAATAGCCTTGGAGATCATGGTTGGTGGTCACT...GTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp AGGATGAATGCCCCCAGGATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGTCTTCCATGTCTCCTTaGTCTTACTGGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: RMNAPRMIHLSGRLEEDQSSMSP*SYWLHD
Trigger: ATCATGAAGCCAGTAAGATCAAGGAGACATGGAAGA...CTGGTCTTCTTCTAGTCTACCAGATAGATGGATCATCCTGGGGGCATTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR TCA 90 bp CTAGAAGAAGACCAGTGGATATCTGAAGCATTTACTGGTGACACTGTCGGTTCTCCTTTGAGAGCTTCCTaGAATACTTTTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LEEDQWISEAFTGDTVGSPLRAS*NTFPAL
Trigger: GAGGGCTGGAAAAGTATTTCAGGAAGCTCTCAAAGG...AGAACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACTGGTCTTCTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR TCA 90 bp AGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGGGAAGCCTTTGAGAGCTTCCTaGAATACTTTTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSQSNFLSHTHTDTHTGKPLRAS*NTFPAL
Trigger: GAGGGCTGGAAAAGTATTTCAGGAAGCTCTCAAAGG...CTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp CACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGAGCAGTGGGTCATTGTaGCTGGATCATTGGTTAATG +
Preference number: 4 (lower is better)
Translates to: HGEVNQIFYRTHTLTPTQSSGSL*LDHWLM
Trigger: CATTAACCAATGATCCAGTCACAATGACCCACTGCT...CTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp CTGTGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACGGCTCCGCCTCCACTTaGCTCAGGGAACACACAGCA +
Preference number: 4 (lower is better)
Translates to: LCSHNLYSQFCYIRLFENGSAST*LREHTA
Trigger: TGCTGTGTGTTCCCTGAGTCAAGTGGAGGCGGAGCC...GTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp ACTGACTCTCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCATCAATTCTCCCCAAGTaGTGGTGGCATATACCTTCT +
Preference number: 4 (lower is better)
Translates to: TDSPDRKPTEKSIKFSIASILPK*WWHIPS
Trigger: AGAAGGTATATGCCACCAGCACTTGGGGAGAATTGA...TGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGAGAGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR GCA 90 bp CAGTCTCCCTTTGAGAGCTTCCTGAAATACTTTTCCAGCCCTCTGTCTTTCTTCACCAGTGCACCGTTCTaGTTCACGTTGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: QSPFESFLKYFSSPLSFFTSAPF*FTLTKH
Trigger: ATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGT...GAAGAAAGACAGAGGGCTGGAAAAGTATTTCAGGAAGCTCTCAAAGGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp TGGGCTGGTGGTAGGATCATAGGTCCACAATCTCACGAGCAAAGGCTCACTGCAGTGAATGCAGAAAACTaGCTCACAAATGATTATACT +
Preference number: 4 (lower is better)
Translates to: WAGGRIIGPQSHEQRLTAVNAEN*LTNDYT
Trigger: AGTATAATCATTTGTGAGGCAGTTTTCTGCATTCAC...TGCAGTGAGCCTTTGCTCGTGAGATTGTGGACCTATGATCCTACCACCAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp ACAATCTCACGAGCAAAGGCTCACTGCAGCTTCAGATTCCTGGGCTCAAGTGATGTGAGAAATGGTGAATaGAGAAAACTGCCTCACAAA +
Preference number: 4 (lower is better)
Translates to: TISRAKAHCSFRFLGSSDVRNGE*RKLPHK
Trigger: TTTGTGAGGCAGTTTTCTGCATTCACCATTTCTCAC...ATCACTTGAGCCCAGGAATCTGAAGCTGCAGTGAGCCTTTGCTCGTGAGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp TCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACATCTCGACTTGCAGAGTaGAAGGATCACTGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: SRQEAHGEVNQIFYRTHTSRLAE*KDHWSL
Trigger: TAAAGACCAGTGATCCTTCCACTCTGCAAGTCGAGA...TGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp TCTGGTAGACTAGAAGAAGACCAGTGGATATCTGAAGCATTTACTGGTGACACTCGTTCTGCTTCACGTTaGCAAAACATCTCGACTTGC +
Preference number: 4 (lower is better)
Translates to: SGRLEEDQWISEAFTGDTRSASR*QNISTC
Trigger: GCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACG...AGTGTCACCAGTAAATGCTTCAGATATCCACTGGTCTTCTTCTAGTCTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR GCA 90 bp AGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGGGAAGACCAGTGCACCGTTCTaGTTCACGTTGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: RSQSNFLSHTHTDTHTGKTSAPF*FTLTKH
Trigger: ATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGT...CTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp TCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACAATCTTACTGGCTTCATaGTTAATTACTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SRQEAHGEVNQIFYRTHTILLAS*LITVQV
Trigger: GACCTGGACAGTAATTAATCATGAAGCCAGTAAGAT...TGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp AGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGGGAAGTCTTCCATGTCTCCTTaGTCTTACTGGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: RSQSNFLSHTHTDTHTGKSSMSP*SYWLHD
Trigger: ATCATGAAGCCAGTAAGATCAAGGAGACATGGAAGA...CTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR GCA 90 bp ACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACTTTATTCCAATGCAACTCCCGGGGATCCATaGCCTCCCCTCTGTTTAATT +
Preference number: 4 (lower is better)
Translates to: TVSSAISGCLKTVLYSNATPGDP*PPLCLI
Trigger: AATTAAACAGAGGGGAGGGCATGGATCCCCGGGAGT...TGCATTGGAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp AGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGGGAAGTCACTGGTCTTTATCTaGGGTTTGATGTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: RSQSNFLSHTHTDTHTGKSLVFI*GLMSQR
Trigger: CCTTTGTGACATCAAACCCCAGATAAAGACCAGTGA...CTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR TCA 90 bp CTGTGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACAATTCCCTGAGCCAGTaGTCGCAGTCTCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LCSHNLYSQFCYIRLFENNSLSQ*SQSPFE
Trigger: CTCAAAGGGAGACTGCGATCACTGGCTCAGGGAATT...GTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp CTGTGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACGAGGTCAGGCCTTCCTaGAAGATGGGAAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LCSHNLYSQFCYIRLFENEVRPS*KMGSPR
Trigger: TCTTGGACTTCCCATCTTCCAGGAAGGCCTGACCTC...GTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp TGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTGCAGCTTCAGATTCCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CSHNLYSQFCYIRLFENRAASDS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGGAATCTGAAGCTGC...ACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp TGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTGGCCTTCCTGGAAGATaGGAAGTCCAAGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: CSHNLYSQFCYIRLFENRGLPGR*EVQDQG
Trigger: ACCTTGATCTTGGACTTCCCATCTTCCAGGAAGGCC...ACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp ACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACTTTATTCCAATGCACAAAACATCTCGACTTaGAGAGTGGAAGGATCACTG +
Preference number: 4 (lower is better)
Translates to: TVSSAISGCLKTVLYSNAQNIST*RVEGSL
Trigger: CAGTGATCCTTCCACTCTGCAAGTCGAGATGTTTTG...TGCATTGGAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp ACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACTTTATTCCAATGCAATTCTTCGCATACTGTaGAGAGTAACAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVSSAISGCLKTVLYSNAILRIL*RVTGRK
Trigger: CTTCCTGCCTGTTACTCTCCACAGTATGCGAAGAAT...TGCATTGGAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CCA 90 bp TGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTAGAACTACTTGTGTCTaGGCTCAGTGGCTCATGCTA +
Preference number: 4 (lower is better)
Translates to: CSHNLYSQFCYIRLFENRRTTCV*AQWLML
Trigger: TAGCATGAGCCACTGAGCCCAGACACAAGTAGTTCT...ACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR GCA 90 bp TGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACCAGTGCACCGTTCTaGTTCACGTTGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: CSHNLYSQFCYIRLFENRTSAPF*FTLTKH
Trigger: ATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGT...ACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS GCA 90 bp GGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTaGGCCGCCGTGGTATCACCTCTAGGTGGATCTTCTGCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: GSQGCQRSRTTGEQL*AAVVSPLGGSSACR
Trigger: CCGACAGGCAGAAGATCCACCTAGAGGTGATACCACGGCGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp GACTCAGGGAACACACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGCTCCGCCTCCACTaGACTCAGGGAACACACAGC +
Preference number: 5 (lower is better)
Translates to: DSGNTQQWEPRLSAIEDHRLRLH*TQGTHS
Trigger: GCTGTGTGTTCCCTGAGTCAAGTGGAGGCGGAGCCT...GTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGTGTTCCCTGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS TCA 90 bp ACACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTaGACAACTCTGCGCCGCCGTGGTATCACCTCTAGGTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: TQQWEPRLSAIEDHR*TTLRRRGITSRWIF
Trigger: GAAGATCCACCTAGAGGTGATACCACGGCGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp AGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCACTTGAGGAGGCCCAGAGGTTaGACCATGTTGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: RLECRGAISAHCRLRLHLRRPRG*TMLLSL
Trigger: CAGTGACAACAACATGGTCAAACCTCTGGGCCTCCT...CAAGTGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp CCTCAAGGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACAGATCTGTCGGTTCTGGCATaGCCTCCCAGTGCCCTAAGA +
Preference number: 5 (lower is better)
Translates to: PQGPETSLPLTILPPDTDLSVLA*PPSALR
Trigger: TCTTAGGGCACTGGGAGGCAATGCCAGAACCGACAG...ATCTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS CCA 90 bp GGAAGATGGGAAGTCCAAGATCAAGGTGTCAGCAGGTCCGGTATCTaGCGAGGGCCCTCTCTTCCTCACCAGATGGCTGTCTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: GRWEVQDQGVSRSGI*RGPSLPHQMAVFLL
Trigger: CAACAGGAAGACAGCCATCTGGTGAGGAAGAGAGGGCCCTCGCCAGATACCGGACCTGCTGACACCTTGATCTTGGACTTCCCATCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524905.1
ENST00000531073.1
ENST00000532335.5
CDS CCA 90 bp TCACAAAGGAGCATCCTGAGGTCTCGCCCCACTTCTCCCAGCGTTTaGGTCAATTCTCCCCAAGTGCTGGTGGCATATACCTTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SQRSILRSRPTSPSV*VNSPQVLVAYTFFP
Trigger: GGGGAAGAAGGTATATGCCACCAGCACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGTGGGGCGAGACCTCAGGATGCTCCTTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS-3UTR CAA 90 bp GCCAAGACTGGAATGCAGAGGCGCGATCTCCGCTCATTGCAGGCTCCGCCTCCAACAAAACATCTCGACTaGCAGAGTGGAAGGATCACT +
Preference number: 5 (lower is better)
Translates to: AKTGMQRRDLRSLQAPPPTKHLD*QSGRIT
Trigger: AGTGATCCTTCCACTCTGCAAGTCGAGATGTTTTGT...TGGAGGCGGAGCCTGCAATGAGCGGAGATCGCGCCTCTGCATTCCAGTCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp TCCTCAAGGGCCAGAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACAGAAGGGATTTCTCTCCATaGGTGGCGAACTGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SSRARDQPATHHFATRHRRDFSP*VANCQD
Trigger: ATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCCT...TCTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CAA 90 bp ACAGCAGTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTAGGGATTTCTCTCCATaGGTGGCGAACTGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: TAVGAKAVSDRGPQVNNSRDFSP*VANCQD
Trigger: ATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCCT...AGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCACTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp CGCACACACACACTGACACCCACACAGGGAAGGCTTTTGACCTTTAAAGGGAGCCTGTCGGTTCTGGCATaGCCTCCCAGTGCCCTAAGA +
Preference number: 5 (lower is better)
Translates to: RTHTLTPTQGRLLTFKGSLSVLA*PPSALR
Trigger: TCTTAGGGCACTGGGAGGCAATGCCAGAACCGACAG...GCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS TCA 90 bp CAGCGTGGGTGTGGGCACTGCCCAAATTCTTTACCCTGGAACAACTaGGGTCAGGCCTTCCTGGAAGATGGGAAGTCCAAGATCAAGGTG +
Preference number: 5 (lower is better)
Translates to: QRGCGHCPNSLPWNN*GQAFLEDGKSKIKV
Trigger: CACCTTGATCTTGGACTTCCCATCTTCCAGGAAGGCCTGACCTCAGTTGTTCCAGGGTAAAGAATTTGGGCAGTGCCCACACCCACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531073.1
ENST00000532335.5
CDS TCA 90 bp CAGGCAGGAAGCTGGGCGTGTACACATTCACCCTCACTGGTATGGTaGAGAAATGTTATCCAACAGCGTGGGTGTGGGCACTGCCCAAAT +
Preference number: 5 (lower is better)
Translates to: QAGSWACTHSPSLVW*RNVIQQRGCGHCPN
Trigger: ATTTGGGCAGTGCCCACACCCACGCTGTTGGATAACATTTCTTCACCATACCAGTGAGGGTGAATGTGTACACGCCCAGCTTCCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS TCA 90 bp GTGGCGAACTGCCAGGATGCACCAGTGCACCGTTCTGCTTCACGTTaGCAAAACATCTCGACTTGCAGAGTGGAAGGATCTTCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: VANCQDAPVHRSASR*QNISTCRVEGSSSP
Trigger: TGGGGAAGAAGATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS GCA 90 bp CTCTCCATTGGTGGCGAACTGCCAGGATGCACCAGTGCACCGTTCTaGTTCACGTTGACAAAACATCTCGACTTGCAGAGTGGAAGGATC +
Preference number: 5 (lower is better)
Translates to: LSIGGELPGCTSAPF*FTLTKHLDLQSGRI
Trigger: GATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCACCAATGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000392270.3
ENST00000529948.1
ENST00000532335.5
CDS GCA 90 bp GGAGGGATTTCTCTCCATTGGTGGCGAACTGCCAGGATGCACCAGTaGACCGTTCTGCTTCACGTTGACAAAACATCTCGACTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GGISLHWWRTARMHQ*TVLLHVDKTSRLAE
Trigger: CTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000392270.3
ENST00000529948.1
ENST00000532335.5
CDS GCA 90 bp ACACTGACACCCACACAGGGAAGGCTTTTGACCTTTAAAGGGAGCTaGCACATTCTCCCACCCAGCTCAGTTACCTGTCGGTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TLTPTQGRLLTFKGS*HILPPSSVTCRFWH
Trigger: ATGCCAGAACCGACAGGTAACTGAGCTGGGTGGGAGAATGTGGCAGCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTGTGGGTGTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS CCA 90 bp AGAAGGCGCACAGGGCTAGAAGTCAGGGATATTCTTCGCATACTGTaGAGAGTAACAGGCAGGAAGCTGGGCGTGTACACATTCACCCTC +
Preference number: 5 (lower is better)
Translates to: RRRTGLEVRDILRIL*RVTGRKLGVYTFTL
Trigger: GAGGGTGAATGTGTACACGCCCAGCTTCCTGCCTGTTACTCTCCACAGTATGCGAAGAATATCCCTGACTTCTAGCCCTGTGCGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS-3UTR CAA 90 bp CGCACACACACACTGACACCCACACAGGGAAGGCTTTTGACCTTTAAAGGGAGCCACTTCTCCCAGCGTTaGGGTCAATTCTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: RTHTLTPTQGRLLTFKGSHFSQR*GQFSPS
Trigger: ACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGTG...GCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS TCA 90 bp GTGGCGAACTGCCAGGATGCACCAGTGCACCGTTCTGCTTCACGTTaGCAAAACATCTCGACTTGCAGAGTGGAAGGATCACTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: VANCQDAPVHRSASR*QNISTCRVEGSLVF
Trigger: AAAGACCAGTGATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS CCA 90 bp GAGAGTAACAGGCAGGAAGCTGGGCGTGTACACATTCACCCTCACTaGTATGGTGAAGAAATGTTATCCAACAGCGTGGGTGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: ESNRQEAGRVHIHPH*YGEEMLSNSVGVGT
Trigger: AGTGCCCACACCCACGCTGTTGGATAACATTTCTTCACCATACCAGTGAGGGTGAATGTGTACACGCCCAGCTTCCTGCCTGTTACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS-3UTR CAA 90 bp GAGACCAGCCTGCCACTCACCATTTTGCCACCAGACACAGATGAGAACAATTCCAGGAGGCCCAGAGGTTaGACCATGTTGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: ETSLPLTILPPDTDENNSRRPRG*TMLLSL
Trigger: CAGTGACAACAACATGGTCAAACCTCTGGGCCTCCT...GGAATTGTTCTCATCTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CAA 90 bp GTGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTGCGCCGGCTATATCAGGTTGTTaGAAAACCGTACTTTATTCC +
Preference number: 5 (lower is better)
Translates to: VGAKAVSDRGPQVNNSAPAISGC*KTVLYS
Trigger: GGAATAAAGTACGGTTTTCAAACAACCTGATATAGC...CGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp AGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACAGGAGGCCCAGAGGTTaGACCATGTTGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: SPRRSQSNFLSHTHTDTHRRPRG*TMLLSL
Trigger: CAGTGACAACAACATGGTCAAACCTCTGGGCCTCCT...GTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CAA 90 bp GAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCAGGGATTTCTCTCCATaGGTGGCGAACTGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: EAHGEVNQIFYRTHTLTPRDFSP*VANCQD
Trigger: ATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCCT...GGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CAA 90 bp AGGATGAATGCCCCCAGGATGATCCATCTATCTGGTAGACTAGAAGAAGACCAGCTGCCACTCACCATTTaGCCACCAGACACAGATGAG +
Preference number: 5 (lower is better)
Translates to: RMNAPRMIHLSGRLEEDQLPLTI*PPDTDE
Trigger: CTCATCTGTGTCTGGTGGCAAAATGGTGAGTGGCAG...CTGGTCTTCTTCTAGTCTACCAGATAGATGGATCATCCTGGGGGCATTCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS TCA 90 bp CTCCTATCACTTCTTAATCCCACATGGCTCCACTCACATGAGTTATaGCTTCCTTGTGCCAGCAGGAGATGTTTGTCCTTCTGCCGTCTC +
Preference number: 5 (lower is better)
Translates to: LLSLLNPTWLHSHEL*LPCASRRCLSFCRL
Trigger: GAGACGGCAGAAGGACAAACATCTCCTGCTGGCACAAGGAAGTCATAACTCATGTGAGTGGAGCCATGTGGGATTAAGAAGTGATAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524905.1
ENST00000531073.1
CDS CCA 90 bp CTCTTCCTCACCAGATGGCTGTCTTCCTGTTGTATCCTCACACAGTaGAGAGCAGAGACAGACAGCAAGCTCTCCTATCACTTCTTAATC +
Preference number: 5 (lower is better)
Translates to: LFLTRWLSSCCILTQ*RAETDSKLSYHFLI
Trigger: GATTAAGAAGTGATAGGAGAGCTTGCTGTCTGTCTCTGCTCTCCACTGTGTGAGGATACAACAGGAAGACAGCCATCTGGTGAGGAAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524905.1
ENST00000531073.1
ENST00000532335.5
CDS CCA 90 bp AGGTGGCTGAAACACCAAGCATTTATTTCTTACCTTCCTGGAAGATaGGAAGTCCAAGATCAAGGTGTCAGCAGGTCCGGTATCTGGCGA +
Preference number: 5 (lower is better)
Translates to: RWLKHQAFISYLPGR*EVQDQGVSRSGIWR
Trigger: TCGCCAGATACCGGACCTGCTGACACCTTGATCTTGGACTTCCCATCTTCCAGGAAGGTAAGAAATAAATGCTTGGTGTTTCAGCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS TCA 90 bp CAAGAAGACCTGCGCTTCACACCAGGGCTGTCCAGGTCTGGACAATaGTTTTATAGTGAAGTTGAAGCAAAGAGAGTGACCACCAACCAT +
Preference number: 5 (lower is better)
Translates to: QEDLRFTPGLSRSGQ*FYSEVEAKRVTTNH
Trigger: ATGGTTGGTGGTCACTCTCTTTGCTTCAACTTCACTATAAAATCATTGTCCAGACCTGGACAGCCCTGGTGTGAAGCGCAGGTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000392270.3
ENST00000529948.1
ENST00000531073.1
ENST00000532335.5
CDS CCA 90 bp GAGGTCCTTCCAGATGAGTTTTGTAATAGACTCCAGCAGTCCTACTaGGGCCAAGACCTCAAGGAAAGCCAAGTCTATCATTGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: EVLPDEFCNRLQQSY*GQDLKESQVYHWEK
Trigger: CTTTTCCCAATGATAGACTTGGCTTTCCTTGAGGTCTTGGCCCCAGTAGGACTGCTGGAGTCTATTACAAAACTCATCTGGAAGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS-3UTR CAA 90 bp AGTGGATATCTGAAGCATTTACTGGTGACACTGTCGGTTCTGGCATTGCCTCCCACAAAACATCTCGACTaGCAGAGTGGAAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: SGYLKHLLVTLSVLALPPTKHLD*QSGRIF
Trigger: GAAGATCCTTCCACTCTGCAAGTCGAGATGTTTTGT...GGGAGGCAATGCCAGAACCGACAGTGTCACCAGTAAATGCTTCAGATATCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CAA 90 bp ACTGACTCTCCAGACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACCGTTCTGCTTCACGTaGACAAAACATCTCGACTTG +
Preference number: 5 (lower is better)
Translates to: TDSPDRKPTEKSIKFSIAPFCFT*TKHLDL
Trigger: CAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGG...TGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGTCTGGAGAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CAA 90 bp CAGTCTCCCTTTGAGAGCTTCCTGAAATACTTTTCCAGCCCTCTGTCTTTCTTCTCCAGGTCATGTTCATaGCGTCAAAGAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: QSPFESFLKYFSSPLSFFSRSCS*RQRGGI
Trigger: AATCCCTCCTCTTTGACGCAATGAACATGACCTGGA...GAAGAAAGACAGAGGGCTGGAAAAGTATTTCAGGAAGCTCTCAAAGGGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CAA 90 bp CAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACATCCAGGTCATGTTCATaGCGTCAAAGAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: QEAHGEVNQIFYRTHTLTSRSCS*RQRGGI
Trigger: AATCCCTCCTCTTTGACGCAATGAACATGACCTGGA...TGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CAA 90 bp AGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGGGAAGACACAGGGAAGGCTTTaGACCTTTAAAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSQSNFLSHTHTDTHTGKTQGRL*TFKGSC
Trigger: GCAGCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTGT...CTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CAA 90 bp ACAGGAAGCCCACGGAGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACAAAACATCTCGACTaGCAGAGTGGAAGGATCACT +
Preference number: 5 (lower is better)
Translates to: TGSPRRSQSNFLSHTHTDTKHLD*QSGRIT
Trigger: AGTGATCCTTCCACTCTGCAAGTCGAGATGTTTTGT...GTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCTCCGTGGGCTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CAA 90 bp CCCATTAAAACTAACAGGATGAATGCCCCCAGGATGATCCATCTATCTGGTAGACCGTTCTGCTTCACGTaGACAAAACATCTCGACTTG +
Preference number: 5 (lower is better)
Translates to: PIKTNRMNAPRMIHLSGRPFCFT*TKHLDL
Trigger: CAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGG...TCTACCAGATAGATGGATCATCCTGGGGGCATTCATCCTGTTAGTTTTAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS-3UTR CAA 90 bp ACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACTTTATTCCAATGCACTGTCGGTTCTGGCATaGCCTCCCAGTGCCCTAAGA +
Preference number: 5 (lower is better)
Translates to: TVSSAISGCLKTVLYSNALSVLA*PPSALR
Trigger: TCTTAGGGCACTGGGAGGCAATGCCAGAACCGACAG...TGCATTGGAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp AGAAGTCAATCAAATTTTCTATCGCACACACACACTGACACCCACACAGGGAAGGTCTTTATCTGGGGTTaGATGTCACAAAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: RSQSNFLSHTHTDTHTGKVFIWG*MSQRSI
Trigger: GATGCTCCTTTGTGACATCAAACCCCAGATAAAGAC...CTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAATTTGATTGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS-3UTR CAA 90 bp TGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTCACTTCTCCCAGCGTTaGGGTCAATTCTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: CSHNLYSQFCYIRLFENRHFSQR*GQFSPS
Trigger: ACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGTG...ACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp ACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACTTTATTCCAATGCACCGTTCTGCTTCACGTaGACAAAACATCTCGACTTG +
Preference number: 5 (lower is better)
Translates to: TVSSAISGCLKTVLYSNAPFCFT*TKHLDL
Trigger: CAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGG...TGCATTGGAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp ACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACCGTACTTTATTCCAATGCAGTCTTTATCTGGGGTTaGATGTCACAAAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: TVSSAISGCLKTVLYSNAVFIWG*MSQRSI
Trigger: GATGCTCCTTTGTGACATCAAACCCCAGATAAAGAC...TGCATTGGAATAAAGTACGGTTTTCAAACAACCTGATATAGCAGAACTGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS-3UTR CAA 90 bp CTGTGCTCACATAATTTATACAGTCAGTTCTGCTATATCAGGTTGTTTGAAAACTCCAGGTCATGTTCATaGCGTCAAAGAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: LCSHNLYSQFCYIRLFENSRSCS*RQRGGI
Trigger: AATCCCTCCTCTTTGACGCAATGAACATGACCTGGA...GTTTTCAAACAACCTGATATAGCAGAACTGACTGTATAAATTATGTGAGCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS TCA 72 bp TGGGAGCCAAGGCTGTCAGCGATCGAGGACCACAGGTaGACAACTCTGCGCCGCCGTGGTATCACCTCTAGG +
Preference number: 6 (lower is better)
Translates to: WEPRLSAIEDHR*TTLRRRGITSR
Trigger: CCTAGAGGTGATACCACGGCGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCCTTGGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS GCA 72 bp GGCTGTCAGCGATCGAGGACCACAGGTGAACAACTCTaGGCCGCCGTGGTATCACCTCTAGGTGGATCTTCT +
Preference number: 6 (lower is better)
Translates to: GCQRSRTTGEQL*AAVVSPLGGSS
Trigger: AGAAGATCCACCTAGAGGTGATACCACGGCGGCGCAGAGTTGTTCACCTGTGGTCCTCGATCGCTGACAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532335.5
CDS CCA 72 bp GAAGTCCAAGATCAAGGTGTCAGCAGGTCCGGTATCTaGCGAGGGCCCTCTCTTCCTCACCAGATGGCTGTC +
Preference number: 6 (lower is better)
Translates to: EVQDQGVSRSGI*RGPSLPHQMAV
Trigger: GACAGCCATCTGGTGAGGAAGAGAGGGCCCTCGCCAGATACCGGACCTGCTGACACCTTGATCTTGGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524905.1
ENST00000531073.1
ENST00000532335.5
CDS CCA 72 bp AGCATCCTGAGGTCTCGCCCCACTTCTCCCAGCGTTTaGGTCAATTCTCCCCAAGTGCTGGTGGCATATACC +
Preference number: 6 (lower is better)
Translates to: SILRSRPTSPSV*VNSPQVLVAYT
Trigger: GGTATATGCCACCAGCACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGTGGGGCGAGACCTCAGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 72 bp GAGCATCCTGAGGTCTCGCCCCACTTCTCCCAGCGTTaGGGTCAATTCTCCCCAAGTGCTGGTGGCATATAC +
Preference number: 6 (lower is better)
Translates to: EHPEVSPHFSQR*GQFSPSAGGIY
Trigger: GTATATGCCACCAGCACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGTGGGGCGAGACCTCAGGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 90 bp GTCACAAAGGAGCATCCTGAGGTCTCGCCCCACTTCTCCCAGCGTTaGGGTCAATTCTCCCCAAGTGCTGGTGGCATATACCTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: VTKEHPEVSPHFSQR*GQFSPSAGGIYLLP
Trigger: GGGAAGAAGGTATATGCCACCAGCACTTGGGGAGAATTGACCCAAACGCTGGGAGAAGTGGGGCGAGACCTCAGGATGCTCCTTTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 90 bp ATCTGGCGAGGGCCCTCTCTTCCTCACCAGATGGCTGTCTTCCTGTaGTATCCTCACACAGTGGAGAGCAGAGACAGACAGCAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: IWRGPSLPHQMAVFL*YPHTVESRDRQQAL
Trigger: GAGAGCTTGCTGTCTGTCTCTGCTCTCCACTGTGTGAGGATACAACAGGAAGACAGCCATCTGGTGAGGAAGAGAGGGCCCTCGCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524905.1
ENST00000531073.1
ENST00000532335.5
CDS CAA 72 bp GGGCCCTCTCTTCCTCACCAGATGGCTGTCTTCCTGTaGTATCCTCACACAGTGGAGAGCAGAGACAGACAG +
Preference number: 6 (lower is better)
Translates to: GPSLPHQMAVFL*YPHTVESRDRQ
Trigger: CTGTCTGTCTCTGCTCTCCACTGTGTGAGGATACAACAGGAAGACAGCCATCTGGTGAGGAAGAGAGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524905.1
ENST00000531073.1
ENST00000532335.5
CDS CAA 90 bp GGTGGCGAACTGCCAGGATGCACCAGTGCACCGTTCTGCTTCACGTaGACAAAACATCTCGACTTGCAGAGTGGAAGGATCTTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: GGELPGCTSAPFCFT*TKHLDLQSGRIFFP
Trigger: GGGGAAGAAGATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS GCA 72 bp GGTGGCGAACTGCCAGGATGCACCAGTGCACCGTTCTaGTTCACGTTGACAAAACATCTCGACTTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: GGELPGCTSAPF*FTLTKHLDLQS
Trigger: ACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000392270.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 90 bp GGTGGCGAACTGCCAGGATGCACCAGTGCACCGTTCTGCTTCACGTaGACAAAACATCTCGACTTGCAGAGTGGAAGGATCACTGGTCTT +
Preference number: 6 (lower is better)
Translates to: GGELPGCTSAPFCFT*TKHLDLQSGRITGL
Trigger: AAGACCAGTGATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS TCA 72 bp AGCTGGGCGTGTACACATTCACCCTCACTGGTATGGTaGAGAAATGTTATCCAACAGCGTGGGTGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: SWACTHSPSLVW*RNVIQQRGCGH
Trigger: GTGCCCACACCCACGCTGTTGGATAACATTTCTTCACCATACCAGTGAGGGTGAATGTGTACACGCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS TCA 72 bp ACCCCCTTCCCACCTCACTTTTACAGCTGTCCCATTTaGTCATCAGACCCTGCTACCTTAGCCAGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: TPFPPHFYSCPI*SSDPATLASSG
Trigger: GCCTGAACTGGCTAAGGTAGCAGGGTCTGATGATCAAATGGGACAGCTGTAAAAGTGAGGTGGGAAGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS GCA 72 bp TCTCTCCATTGGTGGCGAACTGCCAGGATGCACCAGTaGACCGTTCTGCTTCACGTTGACAAAACATCTCGA +
Preference number: 6 (lower is better)
Translates to: SLHWWRTARMHQ*TVLLHVDKTSR
Trigger: TCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCACCAATGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000392270.3
ENST00000529948.1
ENST00000532335.5
CDS GCA 72 bp GAGGGATTTCTCTCCATTGGTGGCGAACTGCCAGGATaGACCAGTGCACCGTTCTGCTTCACGTTGACAAAA +
Preference number: 6 (lower is better)
Translates to: EGFLSIGGELPG*TSAPFCFTLTK
Trigger: TTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAGTTCGCCACCAATGGAGAGAAATCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000392270.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 72 bp TGCAGAGTGGAAGGATCACTGGTCTTTATCTGGGGTTaGATGTCACAAAGGAGCATCCTGAGGTCTCGCCCC +
Preference number: 6 (lower is better)
Translates to: CRVEGSLVFIWG*MSQRSILRSRP
Trigger: GGGGCGAGACCTCAGGATGCTCCTTTGTGACATCAAACCCCAGATAAAGACCAGTGATCCTTCCACTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 72 bp CTGCCAGGATGCACCAGTGCACCGTTCTGCTTCACGTaGACAAAACATCTCGACTTGCAGAGTGGAAGGATC +
Preference number: 6 (lower is better)
Translates to: LPGCTSAPFCFT*TKHLDLQSGRI
Trigger: GATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000392270.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 72 bp GACCCCCTTCCCACCTCACTTTTACAGCTGTCCCATTaGATCATCAGACCCTGCTACCTTAGCCAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: DPLPTSLLQLSH*IIRPCYLSQFR
Trigger: CCTGAACTGGCTAAGGTAGCAGGGTCTGATGATCAAATGGGACAGCTGTAAAAGTGAGGTGGGAAGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS TCA 72 bp TGCCAGGATGCACCAGTGCACCGTTCTGCTTCACGTTaGCAAAACATCTCGACTTGCAGAGTGGAAGGATCA +
Preference number: 6 (lower is better)
Translates to: CQDAPVHRSASR*QNISTCRVEGS
Trigger: TGATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS TCA 72 bp TGCCAGGATGCACCAGTGCACCGTTCTGCTTCACGTTaGCAAAACATCTCGACTTGCAGAGTGGAAGGATCT +
Preference number: 6 (lower is better)
Translates to: CQDAPVHRSASR*QNISTCRVEGS
Trigger: AGATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGCACTGGTGCATCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392270.3
CDS CCA 72 bp AGGCAGGAAGCTGGGCGTGTACACATTCACCCTCACTaGTATGGTGAAGAAATGTTATCCAACAGCGTGGGT +
Preference number: 6 (lower is better)
Translates to: RQEAGRVHIHPH*YGEEMLSNSVG
Trigger: ACCCACGCTGTTGGATAACATTTCTTCACCATACCAGTGAGGGTGAATGTGTACACGCCCAGCTTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS CCA 72 bp ACAGGGCTAGAAGTCAGGGATATTCTTCGCATACTGTaGAGAGTAACAGGCAGGAAGCTGGGCGTGTACACA +
Preference number: 6 (lower is better)
Translates to: TGLEVRDILRIL*RVTGRKLGVYT
Trigger: TGTGTACACGCCCAGCTTCCTGCCTGTTACTCTCCACAGTATGCGAAGAATATCCCTGACTTCTAGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS CCA 72 bp ACCAGATGGCTGTCTTCCTGTTGTATCCTCACACAGTaGAGAGCAGAGACAGACAGCAAGCTCTCCTATCAC +
Preference number: 6 (lower is better)
Translates to: TRWLSSCCILTQ*RAETDSKLSYH
Trigger: GTGATAGGAGAGCTTGCTGTCTGTCTCTGCTCTCCACTGTGTGAGGATACAACAGGAAGACAGCCATCTGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524905.1
ENST00000531073.1
ENST00000532335.5
CDS CAA 90 bp GTATCTGTAGACCCCCTTCCCACCTCACTTTTACAGCTGTCCCATTaGATCATCAGACCCTGCTACCTTAGCCAGTTCAGGCTGCTACAA +
Preference number: 6 (lower is better)
Translates to: VSVDPLPTSLLQLSH*IIRPCYLSQFRLLQ
Trigger: TTGTAGCAGCCTGAACTGGCTAAGGTAGCAGGGTCTGATGATCAAATGGGACAGCTGTAAAAGTGAGGTGGGAAGGGGGTCTACAGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS CAA 90 bp ATTTTCTATCGCACACACACACTGACACCCACACAGGGAAGGCTTTaGACCTTTAAAGGGAGCTGCCACATTCTCCCACCCAGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: IFYRTHTLTPTQGRL*TFKGSCHILPPSSV
Trigger: AACTGAGCTGGGTGGGAGAATGTGGCAGCTCCCTTTAAAGGTCAAAAGCCTTCCCTGTGTGGGTGTCAGTGTGTGTGTGCGATAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529948.1
CDS CAA 72 bp GCACCGTTCTGCTTCACGTTGACAAAACATCTCGACTaGCAGAGTGGAAGGATCACTGGTCTTTATCTGGGG +
Preference number: 6 (lower is better)
Translates to: APFCFTLTKHLD*QSGRITGLYLG
Trigger: CCCCAGATAAAGACCAGTGATCCTTCCACTCTGCAAGTCGAGATGTTTTGTCAACGTGAAGCAGAACGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS CAA 72 bp GTGGCATATACCTTCTTCCCCAGGAGGCCCAGAGGTTaGACCATGTTGTTGTCACTGTTGTACATGATCTCC +
Preference number: 6 (lower is better)
Translates to: VAYTFFPRRPRG*TMLLSLLYMIS
Trigger: GGAGATCATGTACAACAGTGACAACAACATGGTCAAACCTCTGGGCCTCCTGGGGAAGAAGGTATATGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367363.3
CDS CCA 72 bp GGTATGGTGAAGAAATGTTATCCAACAGCGTGGGTGTaGGCACTGCCCAAATTCTTTACCCTGGAACAACTG +
Preference number: 6 (lower is better)
Translates to: GMVKKCYPTAWV*ALPKFFTLEQL
Trigger: CAGTTGTTCCAGGGTAAAGAATTTGGGCAGTGCCCACACCCACGCTGTTGGATAACATTTCTTCACCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS CCA 72 bp CTCACTGGTATGGTGAAGAAATGTTATCCAACAGCGTaGGTGTGGGCACTGCCCAAATTCTTTACCCTGGAA +
Preference number: 6 (lower is better)
Translates to: LTGMVKKCYPTA*VWALPKFFTLE
Trigger: TTCCAGGGTAAAGAATTTGGGCAGTGCCCACACCCACGCTGTTGGATAACATTTCTTCACCATACCAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000531073.1
ENST00000532335.5
CDS CCA 72 bp TCGACTTGCAGAGTGGAAGGATCACTGGTCTTTATCTaGGGTTTGATGTCACAAAGGAGCATCCTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: STCRVEGSLVFI*GLMSQRSILRS
Trigger: AGACCTCAGGATGCTCCTTTGTGACATCAAACCCCAGATAAAGACCAGTGATCCTTCCACTCTGCAAGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357183.8
ENST00000367363.3
ENST00000529948.1
ENST00000532335.5
CDS CCA 72 bp CCAGATGAGTTTTGTAATAGACTCCAGCAGTCCTACTaGGGCCAAGACCTCAAGGAAAGCCAAGTCTATCAT +
Preference number: 6 (lower is better)
Translates to: PDEFCNRLQQSY*GQDLKESQVYH
Trigger: ATGATAGACTTGGCTTTCCTTGAGGTCTTGGCCCCAGTAGGACTGCTGGAGTCTATTACAAAACTCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS CAA 72 bp TTCTTCCCCAGGAGGCCCAGAGGTTTGACCATGTTGTaGTCACTGTTGTACATGATCTCCAAGGCTATTAGT +
Preference number: 6 (lower is better)
Translates to: FFPRRPRGLTML*SLLYMISKAIS
Trigger: ACTAATAGCCTTGGAGATCATGTACAACAGTGACAACAACATGGTCAAACCTCTGGGCCTCCTGGGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367363.3
CDS GCA 72 bp TCACTTTTACAGCTGTCCCATTTGATCATCAGACCCTaGTACCTTAGCCAGTTCAGGCTGCTACAACAGAAT +
Preference number: 6 (lower is better)
Translates to: SLLQLSHLIIRP*YLSQFRLLQQN
Trigger: ATTCTGTTGTAGCAGCCTGAACTGGCTAAGGTAGCAGGGTCTGATGATCAAATGGGACAGCTGTAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS CCA 72 bp AAACACCAAGCATTTATTTCTTACCTTCCTGGAAGATaGGAAGTCCAAGATCAAGGTGTCAGCAGGTCCGGT +
Preference number: 6 (lower is better)
Translates to: KHQAFISYLPGR*EVQDQGVSRSG
Trigger: ACCGGACCTGCTGACACCTTGATCTTGGACTTCCCATCTTCCAGGAAGGTAAGAAATAAATGCTTGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524905.1
CDS TCA 72 bp CCCAGAGGTTTGACCATGTTGTTGTCACTGTTGTACTaGAGGAAAAGATTTTTATTCAAGAAGACCTGCGCT +
Preference number: 6 (lower is better)
Translates to: PRGLTMLLSLLY*RKRFLFKKTCA
Trigger: AGCGCAGGTCTTCTTGAATAAAAATCTTTTCCTTCAGTACAACAGTGACAACAACATGGTCAAACCTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357183.8
ENST00000392270.3
ENST00000529948.1
ENST00000531073.1
ENST00000532335.5