RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101146

Ensembl transcript IDs: ENST00000371242.6, ENST00000395840.6, ENST00000395841.7, ENST00000411894.5, ENST00000429339.5, ENST00000452119.1, ENST00000462438.1, ENST00000492498.5, ENST00000527947.5

Found 461 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTaGGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTC +
Preference number: 1 (lower is better)
Translates to: LPTRAHRGCRSAQQK*AQLGTPFPLRLPHF
Trigger: GAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 90 bp ATGGAGAGACGGCAAGTCGCCGCGGACGCCTGGGCTCTCAGCTGCTaGACAATGACATCGTTTTCTCCAGGGGTTGAAATCCATGTCCAT +
Preference number: 1 (lower is better)
Translates to: MERRQVAADAWALSC*TMTSFSPGVEIHVH
Trigger: ATGGACATGGATTTCAACCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCAGGCGTCCGCGGCGACTTGCCGTCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR CCA 90 bp GGGGGCTTGGGTTCTAACTTGAAAGTCACGCAAGTGTCACCCACTTaGGCCTTAGGAGGTTACCCACAAATGGCCTGTCACCCAGCACAA +
Preference number: 1 (lower is better)
Translates to: GGLGSNLKVTQVSPT*ALGGYPQMACHPAQ
Trigger: TTGTGCTGGGTGACAGGCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAGTTAGAACCCAAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 90 bp CTGGGCTCTCAGCTGCTGAACAATGACATCGTTTTCTCCAGGGGTTaGAATCCATGTCCATGGCTGACAACCCAACAAGGCTGGGACCCA +
Preference number: 1 (lower is better)
Translates to: LGSQLLNNDIVFSRG*NPCPWLTTQQGWDP
Trigger: TGGGTCCCAGCCTTGTTGGGTTGTCAGCCATGGACATGGATTTCAACCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 90 bp TACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTaGGTCACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGG +
Preference number: 1 (lower is better)
Translates to: YPQMACHPAQVTVPI*VTRKSEQQGQKALG
Trigger: CCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGTGACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR GCA 90 bp CTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTCTaGAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGCGGACGC +
Preference number: 1 (lower is better)
Translates to: LTSTITSTPLVTEKL*NRQWNGETASRRGR
Trigger: GCGTCCGCGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR GCA 90 bp GGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTaGAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGC +
Preference number: 1 (lower is better)
Translates to: GIFVPEAESTIRSHS*KGAMNRMERDSIYR
Trigger: GCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
3UTR TCA 90 bp ACAATGACATCGTTTTCTCCAGGGGTTGAAATCCATGTCCATGGCTaGCAACCCAACAAGGCTGGGACCCAAATTCGTACAGAGATGAGG +
Preference number: 1 (lower is better)
Translates to: TMTSFSPGVEIHVHG*QPNKAGTQIRTEMR
Trigger: CCTCATCTCTGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGTCAGCCATGGACATGGATTTCAACCCCTGGAGAAAACGATGTCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR GCA 90 bp ATATTCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTAC +
Preference number: 1 (lower is better)
Translates to: IFSNTYTEALQNPWR*PQSNVYNNLNPLSY
Trigger: GTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR GCA 90 bp TCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTaGAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATAACC +
Preference number: 1 (lower is better)
Translates to: SQTLFQYSLTRTLKR*KIPGGARNLTSTIT
Trigger: GGTTATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR CCA 90 bp TTTCCAATATTCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTaGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTT +
Preference number: 1 (lower is better)
Translates to: FPIFSNTYTEALQNP*RCPQSNVYNNLNPL
Trigger: AAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 90 bp ACCAGTCGTAGCTGGAAGCGTATGCAAATATGTTTCCATTGTGATTaGAACAGCAAGCTGAGATGGGCTGATCTAACTGTTCCGAAGTTT +
Preference number: 1 (lower is better)
Translates to: TSRSWKRMQICFHCD*NSKLRWADLTVPKF
Trigger: AAACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTGCTGTTTCAATCACAATGGAAACATATTTGCATACGCTTCCAGCTACGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
3UTR-3UTR TCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCCTCAAAACCCCACGCTaGTGCTGGGCAGGACGCATG +
Preference number: 2 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERLKTPR*CWAGRM
Trigger: CATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAG...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCATCCATGTCCATGGCTaGCAACCCAACAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERIHVHG*QPNKAG
Trigger: CCCAGCCTTGTTGGGTTGTCAGCCATGGACATGGAT...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCCAGGACGCATGTTCCTaGGGTTACGGGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSQDACS*GYGVGK
Trigger: CTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTG...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGTCAGCTGCTGAACAATaGCATCGTTTTCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWSAAEQ*HRFLQG
Trigger: CCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGA...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCTGGGCTCTCAGCTGCTaGACAATGACATCGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERWALSC*TMTSFS
Trigger: AGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCA...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTCAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTAC +
Preference number: 2 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLQNPWR*PQSNVY
Trigger: GTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTG...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAACGTACACTGAAGCGCTaGAAAATCCCTGGCGGTGCC +
Preference number: 2 (lower is better)
Translates to: LMLGRTHVPEVTGWARGERTLKR*KIPGGA
Trigger: GGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACG...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTGCGCTGCAAAATCCCTaGCGGTGCCCGCAATCTAAC +
Preference number: 2 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCALQNP*RCPQSN
Trigger: GTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGC...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAAATTCGTACAGAGATaGGGCAGAGTGGAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERKFVQR*GRVERN
Trigger: GTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTT...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAAATCCATGTCCATGGCTaGCAACCCAACAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LMLGRTHVPEVTGWARGEIHVHG*QPNKAG
Trigger: CCCAGCCTTGTTGGGTTGTCAGCCATGGACATGGAT...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAACAACCCAACAAGGCTaGGACCCAAATTCGTACAGA +
Preference number: 2 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAATTQQG*DPNSYR
Trigger: TCTGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGT...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAACTCTGCAACAGGCAGTaGAATGGAGAGACGGCAAGT +
Preference number: 2 (lower is better)
Translates to: LMLGRTHVPEVTGWARGELCNRQ*NGETAS
Trigger: ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAG...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAATCAGCTGCTGAACAATaGCATCGTTTTCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: LMLGRTHVPEVTGWARGESAAEQ*HRFLQG
Trigger: CCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGA...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTGTTACAGAAAAACTCTaGAACAGGCAGTGGAATGGA +
Preference number: 2 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLVTEKL*NRQWNG
Trigger: TCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAAC...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATAGGGCTCACAGAGGCTaGCGTTCCGCGCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LESHASVTHLGLRRLPTNRAHRG*RSAQQK
Trigger: CTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCT...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAAGGGCTCACAGAGGCTaGCGTTCCGCGCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: TRKSEQQGQKALGILKMGRAHRG*RSAQQK
Trigger: CTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCT...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTCAGGACGCATGTTCCTaGGGTTACGGGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSQDACS*GYGVGK
Trigger: CTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTG...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGACTCAAAACCCCACGCTaGTGCTGGGCAGGACGCATG +
Preference number: 2 (lower is better)
Translates to: TRKSEQQGQKALGILKMGLKTPR*CWAGRM
Trigger: CATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAG...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATCAACAGGCAGTGGAATaGAGAGACGGCAAGTCGCCG +
Preference number: 2 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNQQAVE*RDGKSP
Trigger: CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTG...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTATCCATGTCCATGGCTaGCAACCCAACAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPIHVHG*QPNKAG
Trigger: CCCAGCCTTGTTGGGTTGTCAGCCATGGACATGGAT...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCAGTCACTCGGAAATCTaGGCAGCAAGGCCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGSHSEI*AARPES
Trigger: GCTTTCTGGCCTTGCTGCTCAGATTTCCGAGTGACT...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTGTTACAGAAAAACTCTaGAACAGGCAGTGGAATGGA +
Preference number: 2 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCVTEKL*NRQWNG
Trigger: TCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAAC...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR CAA 90 bp GTAAGAGTTCAGGGCAATTCCCATGCAGGGGGCTTGGGTTCTAACTaGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTAC +
Preference number: 2 (lower is better)
Translates to: VRVQGNSHAGGLGSN*KVTQVSPTWALGGY
Trigger: GTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAGTTAGAACCCAAGCCCCCTGCATGGGAATTGCCCTGAACTCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCGTTTTCTCCAGGGGTTaGAATCCATGTCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGVFSRG*NPCPWL
Trigger: CAGCCATGGACATGGATTTCAACCCCTGGAGAAAAC...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGTGGGCTCTCAGCTGCTaGACAATGACATCGTTTTCT +
Preference number: 2 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRWALSC*TMTSFS
Trigger: AGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCA...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTCTCTGCAACAGGCAGTaGAATGGAGAGACGGCAAGT +
Preference number: 2 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPLCNRQ*NGETAS
Trigger: ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAG...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATCAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTAC +
Preference number: 2 (lower is better)
Translates to: LESHASVTHLGLRRLPTNQNPWR*PQSNVY
Trigger: GTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTG...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR GCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGACAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTAC +
Preference number: 2 (lower is better)
Translates to: TRKSEQQGQKALGILKMGQNPWR*PQSNVY
Trigger: GTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTG...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGACTCTGCAACAGGCAGTaGAATGGAGAGACGGCAAGT +
Preference number: 2 (lower is better)
Translates to: TRKSEQQGQKALGILKMGLCNRQ*NGETAS
Trigger: ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAG...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGGTTTTCTCCAGGGGTTaGAATCCATGTCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALVFSRG*NPCPWL
Trigger: CAGCCATGGACATGGATTTCAACCCCTGGAGAAAAC...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAGTTTTCTCCAGGGGTTaGAATCCATGTCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: TRKSEQQGQKALGILKMGVFSRG*NPCPWL
Trigger: CAGCCATGGACATGGATTTCAACCCCTGGAGAAAAC...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGATCAGCTGCTGAACAATaGCATCGTTTTCTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: TRKSEQQGQKALGILKMGSAAEQ*HRFLQG
Trigger: CCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGA...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATTGGGCTCTCAGCTGCTaGACAATGACATCGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LESHASVTHLGLRRLPTNWALSC*TMTSFS
Trigger: AGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCA...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATTTCCCAGAGGGTGTCTaGAATCTCAACTCAAAACCC +
Preference number: 2 (lower is better)
Translates to: LESHASVTHLGLRRLPTNFPEGV*NLNSKP
Trigger: GGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGAA...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAACAACCCAACAAGGCTaGGACCCAAATTCGTACAGA +
Preference number: 2 (lower is better)
Translates to: TRKSEQQGQKALGILKMGTTQQG*DPNSYR
Trigger: TCTGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGT...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAACAACCCAACAAGGCTaGGACCCAAATTCGTACAGA +
Preference number: 2 (lower is better)
Translates to: GGARNLTSTITSTPLVTETTQQG*DPNSYR
Trigger: TCTGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGT...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTCAACAGGCAGTGGAATaGAGAGACGGCAAGTCGCCG +
Preference number: 2 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTQQAVE*RDGKSP
Trigger: CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTG...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR TCA 90 bp CTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGAATGTCCTGAGGAGCTaGAGTGTTGGTTCCATTAGA +
Preference number: 2 (lower is better)
Translates to: LASLSQKLNLPSDPTVARNVLRS*SVGSIR
Trigger: TCTAATGGAACCAACACTTCAGCTCCTCAGGACATT...CCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
3UTR-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTAAATTCGTACAGAGATaGGGCAGAGTGGAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTKFVQR*GRVERN
Trigger: GTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTT...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CAA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCCCCTTTCCCCTAAGGTaGCCGCATTTCCCAGAGGGT +
Preference number: 3 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERPFPLR*PHFPEG
Trigger: ACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGG...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 72 bp CGGCAAGTCGCCGCGGACGCCTGGGCTCTCAGCTGCTaGACAATGACATCGTTTTCTCCAGGGGTTGAAATC +
Preference number: 3 (lower is better)
Translates to: RQVAADAWALSC*TMTSFSPGVEI
Trigger: GATTTCAACCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCAGGCGTCCGCGGCGACTTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR CCA 72 bp CTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATaGAGAGACGGCAAGTCGCCGCGGACGCCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: LSYRKTLQQAVE*RDGKSPRTPGL
Trigger: GAGCCCAGGCGTCCGCGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 72 bp AGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTaGTGCTGGGCAGGACGCATGTTCCTGAGGTTACGG +
Preference number: 3 (lower is better)
Translates to: RGCLKSQLKTPR*CWAGRMFLRLR
Trigger: CCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CAA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGCGTTTTCTCCAGGGGTaGAAATCCATGTCCATGGCT +
Preference number: 3 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRRFLQG*KSMSMA
Trigger: AGCCATGGACATGGATTTCAACCCCTGGAGAAAACG...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR GCA 72 bp AACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTACAATAACCTCAACCCC +
Preference number: 3 (lower is better)
Translates to: NTYTEALQNPWR*PQSNVYNNLNP
Trigger: GGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR GCA 72 bp GTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTaGAAGGGTGCCATGAACAGGATGGAACGCGATTCC +
Preference number: 3 (lower is better)
Translates to: VPEAESTIRSHS*KGAMNRMERDS
Trigger: GGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
3UTR TCA 72 bp ATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTaGGTCACTCGGAAATCTGAGCAGCAAGGCCAGAAA +
Preference number: 3 (lower is better)
Translates to: MACHPAQVTVPI*VTRKSEQQGQK
Trigger: TTTCTGGCCTTGCTGCTCAGATTTCCGAGTGACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR CCA 72 bp GGTTCTAACTTGAAAGTCACGCAAGTGTCACCCACTTaGGCCTTAGGAGGTTACCCACAAATGGCCTGTCAC +
Preference number: 3 (lower is better)
Translates to: GSNLKVTQVSPT*ALGGYPQMACH
Trigger: GTGACAGGCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAGTTAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 72 bp TCGTTTTCTCCAGGGGTTGAAATCCATGTCCATGGCTaGCAACCCAACAAGGCTGGGACCCAAATTCGTACA +
Preference number: 3 (lower is better)
Translates to: SFSPGVEIHVHG*QPNKAGTQIRT
Trigger: TGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGTCAGCCATGGACATGGATTTCAACCCCTGGAGAAAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 72 bp CAGCTGCTGAACAATGACATCGTTTTCTCCAGGGGTTaGAATCCATGTCCATGGCTGACAACCCAACAAGGC +
Preference number: 3 (lower is better)
Translates to: QLLNNDIVFSRG*NPCPWLTTQQG
Trigger: GCCTTGTTGGGTTGTCAGCCATGGACATGGATTTCAACCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR CCA 72 bp TTCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTaGCGGTGCCCGCAATCTAACGTCTACAATAACCTC +
Preference number: 3 (lower is better)
Translates to: FSNTYTEALQNP*RCPQSNVYNNL
Trigger: GAGGTTATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CAA 90 bp CCCTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGTTTTCTCCAGGGGTaGAAATCCATGTCCATGGCT +
Preference number: 3 (lower is better)
Translates to: PLVTEKLCNRQWNGETASRFLQG*KSMSMA
Trigger: AGCCATGGACATGGATTTCAACCCCTGGAGAAAACG...ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR GCA 72 bp CTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTaGAAAATCCCTGGCGGTGCCCGCAATCTAACGTCT +
Preference number: 3 (lower is better)
Translates to: LFQYSLTRTLKR*KIPGGARNLTS
Trigger: AGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR-3UTR CAA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATAAAGCACTGGGGATTTaGAAGATGGGAATGAGGGAA +
Preference number: 3 (lower is better)
Translates to: LESHASVTHLGLRRLPTNKALGI*KMGMRE
Trigger: TTCCCTCATTCCCATCTTCAAAATCCCCAGTGCTTT...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
3UTR TCA 72 bp TTTTTAGTTTTGTTCTGGCATCTTTGTCCCAGAAGCTaGATCTACCATCAGATCCCACAGTTGCAAGGGTGC +
Preference number: 3 (lower is better)
Translates to: FLVLFWHLCPRS*IYHQIPQLQGC
Trigger: GCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAAACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492498.5
3UTR TCA 72 bp CGCGATTCCATTTACCGCATAAATGTCCTGAGGAGCTaGAGTGTTGGTTCCATTAGATCGATGACATTTAAA +
Preference number: 3 (lower is better)
Translates to: RDSIYRINVLRS*SVGSIRSMTFK
Trigger: TTTAAATGTCATCGATCTAATGGAACCAACACTTCAGCTCCTCAGGACATTTATGCGGTAAATGGAATCGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATCCGCGCAGCAGAAGTaGGCGCAGCTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAASAQQK*AQLGTP
Trigger: GGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGA...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCGCGCAGCAGAAGTaGGCGCAGCTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLSAQQK*AQLGTP
Trigger: GGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGA...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGCAGGACGCATGTTCCTaGGGTTACGGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWQDACS*GYGVGK
Trigger: CTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTG...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGTCAGGGCAATTCCCATaGAGGGGACCGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWSGQFP*RGPGWV
Trigger: TACCCACCCCGGTCCCCTGCATGGGAATTGCCCTGA...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAGGCCATTTCCAGCTCTaGCCTCGCTTCCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAAGHFQL*PRFQGP
Trigger: TGGGCCCTGGAAGCGAGGTCAGAGCTGGAAATGGCC...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR GCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCCGTACACTGAAGCGCTaGAAAATCCCTGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERRTLKR*KIPGGA
Trigger: GGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACG...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGCAACAGGCAGTGGAATaGAGAGACGGCAAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWQQAVE*RDGKSP
Trigger: CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTG...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCGCGCTGCAAAATCCCTaGCGGTGCCCGCAATCTAAC +
Preference number: 4 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERALQNP*RCPQSN
Trigger: GTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGC...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGTGCAGGGGACCGGGGTaGGTAAGAGTTCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWCRGPG*VRVQGN
Trigger: ATTGCCCTGAACTCTTACCCACCCCGGTCCCCTGCA...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGTGCATTAACGCAATGTaGCCCTTCCCAGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWCINAM*PFPEAQ
Trigger: CTGAGCCTCTGGGAAGGGTCACATTGCGTTAATGCA...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR GCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGCCTGCGGTAGAAACTaGCCTGACTACCGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARACGRN*PDYRGN
Trigger: GTTTCCGCGGTAGTCAGGGCAGTTTCTACCGCAGGC...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371242.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCCTGCGGTAGAAACTaGCCTGACTACCGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSACGRN*PDYRGN
Trigger: GTTTCCGCGGTAGTCAGGGCAGTTTCTACCGCAGGC...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371242.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTAGGGCTCACAGAGGCTaGCGTTCCGCGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCRAHRG*RSAQQK
Trigger: CTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCT...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCGCGATCTGTATCGCTTaGTTACTGCTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERAICIA*LLLRSH
Trigger: GTGGGACCTCAGCAGTAACCAAGCGATACAGATCGC...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCCTCTGCAACAGGCAGTaGAATGGAGAGACGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERLCNRQ*NGETAS
Trigger: ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAG...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCAGAAACAACTCTGGCTaGGCCAGAGTCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSRNNSG*ARVSSH
Trigger: GTGGCTGGAGACTCTGGCTCAGCCAGAGTTGTTTCT...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAACTCAAAACCCCACGCTaGTGCTGGGCAGGACGCATG +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGELKTPR*CWAGRM
Trigger: CATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAG...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGTTGCACTGCCAAACATaGTGGTCCCACTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWLHCQT*WSHWFQ
Trigger: TTGGAACCAGTGGGACCAGCATGTTTGGCAGTGCAA...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAAGCCCCTCTCTGCAGTTaGCACCACAGCCATGGGGTA +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGEAPLCS*HHSHGV
Trigger: TACCCCATGGCTGTGGTGGCAACTGCAGAGAGGGGC...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAAATCAGGCCCCTCTCTaGAGTTGCCACCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAANQAPL*SCHHSH
Trigger: ATGGCTGTGGTGGCAACTGCAGAGAGGGGCCTGATT...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTAATCAGGCCCCTCTCTaGAGTTGCCACCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLNQAPL*SCHHSH
Trigger: ATGGCTGTGGTGGCAACTGCAGAGAGGGGCCTGATT...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATCGCTTGGTTACTGCTaGGGTCCCACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAASLGYC*GPTFWQ
Trigger: CTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGA...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGTCGCTTGGTTACTGCTaGGGTCCCACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARSLGYC*GPTFWQ
Trigger: CTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGA...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTGTTGCAAGGGTGCCATaGACAGGATGGAACGCGATT +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLVARVP*TGWNAI
Trigger: AATCGCGTTCCATCCTGTTCATGGCACCCTTGCAAC...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGTGGGCTCTCAGCTGCTaGACAATGACATCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWWALSC*TMTSFS
Trigger: AGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCA...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTATCCGCGCAGCAGAAGTaGGCGCAGCTGGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLSAQQK*AQLGTP
Trigger: GGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGA...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCACCAAACAACCACTACTaGGGGTTCAGGGCAATTCCC +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAAPNNHY*GFRAIP
Trigger: GGGAATTGCCCTGAACCCTCAGTAGTGGTTGTTTGG...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGCAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTAC +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARQNPWR*PQSNVY
Trigger: GTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTG...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTGTTCCCCGGCAAGGTTaGTGGGCTAAAAGACAGACA +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLVPRQG*WAKRQT
Trigger: TGTCTGTCTTTTAGCCCACCAACCTTGCCGGGGAAC...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAGCGATCTGTATCGCTTaGTTACTGCTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAAAICIA*LLLRSH
Trigger: GTGGGACCTCAGCAGTAACCAAGCGATACAGATCGC...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCACAACCCAACAAGGCTaGGACCCAAATTCGTACAGA +
Preference number: 4 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERTTQQG*DPNSYR
Trigger: TCTGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGT...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAAGCGCTGCAAAATCCCTaGCGGTGCCCGCAATCTAAC +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGEALQNP*RCPQSN
Trigger: GTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGC...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCCAAGTGTCACCCACTTaGGCCTTAGGAGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSQVSPT*ALGGYP
Trigger: TGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTG...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGAATGTCCTGAGGAGCTaGAGTGTTGGTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWNVLRS*SVGSIR
Trigger: TCTAATGGAACCAACACTTCAGCTCCTCAGGACATT...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGATCAGATCCCACAGTTaGAAGGGTGCCATGAACAGG +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARIRSHS*KGAMNR
Trigger: CCTGTTCATGGCACCCTTGCAACTGTGGGATCTGAT...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCCCAGTGTGCATCTGCTaGGCTTTTGGAATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSPVCIC*AFGMVC
Trigger: ACAGACCATTCCAAAAGCCCAGCAGATGCACACTGG...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGCCAGTGTGCATCTGCTaGGCTTTTGGAATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARPVCIC*AFGMVC
Trigger: ACAGACCATTCCAAAAGCCCAGCAGATGCACACTGG...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCCTTTGTCCCAGAAGCTaGATCTACCATCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSLCPRS*IYHQIP
Trigger: TGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAG...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTCAAGCTGAGATGGGCTaGTCTAACTGTTCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLQAEMG*SNCSEV
Trigger: AACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTG...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATGGGCTCTCAGCTGCTaGACAATGACATCGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAAWALSC*TMTSFS
Trigger: AGAAAACGATGTCATTGTTCAGCAGCTGAGAGCCCA...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCTTCCCAGAGGGTGTCTaGAATCTCAACTCAAAACCC +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSFPEGV*NLNSKP
Trigger: GGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGAA...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAAAGTCACTCGGAAATCTaGGCAGCAAGGCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGESHSEI*AARPES
Trigger: GCTTTCTGGCCTTGCTGCTCAGATTTCCGAGTGACT...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAGTAACAGTCCCCATTTaGGTCACTCGGAAATCTGAG +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAAVTVPI*VTRKSE
Trigger: CTCAGATTTCCGAGTGACTCAAATGGGGACTGTTAC...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGTAACAGTCCCCATTTaGGTCACTCGGAAATCTGAG +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSVTVPI*VTRKSE
Trigger: CTCAGATTTCCGAGTGACTCAAATGGGGACTGTTAC...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCCGGAAACAACGCGCGTaGGCCCTGGAGCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGRKQRA*ALEPLP
Trigger: AGGAAGTGGCTCCAGGGCGCACGCGCGTTGTTTCCG...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371242.6
CDS-3UTR GCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAAGGAGCATCATGCTGTaGGATCTGTATCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAARSIML*DLYRLV
Trigger: AACCAAGCGATACAGATCGCACAGCATGATGCTCCT...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAACAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTAC +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGEQNPWR*PQSNVY
Trigger: GTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTG...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCTCAGAGACTGGTAACTaGTACGAAAGAAATGGAGCA +
Preference number: 4 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERSETGN*YERNGA
Trigger: TGCTCCATTTCTTTCGTAGCAGTTACCAGTCTCTGA...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR CCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGAACAGCAAGCTGAGATaGGCTGATCTAACTGTTCCG +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARNSKLR*ADLTVP
Trigger: CGGAACAGTTAGATCAGCCCATCTCAGCTTGCTGTT...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCAACAGCAAGCTGAGATaGGCTGATCTAACTGTTCCG +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSNSKLR*ADLTVP
Trigger: CGGAACAGTTAGATCAGCCCATCTCAGCTTGCTGTT...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCTTGACCAGTCGTAGCTaGAAGCGTATGCAAATATGT +
Preference number: 4 (lower is better)
Translates to: LCPPGLTEAAVPRSRSERLTSRS*KRMQIC
Trigger: ACATATTTGCATACGCTTCCAGCTACGACTGGTCAA...GCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTACAACCCAACAAGGCTaGGACCCAAATTCGTACAGA +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLTTQQG*DPNSYR
Trigger: TCTGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGT...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCCTGCTACGAAAGAAATaGAGCAGGTTGACGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSLLRKK*SRLTWK
Trigger: CTTCCACGTCAACCTGCTCCATTTCTTTCGTAGCAG...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR TCA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGAACCATCATAGGATTTaGCGATCGAGTATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWNHHRI*RSSIPK
Trigger: TTTTGGGATACTCGATCGTCAAATCCTATGATGGTT...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAAATGTCCTGAGGAGCTaGAGTGTTGGTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAANVLRS*SVGSIR
Trigger: TCTAATGGAACCAACACTTCAGCTCCTCAGGACATT...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTACAGGACGCATGTTCCTaGGGTTACGGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLQDACS*GYGVGK
Trigger: CTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTG...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCCTCAAAACCCCACGCTaGTGCTGGGCAGGACGCATG +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGLKTPR*CWAGRM
Trigger: CATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAG...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGCAAACAGGCTCATTTTaGACCTGGGGGTCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRQTGSF*TWGSRP
Trigger: GGGGCGAGACCCCCAGGTTCAAAATGAGCCTGTTTG...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395841.7
CDS-3UTR GCA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAGCCCCTCTCTGCAGTTaGCACCACAGCCATGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLAPLCS*HHSHGV
Trigger: TACCCCATGGCTGTGGTGGCAACTGCAGAGAGGGGC...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTACATGCTGGTCCCACTaGTTCCAAAACCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCTCWSH*FQNLRL
Trigger: CAACCTCAGGTTTTGGAACCAGTGGGACCAGCATGT...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGACTACTTCTTATTCCTaGGCTTTAGCTCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARTTSYS*ALALRL
Trigger: CAGCCGAAGAGCTAAAGCCCAGGAATAAGAAGTAGT...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTAAATTCATGTCCCTTTaGCCAGTCGTAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCKFMSL*PVVAGS
Trigger: GCTTCCAGCTACGACTGGTCAAAGGGACATGAATTT...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGAGTTTTATCACACGATaGCGTAAACACTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARSFITR*RKHFAP
Trigger: GGGAGCAAAGTGTTTACGGCATCGTGTGATAAAACT...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGAAGGGGACGCCCTTCTaGAAAGCGGCCAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPKGTPF*KAARES
Trigger: GCTTTCCCTGGCCGCTTTGCAGAAGGGCGTCCCCTT...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR CCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGCACACAGCTGTAGTTTaGAGCTTTGATCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARHTAVV*SFDPMD
Trigger: ATCCATTGGATCAAAGCTCCAAACTACAGCTGTGTG...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCCAACAGGCAGTGGAATaGAGAGACGGCAAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGQQAVE*RDGKSP
Trigger: CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTG...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGAGATTCTATCCTCCTaGATTCAGAAGGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWAREILSS*IQKVDS
Trigger: AGAATCAACCTTCTGAATTCAGGAGGATAGAATCTC...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCAGAAACAACTCTGGCTaGGCCAGAGTCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGRNNSG*ARVSSH
Trigger: GTGGCTGGAGACTCTGGCTCAGCCAGAGTTGTTTCT...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAAAAATTCGTACAGAGATaGGGCAGAGTGGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGEKFVQR*GRVERN
Trigger: GTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTT...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAACAGGACGCATGTTCCTaGGGTTACGGGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTEQDACS*GYGVGK
Trigger: CTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTG...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATCTCAAAACCCCACGCTaGTGCTGGGCAGGACGCATG +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNLKTPR*CWAGRM
Trigger: CATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAG...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTCACCTTTCAGGGAGTTaGAAAACCATCATAGGATTT +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLHLSGS*KTIIGF
Trigger: AAATCCTATGATGGTTTTGCAACTCCCTGAAAGGTG...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAGCCCCTCTCTGCAGTTaGCACCACAGCCATGGGGTA +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGAPLCS*HHSHGV
Trigger: TACCCCATGGCTGTGGTGGCAACTGCAGAGAGGGGC...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGTAGCTGGAAGCGTATaGAAATATGTTTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSVAGSV*KYVSIV
Trigger: CACAATGGAAACATATTTGCATACGCTTCCAGCTAC...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAATCAGGGCAATTCCCATaGAGGGGACCGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTESGQFP*RGPGWV
Trigger: TACCCACCCCGGTCCCCTGCATGGGAATTGCCCTGA...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGGTTCCCCGGCAAGGTTaGTGGGCTAAAAGACAGACA +
Preference number: 4 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRVPRQG*WAKRQT
Trigger: TGTCTGTCTTTTAGCCCACCAACCTTGCCGGGGAAC...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAATGCTGATGTTTCAGTaGAGATTCTATCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAAMLMFQ*RFYPPE
Trigger: TTCAGGAGGATAGAATCTCCACTGAAACATCAGCAT...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAAACTACTTCTTATTCCTaGGCTTTAGCTCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGETTSYS*ALALRL
Trigger: CAGCCGAAGAGCTAAAGCCCAGGAATAAGAAGTAGT...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGTTTGCGAACCTGCTCTaGCGCGAAGGACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALFANLL*REGRGP
Trigger: TGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAA...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395841.7
CDS-3UTR CCA 90 bp TTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGGTGCCATGTTTGCGAACCTGCTCTaGCGCGAAGGACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FVPEAESTIRSHSCKGAMFANLL*REGRGP
Trigger: TGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAA...CATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
3UTR CAA 72 bp CAGGGCAATTCCCATGCAGGGGGCTTGGGTTCTAACTaGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: QGNSHAGGLGSN*KVTQVSPTWAL
Trigger: TAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAGTTAGAACCCAAGCCCCCTGCATGGGAATTGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGAACATCATTAGCCCATaGTCCTGCAATAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARNIISP*SCNKKV
Trigger: AACTTTCTTATTGCAGGATCATGGGCTAATGATGTT...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTAACATCATTAGCCCATaGTCCTGCAATAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLNIISP*SCNKKV
Trigger: AACTTTCTTATTGCAGGATCATGGGCTAATGATGTT...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAATGTTTCCATTGTGATTaGAACAGCAAGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: LMLGRTHVPEVTGWARGECFHCD*NSKLRW
Trigger: CCATCTCAGCTTGCTGTTTCAATCACAATGGAAACA...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTTGTTTCCATTGTGATTaGAACAGCAAGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCCFHCD*NSKLRW
Trigger: CCATCTCAGCTTGCTGTTTCAATCACAATGGAAACA...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTAGAAACAACTCTGGCTaGGCCAGAGTCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPRNNSG*ARVSSH
Trigger: GTGGCTGGAGACTCTGGCTCAGCCAGAGTTGTTTCT...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGGTGCCATGCAAACAGGCTCATTTTaGACCTGGGGGTCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: FVPEAESTIRSHSCKGAMQTGSF*TWGSRP
Trigger: GGGGCGAGACCCCCAGGTTCAAAATGAGCCTGTTTG...CATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp GTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAGCCCCTCTCTGCAGTTaGCACCACAGCCATGGGGTA +
Preference number: 4 (lower is better)
Translates to: VLASLSQKLNLPSDPTVAAPLCS*HHSHGV
Trigger: TACCCCATGGCTGTGGTGGCAACTGCAGAGAGGGGC...TGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAACGTACACTGAAGCGCTaGAAAATCCCTGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTERTLKR*KIPGGA
Trigger: GGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACG...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGAACACATTCAAACTCTaGCCACCAGGGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRNTFKL*PPGLTE
Trigger: CTCTGTGAGCCCTGGTGGGCAGAGTTTGAATGTGTT...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATAGGAGTTTGCGAACCTaGTCTGGCGCGAAGGACGAG +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNRSLRT*SGAKDE
Trigger: CTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCT...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395841.7
CDS-3UTR GCA 90 bp GCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCCTGAGGAGCAGGAGTTTGCGAACCTaGTCTGGCGCGAAGGACGAG +
Preference number: 4 (lower is better)
Translates to: AMNRMERDSIYRINVLRSRSLRT*SGAKDE
Trigger: CTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCT...GCTCCTCAGGACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCTTGCCACCACAGCCATaGGGTATATCACGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGLPPQP*GISRQH
Trigger: GTGCTGACGTGATATACCCCATGGCTGTGGTGGCAA...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCGAGGTTACCCACAAATaGCCTGTCACCCAGCACAAG +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGEVTHK*PVTQHK
Trigger: CTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCTC...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCCAAGTGTCACCCACTTaGGCCTTAGGAGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGQVSPT*ALGGYP
Trigger: TGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTG...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTTGCAGGGGACCGGGGTaGGTAAGAGTTCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSCRGPG*VRVQGN
Trigger: ATTGCCCTGAACTCTTACCCACCCCGGTCCCCTGCA...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGTCGCTTGGTTACTGCTaGGGTCCCACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPSLGYC*GPTFWQ
Trigger: CTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGA...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TACCATCAGATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCTCGCTTGGTTACTGCTaGGGTCCCACATTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: YHQIPQLQGCHEQDGTRFSLGYC*GPTFWQ
Trigger: CTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGA...GAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCTGATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGGTTGCAAGGGTGCCATaGACAGGATGGAACGCGATT +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPVARVP*TGWNAI
Trigger: AATCGCGTTCCATCCTGTTCATGGCACCCTTGCAAC...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTGTTGCAAGGGTGCCATaGACAGGATGGAACGCGATT +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPVARVP*TGWNAI
Trigger: AATCGCGTTCCATCCTGTTCATGGCACCCTTGCAAC...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAATCCATGTCCATGGCTaGCAACCCAACAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTEIHVHG*QPNKAG
Trigger: CCCAGCCTTGTTGGGTTGTCAGCCATGGACATGGAT...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTATCAGCTGCTGAACAATaGCATCGTTTTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLSAAEQ*HRFLQG
Trigger: CCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGA...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGGTAACAGTCCCCATTTaGGTCACTCGGAAATCTGAG +
Preference number: 4 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRVTVPI*VTRKSE
Trigger: CTCAGATTTCCGAGTGACTCAAATGGGGACTGTTAC...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGGCTTGGGTTCTAACTTaGAAGTCACGCAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRAWVLT*KSRKCH
Trigger: GTGACACTTGCGTGACTTTCAAGTTAGAACCCAAGC...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTCCAAACAACCACTACTaGGGGTTCAGGGCAATTCCC +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPPNNHY*GFRAIP
Trigger: GGGAATTGCCCTGAACCCTCAGTAGTGGTTGTTTGG...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATCCAAACAACCACTACTaGGGGTTCAGGGCAATTCCC +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNPNNHY*GFRAIP
Trigger: GGGAATTGCCCTGAACCCTCAGTAGTGGTTGTTTGG...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAATCAGGCCCCTCTCTaGAGTTGCCACCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTENQAPL*SCHHSH
Trigger: ATGGCTGTGGTGGCAACTGCAGAGAGGGGCCTGATT...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGCCACAGTTGCAAGGGTaGCATGAACAGGATGGAACG +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPPQLQG*HEQDGT
Trigger: CGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGG...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTGTAGCTGGAAGCGTATaGAAATATGTTTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCVAGSV*KYVSIV
Trigger: CACAATGGAAACATATTTGCATACGCTTCCAGCTAC...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CCCTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGTACACTGAAGCGCTaGAAAATCCCTGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PLVTEKLCNRQWNGETASRTLKR*KIPGGA
Trigger: GGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACG...ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCAACACATTCAAACTCTaGCCACCAGGGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGNTFKL*PPGLTE
Trigger: CTCTGTGAGCCCTGGTGGGCAGAGTTTGAATGTGTT...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGATTTTGAACCTGCTCTaGCGCGAAGGACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALILNLL*REGRGP
Trigger: TGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCAAAAT...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371242.6
CDS-3UTR CCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTCCCCGGCAAGGTTGGTaGGCTAAAAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSPRQGW*AKRQTT
Trigger: GGTTGTCTGTCTTTTAGCCCACCAACCTTGCCGGGG...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGACCCCGGCAAGGTTGGTaGGCTAAAAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGPRQGW*AKRQTT
Trigger: GGTTGTCTGTCTTTTAGCCCACCAACCTTGCCGGGG...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCACCCCGGCAAGGTTGGTaGGCTAAAAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPPRQGW*AKRQTT
Trigger: GGTTGTCTGTCTTTTAGCCCACCAACCTTGCCGGGG...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGCCCCGGCAAGGTTGGTaGGCTAAAAGACAGACAACC +
Preference number: 4 (lower is better)
Translates to: LASLSQKLNLPSDPTVARPRQGW*AKRQTT
Trigger: GGTTGTCTGTCTTTTAGCCCACCAACCTTGCCGGGG...CCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGCTCTGCAACAGGCAGTaGAATGGAGAGACGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPLCNRQ*NGETAS
Trigger: ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAG...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACGTTGCAAGGGTGCCATaGACAGGATGGAACGCGATT +
Preference number: 4 (lower is better)
Translates to: RSHSCKGAMNRMERDSIYVARVP*TGWNAI
Trigger: AATCGCGTTCCATCCTGTTCATGGCACCCTTGCAAC...GTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTACTTTGTCCCAGAAGCTaGATCTACCATCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLLCPRS*IYHQIP
Trigger: TGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAG...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGGTTTTCTCCAGGGGTTaGAATCCATGTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPVFSRG*NPCPWL
Trigger: CAGCCATGGACATGGATTTCAACCCCTGGAGAAAAC...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATTCAGCTGCTGAACAATaGCATCGTTTTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNSAAEQ*HRFLQG
Trigger: CCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGA...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAAGTCACTCGGAAATCTaGGCAGCAAGGCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGSHSEI*AARPES
Trigger: GCTTTCTGGCCTTGCTGCTCAGATTTCCGAGTGACT...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAGCTTGGGTTCTAACTTaGAAGTCACGCAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLAWVLT*KSRKCH
Trigger: GTGACACTTGCGTGACTTTCAAGTTAGAACCCAAGC...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGGAGCTGACATGTATCTaGCGAGACGCCAGACGTGTA +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALELTCI*RDARRV
Trigger: TACACGTCTGGCGTCTCGTCAGATACATGTCAGCTC...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR TCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCCAAACAGGCTCATTTTaGACCTGGAGAAGTACTGCC +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGQTGSF*TWRSTA
Trigger: GGCAGTACTTCTCCAGGTTCAAAATGAGCCTGTTTG...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR GCA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCAGGAGCATCATGCTGTaGGATCTGTATCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGRSIML*DLYRLV
Trigger: AACCAAGCGATACAGATCGCACAGCATGATGCTCCT...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGCCACAGTTGCAAGGGTaGCATGAACAGGATGGAACG +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALPQLQG*HEQDGT
Trigger: CGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGG...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATCCACAGTTGCAAGGGTaGCATGAACAGGATGGAACG +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNPQLQG*HEQDGT
Trigger: CGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGG...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGCCACAGTTGCAAGGGTaGCATGAACAGGATGGAACG +
Preference number: 4 (lower is better)
Translates to: LASLSQKLNLPSDPTVARPQLQG*HEQDGT
Trigger: CGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGG...CCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATATCAGATCCCACAGTTaGAAGGGTGCCATGAACAGG +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNIRSHS*KGAMNR
Trigger: CCTGTTCATGGCACCCTTGCAACTGTGGGATCTGAT...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAACAAAATCCCTGGCGGTaGCCGCAATCTAACGTCTAC +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTEQNPWR*PQSNVY
Trigger: GTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTG...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTAGGGCTCACAGAGGCTaGCGTTCCGCGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTRAHRG*RSAQQK
Trigger: CTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCT...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAGTTCCCCGGCAAGGTTaGTGGGCTAAAAGACAGACA +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGVPRQG*WAKRQT
Trigger: TGTCTGTCTTTTAGCCCACCAACCTTGCCGGGGAAC...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAGCGATCTGTATCGCTTaGTTACTGCTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGAICIA*LLLRSH
Trigger: GTGGGACCTCAGCAGTAACCAAGCGATACAGATCGC...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTTTGCCACCACAGCCATaGGGTATATCACGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSLPPQP*GISRQH
Trigger: GTGCTGACGTGATATACCCCATGGCTGTGGTGGCAA...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAATTGCCACCACAGCCATaGGGTATATCACGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTELPPQP*GISRQH
Trigger: GTGCTGACGTGATATACCCCATGGCTGTGGTGGCAA...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGCTCTGCAACAGGCAGTaGAATGGAGAGACGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALLCNRQ*NGETAS
Trigger: ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAG...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCAGAGGTTACCCACAAATaGCCTGTCACCCAGCACAAG +
Preference number: 4 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPEVTHK*PVTQHK
Trigger: CTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCTC...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGAGGTTACCCACAAATaGCCTGTCACCCAGCACAAG +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNEVTHK*PVTQHK
Trigger: CTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCTC...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAACAAGTGTCACCCACTTaGGCCTTAGGAGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTEQVSPT*ALGGYP
Trigger: TGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTG...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp CCCTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCAAACAGGCTCATTTTaGACCTGCTCTGGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: PLVTEKLCNRQWNGETASQTGSF*TCSGAK
Trigger: CTTCGCGCCAGAGCAGGTTCAAAATGAGCCTGTTTG...ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371242.6
CDS-3UTR TCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGCAAGCTGAGATGGGCTaGTCTAACTGTTCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPQAEMG*SNCSEV
Trigger: AACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTG...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp ATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCAAGCTGAGATGGGCTaGTCTAACTGTTCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: IPQLQGCHEQDGTRFHLPQAEMG*SNCSEV
Trigger: AACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTG...CGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGTTCCCAGAGGGTGTCTaGAATCTCAACTCAAAACCC +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPFPEGV*NLNSKP
Trigger: GGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGAA...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TTTGTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGGGAGCAGAAGGGTCTaGGGAGTTTGCGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: FVLASLSQKLNLPSDPTVGSRRV*GVCEPA
Trigger: AGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCC...AACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATTTGCACTGCCAAACATaGTGGTCCCACTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNLHCQT*WSHWFQ
Trigger: TTGGAACCAGTGGGACCAGCATGTTTGGCAGTGCAA...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTAGGAGCATCATGCTGTaGGATCTGTATCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPRSIML*DLYRLV
Trigger: AACCAAGCGATACAGATCGCACAGCATGATGCTCCT...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTATCAGATCCCACAGTTaGAAGGGTGCCATGAACAGG +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSIRSHS*KGAMNR
Trigger: CCTGTTCATGGCACCCTTGCAACTGTGGGATCTGAT...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTAACACATTCAAACTCTaGCCACCAGGGCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSNTFKL*PPGLTE
Trigger: CTCTGTGAGCCCTGGTGGGCAGAGTTTGAATGTGTT...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTTCAGGGCAATTCCCATaGAGGGGACCGGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTSGQFP*RGPGWV
Trigger: TACCCACCCCGGTCCCCTGCATGGGAATTGCCCTGA...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATAACCTGGAGAAGTACTaGCTGTACGGTGGCACCTAT +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNNLEKY*LYGGTY
Trigger: ATAGGTGCCACCGTACAGGCAGTACTTCTCCAGGTT...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR CCA 90 bp AGATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACACATGCTGGTCCCACTaGTTCCAAAACCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RSHSCKGAMNRMERDSIYTCWSH*FQNLRL
Trigger: CAACCTCAGGTTTTGGAACCAGTGGGACCAGCATGT...GTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGACACTGCCAAACATGCTaGTCCCACTGGTTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGHCQTC*SHWFQN
Trigger: GTTTTGGAACCAGTGGGACCAGCATGTTTGGCAGTG...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCCTGGTTCCCCGGCAAGGTTaGTGGGCTAAAAGACAGACA +
Preference number: 4 (lower is better)
Translates to: KGAMNRMERDSIYRINVLVPRQG*WAKRQT
Trigger: TGTCTGTCTTTTAGCCCACCAACCTTGCCGGGGAAC...CAGGACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGGCTGGGCTTTTGGAATaGTCTGTCCACTGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPAGLLE*SVHCLE
Trigger: TTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGC...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATCCAGTGTGCATCTGCTaGGCTTTTGGAATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNPVCIC*AFGMVC
Trigger: ACAGACCATTCCAAAAGCCCAGCAGATGCACACTGG...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGCCAGTGTGCATCTGCTaGGCTTTTGGAATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LASLSQKLNLPSDPTVARPVCIC*AFGMVC
Trigger: ACAGACCATTCCAAAAGCCCAGCAGATGCACACTGG...CCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATAACAGCAAGCTGAGATaGGCTGATCTAACTGTTCCG +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNNSKLR*ADLTVP
Trigger: CGGAACAGTTAGATCAGCCCATCTCAGCTTGCTGTT...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGACTTTGTCCCAGAAGCTaGATCTACCATCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGLCPRS*IYHQIP
Trigger: TGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAG...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAATTCATGTCCCTTTaGCCAGTCGTAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTEKFMSL*PVVAGS
Trigger: GCTTCCAGCTACGACTGGTCAAAGGGACATGAATTT...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTGGGAGCAGAAGGGTCTaGGGAGTTTGCGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTGSRRV*GVCEPA
Trigger: AGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCC...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395841.7
CDS-3UTR GCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTGTGATTGTCTGTAGTTaGACTGCCAAACATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPVIVCS*TAKHAG
Trigger: ACCAGCATGTTTGGCAGTGCAACTACAGACAATCAC...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATGTGATTGTCTGTAGTTaGACTGCCAAACATGCTGGT +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNVIVCS*TAKHAG
Trigger: ACCAGCATGTTTGGCAGTGCAACTACAGACAATCAC...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp ATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGGTGATTGTCTGTAGTTaGACTGCCAAACATGCTGGT +
Preference number: 4 (lower is better)
Translates to: IPQLQGCHEQDGTRFHLPVIVCS*TAKHAG
Trigger: ACCAGCATGTTTGGCAGTGCAACTACAGACAATCAC...CGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGCACCTTTCAGGGAGTTaGAAAACCATCATAGGATTT +
Preference number: 4 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRHLSGS*KTIIGF
Trigger: AAATCCTATGATGGTTTTGCAACTCCCTGAAAGGTG...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TTTTGTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTAATCAGGCCCCTCTCTaGAGTTGCCACCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: FCSGIFVPEAESTIRSHSNQAPL*SCHHSH
Trigger: ATGGCTGTGGTGGCAACTGCAGAGAGGGGCCTGATT...ACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp CCCTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTACATGCTGGTCCCACTaGTTCCAAAACCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLVTEKLCNRQWNGETASTCWSH*FQNLRL
Trigger: CAACCTCAGGTTTTGGAACCAGTGGGACCAGCATGT...ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGCTGGGCTTTTGGAATaGTCTGTCCACTGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNAGLLE*SVHCLE
Trigger: TTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGC...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCAGCTGGGCTTTTGGAATaGTCTGTCCACTGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPAGLLE*SVHCLE
Trigger: TTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGC...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTGCGATCTGTATCGCTTaGTTACTGCTGAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQGCHEQDGTRFHLPHKCAICIA*LLLRSH
Trigger: GTGGGACCTCAGCAGTAACCAAGCGATACAGATCGC...ACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGACAACCCAACAAGGCTaGGACCCAAATTCGTACAGA +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALTTQQG*DPNSYR
Trigger: TCTGTACGAATTTGGGTCCCAGCCTTGTTGGGTTGT...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTGCGCTGCAAAATCCCTaGCGGTGCCCGCAATCTAAC +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTALQNP*RCPQSN
Trigger: GTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGC...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTTGCAGGGGACCGGGGTaGGTAAGAGTTCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTCRGPG*VRVQGN
Trigger: ATTGCCCTGAACTCTTACCCACCCCGGTCCCCTGCA...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGGTACTGCCTGTACGGTaGCACCTATATACGTATACA +
Preference number: 4 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPVLPVR*HLYTYT
Trigger: TGTATACGTATATAGGTGCCACCGTACAGGCAGTAC...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR TCA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGAACATCATTAGCCCATaGTCCTGCAATAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRNIISP*SCNKKV
Trigger: AACTTTCTTATTGCAGGATCATGGGCTAATGATGTT...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTAATGTCCTGAGGAGCTaGAGTGTTGGTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSNVLRS*SVGSIR
Trigger: TCTAATGGAACCAACACTTCAGCTCCTCAGGACATT...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACAATGTCCTGAGGAGCTaGAGTGTTGGTTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: RSHSCKGAMNRMERDSIYNVLRS*SVGSIR
Trigger: TCTAATGGAACCAACACTTCAGCTCCTCAGGACATT...GTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAAAATTCGTACAGAGATaGGGCAGAGTGGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGKFVQR*GRVERN
Trigger: GTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTT...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAATTCGTACAGAGATaGGGCAGAGTGGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTEKFVQR*GRVERN
Trigger: GTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTT...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAGTGATTGTCTGTAGTTaGACTGCCAAACATGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGVIVCS*TAKHAG
Trigger: ACCAGCATGTTTGGCAGTGCAACTACAGACAATCAC...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTAGTTTTATCACACGATaGCGTAAACACTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPSFITR*RKHFAP
Trigger: GGGAGCAAAGTGTTTACGGCATCGTGTGATAAAACT...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp TTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTATCAGATCCCACAGTTaGAAGGGTGCCATGAACAGG +
Preference number: 4 (lower is better)
Translates to: LQGCHEQDGTRFHLPHKCIRSHS*KGAMNR
Trigger: CCTGTTCATGGCACCCTTGCAACTGTGGGATCTGAT...ACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATGTTACAGAAAAACTCTaGAACAGGCAGTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNVTEKL*NRQWNG
Trigger: TCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAAC...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCGCTGGGCTTTTGGAATaGTCTGTCCACTGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CKGAMNRMERDSIYRINVAGLLE*SVHCLE
Trigger: TTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGC...GACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp CATGTCCCTTTGACCAGTCGTAGCTGGAAGCGTATGCAAATATGTTTCCATTGTTTGCCACCACAGCCATaGGGTATATCACGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: HVPLTSRSWKRMQICFHCLPPQP*GISRQH
Trigger: GTGCTGACGTGATATACCCCATGGCTGTGGTGGCAA...ACAATGGAAACATATTTGCATACGCTTCCAGCTACGACTGGTCAAAGGGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAATGCTGATGTTTCAGTaGAGATTCTATCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLMLMFQ*RFYPPE
Trigger: TTCAGGAGGATAGAATCTCCACTGAAACATCAGCAT...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp GTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAACAGCAAGCTGAGATaGGCTGATCTAACTGTTCCG +
Preference number: 4 (lower is better)
Translates to: VLASLSQKLNLPSDPTVANSKLR*ADLTVP
Trigger: CGGAACAGTTAGATCAGCCCATCTCAGCTTGCTGTT...TGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTTTGACCAGTCGTAGCTaGAAGCGTATGCAAATATGT +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPLTSRS*KRMQIC
Trigger: ACATATTTGCATACGCTTCCAGCTACGACTGGTCAA...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATAACCATCATAGGATTTaGCGATCGAGTATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNNHHRI*RSSIPK
Trigger: TTTTGGGATACTCGATCGTCAAATCCTATGATGGTT...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGATTCTATCCTCCTaGATTCAGAAGGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPEILSS*IQKVDS
Trigger: AGAATCAACCTTCTGAATTCAGGAGGATAGAATCTC...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCTTTGTCCCAGAAGCTaGATCTACCATCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: LQGCHEQDGTRFHLPHKCLCPRS*IYHQIP
Trigger: TGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAG...ACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGATGTTTCCATTGTGATTaGAACAGCAAGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGCFHCD*NSKLRW
Trigger: CCATCTCAGCTTGCTGTTTCAATCACAATGGAAACA...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTAGTCACTCGGAAATCTaGGCAGCAAGGCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTSHSEI*AARPES
Trigger: GCTTTCTGGCCTTGCTGCTCAGATTTCCGAGTGACT...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAGTTTTATCACACGATaGCGTAAACACTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTESFITR*RKHFAP
Trigger: GGGAGCAAAGTGTTTACGGCATCGTGTGATAAAACT...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp CTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGAGTTTTATCACACGATaGCGTAAACACTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LASLSQKLNLPSDPTVARSFITR*RKHFAP
Trigger: GGGAGCAAAGTGTTTACGGCATCGTGTGATAAAACT...CCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCAGTTACAGAAAAACTCTaGAACAGGCAGTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPVTEKL*NRQWNG
Trigger: TCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAAC...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGGTTACAGAAAAACTCTaGAACAGGCAGTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALVTEKL*NRQWNG
Trigger: TCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAAC...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTGGAGCTTTGATCCAATaGATGGTTTTAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSGALIQ*MVLTGA
Trigger: TGCTCCTGTTAAAACCATCCATTGGATCAAAGCTCC...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGAGCTTTGATCCAATaGATGGTTTTAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNGALIQ*MVLTGA
Trigger: TGCTCCTGTTAAAACCATCCATTGGATCAAAGCTCC...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAACACACAGCTGTAGTTTaGAGCTTTGATCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: GGARNLTSTITSTPLVTEHTAVV*SFDPMD
Trigger: ATCCATTGGATCAAAGCTCCAAACTACAGCTGTGTG...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATATGCTGATGTTTCAGTaGAGATTCTATCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNMLMFQ*RFYPPE
Trigger: TTCAGGAGGATAGAATCTCCACTGAAACATCAGCAT...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGATTGACCAGTCGTAGCTaGAAGCGTATGCAAATATGT +
Preference number: 4 (lower is better)
Translates to: TRKSEQQGQKALGILKMGLTSRS*KRMQIC
Trigger: ACATATTTGCATACGCTTCCAGCTACGACTGGTCAA...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CCCTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTACTACTTCTTATTCCTaGGCTTTAGCTCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PLVTEKLCNRQWNGETASTTSYS*ALALRL
Trigger: CAGCCGAAGAGCTAAAGCCCAGGAATAAGAAGTAGT...ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTAACCATCATAGGATTTaGCGATCGAGTATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSNHHRI*RSSIPK
Trigger: TTTTGGGATACTCGATCGTCAAATCCTATGATGGTT...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGGTGCCATGAACCATCATAGGATTTaGCGATCGAGTATCCCAAAA +
Preference number: 4 (lower is better)
Translates to: FVPEAESTIRSHSCKGAMNHHRI*RSSIPK
Trigger: TTTTGGGATACTCGATCGTCAAATCCTATGATGGTT...CATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTGAGATTCTATCCTCCTaGATTCAGAAGGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSEILSS*IQKVDS
Trigger: AGAATCAACCTTCTGAATTCAGGAGGATAGAATCTC...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGGTGCCATGGAGATTCTATCCTCCTaGATTCAGAAGGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: FVPEAESTIRSHSCKGAMEILSS*IQKVDS
Trigger: AGAATCAACCTTCTGAATTCAGGAGGATAGAATCTC...CATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp TTTTGTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTAAATTCATGTCCCTTTaGCCAGTCGTAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FCSGIFVPEAESTIRSHSKFMSL*PVVAGS
Trigger: GCTTCCAGCTACGACTGGTCAAAGGGACATGAATTT...ACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTGTTTTCTCCAGGGGTTaGAATCCATGTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTVFSRG*NPCPWL
Trigger: CAGCCATGGACATGGATTTCAACCCCTGGAGAAAAC...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTTCAGCTGCTGAACAATaGCATCGTTTTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTSAAEQ*HRFLQG
Trigger: CCCCTGGAGAAAACGATGTCATTGTTCAGCAGCTGA...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCAGTTATCTTTGGCGCTaGTGTTTCAGTGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: CKGAMNRMERDSIYRINVSYLWR*CFSGDS
Trigger: AGAATCTCCACTGAAACATCAGCGCCAAAGATAACT...GACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp TTTGTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTAGGAGCATCATGCTGTaGGATCTGTATCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FVLASLSQKLNLPSDPTVRSIML*DLYRLV
Trigger: AACCAAGCGATACAGATCGCACAGCATGATGCTCCT...AACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTCACCTTTCAGGGAGTTaGAAAACCATCATAGGATTT +
Preference number: 4 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSHLSGS*KTIIGF
Trigger: AAATCCTATGATGGTTTTGCAACTCCCTGAAAGGTG...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGGTAGCTGGAAGCGTATaGAAATATGTTTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALVAGSV*KYVSIV
Trigger: CACAATGGAAACATATTTGCATACGCTTCCAGCTAC...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp CAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCCTGGAGCTTTGATCCAATaGATGGTTTTAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QGCHEQDGTRFHLPHKCPGALIQ*MVLTGA
Trigger: TGCTCCTGTTAAAACCATCCATTGGATCAAAGCTCC...AGGACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp TGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCTTGACCAGTCGTAGCTaGAAGCGTATGCAAATATGT +
Preference number: 4 (lower is better)
Translates to: CKGAMNRMERDSIYRINVLTSRS*KRMQIC
Trigger: ACATATTTGCATACGCTTCCAGCTACGACTGGTCAA...GACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp TTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTGCGCTGATGTTTCAGTaGAGATTCTATCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LQGCHEQDGTRFHLPHKCALMFQ*RFYPPE
Trigger: TTCAGGAGGATAGAATCTCCACTGAAACATCAGCGC...ACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTCAAGCTGAGATGGGCTaGTCTAACTGTTCCGAAGTT +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTQAEMG*SNCSEV
Trigger: AACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTG...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTAAATTCATGTCCCTTTaGCCAGTCGTAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTKFMSL*PVVAGS
Trigger: GCTTCCAGCTACGACTGGTCAAAGGGACATGAATTT...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTGCTTGGGTTCTAACTTaGAAGTCACGCAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTAWVLT*KSRKCH
Trigger: GTGACACTTGCGTGACTTTCAAGTTAGAACCCAAGC...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR TCA 90 bp TTTTGTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGTTTCCATTGTGATTaGAACAGCAAGCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: FCSGIFVPEAESTIRSHSCFHCD*NSKLRW
Trigger: CCATCTCAGCTTGCTGTTTCAATCACAATGGAAACA...ACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp TTTTGTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTCACACAGCTGTAGTTTaGAGCTTTGATCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: FCSGIFVPEAESTIRSHSHTAVV*SFDPMD
Trigger: ATCCATTGGATCAAAGCTCCAAACTACAGCTGTGTG...ACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATTATACAATAAATACTTaGCGGGCTAAGACAGAAACA +
Preference number: 4 (lower is better)
Translates to: LESHASVTHLGLRRLPTNYTINT*RAKTET
Trigger: TGTTTCTGTCTTAGCCCGCCAAGTATTTATTGTATA...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR TCA 90 bp TTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTAACATCATTAGCCCATaGTCCTGCAATAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LQGCHEQDGTRFHLPHKCNIISP*SCNKKV
Trigger: AACTTTCTTATTGCAGGATCATGGGCTAATGATGTT...ACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTGGAGCTTTGATCCAATaGATGGTTTTAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTGALIQ*MVLTGA
Trigger: TGCTCCTGTTAAAACCATCCATTGGATCAAAGCTCC...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CCA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTCACACAGCTGTAGTTTaGAGCTTTGATCCAATGGAT +
Preference number: 4 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTHTAVV*SFDPMD
Trigger: ATCCATTGGATCAAAGCTCCAAACTACAGCTGTGTG...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR GCA 90 bp AGCAAGCTGAGATGGGCTGATCTAACTGTTCCGAAGTTTTTAGTTTTGTTCTGGCACCTTTCAGGGAGTTaGAAAACCATCATAGGATTT +
Preference number: 4 (lower is better)
Translates to: SKLRWADLTVPKFLVLFWHLSGS*KTIIGF
Trigger: AAATCCTATGATGGTTTTGCAACTCCCTGAAAGGTG...CCAGAACAAAACTAAAAACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR GCA 90 bp AGCAAGCTGAGATGGGCTGATCTAACTGTTCCGAAGTTTTTAGTTTTGTTCTGGGTAGCTGGAAGCGTATaGAAATATGTTTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: SKLRWADLTVPKFLVLFWVAGSV*KYVSIV
Trigger: CACAATGGAAACATATTTGCATACGCTTCCAGCTAC...CCAGAACAAAACTAAAAACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS TCA 90 bp GGGGTCTCGCCCCGGCGGAAAGCGGCGGCCGGGAGCAGAAGGGTCTaGGGAGTTTGCGAACCTGCTCTGGCGCGAAGGACGAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GVSPRRKAAAGSRRV*GVCEPALARRTRAR
Trigger: CCTGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCCGGCCGCCGCTTTCCGCCGGGGCGAGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS GCA 90 bp CTAGGCAGACACCCCTCAGGAGGTCACCCGAAGCTTCTGCGCTTCTaGCTCCCCAGCTGGAGGAGGGATGCAGGCTCTGCCGCACCCGTC +
Preference number: 5 (lower is better)
Translates to: LGRHPSGGHPKLLRF*LPSWRRDAGSAAPV
Trigger: GACGGGTGCGGCAGAGCCTGCATCCCTCCTCCAGCTGGGGAGGCAGAAGCGCAGAAGCTTCGGGTGACCTCCTGAGGGGTGTCTGCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp CGGCGGCCGGGAGCAGAAGGGTCTGAGGAGTTTGCGAACCTGCTCTaGCGCGAAGGACGAGGGCCAGGAGCGCGGACAGAAATCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RRPGAEGSEEFANLL*REGRGPGARTEIPG
Trigger: TCCTGGGATTTCTGTCCGCGCTCCTGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCCGGCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS GCA 90 bp GAAAGCGGCGGCCGGGAGCAGAAGGGTCTGAGGAGTTTGCGAACCTaGTCTGGCGCGAAGGACGAGGGCCAGGAGCGCGGACAGAAATCC +
Preference number: 5 (lower is better)
Translates to: ESGGREQKGLRSLRT*SGAKDEGQERGQKS
Trigger: GGATTTCTGTCCGCGCTCCTGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCCGGCCGCCGCTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS CCA 90 bp CCCTCAGGAGGTCACCCGAAGCTTCTGCGCTTCTGCCTCCCCAGCTaGAGGAGGGATGCAGGCTCTGCCGCACCCGTCTCACAGGGTAAC +
Preference number: 5 (lower is better)
Translates to: PSGGHPKLLRFCLPS*RRDAGSAAPVSQGN
Trigger: GTTACCCTGTGAGACGGGTGCGGCAGAGCCTGCATCCCTCCTCCAGCTGGGGAGGCAGAAGCGCAGAAGCTTCGGGTGACCTCCTGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS TCA 90 bp GGAGGGATGCAGGCTCTGCCGCACCCGTCTCACAGGGTAACAGGGTaGAGGGGACGGTGGGTGCAGTGGCCATGCTACAGACAAGCAACA +
Preference number: 5 (lower is better)
Translates to: GGMQALPHPSHRVTG*RGRWVQWPCYRQAT
Trigger: TGTTGCTTGTCTGTAGCATGGCCACTGCACCCACCGTCCCCTTCACCCTGTTACCCTGTGAGACGGGTGCGGCAGAGCCTGCATCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS-3UTR CAA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCCCAAACAGGCTCATTTaGAACCTGGGGGTCTCGCCC +
Preference number: 5 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSPNRLI*NLGVSP
Trigger: GGGCGAGACCCCCAGGTTCAAAATGAGCCTGTTTGG...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395841.7
CDS GCA 90 bp GAGTCACAACTCAGGCCTAGGCCTTCTGAACCCAGAGCCTGGCTCTaGTGCCTTGGAGCACCCAGAGCAGGCCCGGGAGTTCTCACCTTT +
Preference number: 5 (lower is better)
Translates to: ESQLRPRPSEPRAWL*CLGAPRAGPGVLTF
Trigger: AAAGGTGAGAACTCCCGGGCCTGCTCTGGGTGCTCCAAGGCAGCAGAGCCAGGCTCTGGGTTCAGAAGGCCTAGGCCTGAGTTGTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527947.5
CDS GCA 90 bp TACTGTGCGGCACACCAGGAACTGCACAATGCCAGGGGTGTCACTTaGACCAAGAGCCACATGCACTGGCCCTGTGCAAAGGCCGATGGC +
Preference number: 5 (lower is better)
Translates to: YCAAHQELHNARGVT*TKSHMHWPCAKADG
Trigger: GCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAGTTCCTGGTGTGCCGCACAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp CACTTGCACCAAGAGCCACATGCACTGGCCCTGTGCAAAGGCCGATaGCAATCAGTTCTCAACAACGGAGAGGCCAGGGCGCTAGCACCG +
Preference number: 5 (lower is better)
Translates to: HLHQEPHALALCKGR*QSVLNNGEARALAP
Trigger: CGGTGCTAGCGCCCTGGCCTCTCCGTTGTTGAGAACTGATTGCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS-3UTR CAA 90 bp CCCACGCTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGCATCTGCTGGGCTTTaGGAATGGTCTGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: PTLMLGRTHVPEVTGWARASAGL*EWSVHC
Trigger: ACAGTGGACAGACCATTCCAAAAGCCCAGCAGATGC...CCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTGATGCCGTAAACACTTaGCTCCCATCGTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: SQRLPFRAAEVSAAGDSLDAVNT*LPSSLQ
Trigger: CTGGAGTGACGATGGGAGCAAAGTGTTTACGGCATC...AAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTCCCTTTCCCCTAAGGTaGCCGCATTTCCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCPFPLR*PHFPEG
Trigger: ACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGG...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS TCA 90 bp TTACAGGGAGGGGACGGTGACCTGCCCAAGGACACACGTGAGTCCTaGGAAGAGTCACAACTCAGGCCTAGGCCTTCTGAACCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LQGGDGDLPKDTRES*EESQLRPRPSEPRA
Trigger: GGCTCTGGGTTCAGAAGGCCTAGGCCTGAGTTGTGACTCTTCTCAGGACTCACGTGTGTCCTTGGGCAGGTCACCGTCCCCTCCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527947.5
CDS GCA 90 bp TGCCAGGGGTGTCACTTGCACCAAGAGCCACATGCACTGGCCCTGTaGAAAGGCCGATGGCAATCAGTTCTCAACAACGGAGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CQGCHLHQEPHALAL*KGRWQSVLNNGEAR
Trigger: CCTGGCCTCTCCGTTGTTGAGAACTGATTGCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 90 bp TCATCAGCACAGGGTCTACTGTGCGGCACACCAGGAACTGCACAATaGCAGGGGTGTCACTTGCACCAAGAGCCACATGCACTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SSAQGLLCGTPGTAQ*QGCHLHQEPHALAL
Trigger: CAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAGTTCCTGGTGTGCCGCACAGTAGACCCTGTGCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 90 bp TTCCAGTCGTGGCAACCTGGCCAAAGCTTGGAGGGCCATCCACCCTaGCTAAGCTGGTCATCTGAGCTTCCGTGTGAGTTCAGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: FQSWQPGQSLEGHPP*LSWSSELPCEFRGS
Trigger: GCTTCCCCTGAACTCACACGGAAGCTCAGATGACCAGCTTAGGCAGGGTGGATGGCCCTCCAAGCTTTGGCCAGGTTGCCACGACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp GTACAATGCCTGGCCCAGGGCGGCTGGTGTTTAATACTACTTGCCTaGAGAAGTACTGCCTGTACGGTGGCACCTCGCTTCCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: VQCLAQGGWCLILLA*RSTACTVAPRFQGP
Trigger: TGGGCCCTGGAAGCGAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAGGCATTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411894.5
CDS-3UTR CAA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGCTGAGGTCCCACATTTaGGCAGTTTTATCACACGAT +
Preference number: 5 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWLRSHI*AVLSHD
Trigger: ATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAG...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS GCA 90 bp CACAGTACAATGCCTGGCCCAGGGCGGCTGGTGTTTAATACTACTTaGCTGGAGAAGTACTGCCTGTACGGTGGCACCTCGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: HSTMPGPGRLVFNTT*LEKYCLYGGTSLPG
Trigger: CCCTGGAAGCGAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAGGCATTGTACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411894.5
CDS GCA 90 bp TGGCTGGTCATCAGCACAGGGTCTACTGTGCGGCACACCAGGAACTaGACAATGCCAGGGGTGTCACTTGCACCAAGAGCCACATGCACT +
Preference number: 5 (lower is better)
Translates to: WLVISTGSTVRHTRN*TMPGVSLAPRATCT
Trigger: AGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAGTTCCTGGTGTGCCGCACAGTAGACCCTGTGCTGATGACCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS-3UTR CAA 90 bp CGCGCAGCAGAAGTGAGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCAGGCTTGGGTTCTAACTaGAAAGTCACGCAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: RAAEVSAAGDSLSPKVAAGLGSN*KVTQVS
Trigger: TGACACTTGCGTGACTTTCAAGTTAGAACCCAAGCC...TGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCTCACTTCTGCTGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCCCAAACAGGCTCATTTaGAACCTGGAGAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSPNRLI*NLEKYC
Trigger: GCAGTACTTCTCCAGGTTCAAAATGAGCCTGTTTGG...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS GCA 90 bp GATGACAGAAAAGGCCATGGCTGGTCATCAGCACAGGGTCTACTGTaGGGCACACCAGGAACTGCACAATGCCAGGGGTGTCACTTGCAC +
Preference number: 5 (lower is better)
Translates to: DDRKGHGWSSAQGLL*GTPGTAQCQGCHLH
Trigger: GTGCAAGTGACACCCCTGGCATTGTGCAGTTCCTGGTGTGCCGCACAGTAGACCCTGTGCTGATGACCAGCCATGGCCTTTTCTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp CTGCACAATGCCAGGGGTGTCACTTGCACCAAGAGCCACATGCACTaGCCCTGTGCAAAGGCCGATGGCAATCAGTTCTCAACAACGGAG +
Preference number: 5 (lower is better)
Translates to: LHNARGVTCTKSHMH*PCAKADGNQFSTTE
Trigger: CTCCGTTGTTGAGAACTGATTGCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS TCA 90 bp GTAAGGGGGAGGGACAGAGGCGACACACACTGCATTAACGCAATGTaGCCCTTCCCAGAGGCTCAGTTCCCCCACAAGAGAAACGATGGA +
Preference number: 5 (lower is better)
Translates to: VRGRDRGDTHCINAM*PFPEAQFPHKRNDG
Trigger: TCCATCGTTTCTCTTGTGGGGGAACTGAGCCTCTGGGAAGGGTCACATTGCGTTAATGCAGTGTGTGTCGCCTCTGTCCCTCCCCCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395840.6
ENST00000452119.1
CDS-3UTR CAA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGTAGGCTTGTTCTGTTaGTCTTTAAAAATAGCCACA +
Preference number: 5 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWVGLFC*SLKIAT
Trigger: TGTGGCTATTTTTAAAGACAAACAGAACAAGCCTAC...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCGCAGCTGGGCAAAACCAGTAGGCTaGTTCTGTTTGTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: PPGLTEAAVPRSRSERSWAKPVG*FCLSLK
Trigger: TTTTAAAGACAAACAGAACAAGCCTACTGGTTTTGC...CCAGCTGCGCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp AACTCTGCCCACCAGGGCTCACAGAGGCTGCCGTTCCGCGCAGCAGAAGTGAGCTTTGTTCTGGCATCTTaGTCCCAGAAGCTGAATCTA +
Preference number: 5 (lower is better)
Translates to: NSAHQGSQRLPFRAAEVSFVLAS*SQKLNL
Trigger: TAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAA...GCTCACTTCTGCTGCGCGGAACGGCAGCCTCTGTGAGCCCTGGTGGGCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TACCATCAGATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCAAGGGTCTGAGGAGTTaGCGAACCTGCTCTGGCGCG +
Preference number: 5 (lower is better)
Translates to: YHQIPQLQGCHEQDGTRFKGLRS*RTCSGA
Trigger: CGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTT...GAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCTGATGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS GCA 90 bp AGGAACTGCACAATGCCAGGGGTGTCACTTGCACCAAGAGCCACATaGACTGGCCCTGTGCAAAGGCCGATGGCAATCAGTTCTCAACAA +
Preference number: 5 (lower is better)
Translates to: RNCTMPGVSLAPRAT*TGPVQRPMAISSQQ
Trigger: TTGTTGAGAACTGATTGCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp CCAGCAGACATCAAGCACAGGCCCAGTGTGCATCTGCTGGGCTTTTaGAATGGTCTGTCCACTGTCTTGAACTTCCCAGCAGCGAACATC +
Preference number: 5 (lower is better)
Translates to: PADIKHRPSVHLLGF*NGLSTVLNFPAANI
Trigger: GATGTTCGCTGCTGGGAAGTTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGCAGATGCACACTGGGCCTGTGCTTGATGTCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS-3UTR CAA 90 bp CTGATGCTGGGCAGGACGCATGTTCCTGAGGTTACGGGGTGGGCAAGGGGAGAAAAAGCACTGGGGATTTaGAAGATGGGAATGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LMLGRTHVPEVTGWARGEKALGI*KMGMRE
Trigger: TTCCCTCATTCCCATCTTCAAAATCCCCAGTGCTTT...TTCTCCCCTTGCCCACCCCGTAACCTCAGGAACATGCGTCCTGCCCAGCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTAAAGCACTGGGGATTTaGAAGATGGGAATGAGGGAA +
Preference number: 5 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCKALGI*KMGMRE
Trigger: TTCCCTCATTCCCATCTTCAAAATCCCCAGTGCTTT...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAGGGTCTGAGGAGTTaGCGAACCTGCTCTGGCGCG +
Preference number: 5 (lower is better)
Translates to: GGARNLTSTITSTPLVTEKGLRS*RTCSGA
Trigger: CGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTT...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395841.7
CDS TCA 90 bp CAAGACGAAGGGAGAAGCAGCCTCTGGCATCGTGACAGCTGCTGGTaGTGCACGTTTCCTAAGTACGAAGGAAAACGGCCTCCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: QDEGRSSLWHRDSCW*CTFPKYEGKRPPLS
Trigger: TGAAAGAGGAGGCCGTTTTCCTTCGTACTTAGGAAACGTGCATCACCAGCAGCTGTCACGATGCCAGAGGCTGCTTCTCCCTTCGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp ACCCAACAAGGCTGGGACCCAAATTCGTACAGAGATGAGGCAGAGTaGAGAGAAACAACTCTGGCTGAGCCAGAGTCTCCAGCCACTACT +
Preference number: 5 (lower is better)
Translates to: TQQGWDPNSYRDEAE*RETTLAEPESPATT
Trigger: AGTAGTGGCTGGAGACTCTGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGGGTCCCAGCCTTGTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000462438.1
CDS-3UTR CAA 90 bp AGCGCAGCTGGGGACTCCCTTTCCCCTAAGGTTGCCGCATTTCCCAGAGGGTGTTTCCAAAACCTGAGGTaGTTCCAAACAGGCTCATTT +
Preference number: 5 (lower is better)
Translates to: SAAGDSLSPKVAAFPRGCFQNLR*FQTGSF
Trigger: AAATGAGCCTGTTTGGAACAACCTCAGGTTTTGGAA...ACACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGGAGTCCCCAGCTGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCCATCAGATCCCACAGTaGCAAGGGTGCCATGAACAG +
Preference number: 5 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGHQIPQ*QGCHEQ
Trigger: CTGTTCATGGCACCCTTGCAACTGTGGGATCTGATG...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCACCCTTTCCCCTAAGGTaGCCGCATTTCCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPPFPLR*PHFPEG
Trigger: ACCCTCTGGGAAATGCGGCAACCTTAGGGGAAAGGG...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCAGCAAGTGTCACCCACTaGGGCCTTAGGAGGTTACCC +
Preference number: 5 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPASVTH*GLRRLP
Trigger: GGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGC...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGCCAAACAGGCTCATTTaGAACCTGGGGGTCTCGCCC +
Preference number: 5 (lower is better)
Translates to: LASLSQKLNLPSDPTVARPNRLI*NLGVSP
Trigger: GGGCGAGACCCCCAGGTTCAAAATGAGCCTGTTTGG...CCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS CCA 90 bp TCTCTATTCTACAGAAGAACCCAGAAATTCCACTACCCAGCCTCCTaGGCAGAAAAGCCGACCACCCCGAGGAGAAGCCAACTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: SLFYRRTQKFHYPAS*AEKPTTPRRSQLWS
Trigger: ACTCCAAAGTTGGCTTCTCCTCGGGGTGGTCGGCTTTTCTGCCCAGGAGGCTGGGTAGTGGAATTTCTGGGTTCTTCTGTAGAATAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS-3UTR CAA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTGGTCTGTCCACTGTCTaGAACTTCCCAGCAGCGAAC +
Preference number: 5 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSGLSTV*NFPAAN
Trigger: GTTCGCTGCTGGGAAGTTCAAGACAGTGGACAGACC...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATGCATCTGCTGGGCTTTaGGAATGGTCTGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNASAGL*EWSVHC
Trigger: ACAGTGGACAGACCATTCCAAAAGCCCAGCAGATGC...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTGATGCCGTAAACACTTaGCTCCCATCGTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPDAVNT*LPSSLQ
Trigger: CTGGAGTGACGATGGGAGCAAAGTGTTTACGGCATC...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTTGCGATCTGTATCGCTaGGTTACTGCTGAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPCDLYR*VTAEVP
Trigger: TGGGACCTCAGCAGTAACCAAGCGATACAGATCGCA...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGTGCGATCTGTATCGCTaGGTTACTGCTGAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPCDLYR*VTAEVP
Trigger: TGGGACCTCAGCAGTAACCAAGCGATACAGATCGCA...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TACCATCAGATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCTGCGATCTGTATCGCTaGGTTACTGCTGAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: YHQIPQLQGCHEQDGTRFCDLYR*VTAEVP
Trigger: TGGGACCTCAGCAGTAACCAAGCGATACAGATCGCA...GAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCTGATGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp CCCTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTGCAAGTGTCACCCACTaGGGCCTTAGGAGGTTACCC +
Preference number: 5 (lower is better)
Translates to: PLVTEKLCNRQWNGETASASVTH*GLRRLP
Trigger: GGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGC...ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS GCA 90 bp CACAGTACAATGCCTGGCCCAGGGCGGCTGGTGTTTAATACTACTTaGCTGGAGAAGTACTGCCTGTACGGTGGCACCTATATACGTATA +
Preference number: 5 (lower is better)
Translates to: HSTMPGPGRLVFNTT*LEKYCLYGGTYIRI
Trigger: TATACGTATATAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAGGCATTGTACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452119.1
CDS-3UTR CAA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGATGCCGTAAACACTTaGCTCCCATCGTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: LESHASVTHLGLRRLPTNDAVNT*LPSSLQ
Trigger: CTGGAGTGACGATGGGAGCAAAGTGTTTACGGCATC...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGATGCGATCTGTATCGCTaGGTTACTGCTGAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: TRKSEQQGQKALGILKMGCDLYR*VTAEVP
Trigger: TGGGACCTCAGCAGTAACCAAGCGATACAGATCGCA...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATCATCAGATCCCACAGTaGCAAGGGTGCCATGAACAG +
Preference number: 5 (lower is better)
Translates to: LESHASVTHLGLRRLPTNHQIPQ*QGCHEQ
Trigger: CTGTTCATGGCACCCTTGCAACTGTGGGATCTGATG...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGACATCAGATCCCACAGTaGCAAGGGTGCCATGAACAG +
Preference number: 5 (lower is better)
Translates to: TRKSEQQGQKALGILKMGHQIPQ*QGCHEQ
Trigger: CTGTTCATGGCACCCTTGCAACTGTGGGATCTGATG...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATCGTTTTCTCCAGGGGTaGAAATCCATGTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNRFLQG*KSMSMA
Trigger: AGCCATGGACATGGATTTCAACCCCTGGAGAAAACG...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS CCA 90 bp ACCCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTaGCTGAGCCAGAGTCTCCAGCCACTACTTCTTATTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: TQIRTEMRQSGEKQL*LSQSLQPLLLIPGL
Trigger: AAGCCCAGGAATAAGAAGTAGTGGCTGGAGACTCTGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000462438.1
CDS CCA 90 bp GTACAATGCCTGGCCCAGGGCGGCTGGTGTTTAATACTACTTGCCTaGAGAAGTACTGCCTGTACGGTGGCACCTATATACGTATACAAT +
Preference number: 5 (lower is better)
Translates to: VQCLAQGGWCLILLA*RSTACTVAPIYVYN
Trigger: ATTGTATACGTATATAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAGGCATTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452119.1
CDS-3UTR CAA 90 bp TCCCAGAGGGTGTCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGTTCCAAAACCTGAGGTaGTTCCAAACAGGCTCATTT +
Preference number: 5 (lower is better)
Translates to: SQRVSEISTQNPTLMLGRFQNLR*FQTGSF
Trigger: AAATGAGCCTGTTTGGAACAACCTCAGGTTTTGGAA...CCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGACACCCTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp GTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAGCATCTGCTGGGCTTTaGGAATGGTCTGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: VLASLSQKLNLPSDPTVAASAGL*EWSVHC
Trigger: ACAGTGGACAGACCATTCCAAAAGCCCAGCAGATGC...TGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp GTTCTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAGATGCCGTAAACACTTaGCTCCCATCGTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: VLASLSQKLNLPSDPTVADAVNT*LPSSLQ
Trigger: CTGGAGTGACGATGGGAGCAAAGTGTTTACGGCATC...TGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp AAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCCTGCATCAGATCCCACAGTaGCAAGGGTGCCATGAACAG +
Preference number: 5 (lower is better)
Translates to: KGAMNRMERDSIYRINVLHQIPQ*QGCHEQ
Trigger: CTGTTCATGGCACCCTTGCAACTGTGGGATCTGATG...CAGGACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATCGTTTTCTCCAGGGGTaGAAATCCATGTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: LESHASVTHLGLRRLPTNRFLQG*KSMSMA
Trigger: AGCCATGGACATGGATTTCAACCCCTGGAGAAAACG...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCACGTTTTCTCCAGGGGTaGAAATCCATGTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPRFLQG*KSMSMA
Trigger: AGCCATGGACATGGATTTCAACCCCTGGAGAAAACG...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TCTCTAACACGTACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACACCTTTCAGGGAGTaGCAAAACCATCATAGGATT +
Preference number: 5 (lower is better)
Translates to: SLTRTLKRCKIPGGARNLTPFRE*QNHHRI
Trigger: AATCCTATGATGGTTTTGCAACTCCCTGAAAGGTGT...TAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTACGTGTTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTAAAATTCATGTCCCTTaGACCAGTCGTAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPKIHVP*TSRSWK
Trigger: CTTCCAGCTACGACTGGTCAAAGGGACATGAATTTT...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TACCATCAGATCCCACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCAAAATTCATGTCCCTTaGACCAGTCGTAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: YHQIPQLQGCHEQDGTRFKIHVP*TSRSWK
Trigger: CTTCCAGCTACGACTGGTCAAAGGGACATGAATTTT...GAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCTGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTGCAAGTGTCACCCACTaGGGCCTTAGGAGGTTACCC +
Preference number: 5 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTASVTH*GLRRLP
Trigger: GGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGC...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CTTGAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCTTGGGTTCTAACTaGAAAGTCACGCAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LESHASVTHLGLRRLPTNGLGSN*KVTQVS
Trigger: TGACACTTGCGTGACTTTCAAGTTAGAACCCAAGCC...ATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS GCA 90 bp TTGGTTACTGCTGAGGTCCCACATTTTGGCAGTTTTATCACACGATaGCGTAAACACTTTGCTCCCATCGTCACTCCAGCAGACATCAAG +
Preference number: 5 (lower is better)
Translates to: LVTAEVPHFGSFITR*RKHFAPIVTPADIK
Trigger: CTTGATGTCTGCTGGAGTGACGATGGGAGCAAAGTGTTTACGGCATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAGCAGTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS GCA 90 bp TCCCATTCCACAGGCTGCCTTTTCACTCTTTTCCATGGTTCCCTCTaGTGTGCAAGAGCTGTTAGTTTAACACAGTTCCACTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: SHSTGCLFTLFHGSL*CARAVSLTQFHLAI
Trigger: AATGGCCAAGTGGAACTGTGTTAAACTAACAGCTCTTGCACAGCAGAGGGAACCATGGAAAAGAGTGAAAAGGCAGCCTGTGGAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS-3UTR CAA 90 bp ACGGGGCTCACAGACGCTTTTCCAATATTCTCTAACACGTACACTGAAGCGCTGCTGAGGTCCCACATTTaGGCAGTTTTATCACACGAT +
Preference number: 5 (lower is better)
Translates to: TGLTDAFPIFSNTYTEALLRSHI*AVLSHD
Trigger: ATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAG...CAGCGCTTCAGTGTACGTGTTAGAGAATATTGGAAAAGCGTCTGTGAGCCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CTGGCATCTTTGTCCCAGAAGCTGAATCTACCATCAGATCCCACAGTTGCAAGGCTGAGGTCCCACATTTaGGCAGTTTTATCACACGAT +
Preference number: 5 (lower is better)
Translates to: LASLSQKLNLPSDPTVARLRSHI*AVLSHD
Trigger: ATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAG...CCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp AGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTCGCCGTTTGTTCTGGCATCTTaGTCCCAGAAGCTGAATCTA +
Preference number: 5 (lower is better)
Translates to: SYRKTLQQAVEWRDGKSPFVLAS*SQKLNL
Trigger: TAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAA...CGGCGACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCAAAAATTCATGTCCCTTaGACCAGTCGTAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPKIHVP*TSRSWK
Trigger: CTTCCAGCTACGACTGGTCAAAGGGACATGAATTTT...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAAAAATTCATGTCCCTTaGACCAGTCGTAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TRKSEQQGQKALGILKMGKIHVP*TSRSWK
Trigger: CTTCCAGCTACGACTGGTCAAAGGGACATGAATTTT...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CCCTTAGTTACAGAAAAACTCTGCAACAGGCAGTGGAATGGAGAGACGGCAAGTGGCTTGGGTTCTAACTaGAAAGTCACGCAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: PLVTEKLCNRQWNGETASGLGSN*KVTQVS
Trigger: TGACACTTGCGTGACTTTCAAGTTAGAACCCAAGCC...ACTTGCCGTCTCTCCATTCCACTGCCTGTTGCAGAGTTTTTCTGTAACTAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS CCA 90 bp ACAACTCTGGCTGAGCCAGAGTCTCCAGCCACTACTTCTTATTCCTaGGCTTTAGCTCTTCGGCTGCATTACGCAGGAAAATGTAATTTT +
Preference number: 5 (lower is better)
Translates to: TTLAEPESPATTSYS*ALALRLHYAGKCNF
Trigger: AAAATTACATTTTCCTGCGTAATGCAGCCGAAGAGCTAAAGCCCAGGAATAAGAAGTAGTGGCTGGAGACTCTGGCTCAGCCAGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000462438.1
CDS-3UTR CAA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTTTCCAAAACCTGAGGTaGTTCCAAACAGGCTCATTT +
Preference number: 5 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSFQNLR*FQTGSF
Trigger: AAATGAGCCTGTTTGGAACAACCTCAGGTTTTGGAA...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATATTCCAAAACCTGAGGTaGTTCCAAACAGGCTCATTT +
Preference number: 5 (lower is better)
Translates to: HSCKGAMNRMERDSIYRIFQNLR*FQTGSF
Trigger: AAATGAGCCTGTTTGGAACAACCTCAGGTTTTGGAA...TATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp CCAAATTCGTACAGAGATGAGGCAGAGTGGAGAGAAACAACTCTGGCTGAGCCAACACCTTTCAGGGAGTaGCAAAACCATCATAGGATT +
Preference number: 5 (lower is better)
Translates to: PNSYRDEAEWRETTLAEPTPFRE*QNHHRI
Trigger: AATCCTATGATGGTTTTGCAACTCCCTGAAAGGTGT...TGGCTCAGCCAGAGTTGTTTCTCTCCACTCTGCCTCATCTCTGTACGAATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCGCAAAACCAGTAGGCTaGTTCTGTTTGTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGAKPVG*FCLSLK
Trigger: TTTTAAAGACAAACAGAACAAGCCTACTGGTTTTGC...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp CACAGTTGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATATTTGTTCTGGCATCTTaGTCCCAGAAGCTGAATCTA +
Preference number: 5 (lower is better)
Translates to: HSCKGAMNRMERDSIYRIFVLAS*SQKLNL
Trigger: TAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAA...TATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp GAAAGTCACGCAAGTGTCACCCACTTGGGCCTTAGGAGGTTACCCACAAATGGCCAGCTGAATTTCATTTaGAATACTTACCAACCAGGA +
Preference number: 5 (lower is better)
Translates to: ESHASVTHLGLRRLPTNGQLNFI*NTYQPG
Trigger: TCCTGGTTGGTAAGTATTCAAAATGAAATTCAGCTG...GCCATTTGTGGGTAACCTCCTAAGGCCCAAGTGGGTGACACTTGCGTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCAAGGTGAAGTTATCTTaGGCGCTGATGTTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: CKGAMNRMERDSIYRINVKVKLS*ALMFQW
Trigger: CCACTGAAACATCAGCGCCAAAGATAACTTCACCTT...GACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS CCA 90 bp CCCCTGATGACCGCCATTCCACCCTTTACTTCTGTGAGTCTATGCTaGATATCACATTTAAGTGGAACCATGCAGTTTCTTTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: PLMTAIPPFTSVSLC*ISHLSGTMQFLSVS
Trigger: AGACACAGAAAGAAACTGCATGGTTCCACTTAAATGTGATATCCAGCATAGACTCACAGAAGTAAAGGGTGGAATGGCGGTCATCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS-3UTR CAA 90 bp TGCAAGGGTGCCATGAACAGGATGGAACGCGATTCCATTTACCGCATAAATGTCACACCTTTCAGGGAGTaGCAAAACCATCATAGGATT +
Preference number: 5 (lower is better)
Translates to: CKGAMNRMERDSIYRINVTPFRE*QNHHRI
Trigger: AATCCTATGATGGTTTTGCAACTCCCTGAAAGGTGT...GACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTTCATGGCACCCTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS-3UTR CAA 90 bp TCTGAAATCTCAACTCAAAACCCCACGCTGATGCTGGGCAGGACGCATGTTCCTGTAGGCTTGTTCTGTTaGTCTTTAAAAATAGCCACA +
Preference number: 5 (lower is better)
Translates to: SEISTQNPTLMLGRTHVPVGLFC*SLKIAT
Trigger: TGTGGCTATTTTTAAAGACAAACAGAACAAGCCTAC...AGGAACATGCGTCCTGCCCAGCATCAGCGTGGGGTTTTGAGTTGAGATTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp TACACTGAAGCGCTGCAAAATCCCTGGCGGTGCCCGCAATCTAACGTCTACAATCAGCTGAATTTCATTTaGAATACTTACCAACCAGGA +
Preference number: 5 (lower is better)
Translates to: YTEALQNPWRCPQSNVYNQLNFI*NTYQPG
Trigger: TCCTGGTTGGTAAGTATTCAAAATGAAATTCAGCTG...ATTGTAGACGTTAGATTGCGGGCACCGCCAGGGATTTTGCAGCGCTTCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS TCA 90 bp GAAGTTATCTTTGGCGCTGATGTTTCAGTGGAGATTCTATCCTCCTaGATTCAGAAGGTTGATTCTCTAGCTGATAGACAATCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: EVIFGADVSVEILSS*IQKVDSLADRQSGP
Trigger: GGGGCCTGATTGTCTATCAGCTAGAGAATCAACCTTCTGAATTCAGGAGGATAGAATCTCCACTGAAACATCAGCGCCAAAGATAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS GCA 90 bp AAGTGGAACCATGCAGTTTCTTTCTGTGTCTGGCTTATTTCATTTTaGATAATCTCCTTCATGGTCACCCACGTTGTCACGAATGGCAGG +
Preference number: 5 (lower is better)
Translates to: KWNHAVSFCVWLISF*IISFMVTHVVTNGR
Trigger: CCTGCCATTCGTGACAACGTGGGTGACCATGAAGGAGATTATGCAAAATGAAATAAGCCAGACACAGAAAGAAACTGCATGGTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp TCCAAACAGGCTCATTTTGAACCTGGAGAAGTACTGCCTGTACGGTaGCACCTATATACGTATACAATAAATACTTGGCGGGCTAAGACA +
Preference number: 5 (lower is better)
Translates to: SKQAHFEPGEVLPVR*HLYTYTINTWRAKT
Trigger: TGTCTTAGCCCGCCAAGTATTTATTGTATACGTATATAGGTGCCACCGTACAGGCAGTACTTCTCCAGGTTCAAAATGAGCCTGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS-3UTR CAA 90 bp GGCGGTGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAGTAGGCTTGTTCTGTTaGTCTTTAAAAATAGCCACA +
Preference number: 5 (lower is better)
Translates to: GGARNLTSTITSTPLVTEVGLFC*SLKIAT
Trigger: TGTGGCTATTTTTAAAGACAAACAGAACAAGCCTAC...TTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCACCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp ACTCGGAAATCTGAGCAGCAAGGCCAGAAAGCACTGGGGATTTTGAAGATGGGAGCAAAACCAGTAGGCTaGTTCTGTTTGTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: TRKSEQQGQKALGILKMGAKPVG*FCLSLK
Trigger: TTTTAAAGACAAACAGAACAAGCCTACTGGTTTTGC...TCCCATCTTCAAAATCCCCAGTGCTTTCTGGCCTTGCTGCTCAGATTTCCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS-3UTR CAA 90 bp AGGTTACCCACAAATGGCCTGTCACCCAGCACAAGTAACAGTCCCCATTTGAGTCAGCTGAATTTCATTTaGAATACTTACCAACCAGGA +
Preference number: 5 (lower is better)
Translates to: RLPTNGLSPSTSNSPHLSQLNFI*NTYQPG
Trigger: TCCTGGTTGGTAAGTATTCAAAATGAAATTCAGCTG...ACTCAAATGGGGACTGTTACTTGTGCTGGGTGACAGGCCATTTGTGGGTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS GCA 90 bp AATGGCAGGATTTCCTTCTTTCAGGCTGCACGCACAGCATCCTACTaGAGGTATACACTTCATTTTCTTTATCTGTTCACTTGGCTATTG +
Preference number: 5 (lower is better)
Translates to: NGRISFFQAARTASY*RYTLHFLYLFTWLL
Trigger: CAATAGCCAAGTGAACAGATAAAGAAAATGAAGTGTATACCTGCAGTAGGATGCTGTGCGTGCAGCCTGAAAGAAGGAAATCCTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS-3UTR CAA 90 bp TGCCCGCAATCTAACGTCTACAATAACCTCAACCCCCTTAGTTACAGAAAAACTTTTGTTCTGGCATCTTaGTCCCAGAAGCTGAATCTA +
Preference number: 5 (lower is better)
Translates to: CPQSNVYNNLNPLSYRKTFVLAS*SQKLNL
Trigger: TAGATTCAGCTTCTGGGACAAAGATGCCAGAACAAA...AGTTTTTCTGTAACTAAGGGGGTTGAGGTTATTGTAGACGTTAGATTGCGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
CDS TCA 90 bp TGCAGGTATACACTTCATTTTCTTTATCTGTTCACTTGGCTATTGTaGACAGTGCTGCAAGGAACACTAGCAGTACAGGTCTCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: CRYTLHFLYLFTWLL*TVLQGTLAVQVSLQ
Trigger: TTGAAGAGAGACCTGTACTGCTAGTGTTCCTTGCAGCACTGTTCACAATAGCCAAGTGAACAGATAAAGAAAATGAAGTGTATACCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 90 bp TTAAGCACATTTCCATACACCTGCTGGGTATTTGTATGTCTTCTTTaGAGACATGTCTATTCAAGTCTTTGGTCCATTTTTCACGTCACC +
Preference number: 5 (lower is better)
Translates to: LSTFPYTCWVFVCLL*RHVYSSLWSIFHVT
Trigger: GGTGACGTGAAAAATGGACCAAAGACTTGAATAGACATGTCTCCAAAGAAGACATACAAATACCCAGCAGGTGTATGGAAATGTGCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp ACCCTGCAAGGCCGCGTTCACGCCAGCAGAGCCCCATaGGCTGCGAGGCAGACAGCGGCCCTGCCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: TLQGRVHASRAP*AARQTAALPVG
Trigger: CCCCACAGGCAGGGCCGCTGTCTGCCTCGCAGCCCATGGGGCTCTGCTGGCGTGAACGCGGCCTTGCAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp GCCCCGGCGGAAAGCGGCGGCCGGGAGCAGAAGGGTCTGAGGAGTTaGCGAACCTGCTCTGGCGCGAAGGACGAGGGCCAGGAGCGCGGA +
Preference number: 6 (lower is better)
Translates to: APAESGGREQKGLRS*RTCSGAKDEGQERG
Trigger: TCCGCGCTCCTGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCCGGCCGCCGCTTTCCGCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS TCA 72 bp CCCCGGCGGAAAGCGGCGGCCGGGAGCAGAAGGGTCTaGGGAGTTTGCGAACCTGCTCTGGCGCGAAGGACG +
Preference number: 6 (lower is better)
Translates to: PRRKAAAGSRRV*GVCEPALARRT
Trigger: CGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCCGGCCGCCGCTTTCCGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS GCA 72 bp GGCCGGGAGCAGAAGGGTCTGAGGAGTTTGCGAACCTaGTCTGGCGCGAAGGACGAGGGCCAGGAGCGCGGA +
Preference number: 6 (lower is better)
Translates to: GREQKGLRSLRT*SGAKDEGQERG
Trigger: TCCGCGCTCCTGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS GCA 72 bp TCCGGCAAGGCCAGTGGTGCCGCTTACAAGAGCCCCTaGCTCAGCTCCGGAGGACGCCTTGAACCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: SGKASGAAYKSP*LSSGGRLEPGP
Trigger: TGGCCCTGGTTCAAGGCGTCCTCCGGAGCTGAGGCAGGGGCTCTTGTAAGCGGCACCACTGGCCTTGCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp GACAGCGGCCCTGCCTGTGGGGAATGGAGACGTCCCTaGCTAGGCAGACACCCCTCAGGAGGTCACCCGAAG +
Preference number: 6 (lower is better)
Translates to: DSGPACGEWRRP*LGRHPSGGHPK
Trigger: CTTCGGGTGACCTCCTGAGGGGTGTCTGCCTAGCCAGGGACGTCTCCATTCCCCACAGGCAGGGCCGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp GAAAGCGGCGGCCGGGAGCAGAAGGGTCTGAGGAGTTaGCGAACCTGCTCTGGCGCGAAGGACGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: ESGGREQKGLRS*RTCSGAKDEGQ
Trigger: CTGGCCCTCGTCCTTCGCGCCAGAGCAGGTTCGCAAACTCCTCAGACCCTTCTGCTCCCGGCCGCCGCTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS TCA 72 bp CAGGCTCTGCCGCACCCGTCTCACAGGGTAACAGGGTaGAGGGGACGGTGGGTGCAGTGGCCATGCTACAGA +
Preference number: 6 (lower is better)
Translates to: QALPHPSHRVTG*RGRWVQWPCYR
Trigger: TCTGTAGCATGGCCACTGCACCCACCGTCCCCTTCACCCTGTTACCCTGTGAGACGGGTGCGGCAGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp CTACTGTGCGGCACACCAGGAACTGCACAATGCCAGGGGTGTCACTaGCACCAAGAGCCACATGCACTGGCCCTGTGCAAAGGCCGATGG +
Preference number: 6 (lower is better)
Translates to: LLCGTPGTAQCQGCH*HQEPHALALCKGRW
Trigger: CCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAGTTCCTGGTGTGCCGCACAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 72 bp TGGGTGCAGTGGCCATGCTACAGACAAGCAACACGCTaGACTTCGCCCAGTGTTGAGTGTGAGGGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: WVQWPCYRQATR*TSPSVECEGPR
Trigger: CCTTGGGCCCTCACACTCAACACTGGGCGAAGTGCAGCGTGTTGCTTGTCTGTAGCATGGCCACTGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp CAAGAGCCACATGCACTGGCCCTGTGCAAAGGCCGATaGCAATCAGTTCTCAACAACGGAGAGGCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: QEPHALALCKGR*QSVLNNGEARA
Trigger: CGCCCTGGCCTCTCCGTTGTTGAGAACTGATTGCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp GGAGTTACCACTTCCTCCTTCCAGTCGTGGCAACCTGGCCAAAGCTaGGAGGGCCATCCACCCTGCCTAAGCTGGTCATCTGAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: GVTTSSFQSWQPGQS*EGHPPCLSWSSELP
Trigger: CGGAAGCTCAGATGACCAGCTTAGGCAGGGTGGATGGCCCTCCAAGCTTTGGCCAGGTTGCCACGACTGGAAGGAGGAAGTGGTAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 72 bp ATGCCTGGCCCAGGGCGGCTGGTGTTTAATACTACTTaGCTGGAGAAGTACTGCCTGTACGGTGGCACCTCG +
Preference number: 6 (lower is better)
Translates to: MPGPGRLVFNTT*LEKYCLYGGTS
Trigger: CGAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411894.5
CDS GCA 72 bp CAGGGTCTACTGTGCGGCACACCAGGAACTGCACAATaGCAGGGGTGTCACTTGCACCAAGAGCCACATGCA +
Preference number: 6 (lower is better)
Translates to: QGLLCGTPGTAQ*QGCHLHQEPHA
Trigger: TGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAGTTCCTGGTGTGCCGCACAGTAGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 72 bp ATCAGCACAGGGTCTACTGTGCGGCACACCAGGAACTaGACAATGCCAGGGGTGTCACTTGCACCAAGAGCC +
Preference number: 6 (lower is better)
Translates to: ISTGSTVRHTRN*TMPGVSLAPRA
Trigger: GGCTCTTGGTGCAAGTGACACCCCTGGCATTGTGCAGTTCCTGGTGTGCCGCACAGTAGACCCTGTGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 72 bp CCCGTAATGGCTCACACTGGCCGAGCACTTCCTGTGTaGTGGGTTCTGGCCAAAGGCTGTACTGAATCCCCA +
Preference number: 6 (lower is better)
Translates to: PVMAHTGRALPV*WVLAKGCTESP
Trigger: TGGGGATTCAGTACAGCCTTTGGCCAGAACCCAGCACACAGGAAGTGCTCGGCCAGTGTGAGCCATTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527947.5
CDS CCA 72 bp CTGGCCCAGGGCGGCTGGTGTTTAATACTACTTGCCTaGAGAAGTACTGCCTGTACGGTGGCACCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: LAQGGWCLILLA*RSTACTVAPRF
Trigger: GAAGCGAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411894.5
CDS CCA 72 bp GCCAGGGGTGTCACTTGCACCAAGAGCCACATGCACTaGCCCTGTGCAAAGGCCGATGGCAATCAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: ARGVTCTKSHMH*PCAKADGNQFS
Trigger: TGAGAACTGATTGCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 72 bp CGGCTGGTGTTTAATACTACTTGCCTGGAGAAGTACTaGCTGTACGGTGGCACCTCGCTTCCAGGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: RLVFNTTCLEKY*LYGGTSLPGPS
Trigger: ACTGGGCCCTGGAAGCGAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411894.5
CDS GCA 72 bp ACAATGCCAGGGGTGTCACTTGCACCAAGAGCCACATaGACTGGCCCTGTGCAAAGGCCGATGGCAATCAGT +
Preference number: 6 (lower is better)
Translates to: TMPGVSLAPRAT*TGPVQRPMAIS
Trigger: ACTGATTGCCATCGGCCTTTGCACAGGGCCAGTGCATGTGGCTCTTGGTGCAAGTGACACCCCTGGCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp CTGGGTCCCACAGTACAATGCCTGGCCCAGGGCGGCTaGTGTTTAATACTACTTGCCTGGAGAAGTACTGCC +
Preference number: 6 (lower is better)
Translates to: LGPTVQCLAQGG*CLILLAWRSTA
Trigger: GGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAGGCATTGTACTGTGGGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411894.5
ENST00000452119.1
CDS CCA 72 bp GCAGAAAAGCCGACCACCCCGAGGAGAAGCCAACTTTaGAGTTACCACTTCCTCCTTCCAGTCGTGGCAACC +
Preference number: 6 (lower is better)
Translates to: AEKPTTPRRSQL*SYHFLLPVVAT
Trigger: GGTTGCCACGACTGGAAGGAGGAAGTGGTAACTCCAAAGTTGGCTTCTCCTCGGGGTGGTCGGCTTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp GGCAGAAAAGCCGACCACCCCGAGGAGAAGCCAACTTaGGAGTTACCACTTCCTCCTTCCAGTCGTGGCAAC +
Preference number: 6 (lower is better)
Translates to: GRKADHPEEKPT*ELPLPPSSRGN
Trigger: GTTGCCACGACTGGAAGGAGGAAGTGGTAACTCCAAAGTTGGCTTCTCCTCGGGGTGGTCGGCTTTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS TCA 72 bp AGGGACAGAGGCGACACACACTGCATTAACGCAATGTaGCCCTTCCCAGAGGCTCAGTTCCCCCACAAGAGA +
Preference number: 6 (lower is better)
Translates to: RDRGDTHCINAM*PFPEAQFPHKR
Trigger: TCTCTTGTGGGGGAACTGAGCCTCTGGGAAGGGTCACATTGCGTTAATGCAGTGTGTGTCGCCTCTGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395840.6
ENST00000452119.1
CDS TCA 72 bp GGGAGAAGCAGCCTCTGGCATCGTGACAGCTGCTGGTaGTGCACGTTTCCTAAGTACGAAGGAAAACGGCCT +
Preference number: 6 (lower is better)
Translates to: GRSSLWHRDSCW*CTFPKYEGKRP
Trigger: AGGCCGTTTTCCTTCGTACTTAGGAAACGTGCATCACCAGCAGCTGTCACGATGCCAGAGGCTGCTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS GCA 72 bp ATGCCTGGCCCAGGGCGGCTGGTGTTTAATACTACTTaGCTGGAGAAGTACTGCCTGTACGGTGGCACCTAT +
Preference number: 6 (lower is better)
Translates to: MPGPGRLVFNTT*LEKYCLYGGTY
Trigger: ATAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452119.1
CDS CCA 72 bp GCACAGGCCCAGTGTGCATCTGCTGGGCTTTTGGAATaGTCTGTCCACTGTCTTGAACTTCCCAGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: AQAQCASAGLLE*SVHCLELPSSE
Trigger: TTCGCTGCTGGGAAGTTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGCAGATGCACACTGGGCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS CCA 72 bp CTCACACTGGCCGAGCACTTCCTGTGTGCTGGGTTCTaGCCAAAGGCTGTACTGAATCCCCACAACCATTTG +
Preference number: 6 (lower is better)
Translates to: LTLAEHFLCAGF*PKAVLNPHNHL
Trigger: CAAATGGTTGTGGGGATTCAGTACAGCCTTTGGCCAGAACCCAGCACACAGGAAGTGCTCGGCCAGTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527947.5
CDS CCA 72 bp GTAATGGCTCACACTGGCCGAGCACTTCCTGTGTGCTaGGTTCTGGCCAAAGGCTGTACTGAATCCCCACAA +
Preference number: 6 (lower is better)
Translates to: VMAHTGRALPVC*VLAKGCTESPQ
Trigger: TTGTGGGGATTCAGTACAGCCTTTGGCCAGAACCCAGCACACAGGAAGTGCTCGGCCAGTGTGAGCCATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527947.5
CDS CAA 72 bp CCATGTTCCCCACACCCTCCCCAGCGCTTGTTATCTTaGGGCTTTCTGGTAACAGTGGTCCCATCAGCTAGG +
Preference number: 6 (lower is better)
Translates to: PCSPHPPQRLLS*GFLVTVVPSAR
Trigger: CCTAGCTGATGGGACCACTGTTACCAGAAAGCCCAAAGATAACAAGCGCTGGGGAGGGTGTGGGGAACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp GCTACAGACAAGCAACACGCTGCACTTCGCCCAGTGTaGAGTGTGAGGGCCCAAGGGCAGGTCTCTATTCTA +
Preference number: 6 (lower is better)
Translates to: ATDKQHAALRPV*SVRAQGQVSIL
Trigger: TAGAATAGAGACCTGCCCTTGGGCCCTCACACTCAACACTGGGCGAAGTGCAGCGTGTTGCTTGTCTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp CAACAGTGCACAAGGGTTCCATGTTCCCCACACCCTCCCCAGCGCTaGTTATCTTTGGGCTTTCTGGTAACAGTGGTCCCATCAGCTAGG +
Preference number: 6 (lower is better)
Translates to: QQCTRVPCSPHPPQR*LSLGFLVTVVPSAR
Trigger: CCTAGCTGATGGGACCACTGTTACCAGAAAGCCCAAAGATAACAAGCGCTGGGGAGGGTGTGGGGAACATGGAACCCTTGTGCACTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp AGTGGCCATGCTACAGACAAGCAACACGCTGCACTTCGCCCAGTGTaGAGTGTGAGGGCCCAAGGGCAGGTCTCTATTCTACAGAAGAAC +
Preference number: 6 (lower is better)
Translates to: SGHATDKQHAALRPV*SVRAQGQVSILQKN
Trigger: GTTCTTCTGTAGAATAGAGACCTGCCCTTGGGCCCTCACACTCAACACTGGGCGAAGTGCAGCGTGTTGCTTGTCTGTAGCATGGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS TCA 72 bp TGGAGCACCCAGAGCAGGCCCGGGAGTTCTCACCTTTaGCCAGTCGTAGCTGGAAGCGTATGCAAATATGTT +
Preference number: 6 (lower is better)
Translates to: WSTQSRPGSSHL*PVVAGSVCKYV
Trigger: AACATATTTGCATACGCTTCCAGCTACGACTGGTCAAAGGTGAGAACTCCCGGGCCTGCTCTGGGTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527947.5
CDS CCA 72 bp CTGGCCCAGGGCGGCTGGTGTTTAATACTACTTGCCTaGAGAAGTACTGCCTGTACGGTGGCACCTATATAC +
Preference number: 6 (lower is better)
Translates to: LAQGGWCLILLA*RSTACTVAPIY
Trigger: GTATATAGGTGCCACCGTACAGGCAGTACTTCTCCAGGCAAGTAGTATTAAACACCAGCCGCCCTGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452119.1
CDS CAA 72 bp ACAAGGGTTCCATGTTCCCCACACCCTCCCCAGCGCTaGTTATCTTTGGGCTTTCTGGTAACAGTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: TRVPCSPHPPQR*LSLGFLVTVVP
Trigger: TGGGACCACTGTTACCAGAAAGCCCAAAGATAACAAGCGCTGGGGAGGGTGTGGGGAACATGGAACCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp TTGGAGCACCCAGAGCAGGCCCGGGAGTTCTCACCTTaGACCAGTCGTAGCTGGAAGCGTATGCAAATATGT +
Preference number: 6 (lower is better)
Translates to: LEHPEQAREFSP*TSRSWKRMQIC
Trigger: ACATATTTGCATACGCTTCCAGCTACGACTGGTCAAAGGTGAGAACTCCCGGGCCTGCTCTGGGTGCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527947.5
CDS CCA 72 bp ATCAAGCACAGGCCCAGTGTGCATCTGCTGGGCTTTTaGAATGGTCTGTCCACTGTCTTGAACTTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: IKHRPSVHLLGF*NGLSTVLNFPA
Trigger: TGCTGGGAAGTTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGCAGATGCACACTGGGCCTGTGCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS CCA 72 bp CTCATTTTGAACCTGGATTCTTCCCTTAATGCATACTaGGTCCCACAGTACAATGCCTGGCCCAGGGCGGCT +
Preference number: 6 (lower is better)
Translates to: LILNLDSSLNAY*VPQYNAWPRAA
Trigger: AGCCGCCCTGGGCCAGGCATTGTACTGTGGGACCCAGTATGCATTAAGGGAAGAATCCAGGTTCAAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411894.5
ENST00000452119.1
CDS CAA 90 bp ACAAGGGTTCCATGTTCCCCACACCCTCCCCAGCGCTTGTTATCTTaGGGCTTTCTGGTAACAGTGGTCCCATCAGCTAGGAGATGGTAT +
Preference number: 6 (lower is better)
Translates to: TRVPCSPHPPQRLLS*GFLVTVVPSARRWY
Trigger: ATACCATCTCCTAGCTGATGGGACCACTGTTACCAGAAAGCCCAAAGATAACAAGCGCTGGGGAGGGTGTGGGGAACATGGAACCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp GCTGAGCCAGAGTCTCCAGCCACTACTTCTTATTCCTaGGCTTTAGCTCTTCGGCTGCATTACGCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: AEPESPATTSYS*ALALRLHYAGK
Trigger: TTTTCCTGCGTAATGCAGCCGAAGAGCTAAAGCCCAGGAATAAGAAGTAGTGGCTGGAGACTCTGGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000462438.1
CDS TCA 72 bp GTCTTGAACTTCCCAGCAGCGAACATCATTAGCCCATaGTCCTGCAATAAGAAAGTTCCCCGGCAAGGTTGG +
Preference number: 6 (lower is better)
Translates to: VLNFPAANIISP*SCNKKVPRQGW
Trigger: CCAACCTTGCCGGGGAACTTTCTTATTGCAGGATCATGGGCTAATGATGTTCGCTGCTGGGAAGTTCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000452119.1
ENST00000492498.5
ENST00000527947.5
CDS GCA 72 bp GCTGAGGTCCCACATTTTGGCAGTTTTATCACACGATaGCGTAAACACTTTGCTCCCATCGTCACTCCAGCA +
Preference number: 6 (lower is better)
Translates to: AEVPHFGSFITR*RKHFAPIVTPA
Trigger: TGCTGGAGTGACGATGGGAGCAAAGTGTTTACGGCATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS CCA 72 bp ATCTGTAAGTTCTTAGATGACAGAAAAGGCCATGGCTaGTCATCAGCACAGGGTCTACTGTGCGGCACACCA +
Preference number: 6 (lower is better)
Translates to: ICKFLDDRKGHG*SSAQGLLCGTP
Trigger: TGGTGTGCCGCACAGTAGACCCTGTGCTGATGACCAGCCATGGCCTTTTCTGTCATCTAAGAACTTACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp TGCTGTGCGATCTGTATCGCTTGGTTACTGCTGAGGTCCCACATTTaGGCAGTTTTATCACACGATGCCGTAAACACTTTGCTCCCATCG +
Preference number: 6 (lower is better)
Translates to: CCAICIAWLLLRSHI*AVLSHDAVNTLLPS
Trigger: CGATGGGAGCAAAGTGTTTACGGCATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGATACAGATCGCACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS GCA 72 bp ACAGGCTGCCTTTTCACTCTTTTCCATGGTTCCCTCTaGTGTGCAAGAGCTGTTAGTTTAACACAGTTCCAC +
Preference number: 6 (lower is better)
Translates to: TGCLFTLFHGSL*CARAVSLTQFH
Trigger: GTGGAACTGTGTTAAACTAACAGCTCTTGCACAGCAGAGGGAACCATGGAAAAGAGTGAAAAGGCAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp CTTATCCCAGCTCCCAGTCATCACACAGCTGTAGTTTaGAGCTTTGATCCAATGGATGGTTTTAACAGGAGC +
Preference number: 6 (lower is better)
Translates to: LIPAPSHHTAVV*SFDPMDGFNRS
Trigger: GCTCCTGTTAAAACCATCCATTGGATCAAAGCTCCAAACTACAGCTGTGTGATGACTGGGAGCTGGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000492498.5
ENST00000527947.5
CDS CCA 72 bp GGCTTTCTGGTAACAGTGGTCCCATCAGCTAGGAGATaGTATCTCACTGTGGTTTTTGTTTGCCTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GFLVTVVPSARR*YLTVVFVCLSL
Trigger: CAAGGAAAGGCAAACAAAAACCACAGTGAGATACCATCTCCTAGCTGATGGGACCACTGTTACCAGAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp TTAACAGGAGCATCATGCTGTGCGATCTGTATCGCTTaGTTACTGCTGAGGTCCCACATTTTGGCAGTTTTA +
Preference number: 6 (lower is better)
Translates to: LTGASCCAICIA*LLLRSHILAVL
Trigger: TAAAACTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGATACAGATCGCACAGCATGATGCTCCTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS CAA 72 bp TTTAACAGGAGCATCATGCTGTGCGATCTGTATCGCTaGGTTACTGCTGAGGTCCCACATTTTGGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: FNRSIMLCDLYR*VTAEVPHFGSF
Trigger: AAAACTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGATACAGATCGCACAGCATGATGCTCCTGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS GCA 72 bp TTCAATATCCTTCATGGGATTGTGATTGTCTGTAGTTaGACTGCCAAACATGCTGGTCCCACTGGTTCCAAA +
Preference number: 6 (lower is better)
Translates to: FNILHGIVIVCS*TAKHAGPTGSK
Trigger: TTTGGAACCAGTGGGACCAGCATGTTTGGCAGTGCAACTACAGACAATCACAATCCCATGAAGGATATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000452119.1
ENST00000492498.5
ENST00000527947.5
CDS CCA 72 bp GCTCATTTTGAACCTGGAGAAGTACTGCCTGTACGGTaGCACCTATATACGTATACAATAAATACTTGGCGG +
Preference number: 6 (lower is better)
Translates to: AHFEPGEVLPVR*HLYTYTINTWR
Trigger: CCGCCAAGTATTTATTGTATACGTATATAGGTGCCACCGTACAGGCAGTACTTCTCCAGGTTCAAAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395840.6
CDS CAA 72 bp ATCTGTATCGCTTGGTTACTGCTGAGGTCCCACATTTaGGCAGTTTTATCACACGATGCCGTAAACACTTTG +
Preference number: 6 (lower is better)
Translates to: ICIAWLLLRSHI*AVLSHDAVNTL
Trigger: CAAAGTGTTTACGGCATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGATACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000411894.5
ENST00000429339.5
ENST00000492498.5
ENST00000527947.5
CDS GCA 72 bp ATGACCGCCATTCCACCCTTTACTTCTGTGAGTCTATaGTGGATATCACATTTAAGTGGAACCATGCAGTTT +
Preference number: 6 (lower is better)
Translates to: MTAIPPFTSVSL*WISHLSGTMQF
Trigger: AAACTGCATGGTTCCACTTAAATGTGATATCCAGCATAGACTCACAGAAGTAAAGGGTGGAATGGCGGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp TCAGCTAGGAGATGGTATCTCACTGTGGTTTTTGTTTGCCTTTCCTaGATAGTTAGGATGTTAAGCACATTTCCATACACCTGCTGGGTA +
Preference number: 6 (lower is better)
Translates to: SARRWYLTVVFVCLS*IVRMLSTFPYTCWV
Trigger: TACCCAGCAGGTGTATGGAAATGTGCTTAACATCCTAACTATCAAGGAAAGGCAAACAAAAACCACAGTGAGATACCATCTCCTAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 90 bp AGCATCCTACTGCAGGTATACACTTCATTTTCTTTATCTGTTCACTaGGCTATTGTGAACAGTGCTGCAAGGAACACTAGCAGTACAGGT +
Preference number: 6 (lower is better)
Translates to: SILLQVYTSFSLSVH*AIVNSAARNTSSTG
Trigger: ACCTGTACTGCTAGTGTTCCTTGCAGCACTGTTCACAATAGCCAAGTGAACAGATAAAGAAAATGAAGTGTATACCTGCAGTAGGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS TCA 72 bp ACCGATGCTGATGTTTCAGTGGAGATTCTATCCTCCTaGATTCAGAAGGTTGATTCTCTAGCTGATAGACAA +
Preference number: 6 (lower is better)
Translates to: TDADVSVEILSS*IQKVDSLADRQ
Trigger: TTGTCTATCAGCTAGAGAATCAACCTTCTGAATTCAGGAGGATAGAATCTCCACTGAAACATCAGCATCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371242.6
ENST00000395840.6
ENST00000395841.7
ENST00000527947.5
CDS TCA 72 bp TTTGGCGCTGATGTTTCAGTGGAGATTCTATCCTCCTaGATTCAGAAGGTTGATTCTCTAGCTGATAGACAA +
Preference number: 6 (lower is better)
Translates to: FGADVSVEILSS*IQKVDSLADRQ
Trigger: TTGTCTATCAGCTAGAGAATCAACCTTCTGAATTCAGGAGGATAGAATCTCCACTGAAACATCAGCGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492498.5
CDS GCA 72 bp ATTTCCTTCTTTCAGGCTGCACGCACAGCATCCTACTaGAGGTATACACTTCATTTTCTTTATCTGTTCACT +
Preference number: 6 (lower is better)
Translates to: ISFFQAARTASY*RYTLHFLYLFT
Trigger: AGTGAACAGATAAAGAAAATGAAGTGTATACCTGCAGTAGGATGCTGTGCGTGCAGCCTGAAAGAAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp TTCTCACTATTGAGTTGCAGGGGTTCCTTACGTATTTaGGAAATCAATCCCTTGTCAGAAATAGCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: FSLLSCRGSLRI*EINPLSEIASR
Trigger: TCTGGAGGCTATTTCTGACAAGGGATTGATTTCCAAAATACGTAAGGAACCCCTGCAACTCAATAGTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp ACTGCTAGATCGTATGGTGATTCTGTTTTTCATGTTTaGAGGCCTCCAGTTTTCTGTAACGGTTGTGGCATT +
Preference number: 6 (lower is better)
Translates to: TARSYGDSVFHV*RPPVFCNGCGI
Trigger: AATGCCACAACCGTTACAGAAAACTGGAGGCCTCAAAACATGAAAAACAGAATCACCATACGATCTAGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp CTGCAGGTATACACTTCATTTTCTTTATCTGTTCACTaGGCTATTGTGAACAGTGCTGCAAGGAACACTAGC +
Preference number: 6 (lower is better)
Translates to: LQVYTSFSLSVH*AIVNSAARNTS
Trigger: GCTAGTGTTCCTTGCAGCACTGTTCACAATAGCCAAGTGAACAGATAAAGAAAATGAAGTGTATACCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp GTATGTCTTCTTTGGAGACATGTCTATTCAAGTCTTTaGTCCATTTTTCACGTCACCAGTTTTCTCACTATT +
Preference number: 6 (lower is better)
Translates to: VCLLWRHVYSSL*SIFHVTSFLTI
Trigger: AATAGTGAGAAAACTGGTGACGTGAAAAATGGACCAAAGACTTGAATAGACATGTCTCCAAAGAAGACATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp TTTCCATACACCTGCTGGGTATTTGTATGTCTTCTTTaGAGACATGTCTATTCAAGTCTTTGGTCCATTTTT +
Preference number: 6 (lower is better)
Translates to: FPYTCWVFVCLL*RHVYSSLWSIF
Trigger: AAAAATGGACCAAAGACTTGAATAGACATGTCTCCAAAGAAGACATACAAATACCCAGCAGGTGTATGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CCA 72 bp ATAGTTAGGATGTTAAGCACATTTCCATACACCTGCTaGGTATTTGTATGTCTTCTTTGGAGACATGTCTAT +
Preference number: 6 (lower is better)
Translates to: IVRMLSTFPYTC*VFVCLLWRHVY
Trigger: ATAGACATGTCTCCAAAGAAGACATACAAATACCCAGCAGGTGTATGGAAATGTGCTTAACATCCTAACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1
CDS CAA 72 bp ATTTCCATACACCTGCTGGGTATTTGTATGTCTTCTTaGGAGACATGTCTATTCAAGTCTTTGGTCCATTTT +
Preference number: 6 (lower is better)
Translates to: ISIHLLGICMSS*ETCLFKSLVHF
Trigger: AAAATGGACCAAAGACTTGAATAGACATGTCTCCAAAGAAGACATACAAATACCCAGCAGGTGTATGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462438.1