RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RADIL (Homo sapiens)

Ensembl gene IDs: ENSG00000157927

Ensembl transcript IDs: ENST00000399583.4, ENST00000445392.5, ENST00000457174.1, ENST00000469399.1, ENST00000472999.5, ENST00000473130.5, ENST00000484211.1

Found 662 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTaGGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCG +
Preference number: 1 (lower is better)
Translates to: GRRFEPGAMRSRTQN*GSAEGAGRTRCTSP
Trigger: CGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 90 bp TCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCTCTaGGCCAGTGGAAGCAGCTCAGGGAGGGGCCCCTGTCGAGGAGCT +
Preference number: 1 (lower is better)
Translates to: STPGAAAGGRRPGHL*ASGSSSGRGPCRGA
Trigger: AGCTCCTCGACAGGGGCCCCTCCCTGAGCTGCTTCCACTGGCCCAGAGGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 90 bp TCGGGCAGTTCGGGGGCCGAGGACCAGCTCTCACGGCGCTCCGTCTaGAATGGCGGGCACTCCAGGAGTGCCGGGAGGCAGATGTACAGG +
Preference number: 1 (lower is better)
Translates to: SGSSGAEDQLSRRSV*NGGHSRSAGRQMYR
Trigger: CCTGTACATCTGCCTCCCGGCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGAGAGCTGGTCCTCGGCCCCCGAACTGCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 90 bp AGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCTCTGGGCCAGTaGAAGCAGCTCAGGGAGGGGCCCCTGTCGAGGAGCTGGTTGAGA +
Preference number: 1 (lower is better)
Translates to: RSCCRRAQAWTPLGQ*KQLREGPLSRSWLR
Trigger: TCTCAACCAGCTCCTCGACAGGGGCCCCTCCCTGAGCTGCTTCCACTGGCCCAGAGGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR TCA 90 bp TCAGGCCCATCCCCAGCCCGGAGGGGCCTCGTTCCAGCTCCACCGTaGAGACGTAGCAGAAGTCCTCGGTGCTGGAGCTGCGGCTGGACG +
Preference number: 1 (lower is better)
Translates to: SGPSPARRGLVPAPP*RRSRSPRCWSCGWT
Trigger: CGTCCAGCCGCAGCTCCAGCACCGAGGACTTCTGCTACGTCTTCACGGTGGAGCTGGAACGAGGCCCCTCCGGGCTGGGGATGGGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 90 bp GACGTAGCAGAAGTCCTCGGTGCTGGAGCTGCGGCTGGACGGGGCTaGAGGGGACTCCTCCGCAAGGGCTGCAGAGTCTCCTTCCGGAGC +
Preference number: 1 (lower is better)
Translates to: DVAEVLGAGAAAGRG*RGLLRKGCRVSFRS
Trigger: GCTCCGGAAGGAGACTCTGCAGCCCTTGCGGAGGAGTCCCCTCCAGCCCCGTCCAGCCGCAGCTCCAGCACCGAGGACTTCTGCTACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 90 bp TATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATaGGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCGGGGC +
Preference number: 1 (lower is better)
Translates to: YFGNLAVVAVSSQAQ*GAAHRTAGRQRARG
Trigger: GCCCCGCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 90 bp CAGTTCGGGGGCCGAGGACCAGCTCTCACGGCGCTCCGTCTGGAATaGCGGGCACTCCAGGAGTGCCGGGAGGCAGATGTACAGGGACTT +
Preference number: 1 (lower is better)
Translates to: QFGGRGPALTALRLE*RALQECREADVQGL
Trigger: AAGTCCCTGTACATCTGCCTCCCGGCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGAGAGCTGGTCCTCGGCCCCCGAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 90 bp CAGCTGGTAGTGAGTCAGCAGCCGGTGCAGCTGTGCTGGGCTCAGTaGGGGGAACGCAGCCCGCAGGGCTGTCCAGCTCATCTGGATGAG +
Preference number: 1 (lower is better)
Translates to: QLVVSQQPVQLCWAQ*GERSPQGCPAHLDE
Trigger: CTCATCCAGATGAGCTGGACAGCCCTGCGGGCTGCGTTCCCCGCACTGAGCCCAGCACAGCTGCACCGGCTGCTGACTCACTACCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 90 bp GGATCAGGTCCACAGCTCTCAGGTAGCCAAGGCCCAGGAGGCTGCTaGCATTCACCTCCAGGATACGGTCCCCCAGCGACAGGCGCCCGT +
Preference number: 1 (lower is better)
Translates to: GSGPQLSGSQGPGGC*HSPPGYGPPATGAR
Trigger: ACGGGCGCCTGTCGCTGGGGGACCGTATCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCCTTGGCTACCTGAGAGCTGTGGACCTGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 90 bp GACGGATCAGGTCCACAGCTCTCAGGTAGCCAAGGCCCAGGAGGCTaGTGCCATTCACCTCCAGGATACGGTCCCCCAGCGACAGGCGCC +
Preference number: 1 (lower is better)
Translates to: DGSGPQLSGSQGPGG*CHSPPGYGPPATGA
Trigger: GGCGCCTGTCGCTGGGGGACCGTATCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCCTTGGCTACCTGAGAGCTGTGGACCTGATCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 90 bp GAGCAGCGGGATCAGAAGTCCAGCATCCTCTGCCAGGTCTGGCCCTaGTTCAGCTGGGAGGGGCTGTTGGAGCTGCTTCCTGCAGTGCCC +
Preference number: 1 (lower is better)
Translates to: EQRDQKSSILCQVWP*FSWEGLLELLPAVP
Trigger: GGGCACTGCAGGAAGCAGCTCCAACAGCCCCTCCCAGCTGAAGCAGGGCCAGACCTGGCAGAGGATGCTGGACTTCTGATCCCGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 90 bp TCCCAGACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTaGCCGAATGTGCCCGGCTGGAAGTGGGTGGCCGAGTGCTGGATG +
Preference number: 1 (lower is better)
Translates to: SQTVSRISLAILSRS*PNVPGWKWVAECWM
Trigger: CATCCAGCACTCGGCCACCCACTTCCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 90 bp GCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTaGAAGCTCAGCAAGACCAGAACAGCCAGTGGCAGCCCTCACCAG +
Preference number: 1 (lower is better)
Translates to: APRGVPGITGGTAFA*KLSKTRTASGSPHQ
Trigger: CTGGTGAGGGCTGCCACTGGCTGTTCTGGTCTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 90 bp GGCGGACGTAGAGCAGGTGCTGGTAGATGCTGTCGTCCAGGCAGTTaGCTTCCAAGTCCACCTGGAAGCCGTCGCTGGGCAGGACGATGG +
Preference number: 1 (lower is better)
Translates to: GGRRAGAGRCCRPGS*LPSPPGSRRWAGRW
Trigger: CCATCGTCCTGCCCAGCGACGGCTTCCAGGTGGACTTGGAAGCCAACTGCCTGGACGACAGCATCTACCAGCACCTGCTCTACGTCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 90 bp CCAGCTCTCACGGCGCTCCGTCTGGAATGGCGGGCACTCCAGGAGTaGCGGGAGGCAGATGTACAGGGACTTGGAGACATAGTAGACGCA +
Preference number: 1 (lower is better)
Translates to: PALTALRLEWRALQE*READVQGLGDIVDA
Trigger: TGCGTCTACTATGTCTCCAAGTCCCTGTACATCTGCCTCCCGGCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGAGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR TCA 90 bp CTTTGGTTTTCTCCCAGACAGTCTCGCGGATCAGCCTGGCTATCTTaGGCAGGAGCTGCCCGAATGTGCCCGGCTGGAAGTGGGTGGCCG +
Preference number: 1 (lower is better)
Translates to: LWFSPRQSRGSAWLS*AGAARMCPAGSGWP
Trigger: CGGCCACCCACTTCCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTCTGGGAGAAAACCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 90 bp AAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTaGATTCGCCTGGAAGCTCAGCAAGACCAGAACAGCCAGTGGCAG +
Preference number: 1 (lower is better)
Translates to: KSFCSTWCPRDHWWD*IRLEAQQDQNSQWQ
Trigger: CTGCCACTGGCTGTTCTGGTCTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 90 bp GCAGACCCCACAGAAAGTGGCGGACGTAGAGCAGGTGCTGGTAGATaGTGTCGTCCAGGCAGTTGGCTTCCAAGTCCACCTGGAAGCCGT +
Preference number: 1 (lower is better)
Translates to: ADPTESGGRRAGAGR*CRPGSWLPSPPGSR
Trigger: ACGGCTTCCAGGTGGACTTGGAAGCCAACTGCCTGGACGACAGCATCTACCAGCACCTGCTCTACGTCCGCCACTTTCTGTGGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 90 bp AAAGAATGGGCTGCAAGTCTGGAACCAGATCAGCCATGGCGCAGCTaGCCAGCGAGATGGGCTCCTGGAGTTGCGCCTGCTTCTCTGCTA +
Preference number: 1 (lower is better)
Translates to: KEWAASLEPDQPWRS*PARWAPGVAPASLL
Trigger: TAGCAGAGAAGCAGGCGCAACTCCAGGAGCCCATCTCGCTGGCCAGCTGCGCCATGGCTGATCTGGTTCCAGACTTGCAGCCCATTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR TCA 90 bp GGACCCCGCACAGACCTCTGTCCCAGTGAGAGGTGCATCTGCAACTaGTGCCGGGACCCTCTTCCCCAGGGTTTCTCTGTTGCTATCAAA +
Preference number: 1 (lower is better)
Translates to: GPRTDLCPSERCICN*CRDPLPQGFSVAIK
Trigger: TTTGATAGCAACAGAGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGGGACAGAGGTCTGTGCGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 90 bp CAACCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTaGGATCTGCACCAGGTCCAGAAATGCAGACCGTCCAGAGCTGTG +
Preference number: 1 (lower is better)
Translates to: QPPSTVKASNQSPGS*DLHQVQKCRPSRAV
Trigger: CACAGCTCTGGACGGTCTGCATTTCTGGACCTGGTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 90 bp AAGTACAGGAGCTCGATGGAGTTAGACATCCAGAAAAGAATGGGCTaGAAGTCTGGAACCAGATCAGCCATGGCGCAGCTGGCCAGCGAG +
Preference number: 1 (lower is better)
Translates to: KYRSSMELDIQKRMG*KSGTRSAMAQLASE
Trigger: CTCGCTGGCCAGCTGCGCCATGGCTGATCTGGTTCCAGACTTGCAGCCCATTCTTTTCTGGATGTCTAACTCCATCGAGCTCCTGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 90 bp GGAAGAAGAGATAAGCCCCCTTCTCTTTGTGGGAGGAACTGTTGGTaGCCACCTTTGGAAATGCCTTGCCACTGTCTTTCCTCTGGCCAC +
Preference number: 1 (lower is better)
Translates to: GRRDKPPSLCGRNCW*PPLEMPCHCLSSGH
Trigger: GTGGCCAGAGGAAAGACAGTGGCAAGGCATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACAAAGAGAAGGGGGCTTATCTCTTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 90 bp CAGGGAAGAAGAGATAAGCCCCCTTCTCTTTGTGGGAGGAACTGTTaGTGGCCACCTTTGGAAATGCCTTGCCACTGTCTTTCCTCTGGC +
Preference number: 1 (lower is better)
Translates to: QGRRDKPPSLCGRNC*WPPLEMPCHCLSSG
Trigger: GCCAGAGGAAAGACAGTGGCAAGGCATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACAAAGAGAAGGGGGCTTATCTCTTCTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 90 bp AGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTaGATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGC +
Preference number: 1 (lower is better)
Translates to: RPFSLAWKVPEYHLC*ILLFGASQKAGEYC
Trigger: GCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 90 bp CAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATaGTGCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATAT +
Preference number: 1 (lower is better)
Translates to: QRPFSLAWKVPEYHL*CILLFGASQKAGEY
Trigger: ATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 90 bp TTCCAGGAGCATGAAAATAGAAACCAAAGGCCCTTCAGTCTGGCTTaGAAGGTCCCAGAATATCACTTATGCTGCATCCTGTTGTTCGGA +
Preference number: 1 (lower is better)
Translates to: FQEHENRNQRPFSLA*KVPEYHLCCILLFG
Trigger: TCCGAACAACAGGATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGGTTTCTATTTTCATGCTCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGGCTCCCAGGTGCTCATaGGGCCCATGGCCGAGGCCA +
Preference number: 2 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAAPRCS*GPWPRP
Trigger: TGGCCTCGGCCATGGGCCCCATGAGCACCTGGGAGC...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGCTCTGGGGCCTGTGCTaGGCAGCGGGATCAGAAGTC +
Preference number: 2 (lower is better)
Translates to: RARGGRAAPRRSAHQGAALWGLC*AAGSEV
Trigger: GACTTCTGATCCCGCTGCTCAGCACAGGCCCCAGAG...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCCCAGGGGGACGCTGGTaGGGATTAAGGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGPGGRW*GLRAWG
Trigger: GCCCCAGGCCCTTAATCCTCACCAGCGTCCCCCTGG...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCCGGGCACTCCAGGAGTaGCGGGAGGCAGATGTACAG +
Preference number: 2 (lower is better)
Translates to: RVGRGRGADALHLAVAHTRALQE*READVQ
Trigger: CTGTACATCTGCCTCCCGGCACTCCTGGAGTGCCCG...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGGCTGGGAGGGGCTGTTaGAGCTGCTTCCTGCAGTGC +
Preference number: 2 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAAGRGC*SCFLQC
Trigger: GCACTGCAGGAAGCAGCTCCAACAGCCCCTCCCAGC...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCCTGGGGCCGCCAGCCTaGTATCAGGGCCACGCTGGT +
Preference number: 2 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGLGPPA*YQGHAG
Trigger: ACCAGCGTGGCCCTGATACCAGGCTGGCGGCCCCAG...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCTGGTCAGCCAGCTGGTaGAGAGGGACGCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSWSASW*RGTLAS
Trigger: GGAGGCCAGCGTCCCTCTCCACCAGCTGGCTGACCA...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCAGTTGGTGGAGCTGCTaGGGATGCCCAGCGACCCAC +
Preference number: 2 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSSWWSC*GCPATH
Trigger: GTGGGTCGCTGGGCATCCTCAGCAGCTCCACCAACT...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTGAGTGCTGGGAGGCGTaGGCAAGCAGGACGAGTCCG +
Preference number: 2 (lower is better)
Translates to: GEGRWPPARVRAGGQGDAECWEA*ASRTSP
Trigger: CGGACTCGTCCTGCTTGCTCACGCCTCCCAGCACTC...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCAGGTCCAGGGCTGCCTaGTACACAGACACCACGCGG +
Preference number: 2 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSRSRAA*YTDTTR
Trigger: CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCT...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGGGCATGTCCCCAGGGTaGGGCTCCCCACCCGGGACC +
Preference number: 2 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQGMSPG*GSPPGT
Trigger: GGTCCCGGGTGGGGAGCCTCACCCTGGGGACATGCC...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTCTCTGGGGCCTGTGCTaGGCAGCGGGATCAGAAGTC +
Preference number: 2 (lower is better)
Translates to: GEGRWPPARVRAGGQGDALWGLC*AAGSEV
Trigger: GACTTCTGATCCCGCTGCTCAGCACAGGCCCCAGAG...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCCTCCAGAACATCCTCTaGCCTGAAGGCCTCGGGGCT +
Preference number: 2 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSLQNIL*PEGLGA
Trigger: AGCCCCGAGGCCTTCAGGTCAGAGGATGTTCTGGAG...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCCTGTGCTGGGCTCAGTaGGGGGAACGCAGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGALCWAQ*GERSPQ
Trigger: CTGCGGGCTGCGTTCCCCGCACTGAGCCCAGCACAG...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTGAACATCCTCTGACCTaGAGGCCTCGGGGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: GEGRWPPARVRAGGQGDAEHPLT*RPRGCP
Trigger: AGGACAGCCCCGAGGCCTTCAGGTCAGAGGATGTTC...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCTCGAGCCAGGCGCAATaGGGAGCCGCACACAGAACT +
Preference number: 2 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGSSQAQ*GAAHRT
Trigger: AGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp TGCAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTGAGTCCGTTCCTCTGGGCCACTTCCCGGGCTaGTGGGCCAGGGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: CRVSFRSCTPEAAESVPLGHFPG*WARVPG
Trigger: CCCAGGGACCCTGGCCCAGCAGCCCGGGAAGTGGCC...CAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCTGGTCAGCCAGCTGGTaGAGAGGGACGCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RARRNAEPHTELRVGRGRWSASW*RGTLAS
Trigger: GGAGGCCAGCGTCCCTCTCCACCAGCTGGCTGACCA...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTGCCTCGGGGCTGTCCTaGGCCCCTGGCTCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: GLGASETIRPVHFPTPGCASGLS*APGSQV
Trigger: CACCTGGGAGCCAGGGGCCCAGGACAGCCCCGAGGC...ACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCGGGCAGGACGATGGGTaGGGGGTTTTCGTAGGACTC +
Preference number: 2 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGGQDDG*GVFVGL
Trigger: GAGTCCTACGAAAACCCCCCACCCATCGTCCTGCCC...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGAAGCAGGGCCCAGGGTaGGCTCGGCGCCTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQKQGPG*ARRLRD
Trigger: GTCTCTGAGGCGCCGAGCCCACCCTGGGCCCTGCTT...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp TCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGGCGCTCCGTCTGGAATaGCGGGCACTCCAGGAGTGC +
Preference number: 2 (lower is better)
Translates to: SSQAQCGAAHRTAGRQRAALRLE*RALQEC
Trigger: GCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGC...CGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACACCCCGGAGGCCGCTaGGTCCGTTCCTCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTHPGGR*VRSSAS
Trigger: AGAGGCAGAGGAACGGACTCAGCGGCCTCCGGGGTG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACTGCCAGGTCTGGCCCTaGTTCAGCTGGGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNCQVWP*FSWEGL
Trigger: CAGCCCCTCCCAGCTGAAGCAGGGCCAGACCTGGCA...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp TTCTGGAAGAAGTGCTCTCCAGCCGCCCCGAAGCCGGCGCTCCGCATCCACTCCACCTCGGGGTGCACCTaGAGCTGCCGCAGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: FWKKCSPAAPKPALRIHSTSGCT*SCRRRS
Trigger: GGACCTCCTGCGGCAGCTGCAGGTGCACCCCGAGGT...GGAGTGGATGCGGAGCGCCGGCTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCCCACTTTCCAACGCCTaGGTGTCTAGACCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: RVGRGRGADALHLAVAHTPLSNA*VSRPFS
Trigger: AGAGAAAGGTCTAGACACCCAGGCGTTGGAAAGTGG...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp TCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGAGGGAGCAGGAGTCCTaGGAGAGGAAGCAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: SSQAQCGAAHRTAGRQRAREQES*ERKQGP
Trigger: TGGGCCCTGCTTCCTCTCCCAGGACTCCTGCTCCCT...CGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCTGTCTGGGGCCTGGCTaGGAAGTCGTTCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGACLGPG*EVVLLH
Trigger: GTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACA...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGTGCCCGGCTGGAAGTaGGTGGCCGAGTGCTGGATG +
Preference number: 2 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNVPGWK*VAECWM
Trigger: CATCCAGCACTCGGCCACCCACTTCCAGCCGGGCAC...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGCCGAATGTGCCCGGCTaGAAGTGGGTGGCCGAGTGC +
Preference number: 2 (lower is better)
Translates to: GGLGASETIRPVHFPTPGPNVPG*KWVAEC
Trigger: GCACTCGGCCACCCACTTCCAGCCGGGCACATTCGG...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCGAACCAGATCAGCCATaGCGCAGCTGGCCAGCGAGA +
Preference number: 2 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGAEPDQP*RSWPAR
Trigger: TCTCGCTGGCCAGCTGCGCCATGGCTGATCTGGTTC...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCCACTTGATGTCAGTTTaGAATCAGCCTGGCCAACGT +
Preference number: 2 (lower is better)
Translates to: RVGRGRGADALHLAVAHTHLMSV*NQPGQR
Trigger: ACGTTGGCCAGGCTGATTTCAAACTGACATCAAGTG...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp TTCACCTCCAGGATACGGTCCCCCAGCGACAGGCGCCCGTCGGCCGCTGCGGGGATTCCTTCGAGCCTGTaGTGTCCAGCTGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: FTSRIRSPSDRRPSAAAGIPSSL*CPAAPP
Trigger: TGGAGGAGCAGCTGGACATCACAGGCTCGAAGGAAT...CCCCGCAGCGGCCGACGGGCGCCTGTCGCTGGGGGACCGTATCCTGGAGGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCCCAGGTGGGACCGGGTaGCGGGCCTGTGGGGGTGTC +
Preference number: 2 (lower is better)
Translates to: GIRATLVALVGERNSGGSPGGTG*RACGGV
Trigger: GACACCCCCACAGGCCCGGCACCCGGTCCCACCTGG...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp TCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCGCTGGCCGTCAGCGTaGAGGAGAACAGCGATTCCT +
Preference number: 2 (lower is better)
Translates to: SSQAQCGAAHRTAGRQRARWPSA*RRTAIP
Trigger: AGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCG...CGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACAGCAGAAGTCCTCGGTaGTGGAGCTGCGGCTGGACG +
Preference number: 2 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNSRSPR*WSCGWT
Trigger: CGTCCAGCCGCAGCTCCAGCACCGAGGACTTCTGCT...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGCCCAGTGTCACCAGGTaGGACCGGGTGCCGGGCCTG +
Preference number: 2 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGPSVTR*DRVPGL
Trigger: CAGGCCCGGCACCCGGTCCCACCTGGTGACACTGGG...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGGCAGGCAGAGGCCATaGGGAGCCCCTGCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREGRQRP*GAPAAP
Trigger: AGGGGCCGCAGGGGCTCCCCATGGCCTCTGCCTGCC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAATTCTCCCGTGCCGGTaGCAGGCAGAGGCCATGGGG +
Preference number: 2 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPILPCR*QAEAMG
Trigger: CCCCATGGCCTCTGCCTGCCACCGGCACGGGAGAAT...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAAGAGCTTCTTTCCATaGATGCTGAGTTCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: RVGRGRGADALHLAVAHTKSFFP*MLSSRS
Trigger: GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTT...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACAGCCATGGCGCAGCTaGCCAGCGAGATGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTQPWRS*PARWAP
Trigger: AGGAGCCCATCTCGCTGGCCAGCTGCGCCATGGCTG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGTCACGGCGCTCCGTCTaGAATGGCGGGCACTCCAGG +
Preference number: 2 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQSRRSV*NGGHSR
Trigger: CCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGA...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGCCGGTGCAGCTGTGCTaGGCTCAGTGCGGGGAACGC +
Preference number: 2 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGPVQLC*AQCGER
Trigger: GCGTTCCCCGCACTGAGCCCAGCACAGCTGCACCGG...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCCTCCCTTCCTTGGGGTaGTGCCAAGAGCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGALPSLG*CQELLS
Trigger: GGAAAGAAGCTCTTGGCATCACCCCAAGGAAGGGAG...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCAGGTGGGACCGGGTaGCGGGCCTGTGGGGGTGTC +
Preference number: 2 (lower is better)
Translates to: SILGTWQWSPFRARRNAEPGGTG*RACGGV
Trigger: GACACCCCCACAGGCCCGGCACCCGGTCCCACCTGG...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAAGGCCGGAGAATATTaGAGGGAAGAAGAGATAAGC +
Preference number: 2 (lower is better)
Translates to: RVGRGRGADALHLAVAHTKAGEY*REEEIS
Trigger: GCTTATCTCTTCTTCCCTGCAATATTCTCCGGCCTT...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTTGCCGGGGCTGGCTCTaGTCCGCAGACCCCACAGAA +
Preference number: 2 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSCRGWL*SADPTE
Trigger: TTCTGTGGGGTCTGCGGAGCAGAGCCAGCCCCGGCA...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCCCAGTGTCACCAGGTaGGACCGGGTGCCGGGCCTG +
Preference number: 2 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREPSVTR*DRVPGL
Trigger: CAGGCCCGGCACCCGGTCCCACCTGGTGACACTGGG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGACCAGAACAGCCAGTaGCAGCCCTCACCAGTCCCG +
Preference number: 2 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTDQNSQ*QPSPVP
Trigger: CGGGACTGGTGAGGGCTGCCACTGGCTGTTCTGGTC...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGAGATGTACAGGGACTTaGAGACATAGTAGACGCACT +
Preference number: 2 (lower is better)
Translates to: RARGGRAAPRRSAHQGAARCTGT*RHSRRT
Trigger: AGTGCGTCTACTATGTCTCCAAGTCCCTGTACATCT...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp TCCGTTCCTCTGCCTCTCTGGGAGCGCTTTTCCACAGGGGCCGCCGGACTCTGGGCTTCCAAGTCCACCTaGAAGCCGTCGCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SVPLPLWERFSTGAAGLWASKST*KPSLGR
Trigger: CCTGCCCAGCGACGGCTTCCAGGTGGACTTGGAAGC...CCAGAGTCCGGCGGCCCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCACCGTCAAGGACCACGTaGTGCATACCCTCGGGGCAC +
Preference number: 2 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPPSRTT*CIPSGH
Trigger: GTGCCCCGAGGGTATGCACCACGTGGTCCTTGACGG...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp CCAGTGAGAGGTGCATCTGCAACTGATGCCGGGACCCTCTTCCCCAGGGTTTCTGCCTGCTGCCCGAGTTaGGACCCCAGCAGGGCACCC +
Preference number: 2 (lower is better)
Translates to: PVRGASATDAGTLFPRVSACCPS*DPSRAP
Trigger: GGGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGC...AGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAAGCCGCACACAGAACTaGGGGTCGGCAGAGGGCGCG +
Preference number: 2 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGSRTQN*GSAEGA
Trigger: CGCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCT...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGATTCTCCCGTGCCGGTaGCAGGCAGAGGCCATGGGG +
Preference number: 2 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKILPCR*QAEAMG
Trigger: CCCCATGGCCTCTGCCTGCCACCGGCACGGGAGAAT...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTGCTGGGAGGGGCTGTTaGAGCTGCTTCCTGCAGTGC +
Preference number: 2 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSAGRGC*SCFLQC
Trigger: GCACTGCAGGAAGCAGCTCCAACAGCCCCTCCCAGC...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGGCAAGTGCCCTGCCCTaGTCCTGCGCATGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKASALP*SCAWSA
Trigger: GGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGC...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCCCGGGATCACTGGTaGGACTGCATTCGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPRDHW*DCIRLE
Trigger: TTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCACCATGGCCTCCTCGCTaGCCGTCAGCGTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LGSRSAPRGVPGITGGTAPWPPR*PSACRR
Trigger: TCTCCTGCACGCTGACGGCCAGCGAGGAGGCCATGG...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTAGGCTCAGGGCCAAGTaGAGTGCTGGGAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSRLRAK*SAGRRE
Trigger: CTCACGCCTCCCAGCACTCCACTTGGCCCTGAGCCT...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCAGGCATGTCCCCAGGGTaGGGCTCCCCACCCGGGACC +
Preference number: 2 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSGMSPG*GSPPGT
Trigger: GGTCCCGGGTGGGGAGCCTCACCCTGGGGACATGCC...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCAGGGGGACGCTGGTaGGGATTAAGGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: SILGTWQWSPFRARRNAEPGGRW*GLRAWG
Trigger: GCCCCAGGCCCTTAATCCTCACCAGCGTCCCCCTGG...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACATGTCGAGGAGCTGGTTaGGAAGCAGTGTCCCGGAGA +
Preference number: 2 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTCRGAG*EAVSRR
Trigger: TCTCCGGGACACTGCTTCTCAACCAGCTCCTCGACA...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTATCTTGAGCAGGAGCTaGCCGAATGTGCCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSILSRS*PNVPGW
Trigger: CCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGAT...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAAGACCTCTGTCCCAGTaGGAGGTGCATCTGCAACTG +
Preference number: 2 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTRPLSQ*EVHLQL
Trigger: CAGTTGCAGATGCACCTCTCACTGGGACAGAGGTCT...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCATCGAGCCAGGCGCAATaGGGAGCCGCACACAGAACT +
Preference number: 2 (lower is better)
Translates to: LGSRSAPRGVPGITGGTASSQAQ*GAAHRT
Trigger: AGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp GGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCACCAGGTCCAGAAATaGAGACCGTCCAGAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GLGASETIRPVHFPTPGCHQVQK*RPSRAV
Trigger: CACAGCTCTGGACGGTCTGCATTTCTGGACCTGGTG...ACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp TTCTGGAAGAAGTGCTCTCCAGCCGCCCCGAAGCCGGCGCTCCGCATCCACTCCAACGTCATGATCCTCTaGAGCAGCGTGTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: FWKKCSPAAPKPALRIHSNVMIL*SSVSSR
Trigger: CCTGGAGGACACGCTGCTGCAGAGGATCATGACGTT...GGAGTGGATGCGGAGCGCCGGCTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCCTAGAGAGGGGGCGTaGGGAAATGGATCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: GLGASETIRPVHFPTPGCPREGA*GNGSSW
Trigger: CCAAGAAGATCCATTTCCGCACGCCCCCTCTCTAGG...ACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGCCACTGTCTTTCCTCTaGCCACAGTCCACACCCCTC +
Preference number: 2 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGPLSFL*PQSTPL
Trigger: GAGGGGTGTGGACTGTGGCCAGAGGAAAGACAGTGG...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGGGGGCCTCCCTTCCTTaGGGTGATGCCAAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKGASLP*GDAKSF
Trigger: GAAGCTCTTGGCATCACCCCAAGGAAGGGAGGCCCC...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAAGATTGTCTGGGGCCTaGCTGGGAAGTCGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPRLSGA*LGSRSA
Trigger: AGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTCCTCGCTGGCCGTCAGCGTGCAGGAGAACAGCGATTCCTTCGAGCCTGTGATCCGGCTGGAAGTGGGTaGCCGAGTGCTGGATGCAGA +
Preference number: 2 (lower is better)
Translates to: LLAGRQRAGEQRFLRACDPAGSG*PSAGCR
Trigger: TCTGCATCCAGCACTCGGCCACCCACTTCCAGCCGG...ATCACAGGCTCGAAGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCACATCCAGAAAAGAATaGGCTGCAAGTCTGGAACCA +
Preference number: 2 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTTSRKE*AASLEP
Trigger: TGGTTCCAGACTTGCAGCCCATTCTTTTCTGGATGT...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCACCCCTGTCGAGGAGCTaGTTGAGAAGCAGTGTCCCG +
Preference number: 2 (lower is better)
Translates to: LGSRSAPRGVPGITGGTAPLSRS*LRSSVP
Trigger: CGGGACACTGCTTCTCAACCAGCTCCTCGACAGGGG...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp TGCAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTGAGTCCGTTCCTCTGCTGAGGAGAATTGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: CRVSFRSCTPEAAESVPLLRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCAATTCTCCTCAG...CAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGGTTCCAGCTCCACCGTaGAGACGTAGCAGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGVPAPP*RRSRSP
Trigger: AGGACTTCTGCTACGTCTTCACGGTGGAGCTGGAAC...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACCCTTTGGAAATGCCTTaGCACTGTCTTTCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNPLEMP*HCLSSG
Trigger: GCCAGAGGAAAGACAGTGGCAAGGCATTTCCAAAGG...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CTCCTCGCTGGCCGTCAGCGTGCAGGAGAACAGCGATTCCTTCGAGCCTGTGATTGGCCGAGTGCTGGATaGAGAGGCACAGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: LLAGRQRAGEQRFLRACDWPSAG*RGTGGR
Trigger: CCTTCCTCCTGTGCCTCTGCATCCAGCACTCGGCCA...ATCACAGGCTCGAAGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCGAGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATGGGCTCCTGGAGTTaGGCCTGCTTCTCTGCTAGT +
Preference number: 2 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGMGSWS*ACFSAS
Trigger: ACTAGCAGAGAAGCAGGCGCAACTCCAGGAGCCCAT...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGATTGGGAACCTGGCAGTaGTCGCCGTTTCGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGLGTWQ*SPFRAR
Trigger: CCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAA...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCGCTCTGCATGTAGAGTaGGCATTTCTGCTGGATAAA +
Preference number: 2 (lower is better)
Translates to: RARRNAEPHTELRVGRGRALHVE*AFLLDK
Trigger: TTTATCCAGCAGAAATGCCCACTCTACATGCAGAGC...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGCAGGGCTGCCGGGGCTaGCTCTGCTCCGCAGACCCC +
Preference number: 2 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKQGCRG*LCSADP
Trigger: GGGGTCTGCGGAGCAGAGCCAGCCCCGGCAGCCCTG...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CAA 90 bp TCTTTGGTTTTCTCCCAGACAGTCTCGCGGATCAGCCTGGCTATCTaGAGCAGGAGCTGCCCGAATGTGCCCGGCTGGAAGTGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: SLVFSQTVSRISLAI*SRSCPNVPGWKWVA
Trigger: GGCCACCCACTTCCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTCTGGGAGAAAACCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp GGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTGGCGGGCAGATCACTTaGTGTCAGTTTGAAATCAGC +
Preference number: 2 (lower is better)
Translates to: GLGASETIRPVHFPTPGCGGQIT*CQFEIS
Trigger: GCTGATTTCAAACTGACATCAAGTGATCTGCCCGCC...ACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACCACTGCATTCTCCCGTaGCGGTGGCAGGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHHCILP*RWQAEA
Trigger: GGCCTCTGCCTGCCACCGGCACGGGAGAATGCAGTG...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGATGACAGCTGTCACTaGATTCTCCCGTGCCGGTGG +
Preference number: 2 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREDDSCH*ILPCRW
Trigger: CCACCGGCACGGGAGAATGCAGTGACAGCTGTCATC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCGCCCTGCCCTGGTCCTaGGCATGGTCAGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSALPWS*AWSASW
Trigger: CCAGCTGGCTGACCATGCGCAGGACCAGGGCAGGGC...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp TGCAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTGAGTCCGTTCCTCTGCCACTTTCCAACGCCTaGGTGTCTAGACCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: CRVSFRSCTPEAAESVPLPLSNA*VSRPFS
Trigger: AGAGAAAGGTCTAGACACCCAGGCGTTGGAAAGTGG...CAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGAGGTGCATCTGCAACTaGTGCCGGGACCCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVRCICN*CRDPLP
Trigger: GGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCT...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCAAGGGAGCAGGAGTCCTaGGAGAGGAAGCAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSREQES*ERKQGP
Trigger: TGGGCCCTGCTTCCTCTCCCAGGACTCCTGCTCCCT...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGAAAGGCCCTTCAGTCTaGCTTGGAAGGTCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGKGPSV*LGRSQN
Trigger: ATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTT...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGCCCCGGGATCACTGGTaGGACTGCATTCGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVPRDHW*DCIRLE
Trigger: TTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGG...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCAAATGGGCTGCAAGTCTaGAACCAGATCAGCCATGGC +
Preference number: 2 (lower is better)
Translates to: LGSRSAPRGVPGITGGTANGLQV*NQISHG
Trigger: GCCATGGCTGATCTGGTTCCAGACTTGCAGCCCATT...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGGGGCGTGCGGAAATaGATCTTCTTGGCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGGGVRK*IFLAVS
Trigger: GGAAACAGCCAAGAAGATCCATTTCCGCACGCCCCC...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGGAACCTACACTGAGATaGATGTTATCAACAGGCATG +
Preference number: 2 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTREPTLR*MLSTGM
Trigger: CATGCCTGTTGATAACATGCATCTCAGTGTAGGTTC...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAAAGGCCGGAGAATATTaGAGGGAAGAAGAGATAAGC +
Preference number: 2 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTKAGEY*REEEIS
Trigger: GCTTATCTCTTCTTCCCTGCAATATTCTCCGGCCTT...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTAAGAGCTTCTTTCCATaGATGCTGAGTTCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSKSFFP*MLSSRS
Trigger: GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTT...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCCTCATCTGGATGAGCTaGGCCCTGGGTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSLIWMS*ALGVAS
Trigger: GCTGGCCACACCCAGGGCCCAGCTCATCCAGATGAG...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACAGCTTCTGGAAGAAGTaGTCTCCAGCCGCCCCGAAG +
Preference number: 2 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHSFWKK*SPAAPK
Trigger: CTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAAGCT...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGAGTATTTTGGGAACCTaGCAGTGGTCGCCGTTTCGA +
Preference number: 2 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRESILGT*QWSPFR
Trigger: TCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACCCACTGTCTTTCCTCTaGCCACAGTCCACACCCCTC +
Preference number: 2 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHPLSFL*PQSTPL
Trigger: GAGGGGTGTGGACTGTGGCCAGAGGAAAGACAGTGG...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGTGTGGGAGGAACTGTTaGTGGCCACCTTTGGAAATG +
Preference number: 2 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRECGRNC*WPPLEM
Trigger: CATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACA...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGTCTCTGCTAGTTCTTTaGTTTTCTCCCAGACAGTCT +
Preference number: 2 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQSLLVL*FSPRQS
Trigger: AGACTGTCTGGGAGAAAACCAAAGAACTAGCAGAGA...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCAGCTCGATCAACGTCATaGTCCTCTGCAGCAGCGTGT +
Preference number: 2 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSARSTS*SSAAAC
Trigger: ACACGCTGCTGCAGAGGATCATGACGTTGATCGAGC...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCTCAAGGACCACGTGGTaGATACCCTCGGGGCACACT +
Preference number: 2 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSSRTTW*IPSGHT
Trigger: AGTGTGCCCCGAGGGTATGCACCACGTGGTCCTTGA...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCCGGGGGCGCCCAGGTaGGTGTGCATCCCGTCGATC +
Preference number: 2 (lower is better)
Translates to: CQELLSMDAEFQEHENRNPGAPR*VCIPSI
Trigger: GATCGACGGGATGCACACGCACCTGGGCGCCCCCGG...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCAGTGAGAGGTGCATCTGCAACTGATGCCGGGACCCTCTTCCCCAGGGTTTCTACCCGGGACCCAACTTaGTCAGTTACAAAACAGGGA +
Preference number: 2 (lower is better)
Translates to: PVRGASATDAGTLFPRVSTRDPT*SVTKQG
Trigger: TCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGT...AGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACTGTCGTCCAGGCAGTTaGCTTCCAAGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHCRPGS*LPSPPG
Trigger: TCCAGGTGGACTTGGAAGCCAACTGCCTGGACGACA...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGGAATATCACTTATGCTaGATCCTGTTGTTCGGAGCA +
Preference number: 2 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKEYHLC*ILLFGA
Trigger: TGCTCCGAACAACAGGATGCAGCATAAGTGATATTC...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CGGGAGGCAGATGTACAGGGACTTGGAGACATAGTAGACGCACTGCTGGAAGGCTCCTGGAGTTGCGCCTaGTTCTCTGCTAGTTCTTTG +
Preference number: 2 (lower is better)
Translates to: READVQGLGDIVDALLEGSWSCA*FSASSL
Trigger: CAAAGAACTAGCAGAGAAGCAGGCGCAACTCCAGGA...GCCTTCCAGCAGTGCGTCTACTATGTCTCCAAGTCCCTGTACATCTGCCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATTCAGCCTGGCTATCTTaGGCAGGAGCTGCCCGAATG +
Preference number: 2 (lower is better)
Translates to: PKALQSGLEGPRISLMLHSAWLS*AGAARM
Trigger: CATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGA...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACGGCCACCTTTGGAAATaGCTTGCCACTGTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHGHLWK*LATVFP
Trigger: AGGAAAGACAGTGGCAAGGCATTTCCAAAGGTGGCC...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAATATCACTTATGCTaGATCCTGTTGTTCGGAGCA +
Preference number: 2 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREEYHLC*ILLFGA
Trigger: TGCTCCGAACAACAGGATGCAGCATAAGTGATATTC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGGCAAGTGCCCTGCCCTaGTCCTGCGCATGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRASALP*SCAWSA
Trigger: GGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGC...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCACCCTTCAGTCTGGCTTaGAAGGTCCCAGAATATCAC +
Preference number: 2 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSPFSLA*KVPEYH
Trigger: GTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGG...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACAAAGGCCCTTCAGTCTaGCTTGGAAGGTCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHKGPSV*LGRSQN
Trigger: ATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTT...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACAGTTGGTGGAGCTGCTaGGGATGCCCAGCGACCCAC +
Preference number: 2 (lower is better)
Translates to: CQELLSMDAEFQEHENRNSWWSC*GCPATH
Trigger: GTGGGTCGCTGGGCATCCTCAGCAGCTCCACCAACT...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCAAGTGGGCATTTCTGCTaGATAAAGTACAGGAGCTCG +
Preference number: 2 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSSGHFC*IKYRSS
Trigger: CGAGCTCCTGTACTTTATCCAGCAGAAATGCCCACT...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CAA 90 bp ATGCTGCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATaGCAGGGAAGAAGAGATAAGCCCCCTTCTCTTTGTGGGAGGAAC +
Preference number: 2 (lower is better)
Translates to: MLHPVVRSKSEGRRI*QGRRDKPPSLCGRN
Trigger: GTTCCTCCCACAAAGAGAAGGGGGCTTATCTCTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGAACCTACACTGAGATaGATGTTATCAACAGGCATG +
Preference number: 2 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVEPTLR*MLSTGM
Trigger: CATGCCTGTTGATAACATGCATCTCAGTGTAGGTTC...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCCAGCTGCTCCTCCATaGTCTGCATGTAGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: CQELLSMDAEFQEHENRNPAAPP*SACRVG
Trigger: GCCCACTCTACATGCAGAGCATGGAGGAGCAGCTGG...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR TCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACATCTTCTTCCCGCCATaGCGGATCAGGTCCACAGCT +
Preference number: 2 (lower is better)
Translates to: CQELLSMDAEFQEHENRNIFFPP*RIRSTA
Trigger: AGCTGTGGACCTGATCCGTCATGGCGGGAAGAAGAT...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR GCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCACCAGGTCCAGAAATaGAGACCGTCCAGAGCTGTG +
Preference number: 2 (lower is better)
Translates to: CQELLSMDAEFQEHENRNHQVQK*RPSRAV
Trigger: CACAGCTCTGGACGGTCTGCATTTCTGGACCTGGTG...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR TCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACTGTTGCTATCAAAGATaGCCCTGGGCCACCAGTTCC +
Preference number: 2 (lower is better)
Translates to: CQELLSMDAEFQEHENRNCCYQR*PWATSS
Trigger: GGAACTGGTGGCCCAGGGTCATCTTTGATAGCAACA...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGACCCGGGACCCAACTTaGTCAGTTACAAAACAGGGA +
Preference number: 2 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRTRDPT*SVTKQG
Trigger: TCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGT...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR GCA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATCAATTTCACGTCATCTaGCATATAAATAGAACCTAC +
Preference number: 2 (lower is better)
Translates to: PKALQSGLEGPRISLMLHQFHVI*HINRTY
Trigger: GTAGGTTCTATTTATATGGCAGATGACGTGAAATTG...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CAA 90 bp TATATATACAAACACTATATATATATATATATTTTATCCAGTATTTaGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCG +
Preference number: 2 (lower is better)
Translates to: YIYKHYIYIYILSSI*GTWQWSPFRARRNA
Trigger: CGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACTGGATAAAATATATATATATATATAGTGTTTGTATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp CCCCCAGCGACAGGCGCCCGTCGGCCGCTGCGGGGCTaGCCGGGAGCAGGGTCTGGATGTAGAGCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: PPATGARRPLRG*PGAGSGCRARG
Trigger: CCCCCGGGCTCTACATCCAGACCCTGCTCCCGGGCAGCCCCGCAGCGGCCGACGGGCGCCTGTCGCTGGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CAA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCCGCCTGCTGCCCGAGTaGAGACCCCAGCAGGGCACC +
Preference number: 3 (lower is better)
Translates to: RVGRGRGADALHLAVAHTRLLPE*RPQQGT
Trigger: GGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCG...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp TTCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTaGGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGC +
Preference number: 3 (lower is better)
Translates to: FEPGAMRSRTQN*GSAEGAGRTRC
Trigger: GCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp GATACGGTCCCCCAGCGACAGGCGCCCGTCGGCCGCTaGGGGGCTGCCCGGGAGCAGGGTCTGGATGTAGAG +
Preference number: 3 (lower is better)
Translates to: DTVPQRQAPVGR*GAAREQGLDVE
Trigger: CTCTACATCCAGACCCTGCTCCCGGGCAGCCCCGCAGCGGCCGACGGGCGCCTGTCGCTGGGGGACCGTATC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp ACTGCATTCTCCCGTGCCGGTGGCAGGCAGAGGCCATaGGGAGCCCCTGCGGCCCCTCCGAGCAGCCCACGC +
Preference number: 3 (lower is better)
Translates to: TAFSRAGGRQRP*GAPAAPPSSPR
Trigger: GCGTGGGCTGCTCGGAGGGGCCGCAGGGGCTCCCCATGGCCTCTGCCTGCCACCGGCACGGGAGAATGCAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp TCGGGGGCCGAGGACCAGCTCTCACGGCGCTCCGTCTaGAATGGCGGGCACTCCAGGAGTGCCGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SGAEDQLSRRSV*NGGHSRSAGRQ
Trigger: CTGCCTCCCGGCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGAGAGCTGGTCCTCGGCCCCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp GCCCAGCGACCCACGCTGTCACCCCGAGGCAGCAAGTaGCCTGCCCTGGTCCTGCGCATGGTCAGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: AQRPTLSPRGSK*PALVLRMVSQL
Trigger: CAGCTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAGCGTGGGTCGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp GGGGTGCACCTGCAGCTGCCGCAGGAGGTCCAGGGCTaGCTGGTACACAGACACCACGCGGCGCAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: GVHLQLPQEVQG*LVHRHHAAQLL
Trigger: GAGGAGCTGCGCCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGTGCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CAA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGCGCCTGCTGCCCGAGTaGAGACCCCAGCAGGGCACC +
Preference number: 3 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQRLLPE*RPQQGT
Trigger: GGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCG...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCCTGTCGAGGAGCTGGTaGAGAAGCAGTGTCCCGGAG +
Preference number: 3 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTLSRSW*RSSVPE
Trigger: CTCCGGGACACTGCTTCTCAACCAGCTCCTCGACAG...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp GCGACCCACGCTGTCACCCCGAGGCAGCAAGTGCCCTaGCCTGGTCCTGCGCATGGTCAGCCAGCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: ATHAVTPRQQVP*PGPAHGQPAGG
Trigger: TCCACCAGCTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAGCGTGGGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp CCTGATGACAGCTGTCACTGCATTCTCCCGTGCCGGTaGCAGGCAGAGGCCATGGGGAGCCCCTGCGGCCCC +
Preference number: 3 (lower is better)
Translates to: PDDSCHCILPCR*QAEAMGSPCGP
Trigger: GGGGCCGCAGGGGCTCCCCATGGCCTCTGCCTGCCACCGGCACGGGAGAATGCAGTGACAGCTGTCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp GAAGTCCTCGGTGCTGGAGCTGCGGCTGGACGGGGCTaGAGGGGACTCCTCCGCAAGGGCTGCAGAGTCTCC +
Preference number: 3 (lower is better)
Translates to: EVLGAGAAAGRG*RGLLRKGCRVS
Trigger: GGAGACTCTGCAGCCCTTGCGGAGGAGTCCCCTCCAGCCCCGTCCAGCCGCAGCTCCAGCACCGAGGACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CAA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTTCACAGTGTTGTAGATaGTCTGGGGCCTGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: GEGRWPPARVRAGGQGDASQCCR*SGAWLG
Trigger: TCCCAGCCAGGCCCCAGACAATCTACAACACTGTGA...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR TCA 72 bp CGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTaGGACCCCAGCAGGGCACCCTCTAAGAACGGGAAA +
Preference number: 3 (lower is better)
Translates to: RPLRAAHACCPS*DPSRAPSKNGK
Trigger: TTTCCCGTTCTTAGAGGGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp AGTGGCAGCCCTCACCAGTCCCGCACCTCAGCTAGGTaGTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGA +
Preference number: 3 (lower is better)
Translates to: SGSPHQSRTSAR*FSGQRLAGPPR
Trigger: TCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGCTGAGGTGCGGGACTGGTGAGGGCTGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp AGCATCTGCGAGGCCACCTCGGGGTGCACCTGCAGCTaGCGCAGGAGGTCCAGGGCTGCCTGGTACACAGAC +
Preference number: 3 (lower is better)
Translates to: SICEATSGCTCS*RRRSRAAWYTD
Trigger: GTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGTGCACCCCGAGGTGGCCTCGCAGATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp GGCCGAGGACCAGCTCTCACGGCGCTCCGTCTGGAATaGCGGGCACTCCAGGAGTGCCGGGAGGCAGATGTA +
Preference number: 3 (lower is better)
Translates to: GRGPALTALRLE*RALQECREADV
Trigger: TACATCTGCCTCCCGGCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGAGAGCTGGTCCTCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp CAGCTGGTAGTGAGTCAGCAGCCGGTGCAGCTGTGCTaGGCTCAGTGCGGGGAACGCAGCCCGCAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: QLVVSQQPVQLC*AQCGERSPQGC
Trigger: ACAGCCCTGCGGGCTGCGTTCCCCGCACTGAGCCCAGCACAGCTGCACCGGCTGCTGACTCACTACCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp AGACGTAGCAGAAGTCCTCGGTGCTGGAGCTGCGGCTaGACGGGGCTGGAGGGGACTCCTCCGCAAGGGCTG +
Preference number: 3 (lower is better)
Translates to: RRSRSPRCWSCG*TGLEGTPPQGL
Trigger: CAGCCCTTGCGGAGGAGTCCCCTCCAGCCCCGTCCAGCCGCAGCTCCAGCACCGAGGACTTCTGCTACGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCTGTTGGTGGCCACCTTaGGAAATGCCTTGCCACTGT +
Preference number: 3 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGCWWPP*EMPCHC
Trigger: ACAGTGGCAAGGCATTTCCAAAGGTGGCCACCAACA...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR TCA 72 bp TCCCCAGCCCGGAGGGGCCTCGTTCCAGCTCCACCGTaGAGACGTAGCAGAAGTCCTCGGTGCTGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: SPARRGLVPAPP*RRSRSPRCWSC
Trigger: GCAGCTCCAGCACCGAGGACTTCTGCTACGTCTTCACGGTGGAGCTGGAACGAGGCCCCTCCGGGCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp AACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATaGGGAGCCGCACACAGAACTGCGGGTCGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: NLAVVAVSSQAQ*GAAHRTAGRQR
Trigger: CCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCATCAGCCTGGCTATCTaGAGCAGGAGCTGCCCGAAT +
Preference number: 3 (lower is better)
Translates to: RARRNAEPHTELRVGRGRISLAI*SRSCPN
Trigger: ATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGAT...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR TCA 72 bp CAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTaGGTCCGTTCCTCTGCCTCTCTGGGAGCGCTTTTC +
Preference number: 3 (lower is better)
Translates to: QSLLPELHPGGR*VRSSASLGALF
Trigger: GAAAAGCGCTCCCAGAGAGGCAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp GTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTaGCCGAATGTGCCCGGCTGGAAGTGGGTGGCCGAG +
Preference number: 3 (lower is better)
Translates to: VSRISLAILSRS*PNVPGWKWVAE
Trigger: CTCGGCCACCCACTTCCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp GGTCCACAGCTCTCAGGTAGCCAAGGCCCAGGAGGCTaGTGCCATTCACCTCCAGGATACGGTCCCCCAGCG +
Preference number: 3 (lower is better)
Translates to: GPQLSGSQGPGG*CHSPPGYGPPA
Trigger: CGCTGGGGGACCGTATCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCCTTGGCTACCTGAGAGCTGTGGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp GTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTaGTGTCCCCGGGATCACTGGTGGGACTGCATTCGC +
Preference number: 3 (lower is better)
Translates to: VWGLAGKSFCST*CPRDHWWDCIR
Trigger: GCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCCGGAAATGGATCTTCTaGGCTGTTTCCACGTCGGAC +
Preference number: 3 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGARKWIF*AVSTSD
Trigger: GTCCGACGTGGAAACAGCCAAGAAGATCCATTTCCG...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp CCACAGCTCTCAGGTAGCCAAGGCCCAGGAGGCTGCTaGCATTCACCTCCAGGATACGGTCCCCCAGCGACA +
Preference number: 3 (lower is better)
Translates to: PQLSGSQGPGGC*HSPPGYGPPAT
Trigger: TGTCGCTGGGGGACCGTATCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCCTTGGCTACCTGAGAGCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp ACGCTGGTGAGGATTAAGGGCCTGGGGCCGCCAGCCTaGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGA +
Preference number: 3 (lower is better)
Translates to: TLVRIKGLGPPA*YQGHAGGFSRG
Trigger: TCCCCTACTAAAGCCACCAGCGTGGCCCTGATACCAGGCTGGCGGCCCCAGGCCCTTAATCCTCACCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp GCTGGGCCTCCCCGACTCCACGGGGCCTCCCTTCCTTaGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTG +
Preference number: 3 (lower is better)
Translates to: AGPPRLHGASLP*GDAKSFFPWML
Trigger: CAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAGGGAGGCCCCGTGGAGTCGGGGAGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCACCTTTGGAAATGCCTaGCCACTGTCTTTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGATFGNA*PLSFLW
Trigger: CCAGAGGAAAGACAGTGGCAAGGCATTTCCAAAGGT...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCTTCTCTGCTAGTTCTTaGGTTTTCTCCCAGACAGTC +
Preference number: 3 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTFSASS*VFSQTV
Trigger: GACTGTCTGGGAGAAAACCAAAGAACTAGCAGAGAA...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp ACGGCGCTCCGTCTGGAATGGCGGGCACTCCAGGAGTaGCGGGAGGCAGATGTACAGGGACTTGGAGACATA +
Preference number: 3 (lower is better)
Translates to: TALRLEWRALQE*READVQGLGDI
Trigger: TATGTCTCCAAGTCCCTGTACATCTGCCTCCCGGCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR TCA 72 bp TCTCCCAGACAGTCTCGCGGATCAGCCTGGCTATCTTaGGCAGGAGCTGCCCGAATGTGCCCGGCTGGAAGT +
Preference number: 3 (lower is better)
Translates to: SPRQSRGSAWLS*AGAARMCPAGS
Trigger: ACTTCCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTCTGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR GCA 72 bp GATCAGAAGTCCAGCATCCTCTGCCAGGTCTGGCCCTaGTTCAGCTGGGAGGGGCTGTTGGAGCTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: DQKSSILCQVWP*FSWEGLLELLP
Trigger: AGGAAGCAGCTCCAACAGCCCCTCCCAGCTGAAGCAGGGCCAGACCTGGCAGAGGATGCTGGACTTCTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp AGAGCAGGTGCTGGTAGATGCTGTCGTCCAGGCAGTTaGCTTCCAAGTCCACCTGGAAGCCGTCGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: RAGAGRCCRPGS*LPSPPGSRRWA
Trigger: TGCCCAGCGACGGCTTCCAGGTGGACTTGGAAGCCAACTGCCTGGACGACAGCATCTACCAGCACCTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp CCCCCTAGAGAGGGGGCGTGCGGAAATGGATCTTCTTaGCTGTTTCCACGTCGGACTTCGCGACCAGGAACC +
Preference number: 3 (lower is better)
Translates to: PPREGACGNGSS*LFPRRTSRPGT
Trigger: GGTTCCTGGTCGCGAAGTCCGACGTGGAAACAGCCAAGAAGATCCATTTCCGCACGCCCCCTCTCTAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTGCCCTTCAGTCTGGCTaGGAAGGTCCCAGAATATCA +
Preference number: 3 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSALQSG*EGPRIS
Trigger: TGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGC...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp CTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTaGGTGTCTAGACCTTTCTCTGGGGCCTGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: LRDHQAGPLSNA*VSRPFSGACAE
Trigger: CTCAGCACAGGCCCCAGAGAAAGGTCTAGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGACTGAGGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKTEENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCCTCAGT...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCATTATGCTGCATCCTGTaGTTCGGAGCAAGTCAGAAG +
Preference number: 3 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPLCCIL*FGASQK
Trigger: CTTCTGACTTGCTCCGAACAACAGGATGCAGCATAA...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACCCAGGGTTTCTCTGTaGCTATCAAAGATGACCCTG +
Preference number: 3 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGPRVSL*LSKMTL
Trigger: CAGGGTCATCTTTGATAGCAACAGAGAAACCCTGGG...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCCCAGGGTTTCTCTGTaGCTATCAAAGATGACCCTG +
Preference number: 3 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREPRVSL*LSKMTL
Trigger: CAGGGTCATCTTTGATAGCAACAGAGAAACCCTGGG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATTTTATCCAGTATTTaGGGAACCTGGCAGTGGTCG +
Preference number: 3 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGILSSI*GTWQWS
Trigger: CGACCACTGCCAGGTTCCCAAAATACTGGATAAAAT...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR TCA 72 bp CTGAGATGCATGTTATCAACAGGCATGTCCCCAGGGTaGGGCTCCCCACCCGGGACCCAACTTGGTCAGTTA +
Preference number: 3 (lower is better)
Translates to: LRCMLSTGMSPG*GSPPGTQLGQL
Trigger: TAACTGACCAAGTTGGGTCCCGGGTGGGGAGCCTCACCCTGGGGACATGCCTGTTGATAACATGCATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR TCA 72 bp ACAGACCTCTGTCCCAGTGAGAGGTGCATCTGCAACTaGTGCCGGGACCCTCTTCCCCAGGGTTTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: TDLCPSERCICN*CRDPLPQGFSV
Trigger: AACAGAGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGGGACAGAGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp ACAGAAAGTGGCGGACGTAGAGCAGGTGCTGGTAGATaGTGTCGTCCAGGCAGTTGGCTTCCAAGTCCACCT +
Preference number: 3 (lower is better)
Translates to: TESGGRRAGAGR*CRPGSWLPSPP
Trigger: AGGTGGACTTGGAAGCCAACTGCCTGGACGACAGCATCTACCAGCACCTGCTCTACGTCCGCCACTTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp TCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTaGGATCTGCACCAGGTCCAGAAATGCAGACCGTCC +
Preference number: 3 (lower is better)
Translates to: STVKASNQSPGS*DLHQVQKCRPS
Trigger: GGACGGTCTGCATTTCTGGACCTGGTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGCACCCGGGACCCAACTaGGTCAGTTACAAAACAGGG +
Preference number: 3 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKHPGPN*VSYKTG
Trigger: CCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTG...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp TTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTaGACCAGGTCCAGAAATGCAGACCGTCCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: LRHQIRVQDPGI*TRSRNADRPEL
Trigger: CAGCTCTGGACGGTCTGCATTTCTGGACCTGGTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR GCA 72 bp AGCTCGATGGAGTTAGACATCCAGAAAAGAATGGGCTaGAAGTCTGGAACCAGATCAGCCATGGCGCAGCTG +
Preference number: 3 (lower is better)
Translates to: SSMELDIQKRMG*KSGTRSAMAQL
Trigger: CAGCTGCGCCATGGCTGATCTGGTTCCAGACTTGCAGCCCATTCTTTTCTGGATGTCTAACTCCATCGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
3UTR CCA 72 bp GATAAGCCCCCTTCTCTTTGTGGGAGGAACTGTTGGTaGCCACCTTTGGAAATGCCTTGCCACTGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: DKPPSLCGRNCW*PPLEMPCHCLS
Trigger: GGAAAGACAGTGGCAAGGCATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACAAAGAGAAGGGGGCTTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGACTGAGGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKTEENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCCTCAGT...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGGCCCTTCAGTCTGGCTaGGAAGGTCCCAGAATATCA +
Preference number: 3 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKALQSG*EGPRIS
Trigger: TGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGC...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp AGAGATAAGCCCCCTTCTCTTTGTGGGAGGAACTGTTaGTGGCCACCTTTGGAAATGCCTTGCCACTGTCTT +
Preference number: 3 (lower is better)
Translates to: RDKPPSLCGRNC*WPPLEMPCHCL
Trigger: AAGACAGTGGCAAGGCATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACAAAGAGAAGGGGGCTTATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp TCCCTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATaGATGCTGAGTTCCAGGAGCATGAAAATAGAAACC +
Preference number: 3 (lower is better)
Translates to: SLPWGDAKSFFP*MLSSRSMKIET
Trigger: GGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp CATGAAAATAGAAACCAAAGGCCCTTCAGTCTGGCTTaGAAGGTCCCAGAATATCACTTATGCTGCATCCTG +
Preference number: 3 (lower is better)
Translates to: HENRNQRPFSLA*KVPEYHLCCIL
Trigger: CAGGATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGGTTTCTATTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CCA 72 bp AGGAGCATGAAAATAGAAACCAAAGGCCCTTCAGTCTaGCTTGGAAGGTCCCAGAATATCACTTATGCTGCA +
Preference number: 3 (lower is better)
Translates to: RSMKIETKGPSV*LGRSQNITYAA
Trigger: TGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGGTTTCTATTTTCATGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR-3UTR CAA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACATTTTATCCAGTATTTaGGGAACCTGGCAGTGGTCG +
Preference number: 3 (lower is better)
Translates to: CQELLSMDAEFQEHENRNILSSI*GTWQWS
Trigger: CGACCACTGCCAGGTTCCCAAAATACTGGATAAAAT...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGGCCACGTTCCCGCGCTaGTCCCACCCGCCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAATFPR*SHPPLA
Trigger: AGCCAACGGCGGGTGGGAGCAGCGCGGGAACGTGGC...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGCACTCCAGGAGCTGCTaGAGGCGGGCGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAHSRSC*RRAQAW
Trigger: CCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTG...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCCCAGGTGGGACCGGGTaGCGGGCCTGTGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSPGGTG*RACGGV
Trigger: GACACCCCCACAGGCCCGGCACCCGGTCCCACCTGG...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCGCCACGTTCCCGCGCTaGTCCCACCCGCCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSATFPR*SHPPLA
Trigger: AGCCAACGGCGGGTGGGAGCAGCGCGGGAACGTGGC...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCGTCTCCTTCCGGAGCTaGACCCCGGAGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVGRGRGADALHLAVAHTVSFRS*TPEAAE
Trigger: CTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGAC...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTCCAGGGGCCGACAGCTaGGTGGAGAGCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDAPGADS*VESSAG
Trigger: CCCCGCCGAGCTCTCCACCCAGCTGTCGGCCCCTGG...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCGAGTGCTGGGAGGCGTaGGCAAGCAGGACGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RVGRGRGADALHLAVAHTECWEA*ASRTSP
Trigger: CGGACTCGTCCTGCTTGCTCACGCCTCCCAGCACTC...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTCCAGCTCACGGGCGCTaGAGGTGCCGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDAPAHGR*RCRWPG
Trigger: TCCTGGCCACCGGCACCTCCAGCGCCCGTGAGCTGG...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCCCAGCATCGCCGGCTTaGCCCACCACGTCACACAGC +
Preference number: 4 (lower is better)
Translates to: RVGRGRGADALHLAVAHTPASPA*PTTSHS
Trigger: GCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGG...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCGAGAGCAGGTCCCCGTaGTGCAGCACCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RVGRGRGADALHLAVAHTESRSP*CSTTVL
Trigger: CAGGACCGTGGTGCTGCACCACGGGGACCTGCTCTC...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCCCATGGCCTCCTCGCTaGCCGTCAGCGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RVGRGRGADALHLAVAHTPWPPR*PSACRR
Trigger: TCTCCTGCACGCTGACGGCCAGCGAGGAGGCCATGG...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCTCAGGCTGGTCTCACTaGCTGTGCGGCGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSSGWSH*LCGATG
Trigger: CCCGGTTGCGCCGCACAGTCAGTGAGACCAGCCTGA...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCGAGTGCTGGGAGGCGTaGGCAAGCAGGACGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSECWEA*ASRTSP
Trigger: CGGACTCGTCCTGCTTGCTCACGCCTCCCAGCACTC...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCGGCATGTCCCCAGGGTaGGGCTCCCCACCCGGGACC +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRGMSPG*GSPPGT
Trigger: GGTCCCGGGTGGGGAGCCTCACCCTGGGGACATGCC...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTCGCTGGCCCACCGTGTaGCGGTCCCGGTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDARWPTV*RSRLST
Trigger: TGTGCTCAACCGGGACCGGCACACGGTGGGCCAGCG...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCCGGCGGGGTCATCGCTaGCGCCCAGGCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTRRGHR*RPGWRR
Trigger: CCTTCTCCAGCCTGGGCGCCAGCGATGACCCCGCCG...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTGGGCCGACAGCTGGGTaGAGAGCTCGGCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDAGPTAG*RARRGH
Trigger: ATGACCCCGCCGAGCTCTCCACCCAGCTGTCGGCCC...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCTCACGGCGCTCCGTCTaGAATGGCGGGCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSSRRSV*NGGHSR
Trigger: CCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGA...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCGCTCCCAGGTGCTCATaGGGCCCATGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGAPRCS*GPWPRP
Trigger: TGGCCTCGGCCATGGGCCCCATGAGCACCTGGGAGC...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGCCGTCAAGGACCACGTaGTGCATACCCTCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAPSRTT*CIPSGH
Trigger: GTGCCCCGAGGGTATGCACCACGTGGTCCTTGACGG...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCGATGTGGGGAGGCCGTaGCCTCCGGCACAACCCGCC +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRDVGRP*PPAQPA
Trigger: GGCGGGTTGTGCCGGAGGTCACGGCCTCCCCACATC...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCTGCCGGGGCTGGCTCTaGTCCGCAGACCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGCRGWL*SADPTE
Trigger: TTCTGTGGGGTCTGCGGAGCAGAGCCAGCCCCGGCA...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCATTCTCCCGTGCCGGTaGCAGGCAGAGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGILPCR*QAEAMG
Trigger: CCCCATGGCCTCTGCCTGCCACCGGCACGGGAGAAT...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCCCAGGGGGACGCTGGTaGGGATTAAGGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRPGGRW*GLRAWG
Trigger: GCCCCAGGCCCTTAATCCTCACCAGCGTCCCCCTGG...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCCTGTCCGGGAGCGGTTaGCGGCGGATGGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTLSGSG*RRMVQC
Trigger: ACACTGCACCATCCGCCGGCAACCGCTCCCGGACAG...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp TTCACCTCCAGGATACGGTCCCCCAGCGACAGGCGCCCGTCGGCCGCTGCGGGGAGCAGGTCCCCGTGGTaGAGCACCACGGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: FTSRIRSPSDRRPSAAAGSRSPW*STTVLC
Trigger: GCACAGGACCGTGGTGCTGCACCACGGGGACCTGCT...CCCCGCAGCGGCCGACGGGCGCCTGTCGCTGGGGGACCGTATCCTGGAGGTGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCTGGGAGGCCCCACTaGCAGGCCTGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNAGRPH*QACQGC
Trigger: GCAGCCCTGGCAGGCCTGGCAGTGGGGCCTCCCAGC...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCGATGACAGCTGTCACTaGATTCTCCCGTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: RVGRGRGADALHLAVAHTDDSCH*ILPCRW
Trigger: CCACCGGCACGGGAGAATGCAGTGACAGCTGTCATC...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCGCTGGGAAGTCGTTCTaGTCCACGTGGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGAGKSF*STWCPR
Trigger: CCGGGGACACCACGTGGAGCAGAACGACTTCCCAGC...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTCGGGGCTGTCCTaGGCCCCTGGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNASGLS*APGSQV
Trigger: CACCTGGGAGCCAGGGGCCCAGGACAGCCCCGAGGC...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTCCGTCAAGGACCACGTaGTGCATACCCTCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDAPSRTT*CIPSGH
Trigger: GTGCCCCGAGGGTATGCACCACGTGGTCCTTGACGG...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGGCAGGCAGAGGCCATaGGGAGCCCCTGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNGRQRP*GAPAAP
Trigger: AGGGGCCGCAGGGGCTCCCCATGGCCTCTGCCTGCC...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGCCACTGTCTTTCCTCTaGCCACAGTCCACACCCCTC +
Preference number: 4 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAPLSFL*PQSTPL
Trigger: GAGGGGTGTGGACTGTGGCCAGAGGAAAGACAGTGG...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGGCCTGCTGCCCGAGTTaGGACCCCAGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRACCPS*DPSRAP
Trigger: GGGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGC...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp TTCTGGAAGAAGTGCTCTCCAGCCGCCCCGAAGCCGGCGCTCCGCATCCACTCCCGGGCCTGCCACCGCTaGCCAGCATCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FWKKCSPAAPKPALRIHSRACHR*PASPAW
Trigger: CCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCG...GGAGTGGATGCGGAGCGCCGGCTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCATCTTGAGCAGGAGCTaGCCGAATGTGCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGILSRS*PNVPGW
Trigger: CCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGAT...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCTCAAGGACCACGTGGTaGATACCCTCGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSSRTTW*IPSGHT
Trigger: AGTGTGCCCCGAGGGTATGCACCACGTGGTCCTTGA...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp TCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGGTCTCCTTCCGGAGCTaGACCCCGGAGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSQAQCGAAHRTAGRQRAVSFRS*TPEAAE
Trigger: CTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGAC...CGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTTCGAGCCAGGCGCAATaGGGAGCCGCACACAGAACT +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDASSQAQ*GAAHRT
Trigger: AGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCCACCAGGTCCAGAAATaGAGACCGTCCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RVGRGRGADALHLAVAHTHQVQK*RPSRAV
Trigger: CACAGCTCTGGACGGTCTGCATTTCTGGACCTGGTG...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCTTCAGCCAAAGGATGTaGGGAGGCCGTGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGFSQRM*GGRDLR
Trigger: CCGGAGGTCACGGCCTCCCCACATCCTTTGGCTGAA...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGACTGGCCGGCCTGCCTaGGGTCCAGGGCGTACCGCT +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGTGRPA*GPGRTA
Trigger: AGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGT...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAAGCCGGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGCGGTTGCCGGCGGATaGTGCAGTGTAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EAGAPHPLQELLQAGAGLAVAGG*CSVEAG
Trigger: TCCTGCCTCTACACTGCACCATCCGCCGGCAACCGC...CAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCCGGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACTGTGCGCCCCGGGGATaGGCTCCAGGACCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNCAPRG*APGPAS
Trigger: GGAGGCTGGTCCTGGAGCCCATCCCCGGGGCGCACA...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTAGCGTGTCCTCCAGGTaGGGCTCAAACTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDASVSSR*GSNSRS
Trigger: GCTCCTGGAGTTTGAGCCCCACCTGGAGGACACGCT...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCGCGCTCCGTCTGGAATaGCGGGCACTCCAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRALRLE*RALQEC
Trigger: GCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGC...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TTCACCTCCAGGATACGGTCCCCCAGCGACAGGCGCCCGTCGGCCGCTGCGGGGGCTTCCAAGTCCACCTaGAAGCCGTCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FTSRIRSPSDRRPSAAAGASKST*KPSLGR
Trigger: CCTGCCCAGCGACGGCTTCCAGGTGGACTTGGAAGC...CCCCGCAGCGGCCGACGGGCGCCTGTCGCTGGGGGACCGTATCCTGGAGGTGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCGGCTGGACGGGGCTaGAGGGGACTCCTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNAAGRG*RGLLRK
Trigger: CTTGCGGAGGAGTCCCCTCCAGCCCCGTCCAGCCGC...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAAGCCGGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGCTGGGAGGGGCTGTTaGAGCTGCTTCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: EAGAPHPLQELLQAGAGLAGRGC*SCFLQC
Trigger: GCACTGCAGGAAGCAGCTCCAACAGCCCCTCCCAGC...CAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCCGGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp TCCGTTCCTCTGCCTCTCTGGGAGCGCTTTTCCACAGGGGCCGCCGGACTCTGGGATGTGGGGAGGCCGTaGCCTCCGGCACAACCCGCC +
Preference number: 4 (lower is better)
Translates to: SVPLPLWERFSTGAAGLWDVGRP*PPAQPA
Trigger: GGCGGGTTGTGCCGGAGGTCACGGCCTCCCCACATC...CCAGAGTCCGGCGGCCCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCCTCTGGGGCCTGTGCTaGGCAGCGGGATCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRLWGLC*AAGSEV
Trigger: GACTTCTGATCCCGCTGCTCAGCACAGGCCCCAGAG...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACACGGGCGCTGGAGGTaGCGGTGGCCAGGACGCTCT +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTHGRWR*RWPGRS
Trigger: AGAGCGTCCTGGCCACCGGCACCTCCAGCGCCCGTG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCGGGGGCGCCCAGGTaGGTGTGCATCCCGTCGATC +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPGAPR*VCIPSI
Trigger: GATCGACGGGATGCACACGCACCTGGGCGCCCCCGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCTCGAGCCAGGCGCAATaGGGAGCCGCACACAGAACT +
Preference number: 4 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTSSQAQ*GAAHRT
Trigger: AGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGGGCCGACAGCTGGGTaGAGAGCTCGGCGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNGPTAG*RARRGH
Trigger: ATGACCCCGCCGAGCTCTCCACCCAGCTGTCGGCCC...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCCGCTGGAGGTGCCGGTaGCCAGGACGCTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRRWRCR*PGRSCS
Trigger: ACTACAAGAGCGTCCTGGCCACCGGCACCTCCAGCG...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAACTGGCCGGCCTGCCTaGGGTCCAGGGCGTACCGCT +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTTGRPA*GPGRTA
Trigger: AGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGT...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAGCGGCGCAACCGGGGTaGAGGAGAGCTCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPAAQPG*RRAPGI
Trigger: GATGCCCGGAGCTCTCCTCCACCCCGGTTGCGCCGC...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACATGTGCGCCCCGGGGATaGGCTCCAGGACCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTCAPRG*APGPAS
Trigger: GGAGGCTGGTCCTGGAGCCCATCCCCGGGGCGCACA...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGCAGGGCTGCCGGGGCTaGCTCTGCTCCGCAGACCCC +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGQGCRG*LCSADP
Trigger: GGGGTCTGCGGAGCAGAGCCAGCCCCGGCAGCCCTG...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTGGAGCGGGGGCGTGCGGAAATaGATCTTCTTGGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RGGRAAPRRSAHQGAAWSGGVRK*IFLAVS
Trigger: GGAAACAGCCAAGAAGATCCATTTCCGCACGCCCCC...GCTCCACGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCCAGTGTCACCAGGTaGGACCGGGTGCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPSVTR*DRVPGL
Trigger: CAGGCCCGGCACCCGGTCCCACCTGGTGACACTGGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCAGGGAGCAGGAGTCCTaGGAGAGGAAGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGAREQES*ERKQGP
Trigger: TGGGCCCTGCTTCCTCTCCCAGGACTCCTGCTCCCT...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGCTGGGGCCGCCAGCCTaGTATCAGGGCCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRLGPPA*YQGHAG
Trigger: ACCAGCGTGGCCCTGATACCAGGCTGGCGGCCCCAG...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp TCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGGCAAGTGCCCTGCCCTaGTCCTGCGCATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSQAQCGAAHRTAGRQRAASALP*SCAWSA
Trigger: GGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGC...CGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCGACCAGAACAGCCAGTaGCAGCCCTCACCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGADQNSQ*QPSPVP
Trigger: CGGGACTGGTGAGGGCTGCCACTGGCTGTTCTGGTC...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAAGCCGGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGCCCCGGGATCACTGGTaGGACTGCATTCGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EAGAPHPLQELLQAGAGLPRDHW*DCIRLE
Trigger: TTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGG...CAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCCGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTCAGGCTGGTCTCACTaGCTGTGCGGCGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGSGWSH*LCGATG
Trigger: CCCGGTTGCGCCGCACAGTCAGTGAGACCAGCCTGA...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGCGGGCCTGCCACCGCTaGCCAGCATCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKRACHR*PASPAW
Trigger: CCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCG...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGCTGTCCGGGAGCGGTTaGCGGCGGATGGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGLSGSG*RRMVQC
Trigger: ACACTGCACCATCCGCCGGCAACCGCTCCCGGACAG...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCATCTTGAGCAGGAGCTaGCCGAATGTGCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGAILSRS*PNVPGW
Trigger: CCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGAT...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGTCCTGGAGTTGCGCCTaGTTCTCTGCTAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RARGGRAAPRRSAHQGAASWSCA*FSASSL
Trigger: CAAAGAACTAGCAGAGAAGCAGGCGCAACTCCAGGA...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAGGGTGCACCTGCAGCTaGCGCAGGAGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPGCTCS*RRRSRA
Trigger: AGCCCTGGACCTCCTGCGGCAGCTGCAGGTGCACCC...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAATCCACTCCAGGAGCTaGTGCAGGCGGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPIHSRS*CRRAQA
Trigger: GGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGAT...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTCCCCGAGGCAGCAAGTaGCCTGCCCTGGTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSPRGSK*PALVLR
Trigger: GCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGG...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACTCACACAGCACGTACTaGCCGGCCTGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNSHSTY*PACLGS
Trigger: GGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGA...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAACAGCGAGTACCGCATaGCGTCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPTASTA*RRGRAP
Trigger: AGGAGCCCGGCCCCGACGCCATGCGGTACTCGCTGT...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGGAGAGCAGGTCCCCGTaGTGCAGCACCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQESRSP*CSTTVL
Trigger: CAGGACCGTGGTGCTGCACCACGGGGACCTGCTCTC...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGCCATGGCCTCCTCGCTaGCCGTCAGCGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQPWPPR*PSACRR
Trigger: TCTCCTGCACGCTGACGGCCAGCGAGGAGGCCATGG...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCAGCCTCGGGGCTGTCCTaGGCCCCTGGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTAASGLS*APGSQV
Trigger: CACCTGGGAGCCAGGGGCCCAGGACAGCCCCGAGGC...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCTGGAAGCCGTCGCTaGGCAGGACGATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPGSRR*AGRWVG
Trigger: CCCCACCCATCGTCCTGCCCAGCGACGGCTTCCAGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGATTCTCCCGTGCCGGTaGCAGGCAGAGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQILPCR*QAEAMG
Trigger: CCCCATGGCCTCTGCCTGCCACCGGCACGGGAGAAT...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGCCCAGGACACCGATCTaGGGACCCCGCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQPRTPI*GPRTDL
Trigger: GAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGG...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGCAGGATGTCGGGGGCTaGGAGGCTGATGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRQDVGG*EADAGL
Trigger: AAGCCCAGCATCAGCCTCTCAGCCCCCGACATCCTG...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACCTCTGGGGCCTGTGCTaGGCAGCGGGATCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNLWGLC*AAGSEV
Trigger: GACTTCTGATCCCGCTGCTCAGCACAGGCCCCAGAG...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGCACTTGATGTCAGTTTaGAATCAGCCTGGCCAACGT +
Preference number: 4 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAHLMSV*NQPGQR
Trigger: ACGTTGGCCAGGCTGATTTCAAACTGACATCAAGTG...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCGACCGTCCAGAGCTGTaGGACATTCTCGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGADRPEL*DILGSA
Trigger: AGCACTGCCGAGAATGTCTCACAGCTCTGGACGGTC...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCCTCCCTTCCTTGGGGTaGTGCCAAGAGCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTLPSLG*CQELLS
Trigger: GGAAAGAAGCTCTTGGCATCACCCCAAGGAAGGGAG...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCTCTGCCGCTTCAGTTTaGTCTTGGTGGGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRSAASV*SWWAGT
Trigger: TGTCCCCGCCCACCAAGAGCAAACTGAAGCGGCAGA...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGCGAAAGCACCGGGCCTaGCACCGCTGCCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGRKHRA*HRCPAS
Trigger: CGATGCTGGGCAGCGGTGGCAGGCCCGGTGCTTTCG...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGGTCCACCTCCTTGGCTaGCAGCTCCTCCACGTCCGA +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRVHLLG*QLLHVR
Trigger: TCGGACGTGGAGGAGCTGGCAGCCAAGGAGGTGGAC...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCTTCGCGCGACTCCGCTaGAGCCTCCGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSFARLR*SLRAWA
Trigger: CGCCCAGGCCCGGAGGCTGCAGCGGAGTCGCGCGAA...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGAGCAGGTCCCCGTGGTaGAGCACCACGGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQSRSPW*STTVLC
Trigger: GCACAGGACCGTGGTGCTGCACCACGGGGACCTGCT...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCACACTCCAGGAGCTGCTaGAGGCGGGCGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTAHSRSC*RRAQAW
Trigger: CCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTG...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCATGCCAGGTCTGGCCCTaGTTCAGCTGGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPCQVWP*FSWEGL
Trigger: CAGCCCCTCCCAGCTGAAGCAGGGCCAGACCTGGCA...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCCAGGGGCCGACAGCTaGGTGGAGAGCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREPGADS*VESSAG
Trigger: CCCCGCCGAGCTCTCCACCCAGCTGTCGGCCCCTGG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTTCACACAGCACGTACTaGCCGGCCTGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLGASETIRPVHFPTPGCSHSTY*PACLGS
Trigger: GGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGA...ACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGGGGCAGGGCGTTCACTaGGCTCAGGCTGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGGQGVH*AQAGLT
Trigger: AGTGAGACCAGCCTGAGCCCAGTGAACGCCCTGCCC...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGGGCAGGGCGTTCACTaGGCTCAGGCTGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNGQGVH*AQAGLT
Trigger: AGTGAGACCAGCCTGAGCCCAGTGAACGCCCTGCCC...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACTGGAGGGGGTCCGCTaGCCCACCGTGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGLEGVR*PTVCRS
Trigger: GGACCGGCACACGGTGGGCCAGCGGACCCCCTCCAG...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACAGGCTCAGGGCCAAGTaGAGTGCTGGGAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNRLRAK*SAGRRE
Trigger: CTCACGCCTCCCAGCACTCCACTTGGCCCTGAGCCT...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTAAGCAGGGCCCAGGGTaGGCTCGGCGCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSKQGPG*ARRLRD
Trigger: GTCTCTGAGGCGCCGAGCCCACCCTGGGCCCTGCTT...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGGCAAGTGCCCTGCCCTaGTCCTGCGCATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQASALP*SCAWSA
Trigger: GGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGC...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACACGGGCGCTGGAGGTaGCGGTGGCCAGGACGCTCT +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGHGRWR*RWPGRS
Trigger: AGAGCGTCCTGGCCACCGGCACCTCCAGCGCCCGTG...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGAGCACCACGGTCCTGTaGCCCACCTCGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGSTTVL*PTSEKL
Trigger: CAACTTCTCCGAGGTGGGGCACAGGACCGTGGTGCT...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGAGCACCACGGTCCTGTaGCCCACCTCGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRSTTVL*PTSEKL
Trigger: CAACTTCTCCGAGGTGGGGCACAGGACCGTGGTGCT...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCAACTCCAGGAGCAGCTaGTGGCGCCGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSNSRSS*WRRGRA
Trigger: CGCCCTGCCCCGGCGCCAGCAGCTGCTCCTGGAGTT...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTGCTGGGAGGCCCCACTaGCAGGCCTGCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTAGRPH*QACQGC
Trigger: GCAGCCCTGGCAGGCCTGGCAGTGGGGCCTCCCAGC...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGCTCGGGGCCTCCAGGTaGCCGTCAAGGACCACGTGG +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGLGASR*PSRTTW
Trigger: CCACGTGGTCCTTGACGGGCACCTGGAGGCCCCGAG...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGGGCCCAGGAGGCTGCTaGCATTCACCTCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRGPGGC*HSPPGY
Trigger: GTATCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCC...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGGCCCTGCCCTGGTCCTaGGCATGGTCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGALPWS*AWSASW
Trigger: CCAGCTGGCTGACCATGCGCAGGACCAGGGCAGGGC...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGTCCGGGACAGCATGCTaGACAACAGCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRSGTAC*TTAGSA
Trigger: GGCAGAGCCAGCTGTTGTCCAGCATGCTGTCCCGGA...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGCCAGGCTGGAGAAGGTaGAGTCCAGGTCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRPGWRR*SPGPGT
Trigger: AGTACCGGGACCTGGACTCCACCTTCTCCAGCCTGG...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGCGCTGGAGGTGCCGGTaGCCAGGACGCTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQRWRCR*PGRSCS
Trigger: ACTACAAGAGCGTCCTGGCCACCGGCACCTCCAGCG...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGCGGCGCAACCGGGGTaGAGGAGAGCTCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREAAQPG*RRAPGI
Trigger: GATGCCCGGAGCTCTCCTCCACCCCGGTTGCGCCGC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACAGCGAGTACCGCATaGCGTCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGTASTA*RRGRAP
Trigger: AGGAGCCCGGCCCCGACGCCATGCGGTACTCGCTGT...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCTGGAGGGGGTCCGCTaGCCCACCGTGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAELEGVR*PTVCRS
Trigger: GGACCGGCACACGGTGGGCCAGCGGACCCCCTCCAG...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCGGCTGGAAGTGGGTaGCCGAGTGCTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPAGSG*PSAGCR
Trigger: TCTGCATCCAGCACTCGGCCACCCACTTCCAGCCGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGGAACCAGATCAGCCATaGCGCAGCTGGCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTREPDQP*RSWPAR
Trigger: TCTCGCTGGCCAGCTGCGCCATGGCTGATCTGGTTC...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp TTCTGGAAGAAGTGCTCTCCAGCCGCCCCGAAGCCGGCGCTCCGCATCCACTCCAGGTCCAGGGCTGCCTaGTACACAGACACCACGCGG +
Preference number: 4 (lower is better)
Translates to: FWKKCSPAAPKPALRIHSRSRAA*YTDTTR
Trigger: CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCT...GGAGTGGATGCGGAGCGCCGGCTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCAGCTCCCAGGTGCTCATaGGGCCCATGGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTAAPRCS*GPWPRP
Trigger: TGGCCTCGGCCATGGGCCCCATGAGCACCTGGGAGC...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGTCGGGGCACACTGGCTaGGAGGCCCCACTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRESGHTG*EAPLPG
Trigger: GCCTGGCAGTGGGGCCTCCCAGCCAGTGTGCCCCGA...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAGCTGGGAGGGGCTGTTaGAGCTGCTTCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPAGRGC*SCFLQC
Trigger: GCACTGCAGGAAGCAGCTCCAACAGCCCCTCCCAGC...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGTGGTCAGCCAGCTGGTaGAGAGGGACGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGWSASW*RGTLAS
Trigger: GGAGGCCAGCGTCCCTCTCCACCAGCTGGCTGACCA...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACTTGGGAACCTGGCAGTaGTCGCCGTTTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNLGTWQ*SPFRAR
Trigger: CCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAA...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGGGGGCCTCCCTTCCTTaGGGTGATGCCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRGASLP*GDAKSF
Trigger: GAAGCTCTTGGCATCACCCCAAGGAAGGGAGGCCCC...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCAGATTGTCTGGGGCCTaGCTGGGAAGTCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRRLSGA*LGSRSA
Trigger: AGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGCCTGCGCGGGGTCCTTaGATAGCAGCAGGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQPARGP*IAAGSR
Trigger: TCTACTACCTGCTGCTATTCAAGGACCCCGCGCAGG...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGCCCAGGGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACTGTCGAGGAGCTGGTTaGGAAGCAGTGTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GPGWARRLRDHQAGPLSNCRGAG*EAVSRR
Trigger: TCTCCGGGACACTGCTTCTCAACCAGCTCCTCGACA...GTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACCCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGGAACATCCTCTGACCTaGAGGCCTCGGGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQEHPLT*RPRGCP
Trigger: AGGACAGCCCCGAGGCCTTCAGGTCAGAGGATGTTC...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACACCCCGGAGGCCGCTaGGTCCGTTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGHPGGR*VRSSAS
Trigger: AGAGGCAGAGGAACGGACTCAGCGGCCTCCGGGGTG...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCCAGGGGGACGCTGGTaGGGATTAAGGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREPGGRW*GLRAWG
Trigger: GCCCCAGGCCCTTAATCCTCACCAGCGTCCCCCTGG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGACGTACTGGCCGGCCTaGCTGGGGTCCAGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRETYWPA*LGSRAY
Trigger: GTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGT...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGGTTGCCGGCGGATGGTaGAGTGTAGAGGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQVAGGW*SVEAGC
Trigger: ACATCCTGCCTCTACACTGCACCATCCGCCGGCAAC...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGCGCTGGCCGTCAGCGTaGAGGAGAACAGCGATTCCT +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQRWPSA*RRTAIP
Trigger: AGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCG...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTCCTCGCTGGCCGTCAGCGTGCAGGAGAACAGCGATTCCTTCGAGCCTGTGATCTGTGCTGGGCTCAGTaGGGGGAACGCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LLAGRQRAGEQRFLRACDLCWAQ*GERSPQ
Trigger: CTGCGGGCTGCGTTCCCCGCACTGAGCCCAGCACAG...ATCACAGGCTCGAAGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp CGGGAGGCAGATGTACAGGGACTTGGAGACATAGTAGACGCACTGCTGGAAGGCGGCCACTTCCCGGGCTaGTGGGCCAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: READVQGLGDIVDALLEGGHFPG*WARVPG
Trigger: CCCAGGGACCCTGGCCCAGCAGCCCGGGAAGTGGCC...GCCTTCCAGCAGTGCGTCTACTATGTCTCCAAGTCCCTGTACATCTGCCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCGCCCTGCCCTGGTCCTaGGCATGGTCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSALPWS*AWSASW
Trigger: CCAGCTGGCTGACCATGCGCAGGACCAGGGCAGGGC...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCAGTGCCCGGCTGGAAGTaGGTGGCCGAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTAVPGWK*VAECWM
Trigger: CATCCAGCACTCGGCCACCCACTTCCAGCCGGGCAC...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGGCGCTCCGTCTGGAATaGCGGGCACTCCAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKALRLE*RALQEC
Trigger: GCACTCCTGGAGTGCCCGCCATTCCAGACGGAGCGC...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCACCCCTGTCGAGGAGCTaGTTGAGAAGCAGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPPLSRS*LRSSVP
Trigger: CGGGACACTGCTTCTCAACCAGCTCCTCGACAGGGG...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTCTCATCTGGATGAGCTaGGCCCTGGGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSLIWMS*ALGVAS
Trigger: GCTGGCCACACCCAGGGCCCAGCTCATCCAGATGAG...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCAAGAAGTCCTCGGTGCTaGAGCTGCGGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTARSPRC*SCGWTG
Trigger: CCCCGTCCAGCCGCAGCTCCAGCACCGAGGACTTCT...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTGGAAATGGATCTTCTTaGCTGTTTCCACGTCGGACT +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDAGNGSS*LFPRRT
Trigger: AGTCCGACGTGGAAACAGCCAAGAAGATCCATTTCC...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGAAGCAGGGCCCAGGGTaGGCTCGGCGCCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREKQGPG*ARRLRD
Trigger: GTCTCTGAGGCGCCGAGCCCACCCTGGGCCCTGCTT...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGCCCAGGACACCGATCTaGGGACCCCGCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGPRTPI*GPRTDL
Trigger: GAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGG...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTTGTGCCGGTCCCGGTTaGGCACATACACCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSCAGPG*AHTPGC
Trigger: ACAGCCTGGTGTATGTGCTCAACCGGGACCGGCACA...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399583.4
CDS-3UTR TCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGCCTGCGCGGGGTCCTTaGATAGCAGCAGGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQPARGP*IAAGSR
Trigger: TCTACTACCTGCTGCTATTCAAGGACCCCGCGCAGG...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGGAACATCCTCTGACCTaGAGGCCTCGGGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGEHPLT*RPRGCP
Trigger: AGGACAGCCCCGAGGCCTTCAGGTCAGAGGATGTTC...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTCACCCCGGAGGCCGCTaGGTCCGTTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTHPGGR*VRSSAS
Trigger: AGAGGCAGAGGAACGGACTCAGCGGCCTCCGGGGTG...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGATCTTCTTCCCGCCATaGCGGATCAGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQIFFPP*RIRSTA
Trigger: AGCTGTGGACCTGATCCGTCATGGCGGGAAGAAGAT...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp TCCGTTCCTCTGCCTCTCTGGGAGCGCTTTTCCACAGGGGCCGCCGGACTCTGGGACCGTCCAGAGCTGTaGGACATTCTCGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SVPLPLWERFSTGAAGLWDRPEL*DILGSA
Trigger: AGCACTGCCGAGAATGTCTCACAGCTCTGGACGGTC...CCAGAGTCCGGCGGCCCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGTGTGCCGGTCCCGGTTaGGCACATACACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGCAGPG*AHTPGC
Trigger: GCACCCTGGTGTATGTGCTCAACCGGGACCGGCACA...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTACGTACTGGCCGGCCTaGCTGGGGTCCAGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTTYWPA*LGSRAY
Trigger: GTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGT...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACCACAGCCGGCAGCTCTaGGGCACAGCCCGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHHSRQL*GTARRR
Trigger: GCGCCTCCGGGCTGTGCCGCAGAGCTGCCGGCTGTG...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCACACAGCCGGCAGCTCTaGGGCACAGCCCGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSHSRQL*GTARRR
Trigger: GCGCCTCCGGGCTGTGCCGCAGAGCTGCCGGCTGTG...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGAACTCCAGGAGCAGCTaGTGGCGCCGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVNSRSS*WRRGRA
Trigger: CGCCCTGCCCCGGCGCCAGCAGCTGCTCCTGGAGTT...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGAACGTCATGATCCTCTaGAGCAGCGTGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQNVMIL*SSVSSR
Trigger: CCTGGAGGACACGCTGCTGCAGAGGATCATGACGTT...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGATGGGCTCCTGGAGTTaGGCCTGCTTCTCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGMGSWS*ACFSAS
Trigger: ACTAGCAGAGAAGCAGGCGCAACTCCAGGAGCCCAT...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTACCTCGGGGTGCACCTaGAGCTGCCGCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTTSGCT*SCRRRS
Trigger: GGACCTCCTGCGGCAGCTGCAGGTGCACCCCGAGGT...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGAGCTTCTGGAAGAAGTaGTCTCCAGCCGCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQSFWKK*SPAAPK
Trigger: CTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAAGCT...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp TCCGTTCCTCTGCCTCTCTGGGAGCGCTTTTCCACAGGGGCCGCCGGACTCTGGTCAAGGACCACGTGGTaGATACCCTCGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: SVPLPLWERFSTGAAGLWSRTTW*IPSGHT
Trigger: AGTGTGCCCCGAGGGTATGCACCACGTGGTCCTTGA...CCAGAGTCCGGCGGCCCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCACTGCATTCTCCCGTaGCGGTGGCAGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREHCILP*RWQAEA
Trigger: GGCCTCTGCCTGCCACCGGCACGGGAGAATGCAGTG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGTTCAGCCAAAGGATGTaGGGAGGCCGTGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGFSQRM*GGRDLR
Trigger: CCGGAGGTCACGGCCTCCCCACATCCTTTGGCTGAA...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGCCAGGCTGGAGAAGGTaGAGTCCAGGTCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGPGWRR*SPGPGT
Trigger: AGTACCGGGACCTGGACTCCACCTTCTCCAGCCTGG...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACCAGCATCGCCGGCTTaGCCCACCACGTCACACAGC +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGPASPA*PTTSHS
Trigger: GCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGG...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAAGCAGATGCGGGGACTaGTACAGCGAGTACCGCATG +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTSRCGD*YSEYRM
Trigger: CATGCGGTACTCGCTGTACCAGTCCCCGCATCTGCT...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGTGCCCGGCTGGAAGTaGGTGGCCGAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREVPGWK*VAECWM
Trigger: CATCCAGCACTCGGCCACCCACTTCCAGCCGGGCAC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTAGATGTACAGGGACTTaGAGACATAGTAGACGCACT +
Preference number: 4 (lower is better)
Translates to: GEGRWPPARVRAGGQGDARCTGT*RHSRRT
Trigger: AGTGCGTCTACTATGTCTCCAAGTCCCTGTACATCT...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCTCACGGCGCTCCGTCTaGAATGGCGGGCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSSRRSV*NGGHSR
Trigger: CCTGGAGTGCCCGCCATTCCAGACGGAGCGCCGTGA...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCACTCATCTGGATGAGCTaGGCCCTGGGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTALIWMS*ALGVAS
Trigger: GCTGGCCACACCCAGGGCCCAGCTCATCCAGATGAG...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGGCTGTCCAGCTCATCTaGATGAGCTGGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGAVQLI*MSWALG
Trigger: ACCCAGGGCCCAGCTCATCCAGATGAGCTGGACAGC...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGGCTTCCAAGTCCACCTaGAAGCCGTCGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKASKST*KPSLGR
Trigger: CCTGCCCAGCGACGGCTTCCAGGTGGACTTGGAAGC...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGGGAGGCAGATGTACAGGGACTTGGAGACATAGTAGACGCACTGCTGGAAGGCGCGGCTGGACGGGGCTaGAGGGGACTCCTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: READVQGLGDIVDALLEGAAGRG*RGLLRK
Trigger: CTTGCGGAGGAGTCCCCTCCAGCCCCGTCCAGCCGC...GCCTTCCAGCAGTGCGTCTACTATGTCTCCAAGTCCCTGTACATCTGCCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGGGGGGCGTGCGGAAATaGATCTTCTTGGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGGGVRK*IFLAVS
Trigger: GGAAACAGCCAAGAAGATCCATTTCCGCACGCCCCC...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCAAAGGCCCTTCAGTCTaGCTTGGAAGGTCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGAKGPSV*LGRSQN
Trigger: ATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTT...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGTGTCTGGGGCCTGGCTaGGAAGTCGTTCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGCLGPG*EVVLLH
Trigger: GTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACA...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGTCCAGCTCATCTGGATaGGCTGGGCCCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRESSSSG*AGPWVW
Trigger: CCACACCCAGGGCCCAGCTCATCCAGATGAGCTGGA...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTTGCTATCAAAGATaGCCCTGGGCCACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGCCYQR*PWATSS
Trigger: GGAACTGGTGGCCCAGGGTCATCTTTGATAGCAACA...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp TCCGTTCCTCTGCCTCTCTGGGAGCGCTTTTCCACAGGGGCCGCCGGACTCTGGAGACCTCTGTCCCAGTaGGAGGTGCATCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: SVPLPLWERFSTGAAGLWRPLSQ*EVHLQL
Trigger: CAGTTGCAGATGCACCTCTCACTGGGACAGAGGTCT...CCAGAGTCCGGCGGCCCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCTTCGCGCGACTCCGCTaGAGCCTCCGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSFARLR*SLRAWA
Trigger: CGCCCAGGCCCGGAGGCTGCAGCGGAGTCGCGCGAA...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGCGCTGGCCGTCAGCGTaGAGGAGAACAGCGATTCCT +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGRWPSA*RRTAIP
Trigger: AGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCG...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGCTGTGCTGGGCTCAGTaGGGGGAACGCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVLCWAQ*GERSPQ
Trigger: CTGCGGGCTGCGTTCCCCGCACTGAGCCCAGCACAG...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTGAGTCCGTTCCTCTaGCTCTCTGGGAGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLGASETIRPVHFPTPGCLSPFL*LSGSAF
Trigger: AAAAGCGCTCCCAGAGAGGCAGAGGAACGGACTCAG...ACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACTGAGTCCGTTCCTCTaGCTCTCTGGGAGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTLSPFL*LSGSAF
Trigger: AAAAGCGCTCCCAGAGAGGCAGAGGAACGGACTCAG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCAGCAGAAGTCCTCGGTaGTGGAGCTGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSSRSPR*WSCGWT
Trigger: CGTCCAGCCGCAGCTCCAGCACCGAGGACTTCTGCT...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCTAGAGAGGGGGCGTaGGGAAATGGATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPREGA*GNGSSW
Trigger: CCAAGAAGATCCATTTCCGCACGCCCCCTCTCTAGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGTGCCAGGTCTGGCCCTaGTTCAGCTGGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAECQVWP*FSWEGL
Trigger: CAGCCCCTCCCAGCTGAAGCAGGGCCAGACCTGGCA...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTGCCCGAATGTGCCGCTGGGAAGTCGTTCTaGTCCACGTGGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: DSLADQPGYLEQELPECAAGKSF*STWCPR
Trigger: CCGGGGACACCACGTGGAGCAGAACGACTTCCCAGC...GGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGATGCTGGACAACAGCTaGCTCTGCCGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGMLDNS*LCRFSL
Trigger: CAAACTGAAGCGGCAGAGCCAGCTGTTGTCCAGCAT...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACCCCAGTGTCACCAGGTaGGACCGGGTGCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHPSVTR*DRVPGL
Trigger: CAGGCCCGGCACCCGGTCCCACCTGGTGACACTGGG...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGACCCGGGACCCAACTTaGTCAGTTACAAAACAGGGA +
Preference number: 4 (lower is better)
Translates to: SSQAQCGAAHRTAGRQRATRDPT*SVTKQG
Trigger: TCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGT...CGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAAGAAGAAGAGGTAGGCGAGCATCTGCGAGGCCACCTCGGGGTGCACCTGCAGTTGGGAACCTGGCAGTaGTCGCCGTTTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EEEEVGEHLRGHLGVHLQLGTWQ*SPFRAR
Trigger: CCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAA...CTGCAGGTGCACCCCGAGGTGGCCTCGCAGATGCTCGCCTACCTCTTCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGGGGGCCTCCCTTCCTTaGGGTGATGCCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGGASLP*GDAKSF
Trigger: GAAGCTCTTGGCATCACCCCAAGGAAGGGAGGCCCC...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCATGTCTGGGGCCTGGCTaGGAAGTCGTTCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTACLGPG*EVVLLH
Trigger: GTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACA...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTGAGTCCGTTCCTCTGAGATTGTCTGGGGCCTaGCTGGGAAGTCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CRVSFRSCTPEAAESVPLRLSGA*LGSRSA
Trigger: AGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT...CAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCAGGATGTCGGGGGCTaGGAGGCTGATGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAEQDVGG*EADAGL
Trigger: AAGCCCAGCATCAGCCTCTCAGCCCCCGACATCCTG...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGTGTGGCCAGCAGGTTaGGGGTGCAGGAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGVWPAG*GCRRAS
Trigger: AGAAGCTCTCCTGCACCCTCAACCTGCTGGCCACAC...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGTCCAGCTCATCTGGATaGGCTGGGCCCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAESSSSG*AGPWVW
Trigger: CCACACCCAGGGCCCAGCTCATCCAGATGAGCTGGA...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACTCCAGAACATCCTCTaGCCTGAAGGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGLQNIL*PEGLGA
Trigger: AGCCCCGAGGCCTTCAGGTCAGAGGATGTTCTGGAG...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CCAGTGAGAGGTGCATCTGCAACTGATGCCGGGACCCTCTTCCCCAGGGTTTCTAGTTGGTGGAGCTGCTaGGGATGCCCAGCGACCCAC +
Preference number: 4 (lower is better)
Translates to: PVRGASATDAGTLFPRVSSWWSC*GCPATH
Trigger: GTGGGTCGCTGGGCATCCTCAGCAGCTCCACCAACT...AGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTCTAGACCTCTGTCCCAGTaGGAGGTGCATCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: ARRLRDHQAGPLSNAWVSRPLSQ*EVHLQL
Trigger: CAGTTGCAGATGCACCTCTCACTGGGACAGAGGTCT...AGACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp TCCGTTCCTCTGCCTCTCTGGGAGCGCTTTTCCACAGGGGCCGCCGGACTCTGGCTGAGGAGAATTGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SVPLPLWERFSTGAAGLWLRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCAATTCTCCTCAG...CCAGAGTCCGGCGGCCCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTAGTGGGTTCCTGTaGAGACACTGTCCCCAAACA +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGCSGFL*RHCPQT
Trigger: TGTTTGGGGACAGTGTCTGCACAGGAACCCACTACA...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACACCTCGGGGTGCACCTaGAGCTGCCGCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHTSGCT*SCRRRS
Trigger: GGACCTCCTGCGGCAGCTGCAGGTGCACCCCGAGGT...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGGCAGGTGCTGGTAGATaGTGTCGTCCAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKAGAGR*CRPGSW
Trigger: CCAACTGCCTGGACGACAGCATCTACCAGCACCTGC...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGGGCCACTTCCCGGGCTaGTGGGCCAGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKGHFPG*WARVPG
Trigger: CCCAGGGACCCTGGCCCAGCAGCCCGGGAAGTGGCC...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTAGCAGAAGTCCTCGGTaGTGGAGCTGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTSRSPR*WSCGWT
Trigger: CGTCCAGCCGCAGCTCCAGCACCGAGGACTTCTGCT...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCAAGGCCCAGGAGGCTaGTGCCATTCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREQGPGG*CHSPPG
Trigger: TCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCCTTG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGCAATTTCACGTCATCTaGCATATAAATAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: RARGGRAAPRRSAHQGAAQFHVI*HINRTY
Trigger: GTAGGTTCTATTTATATGGCAGATGACGTGAAATTG...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGGATGACAGCTGTCACTaGATTCTCCCGTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGDDSCH*ILPCRW
Trigger: CCACCGGCACGGGAGAATGCAGTGACAGCTGTCATC...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGGCGTCCCATAAAACATaGTGGGTGAGGCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQASHKT*WVRLHG
Trigger: TCCATGAAGCCTCACCCACCATGTTTTATGGGACGC...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCGGTTTCCATAATTCCTaGATCAAGAGGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGAGFHNS*IKRGFS
Trigger: TGAGAAGCCCCTCTTGATCCAGGAATTATGGAAACC...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCAGTGAGAGGTGCATCTGCAACTGATGCCGGGACCCTCTTCCCCAGGGTTTCTGCGGTTGCCGGCGGATaGTGCAGTGTAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PVRGASATDAGTLFPRVSAVAGG*CSVEAG
Trigger: TCCTGCCTCTACACTGCACCATCCGCCGGCAACCGC...AGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCAGCGTGTCCTCCAGGTaGGGCTCAAACTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSSVSSR*GSNSRS
Trigger: GCTCCTGGAGTTTGAGCCCCACCTGGAGGACACGCT...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGCCGAATGTGCCCGGCTaGAAGTGGGTGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVPNVPG*KWVAEC
Trigger: GCACTCGGCCACCCACTTCCAGCCGGGCACATTCGG...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAACCAGATCAGCCATaGCGCAGCTGGCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREEPDQP*RSWPAR
Trigger: TCTCGCTGGCCAGCTGCGCCATGGCTGATCTGGTTC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGAATGGGCTGCAAGTCTaGAACCAGATCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQNGLQV*NQISHG
Trigger: GCCATGGCTGATCTGGTTCCAGACTTGCAGCCCATT...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGCACATCCAGAAAAGAATaGGCTGCAAGTCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: RARRNAEPHTELRVGRGRTSRKE*AASLEP
Trigger: TGGTTCCAGACTTGCAGCCCATTCTTTTCTGGATGT...GCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCCCCTGTCGAGGAGCTaGTTGAGAAGCAGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREPLSRS*LRSSVP
Trigger: CGGGACACTGCTTCTCAACCAGCTCCTCGACAGGGG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGGTGCAGGAGAGCTTCTaGAAGAAGTGCTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGVQESF*KKCSPA
Trigger: GGCTGGAGAGCACTTCTTCCAGAAGCTCTCCTGCAC...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTGCCCGAATGTGCCGCTGTCCAGCTCATCTaGATGAGCTGGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DSLADQPGYLEQELPECAAVQLI*MSWALG
Trigger: ACCCAGGGCCCAGCTCATCCAGATGAGCTGGACAGC...GGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGGCAGGACGATGGGTaGGGGGTTTTCGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGGQDDG*GVFVGL
Trigger: GAGTCCTACGAAAACCCCCCACCCATCGTCCTGCCC...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TCGAGCCAGGCGCAATGCGGAGCCGCACACAGAACTGCGGGTCGGCAGAGGGCGGGAAATGGATCTTCTTaGCTGTTTCCACGTCGGACT +
Preference number: 4 (lower is better)
Translates to: SSQAQCGAAHRTAGRQRAGNGSS*LFPRRT
Trigger: AGTCCGACGTGGAAACAGCCAAGAAGATCCATTTCC...CGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCTCCGCATTGCGCCTGGCTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGGGCAGGCAGAGGCCATaGGGAGCCCCTGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKGRQRP*GAPAAP
Trigger: AGGGGCCGCAGGGGCTCCCCATGGCCTCTGCCTGCC...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACCTGGGGCCGCCAGCCTaGTATCAGGGCCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHLGPPA*YQGHAG
Trigger: ACCAGCGTGGCCCTGATACCAGGCTGGCGGCCCCAG...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGCCACTGTCTTTCCTCTaGCCACAGTCCACACCCCTC +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGPLSFL*PQSTPL
Trigger: GAGGGGTGTGGACTGTGGCCAGAGGAAAGACAGTGG...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCCCCCGGGATCACTGGTaGGACTGCATTCGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSPRDHW*DCIRLE
Trigger: TTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGG...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CAA 72 bp TTCTCCCAGACAGTCTCGCGGATCAGCCTGGCTATCTaGAGCAGGAGCTGCCCGAATGTGCCCGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FSQTVSRISLAI*SRSCPNVPGWK
Trigger: CTTCCAGCCGGGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTCTGGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCGTTTATCCCTGCCGTaGTGGTGTCCACCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRERLSLP*WCPPPW
Trigger: CCAAGGAGGTGGACACCATCACGGCAGGGATAAACG...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCACCACCTCGGAGAAGTTaGCGGAGATGTGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSPPRRS*RRCAPR
Trigger: CCGGGGCGCACATCTCCGTCAACTTCTCCGAGGTGG...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCTCAGCCTGGCTATCTTaGGCAGGAGCTGCCCGAATG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSSAWLS*AGAARM
Trigger: CATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGA...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTGCCCGAATGTGCCTGTCGAGGAGCTGGTTaGGAAGCAGTGTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: DSLADQPGYLEQELPECACRGAG*EAVSRR
Trigger: TCTCCGGGACACTGCTTCTCAACCAGCTCCTCGACA...GGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGGTTCCAGCTCCACCGTaGAGACGTAGCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGVPAPP*RRSRSP
Trigger: AGGACTTCTGCTACGTCTTCACGGTGGAGCTGGAAC...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GAAGAAGAAGAGGTAGGCGAGCATCTGCGAGGCCACCTCGGGGTGCACCTGCAGGTTCCAGCTCCACCGTaGAGACGTAGCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: EEEEVGEHLRGHLGVHLQVPAPP*RRSRSP
Trigger: AGGACTTCTGCTACGTCTTCACGGTGGAGCTGGAAC...CTGCAGGTGCACCCCGAGGTGGCCTCGCAGATGCTCGCCTACCTCTTCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCGTTGCCGGCGGATGGTaGAGTGTAGAGGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSVAGGW*SVEAGC
Trigger: ACATCCTGCCTCTACACTGCACCATCCGCCGGCAAC...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGATGGGCTCCTGGAGTTaGGCCTGCTTCTCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGMGSWS*ACFSAS
Trigger: ACTAGCAGAGAAGCAGGCGCAACTCCAGGAGCCCAT...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTGCCCGAATGTGCCCCAGCTGCTCCTCCATaGTCTGCATGTAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: DSLADQPGYLEQELPECAPAAPP*SACRVG
Trigger: GCCCACTCTACATGCAGAGCATGGAGGAGCAGCTGG...GGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGAGCTTCTGGAAGAAGTaGTCTCCAGCCGCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRESFWKK*SPAAPK
Trigger: CTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAAGCT...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGCAGGTGCTGGTAGATaGTGTCGTCCAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREAGAGR*CRPGSW
Trigger: CCAACTGCCTGGACGACAGCATCTACCAGCACCTGC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGCCGGGGGCGCCCAGGTaGGTGTGCATCCCGTCGATC +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKPGAPR*VCIPSI
Trigger: GATCGACGGGATGCACACGCACCTGGGCGCCCCCGG...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTGGCCCAGGAGGCTGCTaGCATTCACCTCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTGPGGC*HSPPGY
Trigger: GTATCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCC...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCAAGGCCCAGGAGGCTaGTGCCATTCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAEQGPGG*CHSPPG
Trigger: TCCTGGAGGTGAATGGCAGCAGCCTCCTGGGCCTTG...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCACACTGCATTCTCCCGTaGCGGTGGCAGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSHCILP*RWQAEA
Trigger: GGCCTCTGCCTGCCACCGGCACGGGAGAATGCAGTG...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGCCCCGAGGCAGCAAGTaGCCTGCCCTGGTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKPRGSK*PALVLR
Trigger: GCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGG...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCTTTGGAAATGCCTTaGCACTGTCTTTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPLEMP*HCLSSG
Trigger: GCCAGAGGAAAGACAGTGGCAAGGCATTTCCAAAGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCACGCTGGCGCCCAGGCTaGAGAAGGTGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSRWRPG*RRWSPG
Trigger: ACCTGGACTCCACCTTCTCCAGCCTGGGCGCCAGCG...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACCAGCCATGGCGCAGCTaGCCAGCGAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHQPWRS*PARWAP
Trigger: AGGAGCCCATCTCGCTGGCCAGCTGCGCCATGGCTG...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCCCGGTGCAGCTGTGCTaGGCTCAGTGCGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSPVQLC*AQCGER
Trigger: GCGTTCCCCGCACTGAGCCCAGCACAGCTGCACCGG...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAACCCGGGACCCAACTTaGTCAGTTACAAAACAGGGA +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPTRDPT*SVTKQG
Trigger: TCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGT...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACACCACTTTCCAACGCCTaGGTGTCTAGACCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTPLSNA*VSRPFS
Trigger: AGAGAAAGGTCTAGACACCCAGGCGTTGGAAAGTGG...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAAGTATTTTGGGAACCTaGCAGTGGTCGCCGTTTCGA +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPSILGT*QWSPFR
Trigger: TCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCACCCTTCAGTCTGGCTTaGAAGGTCCCAGAATATCAC +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPPFSLA*KVPEYH
Trigger: GTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGG...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTGAGTCCGTTCCTCTGCCCTTCAGTCTGGCTTaGAAGGTCCCAGAATATCAC +
Preference number: 4 (lower is better)
Translates to: CRVSFRSCTPEAAESVPLPFSLA*KVPEYH
Trigger: GTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGG...CAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGATAAAACATGGTGGGTaGGGCTTCATGGATGAGGAC +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQIKHGG*GFMDED
Trigger: GTCCTCATCCATGAAGCCTCACCCACCATGTTTTAT...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCCCACCTCGGAGAAGTTaGCGGAGATGTGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSPPRRS*RRCAPR
Trigger: CCGGGGCGCACATCTCCGTCAACTTCTCCGAGGTGG...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTTCAGCCTGGCTATCTTaGGCAGGAGCTGCCCGAATG +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTSAWLS*AGAARM
Trigger: CATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGA...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTGCCCGAATGTGCCATTCCTTCGAGCCTGTaGTGTCCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DSLADQPGYLEQELPECAIPSSL*CPAAPP
Trigger: TGGAGGAGCAGCTGGACATCACAGGCTCGAAGGAAT...GGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR TCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCATCTTCTTCCCGCCATaGCGGATCAGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSIFFPP*RIRSTA
Trigger: AGCTGTGGACCTGATCCGTCATGGCGGGAAGAAGAT...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATGCCTGCTGCCCGAGTTaGGACCCCAGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PKALQSGLEGPRISLMLHACCPS*DPSRAP
Trigger: GGGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGC...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCATGTTGCTATCAAAGATaGCCCTGGGCCACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTACCYQR*PWATSS
Trigger: GGAACTGGTGGCCCAGGGTCATCTTTGATAGCAACA...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAAGCTACTCAGGAGACTaGGGAGAATTGCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTSYSGD*GELLEP
Trigger: AGGTTCAAGCAATTCTCCTCAGTCTCCTGAGTAGCT...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGAGCTACTCAGGAGACTaGGGAGAATTGCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQSYSGD*GELLEP
Trigger: AGGTTCAAGCAATTCTCCTCAGTCTCCTGAGTAGCT...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGTGGCCGAGTGCTGGATaGAGAGGCACAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVWPSAG*RGTGGR
Trigger: CCTTCCTCCTGTGCCTCTGCATCCAGCACTCGGCCA...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCACGGGCACTCCAGGAGTaGCGGGAGGCAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSRALQE*READVQ
Trigger: CTGTACATCTGCCTCCCGGCACTCCTGGAGTGCCCG...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGAGCCGCACACAGAACTaGGGGTCGGCAGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKSRTQN*GSAEGA
Trigger: CGCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCT...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGGGCCACCTTTGGAAATaGCTTGCCACTGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGGHLWK*LATVFP
Trigger: AGGAAAGACAGTGGCAAGGCATTTCCAAAGGTGGCC...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGAAGGCCGGAGAATATTaGAGGGAAGAAGAGATAAGC +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGKAGEY*REEEIS
Trigger: GCTTATCTCTTCTTCCCTGCAATATTCTCCGGCCTT...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCGTGGGTGAGGCTTCATaGATGAGGACTGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSVGEAS*MRTVGF
Trigger: GAAGCCCACAGTCCTCATCCATGAAGCCTCACCCAC...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCCGCTGGCGCCCAGGCTaGAGAAGGTGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSRWRPG*RRWSPG
Trigger: ACCTGGACTCCACCTTCTCCAGCCTGGGCGCCAGCG...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCCCGAATGTGCCCGGCTaGAAGTGGGTGGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSPNVPG*KWVAEC
Trigger: GCACTCGGCCACCCACTTCCAGCCGGGCACATTCGG...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGAGATGTACAGGGACTTaGAGACATAGTAGACGCACT +
Preference number: 4 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQRCTGT*RHSRRT
Trigger: AGTGCGTCTACTATGTCTCCAAGTCCCTGTACATCT...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCTCGCTGGCCGTCAGCGTGCAGGAGAACAGCGATTCCTTCGAGCCTGTGATGTGCAGGAGAGCTTCTaGAAGAAGTGCTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLAGRQRAGEQRFLRACDVQESF*KKCSPA
Trigger: GGCTGGAGAGCACTTCTTCCAGAAGCTCTCCTGCAC...ATCACAGGCTCGAAGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCGAGGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGCCTGGAAGCCGTCGCTaGGCAGGACGATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKPGSRR*AGRWVG
Trigger: CCCCACCCATCGTCCTGCCCAGCGACGGCTTCCAGG...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGTGTCGTCCAGGCAGTTaGCTTCCAAGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRECRPGS*LPSPPG
Trigger: TCCAGGTGGACTTGGAAGCCAACTGCCTGGACGACA...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCAGAAGTCCTCGGTGCTaGAGCTGCGGCTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSRSPRC*SCGWTG
Trigger: CCCCGTCCAGCCGCAGCTCCAGCACCGAGGACTTCT...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACAGGGAGCAGGAGTCCTaGGAGAGGAAGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHREQES*ERKQGP
Trigger: TGGGCCCTGCTTCCTCTCCCAGGACTCCTGCTCCCT...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTTTTATCCAGTATTTTaGGAACCTGGCAGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: GGLGASETIRPVHFPTPGFYPVF*EPGSGR
Trigger: GCGACCACTGCCAGGTTCCCAAAATACTGGATAAAA...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACGACCAGAACAGCCAGTaGCAGCCCTCACCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHDQNSQ*QPSPVP
Trigger: CGGGACTGGTGAGGGCTGCCACTGGCTGTTCTGGTC...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTGCTCGATCAACGTCATaGTCCTCTGCAGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTARSTS*SSAAAC
Trigger: ACACGCTGCTGCAGAGGATCATGACGTTGATCGAGC...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACAGGTGCATCTGCAACTaGTGCCGGGACCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHRCICN*CRDPLP
Trigger: GGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCT...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGACTGAGGAGAATTGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGLRRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCAATTCTCCTCAG...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGGGCGGGCAGATCACTTaGTGTCAGTTTGAAATCAGC +
Preference number: 4 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKGGQIT*CQFEIS
Trigger: GCTGATTTCAAACTGACATCAAGTGATCTGCCCGCC...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGTCTGCCGCTTCAGTTTaGTCTTGGTGGGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVSAASV*SWWAGT
Trigger: TGTCCCCGCCCACCAAGAGCAAACTGAAGCGGCAGA...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATCGAAAGCACCGGGCCTaGCACCGCTGCCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: PKALQSGLEGPRISLMLHRKHRA*HRCPAS
Trigger: CGATGCTGGGCAGCGGTGGCAGGCCCGGTGCTTTCG...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATATCCACTCCAGGAGCTaGTGCAGGCGGGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PKALQSGLEGPRISLMLHIHSRS*CRRAQA
Trigger: GGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGAT...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTCCTAGAGAGGGGGCGTaGGGAAATGGATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTPREGA*GNGSSW
Trigger: CCAAGAAGATCCATTTCCGCACGCCCCCTCTCTAGG...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CGTGGTGTCCCCGGGATCACTGGTGGGACTGCATTCGCCTGGAAGCTCAGCAAGCCTTTGGAAATGCCTTaGCACTGTCTTTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RGVPGITGGTAFAWKLSKPLEMP*HCLSSG
Trigger: GCCAGAGGAAAGACAGTGGCAAGGCATTTCCAAAGG...CTTGCTGAGCTTCCAGGCGAATGCAGTCCCACCAGTGATCCCGGGGACACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTCCTCGCTGGCCGTCAGCGTGCAGGAGAACAGCGATTCCTTCGAGCCTGTGATATGCTGGACAACAGCTaGCTCTGCCGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LLAGRQRAGEQRFLRACDMLDNS*LCRFSL
Trigger: CAAACTGAAGCGGCAGAGCCAGCTGTTGTCCAGCAT...ATCACAGGCTCGAAGGAATCGCTGTTCTCCTGCACGCTGACGGCCAGCGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTGAGTCCGTTCCTCTGGGTTTCCATAATTCCTaGATCAAGAGGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CRVSFRSCTPEAAESVPLGFHNS*IKRGFS
Trigger: TGAGAAGCCCCTCTTGATCCAGGAATTATGGAAACC...CAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGCAGCCATGGCGCAGCTaGCCAGCGAGATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKQPWRS*PARWAP
Trigger: AGGAGCCCATCTCGCTGGCCAGCTGCGCCATGGCTG...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAACATCCAGAAAAGAATaGGCTGCAAGTCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTTSRKE*AASLEP
Trigger: TGGTTCCAGACTTGCAGCCCATTCTTTTCTGGATGT...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATCCGGTGCAGCTGTGCTaGGCTCAGTGCGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: PKALQSGLEGPRISLMLHPVQLC*AQCGER
Trigger: GCGTTCCCCGCACTGAGCCCAGCACAGCTGCACCGG...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGTGTCGTCCAGGCAGTTaGCTTCCAAGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAECRPGS*LPSPPG
Trigger: TCCAGGTGGACTTGGAAGCCAACTGCCTGGACGACA...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCATTTTATCCAGTATTTTaGGAACCTGGCAGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPFYPVF*EPGSGR
Trigger: GCGACCACTGCCAGGTTCCCAAAATACTGGATAAAA...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGATAAAACATGGTGGGTaGGGCTTCATGGATGAGGAC +
Preference number: 4 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGIKHGG*GFMDED
Trigger: GTCCTCATCCATGAAGCCTCACCCACCATGTTTTAT...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGAGTTGGTGGAGCTGCTaGGGATGCCCAGCGACCCAC +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKSWWSC*GCPATH
Trigger: GTGGGTCGCTGGGCATCCTCAGCAGCTCCACCAACT...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGCGGGCAGATCACTTaGTGTCAGTTTGAAATCAGC +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGGGQIT*CQFEIS
Trigger: GCTGATTTCAAACTGACATCAAGTGATCTGCCCGCC...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCTCCTGGAGTTGCGCCTaGTTCTCTGCTAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSSWSCA*FSASSL
Trigger: CAAAGAACTAGCAGAGAAGCAGGCGCAACTCCAGGA...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGCCAGGTGGGACCGGGTaGCGGGCCTGTGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRPGGTG*RACGGV
Trigger: GACACCCCCACAGGCCCGGCACCCGGTCCCACCTGG...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGCACCAGGTCCAGAAATaGAGACCGTCCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVHQVQK*RPSRAV
Trigger: CACAGCTCTGGACGGTCTGCATTTCTGGACCTGGTG...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CCTGGGACAGACCCAGGACACCGATCTGGGGACCCCGCACAGACCTCTGTCCCAGAATATCACTTATGCTaGATCCTGTTGTTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGTDPGHRSGDPAQTSVPEYHLC*ILLFGA
Trigger: TGCTCCGAACAACAGGATGCAGCATAAGTGATATTC...TGGGACAGAGGTCTGTGCGGGGTCCCCAGATCGGTGTCCTGGGTCTGTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGGGTGAGGCTTCATaGATGAGGACTGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVVGEAS*MRTVGF
Trigger: GAAGCCCACAGTCCTCATCCATGAAGCCTCACCCAC...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAGGGCTGCCGGGGCTaGCTCTGCTCCGCAGACCCC +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNQGCRG*LCSADP
Trigger: GGGGTCTGCGGAGCAGAGCCAGCCCCGGCAGCCCTG...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACGTTCCTCTGCCTCTCTaGGAGCGCTTTTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHVPLPL*ERFSTG
Trigger: CCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAAC...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGATGTGGGAGGAACTGTTaGTGGCCACCTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGCGRNC*WPPLEM
Trigger: CATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACA...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCAAAGAGCTTCTTTCCATaGATGCTGAGTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGSRSAPRGVPGITGGTAKSFFP*MLSSRS
Trigger: GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTT...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CAA 72 bp ACTGATGCCGGGACCCTCTTCCCCAGGGTTTCTCTGTaGCTATCAAAGATGACCCTGGGCCACCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TDAGTLFPRVSL*LSKMTLGHQFH
Trigger: GTGGAACTGGTGGCCCAGGGTCATCTTTGATAGCAACAGAGAAACCCTGGGGAAGAGGGTCCCGGCATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGAGGTGCATCTGCAACTaGTGCCGGGACCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKRCICN*CRDPLP
Trigger: GGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCT...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCCCAGCTGCTCCTCCATaGTCTGCATGTAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSPAAPP*SACRVG
Trigger: GCCCACTCTACATGCAGAGCATGGAGGAGCAGCTGG...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGTCCGGGACAGCATGCTaGACAACAGCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKSGTAC*TTAGSA
Trigger: GGCAGAGCCAGCTGTTGTCCAGCATGCTGTCCCGGA...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGCGGCGGGGTCATCGCTaGCGCCCAGGCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRRRGHR*RPGWRR
Trigger: CCTTCTCCAGCCTGGGCGCCAGCGATGACCCCGCCG...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGCCAGCTCACGGGCGCTaGAGGTGCCGGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRPAHGR*RCRWPG
Trigger: TCCTGGCCACCGGCACCTCCAGCGCCCGTGAGCTGG...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp AGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGTCTCTGCTAGTTCTTTaGTTTTCTCCCAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: RLSGAWLGSRSAPRGVPGSLLVL*FSPRQS
Trigger: AGACTGTCTGGGAGAAAACCAAAGAACTAGCAGAGA...CCCGGGGACACCACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGAATGGGCTGCAAGTCTaGAACCAGATCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVNGLQV*NQISHG
Trigger: GCCATGGCTGATCTGGTTCCAGACTTGCAGCCCATT...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACTCGGGGCACACTGGCTaGGAGGCCCCACTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNSGHTG*EAPLPG
Trigger: GCCTGGCAGTGGGGCCTCCCAGCCAGTGTGCCCCGA...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTAAAGGCCCTTCAGTCTaGCTTGGAAGGTCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTKGPSV*LGRSQN
Trigger: ATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTT...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCACTTGATGTCAGTTTaGAATCAGCCTGGCCAACGT +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAEHLMSV*NQPGQR
Trigger: ACGTTGGCCAGGCTGATTTCAAACTGACATCAAGTG...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACGGGTGCACCTGCAGCTaGCGCAGGAGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNGCTCS*RRRSRA
Trigger: AGCCCTGGACCTCCTGCGGCAGCTGCAGGTGCACCC...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGCTCGGGGCCTCCAGGTaGCCGTCAAGGACCACGTGG +
Preference number: 4 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRLGASR*PSRTTW
Trigger: CCACGTGGTCCTTGACGGGCACCTGGAGGCCCCGAG...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp ACCTGCAGCTGCCGCAGGAGGTCCAGGGCTGCCTGGTACACAGACACCACGCGGCAATTTCACGTCATCTaGCATATAAATAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: TCSCRRRSRAAWYTDTTRQFHVI*HINRTY
Trigger: GTAGGTTCTATTTATATGGCAGATGACGTGAAATTG...CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCTCCTGCGGCAGCTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGAGCCGCACACAGAACTaGGGGTCGGCAGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRSRTQN*GSAEGA
Trigger: CGCGCCCTCTGCCGACCCGCAGTTCTGTGTGCGGCT...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTGCCCGAATGTGCCAAGGCCGGAGAATATTaGAGGGAAGAAGAGATAAGC +
Preference number: 4 (lower is better)
Translates to: DSLADQPGYLEQELPECAKAGEY*REEEIS
Trigger: GCTTATCTCTTCTTCCCTGCAATATTCTCCGGCCTT...GGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CCA 90 bp CCAGTGAGAGGTGCATCTGCAACTGATGCCGGGACCCTCTTCCCCAGGGTTTCTAGTGGGCATTTCTGCTaGATAAAGTACAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PVRGASATDAGTLFPRVSSGHFC*IKYRSS
Trigger: CGAGCTCCTGTACTTTATCCAGCAGAAATGCCCACT...AGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGCTCTGCATGTAGAGTaGGCATTTCTGCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: APHPGPNLVSYKTGTKAGALHVE*AFLLDK
Trigger: TTTATCCAGCAGAAATGCCCACTCTACATGCAGAGC...TCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CGGGAGGCAGATGTACAGGGACTTGGAGACATAGTAGACGCACTGCTGGAAGGCTGTGGGAGGAACTGTTaGTGGCCACCTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: READVQGLGDIVDALLEGCGRNC*WPPLEM
Trigger: CATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACA...GCCTTCCAGCAGTGCGTCTACTATGTCTCCAAGTCCCTGTACATCTGCCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR GCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGAACGTCATGATCCTCTaGAGCAGCGTGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKNVMIL*SSVSSR
Trigger: CCTGGAGGACACGCTGCTGCAGAGGATCATGACGTT...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp AGTATTTTGGGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCAGAAAAGAATGGGCTaGAAGTCTGGAACCAGATCA +
Preference number: 4 (lower is better)
Translates to: SILGTWQWSPFRARRNAEQKRMG*KSGTRS
Trigger: TGATCTGGTTCCAGACTTGCAGCCCATTCTTTTCTG...CTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACTGCCGGGGCTGGCTCTaGTCCGCAGACCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNCRGWL*SADPTE
Trigger: TTCTGTGGGGTCTGCGGAGCAGAGCCAGCCCCGGCA...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCGAACCTACACTGAGATaGATGTTATCAACAGGCATG +
Preference number: 4 (lower is better)
Translates to: GIRATLVALVGERNSGGSEPTLR*MLSTGM
Trigger: CATGCCTGTTGATAACATGCATCTCAGTGTAGGTTC...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAACCTACACTGAGATaGATGTTATCAACAGGCATG +
Preference number: 4 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREEPTLR*MLSTGM
Trigger: CATGCCTGTTGATAACATGCATCTCAGTGTAGGTTC...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTGCTCTGCATGTAGAGTaGGCATTTCTGCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTALHVE*AFLLDK
Trigger: TTTATCCAGCAGAAATGCCCACTCTACATGCAGAGC...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGAAGCCCAGTGTCACCACTTTCCAACGCCTaGGTGTCTAGACCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PNLVSYKTGTKAGGSPVSPLSNA*VSRPFS
Trigger: AGAGAAAGGTCTAGACACCCAGGCGTTGGAAAGTGG...TGACACTGGGCTTCCTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACAGTATTTTGGGAACCTaGCAGTGGTCGCCGTTTCGA +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHSILGT*QWSPFR
Trigger: TCGAAACGGCGACCACTGCCAGGTTCCCAAAATACT...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGAAGAGCTTCTTTCCATaGATGCTGAGTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVKSFFP*MLSSRS
Trigger: GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTT...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACGTCCACCTCCTTGGCTaGCAGCTCCTCCACGTCCGA +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNVHLLG*QLLHVR
Trigger: TCGGACGTGGAGGAGCTGGCAGCCAAGGAGGTGGAC...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACAGTGGGCATTTCTGCTaGATAAAGTACAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHSGHFC*IKYRSS
Trigger: CGAGCTCCTGTACTTTATCCAGCAGAAATGCCCACT...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACAGGTCCAGGGCTGCCTaGTACACAGACACCACGCGG +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNRSRAA*YTDTTR
Trigger: CCGCGTGGTGTCTGTGTACCAGGCAGCCCTGGACCT...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACAGGCTCAGGGCCAAGTaGAGTGCTGGGAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNRLRAK*SAGRRE
Trigger: CTCACGCCTCCCAGCACTCCACTTGGCCCTGAGCCT...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGGGGAGGAACTGTTGGTaGCCACCTTTGGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKGRNCW*PPLEMP
Trigger: AGGCATTTCCAAAGGTGGCCACCAACAGTTCCTCCC...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACGTGTGGCCAGCAGGTTaGGGGTGCAGGAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNVWPAG*GCRRAS
Trigger: AGAAGCTCTCCTGCACCCTCAACCTGCTGGCCACAC...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGTGGCCGAGTGCTGGATaGAGAGGCACAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRWPSAG*RGTGGR
Trigger: CCTTCCTCCTGTGCCTCTGCATCCAGCACTCGGCCA...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp GCATCCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATTGCAGGGAAGAAGGGCCACCTTTGGAAATaGCTTGCCACTGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ASCCSEQVRRPENIAGKKGHLWK*LATVFP
Trigger: AGGAAAGACAGTGGCAAGGCATTTCCAAAGGTGGCC...CTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR GCA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCCAGAAAAGAATGGGCTaGAAGTCTGGAACCAGATCA +
Preference number: 4 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSQKRMG*KSGTRS
Trigger: TGATCTGGTTCCAGACTTGCAGCCCATTCTTTTCTG...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACAGCAGATGCGGGGACTaGTACAGCGAGTACCGCATG +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNSRCGD*YSEYRM
Trigger: CATGCGGTACTCGCTGTACCAGTCCCCGCATCTGCT...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACTCTCTGCTAGTTCTTTaGTTTTCTCCCAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHSLLVL*FSPRQS
Trigger: AGACTGTCTGGGAGAAAACCAAAGAACTAGCAGAGA...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACGTTCCTCTGCCTCTCTaGGAGCGCTTTTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNVPLPL*ERFSTG
Trigger: CCCTGTGGAAAAGCGCTCCCAGAGAGGCAGAGGAAC...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CAA 72 bp CCTGTTGTTCGGAGCAAGTCAGAAGGCCGGAGAATATaGCAGGGAAGAAGAGATAAGCCCCCTTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PVVRSKSEGRRI*QGRRDKPPSLC
Trigger: ACAAAGAGAAGGGGGCTTATCTCTTCTTCCCTGCAATATTCTCCGGCCTTCTGACTTGCTCCGAACAACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACATTCCTTCGAGCCTGTaGTGTCCAGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNIPSSL*CPAAPP
Trigger: TGGAGGAGCAGCTGGACATCACAGGCTCGAAGGAAT...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR TCA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGCTCCCTTCCTTGGGGTaGTGCCAAGAGCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRLPSLG*CQELLS
Trigger: GGAAAGAAGCTCTTGGCATCACCCCAAGGAAGGGAG...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CCA 90 bp TGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACGGGAGGAACTGTTGGTaGCCACCTTTGGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: CQELLSMDAEFQEHENRNGRNCW*PPLEMP
Trigger: AGGCATTTCCAAAGGTGGCCACCAACAGTTCCTCCC...GTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
3UTR CAA 72 bp AGCAGGGCACCCTCTAAGAACGGGAAAAATAGTTTATaGAACCGTACTTCTCCATTGAAGTCTTTAAACATA +
Preference number: 4 (lower is better)
Translates to: SRAPSKNGKNSL*NRTSPLKSLNI
Trigger: TATGTTTAAAGACTTCAATGGAGAAGTACGGTTCAATAAACTATTTTTCCCGTTCTTAGAGGGTGCCCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGCTGATGCTGGGCTaGCTGGAGGGGGTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RVGRGRGADALHLAVAHTRLMLG*LEGVRW
Trigger: CCAGCGGACCCCCTCCAGCAAGCCCAGCATCAGCCT...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS TCA 90 bp GGGCGGCAGCGGGCAGGGCGTTCACTGGGCTCAGGCTGGTCTCACTaGCTGTGCGGCGCAACCGGGGTGGAGGAGAGCTCCGGGCATCCC +
Preference number: 5 (lower is better)
Translates to: GRQRAGRSLGSGWSH*LCGATGVEESSGHP
Trigger: GGGATGCCCGGAGCTCTCCTCCACCCCGGTTGCGCCGCACAGTCAGTGAGACCAGCCTGAGCCCAGTGAACGCCCTGCCCGCTGCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 90 bp TCCAGGACCAGCCTCCCCGCGGCCTGGCCGCTGTCCGGGAGCGGTTaGCGGCGGATGGTGCAGTGTAGAGGCAGGATGTCGGGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SRTSLPAAWPLSGSG*RRMVQCRGRMSGAE
Trigger: CTCAGCCCCCGACATCCTGCCTCTACACTGCACCATCCGCCGGCAACCGCTCCCGGACAGCGGCCAGGCCGCGGGGAGGCTGGTCCTGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 90 bp TGCCCAGCATCGCCGGCTTGGCCCACCACGTCACACAGCACGTACTaGCCGGCCTGCCTGGGGTCCAGGGCGTACCGCTCCAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: CPASPAWPTTSHSTY*PACLGSRAYRSSAS
Trigger: GGAGGCGCTGGAGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CCA 90 bp ACCCGAAAGCACCGGGCCTGCCACCGCTGCCCAGCATCGCCGGCTTaGCCCACCACGTCACACAGCACGTACTGGCCGGCCTGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: TRKHRACHRCPASPA*PTTSHSTYWPACLG
Trigger: CCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCGGTGCTTTCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS-3UTR CAA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCCGCCTGCTGCCCGAGTaGAGACCCCAGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGARLLPE*RPQQGT
Trigger: GGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCG...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 90 bp TCGCCGGCTTGGCCCACCACGTCACACAGCACGTACTGGCCGGCCTaGCTGGGGTCCAGGGCGTACCGCTCCAGCGCCTCCTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: SPAWPTTSHSTYWPA*LGSRAYRSSASFTS
Trigger: GCTGGTGAAGGAGGCGCTGGAGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS-3UTR CAA 90 bp GCGGCCCCTCCGAGCAGCCCACGCCTGCTGCCCGAGTTGAGACCCCAGCAGGGCCTCTGCCGCTTCAGTTaGCTCTTGGTGGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: AAPPSSPRLLPELRPQQGLCRFS*LLVGGD
Trigger: GTCCCCGCCCACCAAGAGCAAACTGAAGCGGCAGAG...GCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCGTGGGCTGCTCGGAGGGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 90 bp CGGCTTGGCCCACCACGTCACACAGCACGTACTGGCCGGCCTGCCTaGGGTCCAGGGCGTACCGCTCCAGCGCCTCCTTCACCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: RLGPPRHTARTGRPA*GPGRTAPAPPSPAH
Trigger: GTGAGCTGGTGAAGGAGGCGCTGGAGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS-3UTR CAA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCCCCACCTCGGAGAAGTaGACGGAGATGTGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGAPTSEK*TEMCAP
Trigger: CGGGGCGCACATCTCCGTCAACTTCTCCGAGGTGGG...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 90 bp CCTCTGCAGGGGAGAGAGGATGCCCGTAATGGCCACAGGAGAAGCTaGCTCCCTCGCCAGGCCGCCCCGCCCAACGGTGTGGGAACCCAG +
Preference number: 5 (lower is better)
Translates to: PLQGREDARNGHRRS*LPRQAAPPNGVGTQ
Trigger: CTGGGTTCCCACACCGTTGGGCGGGGCGGCCTGGCGAGGGAGGCAGCTTCTCCTGTGGCCATTACGGGCATCCTCTCTCCCCTGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472999.5
CDS CCA 90 bp CACCAGGGGCCGACAGCTGGGTGGAGAGCTCGGCGGGGTCATCGCTaGCGCCCAGGCTGGAGAAGGTGGAGTCCAGGTCCCGGTACTTGT +
Preference number: 5 (lower is better)
Translates to: HQGPTAGWRARRGHR*RPGWRRWSPGPGTC
Trigger: ACAAGTACCGGGACCTGGACTCCACCTTCTCCAGCCTGGGCGCCAGCGATGACCCCGCCGAGCTCTCCACCCAGCTGTCGGCCCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS-3UTR CAA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGGCTGTCCGGGAGCGGTaGCCGGCGGATGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQAVRER*PADGAV
Trigger: CACTGCACCATCCGCCGGCAACCGCTCCCGGACAGC...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp AGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCAGGGGGCAGCGACTGAGGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RARGGRAAPRRSAHQGAATEENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCCTCAGT...CGCTGCCCCCTGGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CGGGTCGGCAGAGGGCGCGGGGCGGACGCGCTGCACCTCGCCGTAGCGCACACCGCCCTTCAGTCTGGCTaGGAAGGTCCCAGAATATCA +
Preference number: 5 (lower is better)
Translates to: RVGRGRGADALHLAVAHTALQSG*EGPRIS
Trigger: TGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGC...GGTGTGCGCTACGGCGAGGTGCAGCGCGTCCGCCCCGCGCCCTCTGCCGACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 90 bp AGGCTGATGCTGGGCTTGCTGGAGGGGGTCCGCTGGCCCACCGTGTaGCGGTCCCGGTTGAGCACATACACCAGGCTGTCGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RLMLGLLEGVRWPTV*RSRLSTYTRLSCCW
Trigger: CCAGCAGCACGACAGCCTGGTGTATGTGCTCAACCGGGACCGGCACACGGTGGGCCAGCGGACCCCCTCCAGCAAGCCCAGCATCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399583.4
CDS GCA 90 bp AAGAGGGGCTTCTCACTGTCCCCAAACACCCGAAAGCACCGGGCCTaGCACCGCTGCCCAGCATCGCCGGCTTGGCCCACCACGTCACAC +
Preference number: 5 (lower is better)
Translates to: KRGFSLSPNTRKHRA*HRCPASPAWPTTSH
Trigger: GTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCGGTGCTTTCGGGTGTTTGGGGACAGTGAGAAGCCCCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 90 bp AGGCTGATGCTGGGCTTGCTGGAGGGGGTCCGCTGGCCCACCGTGTaGCGGTCCCGGTTGAGCACATACACCAGGGTGCTGCTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: RLMLGLLEGVRWPTV*RSRLSTYTRVLLAV
Trigger: TACAGCCAGCAGCACCCTGGTGTATGTGCTCAACCGGGACCGGCACACGGTGGGCCAGCGGACCCCCTCCAGCAAGCCCAGCATCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS CCA 90 bp TGGAGAGCTCGGCGGGGTCATCGCTGGCGCCCAGGCTGGAGAAGGTaGAGTCCAGGTCCCGGTACTTGTAGCTCAGCGTCCGGGACAGCA +
Preference number: 5 (lower is better)
Translates to: WRARRGHRWRPGWRR*SPGPGTCSSASGTA
Trigger: TGCTGTCCCGGACGCTGAGCTACAAGTACCGGGACCTGGACTCCACCTTCTCCAGCCTGGGCGCCAGCGATGACCCCGCCGAGCTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CCA 90 bp ACAGCTGGGTGGAGAGCTCGGCGGGGTCATCGCTGGCGCCCAGGCTaGAGAAGGTGGAGTCCAGGTCCCGGTACTTGTAGCTCAGCGTCC +
Preference number: 5 (lower is better)
Translates to: TAGWRARRGHRWRPG*RRWSPGPGTCSSAS
Trigger: GGACGCTGAGCTACAAGTACCGGGACCTGGACTCCACCTTCTCCAGCCTGGGCGCCAGCGATGACCCCGCCGAGCTCTCCACCCAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS-3UTR CAA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGGTGTGCCGGTCCCGGTaGAGCACATACACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQVCRSR*STYTRL
Trigger: CAGCCTGGTGTATGTGCTCAACCGGGACCGGCACAC...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399583.4
CDS-3UTR CAA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGCCCACCTCGGAGAAGTaGACGGAGATGTGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQPTSEK*TEMCAP
Trigger: CGGGGCGCACATCTCCGTCAACTTCTCCGAGGTGGG...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGAGAGGGACGCTGGCCTCCTGCCCGGGTTAGGGCCGGTGGCCAGGGGGACGCTCGGAAATGGATCTTCTaGGCTGTTTCCACGTCGGAC +
Preference number: 5 (lower is better)
Translates to: GEGRWPPARVRAGGQGDARKWIF*AVSTSD
Trigger: GTCCGACGTGGAAACAGCCAAGAAGATCCATTTCCG...AGCGTCCCCCTGGCCACCGGCCCTAACCCGGGCAGGAGGCCAGCGTCCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGCGCTCCGCATCCACTCCAGGAGCTGCTGCAGGCGGGCGCAGGCCTGGACACCCACCCGGGACCCAACTaGGTCAGTTACAAAACAGGG +
Preference number: 5 (lower is better)
Translates to: GAPHPLQELLQAGAGLDTHPGPN*VSYKTG
Trigger: CCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTG...GGTGTCCAGGCCTGCGCCCGCCTGCAGCAGCTCCTGGAGTGGATGCGGAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS GCA 90 bp TTCTCACTGTCCCCAAACACCCGAAAGCACCGGGCCTGCCACCGCTaGCCAGCATCGCCGGCTTGGCCCACCACGTCACACAGCACGTAC +
Preference number: 5 (lower is better)
Translates to: FSLSPNTRKHRACHR*PASPAWPTTSHSTY
Trigger: GTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCGGTGCTTTCGGGTGTTTGGGGACAGTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 90 bp GGCTCCGTGAGGGAACGAGGGGGCCTTGGACCTGAGCCTGGAGTTTaGAACTTGGGCATGGACTCTCGGCTCCTTGACTCCCCCGCCGAG +
Preference number: 5 (lower is better)
Translates to: GSVRERGGLGPEPGV*NLGMDSRLLDSPAE
Trigger: CTCGGCGGGGGAGTCAAGGAGCCGAGAGTCCATGCCCAAGTTCCAAACTCCAGGCTCAGGTCCAAGGCCCCCTCGTTCCCTCACGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469399.1
CDS-3UTR CAA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGCTCTGCCGCTTCAGTTaGCTCTTGGTGGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQLCRFS*LLVGGD
Trigger: GTCCCCGCCCACCAAGAGCAAACTGAAGCGGCAGAG...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGGCTGATGCTGGGCTaGCTGGAGGGGGTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGRLMLG*LEGVRW
Trigger: CCAGCGGACCCCCTCCAGCAAGCCCAGCATCAGCCT...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGTGGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGCTGTCGTCCAGGCAGTaGGCTTCCAAGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: GGLGASETIRPVHFPTPGLSSRQ*ASKSTW
Trigger: CCAGGTGGACTTGGAAGCCAACTGCCTGGACGACAG...CCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp TTCACCTCCAGGATACGGTCCCCCAGCGACAGGCGCCCGTCGGCCGCTGCGGGGGCCCTTCAGTCTGGCTaGGAAGGTCCCAGAATATCA +
Preference number: 5 (lower is better)
Translates to: FTSRIRSPSDRRPSAAAGALQSG*EGPRIS
Trigger: TGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGC...CCCCGCAGCGGCCGACGGGCGCCTGTCGCTGGGGGACCGTATCCTGGAGGTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CAA 90 bp GCTAGGTGCTTCAGCGGCCAGAGGCTAGCTGGGCCTCCCCGACTCCACGGGGCCTCACAGTGTTGTAGATaGTCTGGGGCCTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ARCFSGQRLAGPPRLHGASQCCR*SGAWLG
Trigger: TCCCAGCCAGGCCCCAGACAATCTACAACACTGTGA...GGCCCCGTGGAGTCGGGGAGGCCCAGCTAGCCTCTGGCCGCTGAAGCACCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGTGTGCCGGTCCCGGTaGAGCACATACACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GTWQWSPFRARRNAEPHTVCRSR*STYTRV
Trigger: CACCCTGGTGTATGTGCTCAACCGGGACCGGCACAC...TGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CAA 90 bp CCAGTGAGAGGTGCATCTGCAACTGATGCCGGGACCCTCTTCCCCAGGGTTTCTGCTGTCCGGGAGCGGTaGCCGGCGGATGGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PVRGASATDAGTLFPRVSAVRER*PADGAV
Trigger: CACTGCACCATCCGCCGGCAACCGCTCCCGGACAGC...AGAAACCCTGGGGAAGAGGGTCCCGGCATCAGTTGCAGATGCACCTCTCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GAACCTGGCAGTGGTCGCCGTTTCGAGCCAGGCGCAATGCGGAGCCGCACACAGCTGTCGAGGAGCTGGTaGAGAAGCAGTGTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: EPGSGRRFEPGAMRSRTQLSRSW*RSSVPE
Trigger: CTCCGGGACACTGCTTCTCAACCAGCTCCTCGACAG...CTGTGTGCGGCTCCGCATTGCGCCTGGCTCGAAACGGCGACCACTGCCAGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 90 bp CGCTGGAGGTGCCGGTGGCCAGGACGCTCTTGTAGTGGGTTCCTGTaGAGACACTGTCCCCAAACACCTTCAGGACACCAGGGGCCGACA +
Preference number: 5 (lower is better)
Translates to: RWRCRWPGRSCSGFL*RHCPQTPSGHQGPT
Trigger: TGTCGGCCCCTGGTGTCCTGAAGGTGTTTGGGGACAGTGTCTGCACAGGAACCCACTACAAGAGCGTCCTGGCCACCGGCACCTCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS-3UTR CAA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCACTGTCGAGGAGCTGGTaGAGAAGCAGTGTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: LGSRSAPRGVPGITGGTALSRSW*RSSVPE
Trigger: CTCCGGGACACTGCTTCTCAACCAGCTCCTCGACAG...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CTGTCACCCCGAGGCAGCAAGTGCCCTGCCCTGGTCCTGCGCATGGTCAGCCAGTGTTGGTGGCCACCTTaGGAAATGCCTTGCCACTGT +
Preference number: 5 (lower is better)
Translates to: LSPRGSKCPALVLRMVSQCWWPP*EMPCHC
Trigger: ACAGTGGCAAGGCATTTCCAAAGGTGGCCACCAACA...CTGGCTGACCATGCGCAGGACCAGGGCAGGGCACTTGCTGCCTCGGGGTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGGCTCGGCGCCTCAGAGACCATCAGGCCGGTCCACTTTCCAACGCCTGGGTGTTCACAGTGTTGTAGATaGTCTGGGGCCTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: GLGASETIRPVHFPTPGCSQCCR*SGAWLG
Trigger: TCCCAGCCAGGCCCCAGACAATCTACAACACTGTGA...ACACCCAGGCGTTGGAAAGTGGACCGGCCTGATGGTCTCTGAGGCGCCGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS TCA 90 bp GAATTCCCGCCGACCACCCGGTGTGACATCCGAGCAGTTCAGGACTaGGAACAAGGCCTTGTAGCCAGGAACCCTCCAGCCCCACTGAGC +
Preference number: 5 (lower is better)
Translates to: EFPPTTRCDIRAVQD*EQGLVARNPPAPLS
Trigger: GCTCAGTGGGGCTGGAGGGTTCCTGGCTACAAGGCCTTGTTCTCAGTCCTGAACTGCTCGGATGTCACACCGGGTGGTCGGCGGGAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472999.5
CDS CCA 90 bp AGTCCAGGTCCCGGTACTTGTAGCTCAGCGTCCGGGACAGCATGCTaGACAACAGCTGGCTCTGCCGCTTCAGTTTGCTCTTGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: SPGPGTCSSASGTAC*TTAGSAASVCSWWA
Trigger: CGCCCACCAAGAGCAAACTGAAGCGGCAGAGCCAGCTGTTGTCCAGCATGCTGTCCCGGACGCTGAGCTACAAGTACCGGGACCTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS-3UTR CAA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCCGCTTCAGTTTGCTCTaGGTGGGCGGGGACATGATG +
Preference number: 5 (lower is better)
Translates to: GIRATLVALVGERNSGGSRFSLL*VGGDMM
Trigger: CATCATGTCCCCGCCCACCAAGAGCAAACTGAAGCG...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GACAGTCTCGCGGATCAGCCTGGCTATCTTGAGCAGGAGCTGCCCGAATGTGCCCGCTTCAGTTTGCTCTaGGTGGGCGGGGACATGATG +
Preference number: 5 (lower is better)
Translates to: DSLADQPGYLEQELPECARFSLL*VGGDMM
Trigger: CATCATGTCCCCGCCCACCAAGAGCAAACTGAAGCG...GGCACATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGATCCGCGAGACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CAA 90 bp TGCAGAGTCTCCTTCCGGAGCTGCACCCCGGAGGCCGCTGAGTCCGTTCCTCTGCCCAGGGTTTCTCTGTaGCTATCAAAGATGACCCTG +
Preference number: 5 (lower is better)
Translates to: CRVSFRSCTPEAAESVPLPRVSL*LSKMTL
Trigger: CAGGGTCATCTTTGATAGCAACAGAGAAACCCTGGG...CAGAGGAACGGACTCAGCGGCCTCCGGGGTGCAGCTCCGGAAGGAGACTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CAA 90 bp GGTATCAGGGCCACGCTGGTGGCTTTAGTAGGGGAGAGGAACTCAGGAGGGAGCATCAGCCTGGCTATCTaGAGCAGGAGCTGCCCGAAT +
Preference number: 5 (lower is better)
Translates to: GIRATLVALVGERNSGGSISLAI*SRSCPN
Trigger: ATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGAT...GCTCCCTCCTGAGTTCCTCTCCCCTACTAAAGCCACCAGCGTGGCCCTGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGATCAGCCTGGCTATCTaGAGCAGGAGCTGCCCGAAT +
Preference number: 5 (lower is better)
Translates to: LPTRDPTWSVTKQGRRREISLAI*SRSCPN
Trigger: ATTCGGGCAGCTCCTGCTCAAGATAGCCAGGCTGAT...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATCGCCTGCTGCCCGAGTaGAGACCCCAGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: PKALQSGLEGPRISLMLHRLLPE*RPQQGT
Trigger: GGTGCCCTGCTGGGGTCTCAACTCGGGCAGCAGGCG...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp TTCTGGAAGAAGTGCTCTCCAGCCGCCCCGAAGCCGGCGCTCCGCATCCACTCCTTATGCTGCATCCTGTaGTTCGGAGCAAGTCAGAAG +
Preference number: 5 (lower is better)
Translates to: FWKKCSPAAPKPALRIHSLCCIL*FGASQK
Trigger: CTTCTGACTTGCTCCGAACAACAGGATGCAGCATAA...GGAGTGGATGCGGAGCGCCGGCTTCGGGGCGGCTGGAGAGCACTTCTTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS CCA 90 bp ACATCCAGAAAAGAATGGGCTGCAAGTCTGGAACCAGATCAGCCATaGCGCAGCTGGCCAGCGAGATGGGCTCAGTTGCGCCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: TSRKEWAASLEPDQP*RSWPARWAQLRLLL
Trigger: GAGAAGCAGGCGCAACTGAGCCCATCTCGCTGGCCAGCTGCGCCATGGCTGATCTGGTTCCAGACTTGCAGCCCATTCTTTTCTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473130.5
CDS-3UTR CAA 90 bp CCAAAGGCCCTTCAGTCTGGCTTGGAAGGTCCCAGAATATCACTTATGCTGCATCCCAGCATCGCCGGCTaGGCCCACCACGTCACACAG +
Preference number: 5 (lower is better)
Translates to: PKALQSGLEGPRISLMLHPSIAG*AHHVTQ
Trigger: CTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGG...ATGCAGCATAAGTGATATTCTGGGACCTTCCAAGCCAGACTGAAGGGCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CCCCCTTCCACCGTTAAGGCATCAAATCAGAGTCCAGGATCCTGGGATCTGCACCTGTCGTCCAGGCAGTaGGCTTCCAAGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: PPSTVKASNQSPGSWDLHLSSRQ*ASKSTW
Trigger: CCAGGTGGACTTGGAAGCCAACTGCCTGGACGACAG...GTGCAGATCCCAGGATCCTGGACTCTGATTTGATGCCTTAACGGTGGAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CTGGGAAGTCGTTCTGCTCCACGTGGTGTCCCCGGGATCACTGGTGGGACTGCAACCTTTGGAAATGCCTaGCCACTGTCTTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LGSRSAPRGVPGITGGTATFGNA*PLSFLW
Trigger: CCAGAGGAAAGACAGTGGCAAGGCATTTCCAAAGGT...TGCAGTCCCACCAGTGATCCCGGGGACACCACGTGGAGCAGAACGACTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGTTGTGGGAGGAACTGTaGGTGGCCACCTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGLWEEL*VATFGN
Trigger: ATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACAA...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GAAGAAGAAGAGGTAGGCGAGCATCTGCGAGGCCACCTCGGGGTGCACCTGCAGTTGTGGGAGGAACTGTaGGTGGCCACCTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: EEEEVGEHLRGHLGVHLQLWEEL*VATFGN
Trigger: ATTTCCAAAGGTGGCCACCAACAGTTCCTCCCACAA...CTGCAGGTGCACCCCGAGGTGGCCTCGCAGATGCTCGCCTACCTCTTCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS-3UTR CAA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTCGGAAATGGATCTTCTaGGCTGTTTCCACGTCGGAC +
Preference number: 5 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTRKWIF*AVSTSD
Trigger: GTCCGACGTGGAAACAGCCAAGAAGATCCATTTCCG...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGCTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGTTCTCTGCTAGTTCTTaGGTTTTCTCCCAGACAGTC +
Preference number: 5 (lower is better)
Translates to: GSPPGTQLGQLQNRDEGGFSASS*VFSQTV
Trigger: GACTGTCTGGGAGAAAACCAAAGAACTAGCAGAGAA...CCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGACTGAGGAGAATTGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVTEENC*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCAATTCTCCTCAGT...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGTGTTGGTGGCCACCTTaGGAAATGCCTTGCCACTGT +
Preference number: 5 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVCWWPP*EMPCHC
Trigger: ACAGTGGCAAGGCATTTCCAAAGGTGGCCACCAACA...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CTCCCCACCCGGGACCCAACTTGGTCAGTTACAAAACAGGGACGAAGGCGGGAGTTATGCTGCATCCTGTaGTTCGGAGCAAGTCAGAAG +
Preference number: 5 (lower is better)
Translates to: LPTRDPTWSVTKQGRRRELCCIL*FGASQK
Trigger: CTTCTGACTTGCTCCGAACAACAGGATGCAGCATAA...CTCCCGCCTTCGTCCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GGGACGGGGGCAGGGAGAGTCAGTTCAGATGATCCCCTGATGACAGCTGTCACTATTTTATCCAGTATTTaGGGAACCTGGCAGTGGTCG +
Preference number: 5 (lower is better)
Translates to: GTGAGRVSSDDPLMTAVTILSSI*GTWQWS
Trigger: CGACCACTGCCAGGTTCCCAAAATACTGGATAAAAT...AGTGACAGCTGTCATCAGGGGATCATCTGAACTGACTCTCCCTGCCCCCGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CACAGTGTTGTAGATTGTCTGGGGCCTGGCTGGGAAGTCGTTCTGCTCCACGTGTTCTCTGCTAGTTCTTaGGTTTTCTCCCAGACAGTC +
Preference number: 5 (lower is better)
Translates to: HSVVDCLGPGWEVVLLHVFSASS*VFSQTV
Trigger: GACTGTCTGGGAGAAAACCAAAGAACTAGCAGAGAA...CACGTGGAGCAGAACGACTTCCCAGCCAGGCCCCAGACAATCTACAACACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp CTTCCTTGGGGTGATGCCAAGAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATTTTATCCAGTATTTaGGGAACCTGGCAGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LPWGDAKSFFPWMLSSRSILSSI*GTWQWS
Trigger: CGACCACTGCCAGGTTCCCAAAATACTGGATAAAAT...GCTCCTGGAACTCAGCATCCATGGAAAGAAGCTCTTGGCATCACCCCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS-3UTR CAA 90 bp GAGCTTCTTTCCATGGATGCTGAGTTCCAGGAGCATGAAAATAGAAACCAAAGGCACCCGGGACCCAACTaGGTCAGTTACAAAACAGGG +
Preference number: 5 (lower is better)
Translates to: ELLSMDAEFQEHENRNQRHPGPN*VSYKTG
Trigger: CCCTGTTTTGTAACTGACCAAGTTGGGTCCCGGGTG...CCTTTGGTTTCTATTTTCATGCTCCTGGAACTCAGCATCCATGGAAAGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp CCGGGGATGGGCTCCAGGACCAGCCTCCCCGCGGCCTaGCCGCTGTCCGGGAGCGGTTGCCGGCGGATGGTG +
Preference number: 6 (lower is better)
Translates to: PGMGSRTSLPAA*PLSGSGCRRMV
Trigger: CACCATCCGCCGGCAACCGCTCCCGGACAGCGGCCAGGCCGCGGGGAGGCTGGTCCTGGAGCCCATCCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 72 bp AGGGCCGGGGTCGGGGTTCCCTTCGCGCGACTCCGCTaGAGCCTCCGGGCCTGGGCGTTTATCCCTGCCGTG +
Preference number: 6 (lower is better)
Translates to: RAGVGVPFARLR*SLRAWAFIPAV
Trigger: CACGGCAGGGATAAACGCCCAGGCCCGGAGGCTGCAGCGGAGTCGCGCGAAGGGAACCCCGACCCCGGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp CACCGGGCCTGCCACCGCTGCCCAGCATCGCCGGCTTaGCCCACCACGTCACACAGCACGTACTGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: HRACHRCPASPA*PTTSHSTYWPA
Trigger: GGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CAA 72 bp GCACCGGGCCTGCCACCGCTGCCCAGCATCGCCGGCTaGGCCCACCACGTCACACAGCACGTACTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: APGLPPLPSIAG*AHHVTQHVLAG
Trigger: GCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCGGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CAA 90 bp CACCCGAAAGCACCGGGCCTGCCACCGCTGCCCAGCATCGCCGGCTaGGCCCACCACGTCACACAGCACGTACTGGCCGGCCTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: HPKAPGLPPLPSIAG*AHHVTQHVLAGLPG
Trigger: CCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCGGTGCTTTCGGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS GCA 72 bp TGGCCCACCACGTCACACAGCACGTACTGGCCGGCCTaGCTGGGGTCCAGGGCGTACCGCTCCAGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: WPTTSHSTYWPA*LGSRAYRSSAS
Trigger: GGAGGCGCTGGAGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS GCA 72 bp AGCCTCCCCGCGGCCTGGCCGCTGTCCGGGAGCGGTTaGCGGCGGATGGTGCAGTGTAGAGGCAGGATGTCG +
Preference number: 6 (lower is better)
Translates to: SLPAAWPLSGSG*RRMVQCRGRMS
Trigger: CGACATCCTGCCTCTACACTGCACCATCCGCCGGCAACCGCTCCCGGACAGCGGCCAGGCCGCGGGGAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp TCGCCGGCTTGGCCCACCACGTCACACAGCACGTACTaGCCGGCCTGCCTGGGGTCCAGGGCGTACCGCTCC +
Preference number: 6 (lower is better)
Translates to: SPAWPTTSHSTY*PACLGSRAYRS
Trigger: GGAGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGGGCCAAGCCGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS GCA 72 bp CCTGGCCGCTGTCCGGGAGCGGTTGCCGGCGGATGGTaGAGTGTAGAGGCAGGATGTCGGGGGCTGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PGRCPGAVAGGW*SVEAGCRGLRG
Trigger: GCCTCTCAGCCCCCGACATCCTGCCTCTACACTGCACCATCCGCCGGCAACCGCTCCCGGACAGCGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp CCGACAGCTGGGTGGAGAGCTCGGCGGGGTCATCGCTaGCGCCCAGGCTGGAGAAGGTGGAGTCCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: PTAGWRARRGHR*RPGWRRWSPGP
Trigger: GGGACCTGGACTCCACCTTCTCCAGCCTGGGCGCCAGCGATGACCCCGCCGAGCTCTCCACCCAGCTGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CCA 72 bp CGGCCTGGCCGCTGTCCGGGAGCGGTTGCCGGCGGATaGTGCAGTGTAGAGGCAGGATGTCGGGGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: RPGRCPGAVAGG*CSVEAGCRGLR
Trigger: TCTCAGCCCCCGACATCCTGCCTCTACACTGCACCATCCGCCGGCAACCGCTCCCGGACAGCGGCCAGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS TCA 72 bp CGGGCAGGGCGTTCACTGGGCTCAGGCTGGTCTCACTaGCTGTGCGGCGCAACCGGGGTGGAGGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: RAGRSLGSGWSH*LCGATGVEESS
Trigger: GGAGCTCTCCTCCACCCCGGTTGCGCCGCACAGTCAGTGAGACCAGCCTGAGCCCAGTGAACGCCCTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 72 bp TCCCCAAACACCCGAAAGCACCGGGCCTGCCACCGCTaGCCAGCATCGCCGGCTTGGCCCACCACGTCACAC +
Preference number: 6 (lower is better)
Translates to: SPNTRKHRACHR*PASPAWPTTSH
Trigger: GTGTGACGTGGTGGGCCAAGCCGGCGATGCTGGGCAGCGGTGGCAGGCCCGGTGCTTTCGGGTGTTTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp CCACCACGTCACACAGCACGTACTGGCCGGCCTGCCTaGGGTCCAGGGCGTACCGCTCCAGCGCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: PPRHTARTGRPA*GPGRTAPAPPS
Trigger: TGAAGGAGGCGCTGGAGCGGTACGCCCTGGACCCCAGGCAGGCCGGCCAGTACGTGCTGTGTGACGTGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CAA 72 bp GAGGGGGTCCGCTGGCCCACCGTGTGCCGGTCCCGGTaGAGCACATACACCAGGCTGTCGTGCTGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: EGVRWPTVCRSR*STYTRLSCCWL
Trigger: CAGCCAGCAGCACGACAGCCTGGTGTATGTGCTCAACCGGGACCGGCACACGGTGGGCCAGCGGACCCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399583.4
CDS CAA 72 bp GAGGGGGTCCGCTGGCCCACCGTGTGCCGGTCCCGGTaGAGCACATACACCAGGGTGCTGCTGGCTGTAGCC +
Preference number: 6 (lower is better)
Translates to: EGVRWPTVCRSR*STYTRVLLAVA
Trigger: GGCTACAGCCAGCAGCACCCTGGTGTATGTGCTCAACCGGGACCGGCACACGGTGGGCCAGCGGACCCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445392.5
CDS CCA 72 bp GTTCCCTTCGCGCGACTCCGCTGCAGCCTCCGGGCCTaGGCGTTTATCCCTGCCGTGATGGTGTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: VPFARLRCSLRA*AFIPAVMVSTS
Trigger: GGAGGTGGACACCATCACGGCAGGGATAAACGCCCAGGCCCGGAGGCTGCAGCGGAGTCGCGCGAAGGGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp GAGAGGCTGATGCTGGGCTTGCTGGAGGGGGTCCGCTaGCCCACCGTGTGCCGGTCCCGGTTGAGCACATAC +
Preference number: 6 (lower is better)
Translates to: ERLMLGLLEGVR*PTVCRSRLSTY
Trigger: GTATGTGCTCAACCGGGACCGGCACACGGTGGGCCAGCGGACCCCCTCCAGCAAGCCCAGCATCAGCCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS GCA 72 bp GAGAGCAGGTCCCCGTGGTGCAGCACCACGGTCCTGTaGCCCACCTCGGAGAAGTTGACGGAGATGTGCGCC +
Preference number: 6 (lower is better)
Translates to: ESRSPWCSTTVL*PTSEKLTEMCA
Trigger: GGCGCACATCTCCGTCAACTTCTCCGAGGTGGGGCACAGGACCGTGGTGCTGCACCACGGGGACCTGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp TGGAGAGCTCGGCGGGGTCATCGCTGGCGCCCAGGCTaGAGAAGGTGGAGTCCAGGTCCCGGTACTTGTAGC +
Preference number: 6 (lower is better)
Translates to: WRARRGHRWRPG*RRWSPGPGTCS
Trigger: GCTACAAGTACCGGGACCTGGACTCCACCTTCTCCAGCCTGGGCGCCAGCGATGACCCCGCCGAGCTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CAA 72 bp CGAGGGGGCCTTGGACCTGAGCCTGGAGTTTGGAACTaGGGCATGGACTCTCGGCTCCTTGACTCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: RGGLGPEPGVWN*GMDSRLLDSPA
Trigger: GGCGGGGGAGTCAAGGAGCCGAGAGTCCATGCCCAAGTTCCAAACTCCAGGCTCAGGTCCAAGGCCCCCTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469399.1
CDS CAA 90 bp GTGAGGGAACGAGGGGGCCTTGGACCTGAGCCTGGAGTTTGGAACTaGGGCATGGACTCTCGGCTCCTTGACTCCCCCGCCGAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: VRERGGLGPEPGVWN*GMDSRLLDSPAEEV
Trigger: GACCTCCTCGGCGGGGGAGTCAAGGAGCCGAGAGTCCATGCCCAAGTTCCAAACTCCAGGCTCAGGTCCAAGGCCCCCTCGTTCCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469399.1
CDS TCA 72 bp CTCCGGCTCCGTGAGGGAACGAGGGGGCCTTGGACCTaGGCCTGGAGTTTGGAACTTGGGCATGGACTCTCG +
Preference number: 6 (lower is better)
Translates to: LRLREGTRGPWT*AWSLELGHGLS
Trigger: CGAGAGTCCATGCCCAAGTTCCAAACTCCAGGCTCAGGTCCAAGGCCCCCTCGTTCCCTCACGGAGCCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469399.1
CDS CCA 72 bp AACGTCATGATCCTCTGCAGCAGCGTGTCCTCCAGGTaGGGCTCAAACTCCAGGAGCAGCTGCTGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: NVMILCSSVSSR*GSNSRSSCWRR
Trigger: CCGGCGCCAGCAGCTGCTCCTGGAGTTTGAGCCCCACCTGGAGGACACGCTGCTGCAGAGGATCATGACGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399583.4
ENST00000445392.5
CDS CCA 72 bp GCTGCAAGTCTGGAACCAGATCAGCCATGGCGCAGCTaGCCAGCGAGATGGGCTCAGTTGCGCCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: AASLEPDQPWRS*PARWAQLRLLL
Trigger: GAGAAGCAGGCGCAACTGAGCCCATCTCGCTGGCCAGCTGCGCCATGGCTGATCTGGTTCCAGACTTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473130.5
CDS CCA 72 bp GTCCACCTGGAAGCCGTCGCTGGGCAGGACGATGGGTaGGGGGTTTTCGTAGGACTCCAGAACATCCTCTGC +
Preference number: 6 (lower is better)
Translates to: VHLEAVAGQDDG*GVFVGLQNILC
Trigger: GCAGAGGATGTTCTGGAGTCCTACGAAAACCCCCCACCCATCGTCCTGCCCAGCGACGGCTTCCAGGTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472999.5
CDS TCA 72 bp CCGACCACCCGGTGTGACATCCGAGCAGTTCAGGACTaGGAACAAGGCCTTGTAGCCAGGAACCCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PTTRCDIRAVQD*EQGLVARNPPA
Trigger: GGCTGGAGGGTTCCTGGCTACAAGGCCTTGTTCTCAGTCCTGAACTGCTCGGATGTCACACCGGGTGGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472999.5
CDS CCA 72 bp AGGGAACGAGGGGGCCTTGGACCTGAGCCTGGAGTTTaGAACTTGGGCATGGACTCTCGGCTCCTTGACTCC +
Preference number: 6 (lower is better)
Translates to: RERGGLGPEPGV*NLGMDSRLLDS
Trigger: GGAGTCAAGGAGCCGAGAGTCCATGCCCAAGTTCCAAACTCCAGGCTCAGGTCCAAGGCCCCCTCGTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469399.1
CDS GCA 72 bp TGCCGGTGGCCAGGACGCTCTTGTAGTGGGTTCCTGTaGAGACACTGTCCCCAAACACCTTCAGGACACCAG +
Preference number: 6 (lower is better)
Translates to: CRWPGRSCSGFL*RHCPQTPSGHQ
Trigger: CTGGTGTCCTGAAGGTGTTTGGGGACAGTGTCTGCACAGGAACCCACTACAAGAGCGTCCTGGCCACCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CCA 72 bp CCCGGTACTTGTAGCTCAGCGTCCGGGACAGCATGCTaGACAACAGCTGGCTCTGCCGCTTCAGTTTGCTCT +
Preference number: 6 (lower is better)
Translates to: PGTCSSASGTAC*TTAGSAASVCS
Trigger: AGAGCAAACTGAAGCGGCAGAGCCAGCTGTTGTCCAGCATGCTGTCCCGGACGCTGAGCTACAAGTACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399583.4
ENST00000445392.5
ENST00000457174.1
CDS CAA 90 bp AGCGAGATGGGCTCCTGGAGTTGCGCCTGCTTCTCTGCTAGTTCTTaGGTTTTCTCCTACAATTACAAAGCGGGAGAAAAAGCAAGTGAG +
Preference number: 6 (lower is better)
Translates to: SEMGSWSCACFSASS*VFSYNYKAGEKASE
Trigger: CTCACTTGCTTTTTCTCCCGCTTTGTAATTGTAGGAGAAAACCAAAGAACTAGCAGAGAAGCAGGCGCAACTCCAGGAGCCCATCTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484211.1