RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAD54L (Homo sapiens)

Ensembl gene IDs: ENSG00000085999

Ensembl transcript IDs: ENST00000371975.9, ENST00000442598.5, ENST00000459678.2, ENST00000463715.5, ENST00000472889.2, ENST00000473251.2, ENST00000476687.2, ENST00000487700.1, ENST00000488942.5, ENST00000493032.5, ENST00000655446.1, ENST00000657122.1, ENST00000661174.1, ENST00000661701.1, ENST00000664182.1, ENST00000668390.1, ENST00000668565.1, ENST00000671528.1

Found 630 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGGAGCCCCCACTTATCAGTGCAGTGGTTCCACCCTGCCAGGTCTaGAGTGCAGTCAGAACCATCAGGGGGTGGCCGGATCTGACGGCT +
Preference number: 1 (lower is better)
Translates to: PEPPLISAVVPPCQV*SAVRTIRGWPDLTA
Trigger: AGCCGTCAGATCCGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGCTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR TCA 90 bp ACACCCAGACCAGCTGGTTATCAGCGGAGGCCCCGCTGCTCCTCATaGGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: TPRPAGYQRRPRCSS*ERWWKTKVMAVEAA
Trigger: TGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR GCA 90 bp CCCAGGCAGCCTGGAGTACCTCATCCCGGAGCCCCCACTTATCAGTaGAGTGGTTCCACCCTGCCAGGTCTGAAGTGCAGTCAGAACCAT +
Preference number: 1 (lower is better)
Translates to: PRQPGVPHPGAPTYQ*SGSTLPGLKCSQNH
Trigger: ATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGCTCCGGGATGAGGTACTCCAGGCTGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR CCA 90 bp GCAGCCTGGAGTACCTCATCCCGGAGCCCCCACTTATCAGTGCAGTaGTTCCACCCTGCCAGGTCTGAAGTGCAGTCAGAACCATCAGGG +
Preference number: 1 (lower is better)
Translates to: AAWSTSSRSPHLSVQ*FHPARSEVQSEPSG
Trigger: CCCTGATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGCTCCGGGATGAGGTACTCCAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR CCA 90 bp TGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATCCCAGGCAGCCTaGAGTACCTCATCCCGGAGCCCCCACTTATCAGTGCAGTGGTTC +
Preference number: 1 (lower is better)
Translates to: WKTKVMAVEAASQAA*STSSRSPHLSVQWF
Trigger: GAACCACTGCACTGATAAGTGGGGGCTCCGGGATGAGGTACTCCAGGCTGCCTGGGATGCTGCCTCCACTGCCATCACCTTCGTCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR TCA 90 bp GCCAGGTCTGAAGTGCAGTCAGAACCATCAGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGTGTG +
Preference number: 1 (lower is better)
Translates to: ARSEVQSEPSGGGRI*RLLTQRRQCNLSCV
Trigger: CACACATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR TCA 90 bp TGCTCCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCCTCAATGGTCCCTGCAGACAGCAGG +
Preference number: 1 (lower is better)
Translates to: CSSSTTQLLSAFLWL*RWKIFSSMVPADSR
Trigger: CCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR GCA 90 bp AACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGCGCTCTACATCCTaGTCCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTC +
Preference number: 1 (lower is better)
Translates to: NSSFNSPREKWRSTS*SSSTTQLLSAFLWL
Trigger: GAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGAGTTGAAGGAGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR GCA 90 bp GTGGCGCTCTACATCCTGCTCCTCATCCACCACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGT +
Preference number: 1 (lower is better)
Translates to: VALYILLLIHHTAAQ*LLVALTLEDLLLNG
Trigger: ACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR CCA 90 bp GCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTaGCGCTCTACATCCTGCTCCTCATCCACCACACAGCTGCTCAGT +
Preference number: 1 (lower is better)
Translates to: ASSRINSSFNSPREK*RSTSCSSSTTQLLS
Trigger: ACTGAGCAGCTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR GCA 90 bp GATCCAAAGTCTGGGTGTAATTCGACACCAGCACTACTTTGTCACTaGTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCA +
Preference number: 1 (lower is better)
Translates to: DPKSGCNSTPALLCH*YGFGSPPEYNPGPA
Trigger: TGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTACACCCAGACTTTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR CCA 90 bp GACACCACCACTGCCTTGTCAATTTCTGGCTTGCACTCTGGACTCTaGCGTAAAAGTGTCCACATCAATGTGATGCACTGCAGCGTCTTT +
Preference number: 1 (lower is better)
Translates to: DTTTALSISGLHSGL*RKSVHINVMHCSVF
Trigger: AAAGACGCTGCAGTGCATCACATTGATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CCA 90 bp TTTTGGTCTATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTTaGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTTC +
Preference number: 1 (lower is better)
Translates to: FWSISSLDPPSMARG*ILPPSHFPTSLYQF
Trigger: GAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAATAGACCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CCA 90 bp GAATTAACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTaGATGGGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAG +
Preference number: 1 (lower is better)
Translates to: ELTKCTKLKYSSRSF*MGVPEMSTRRLVFK
Trigger: CTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTGTTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR GCA 90 bp TCACTAGCAGCAGCGTCTCGACCCTTCAAAATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCAGTCCCTAGGATGCCGGAATTAACA +
Preference number: 1 (lower is better)
Translates to: SLAAASRPFKIGNSK*FLNSWAVPRMPELT
Trigger: TGTTAATTCCGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAGACGCTGCTGCTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR CCA 90 bp AGGGGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCTCGCCCAGAGAGAAGTaGCGCTCTACATCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RGWPDLTAVDTTSAVQPVSPREK*RSTSCS
Trigger: GGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGA...GACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR TCA 90 bp GGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACCTGACAGCTGGGGCTTGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: GSPPEYNPGPASYLTAGAWEFRR*APAGWC
Trigger: ACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCA...AGCCCCAGCTGTCAGGTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp CCTGCTCCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: PAPHPPHSCSVPSCGSDAGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...AGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp CAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACAGAACCAAGGGCCAGACCCGGGCCATaGCTTGTTCATCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: QASAGHERSAGEAHTEPRARPGP*LVHHWL
Trigger: CAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGC...CCTTGGTTCTGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CAA 90 bp TCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGTCCCTCGTC +
Preference number: 2 (lower is better)
Translates to: SGDEHPPAGVQAVQG*VSLILRVLEPVSLV
Trigger: GACGAGGGACACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR CAA 90 bp ATGGCCAGAGGTTGGATCCTCCCTCCGAGCCATTTCCCAACCTCATaGTACCAGTTCTTCACCAGGCTGGAAGGCGACACCACCACTGCC +
Preference number: 2 (lower is better)
Translates to: MARGWILPPSHFPTS*YQFFTRLEGDTTTA
Trigger: GGCAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGATCAGGCATCTCAAGTaGTCCACTCGCCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GWPDLTAVDTTSAVQPVMIRHLK*STRLSF
Trigger: GAAGCTGAGGCGAGTGGATCACTTGAGATGCCTGAT...CATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661701.1
3UTR-3UTR TCA 90 bp CCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGAGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 2 (lower is better)
Translates to: PHPPHSCSVPSCGSDAGRAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...TCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR TCA 90 bp CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATCGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 2 (lower is better)
Translates to: LLMRTLVEDEGDGSGGSIAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp CCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGTGTGTCTGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 2 (lower is better)
Translates to: PDLTAVDTTSAVQPVMCVWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...GACACACATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATCTGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 2 (lower is better)
Translates to: LLMRTLVEDEGDGSGGSIWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp GAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGCCATGATGCAGCCATaGCTGCCAGGGATGCGCCGA +
Preference number: 2 (lower is better)
Translates to: EASFIQDKQLLQLAQREVAMMQP*LPGMRR
Trigger: TCGGCGCATCCCTGGCAGCCATGGCTGCATCATGGC...CACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp GTAATTCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VIRHQHYFVTATASGHRQAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...CTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR TCA 90 bp CACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGAAACCGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: HSSCPQAILLPVWLVSETDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...GGTTTCTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp GGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACCTGACAGCTGGGGCTCTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 2 (lower is better)
Translates to: GSPPEYNPGPASYLTAGALLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...AGCCCCAGCTGTCAGGTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp GGGTGTAATTCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGTTCAACAGGGCCCTGTaGAGCAAGGAGCCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: GCNSTPALLCHCYGFGSPFNRAL*SKEPLF
Trigger: GAAAAGGGGCTCCTTGCTCCACAGGGCCCTGTTGAA...CGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp GAGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCACCCTGGCTCCACGCTaGTTCATGAATCCTTACGTA +
Preference number: 2 (lower is better)
Translates to: EHPPAGVQAVQGLVSLILTLAPR*FMNPYV
Trigger: TACGTAAGGATTCATGAACCAGCGTGGAGCCAGGGT...GAGAATCAGACTTACCAAGCCCTGGACAGCTTGAACACCAGCCGGCGGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
3UTR-3UTR CCA 90 bp TGGATGGGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 2 (lower is better)
Translates to: WMGVPEMSTRRLVFKLSRILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...CCTGGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR TCA 90 bp CAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: QTAGGRYSKSSFDHLARPGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...GGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR TCA 90 bp CACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCGATTCTCAGAGTTCTTaGGCCTGTGTCCCTCGTCAC +
Preference number: 2 (lower is better)
Translates to: HTAAQCLLVALTLEDLLLDSQSS*ACVPRH
Trigger: GTGACGAGGGACACAGGCTCAAGAACTCTGAGAATC...GAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp TACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGTATTCACAATGCTGGTaGGCTCCCGCAGCCGCTCCT +
Preference number: 2 (lower is better)
Translates to: YFVTATASGHRQNIIQDQYSQCW*APAAAP
Trigger: AGGAGCGGCTGCGGGAGCTCACCAGCATTGTGAATA...CTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR GCA 90 bp GCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGCGCTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 2 (lower is better)
Translates to: ASFIQDKQLLQLAQREVALLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...CGCCACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp GCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTCACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: AAQCLLVALTLEDLLLNGHTAAQ*LLVALT
Trigger: CGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG...ACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp CTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACATGCTTCATGCTGACTaGTGTCCAGACAAGGTGGTT +
Preference number: 2 (lower is better)
Translates to: LIQNQGIFFQGVMEGPADMLHAD*CPDKVV
Trigger: AACCACCTTGTCTGGACAGCAGTCAGCATGAAGCAT...GTCCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657122.1
3UTR-3UTR CCA 90 bp GTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGCCAGACCCGGGCCATaGCTTGTTCATCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: VSLRLASSRINSSFNSPRARPGP*LVHHWL
Trigger: CAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGC...TCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp GCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCGGGCCAAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: AGGRYSKSSFDHLARPGPRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...TGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR CAA 90 bp AATGGTCCCTGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCGGGCCATGGCTTGTTCATCATTGGC +
Preference number: 2 (lower is better)
Translates to: NGPCRQQAVDIASLL*TISPDPGHGLFIIG
Trigger: GCCAATGATGAACAAGCCATGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCAGGGACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR TCA 90 bp AGGGGTGTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: RGVSLQQTTCSIFTGRYLDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...TAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGACACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR TCA 90 bp AGACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGGGATGCGCCGACTGGTaGCACACTCCCACAGGAATT +
Preference number: 2 (lower is better)
Translates to: RHTHLALKQFFCRFGLSQGCADW*HTPTGI
Trigger: AATTCCTGTGGGAGTGTGTCACCAGTCGGCGCATCC...CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR GCA 90 bp GTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGACATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: VTEASFIQDKQLLQLAQRHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...TCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp TACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGTTCAACAGGGCCCTGTaGAGCAAGGAGCCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: YFVTATASGHRQNIIQDQFNRAL*SKEPLF
Trigger: GAAAAGGGGCTCCTTGCTCCACAGGGCCCTGTTGAA...CTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp CACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCTGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: HTAAQCLLVALTLEDLLLWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...GAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp GTTTCTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATAAACACTCCTGGATCTaGGTCTCACTGCTGGATTTC +
Preference number: 2 (lower is better)
Translates to: VSPCQASAGHERSAGEAHKHSWI*VSLLDF
Trigger: GAAATCCAGCAGTGAGACCCAGATCCAGGAGTGTTT...ATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657122.1
3UTR-3UTR CCA 90 bp TTGGCTCGCTTCTTAATGGACATCGTGCCATCCAGGCGGACGTATAAGTACCTTTCGATGGCCAGAGGTTaGATCCTCCCTCCGAGCCAT +
Preference number: 2 (lower is better)
Translates to: LARFLMDIVPSRRTYKYLSMARG*ILPPSH
Trigger: ATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGA...AAGGTACTTATACGTCCGCCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CAA 90 bp ACCAGGCTGGAAGGCGACACCACCACTGCCTTGTCAATTTCTGGCTaGCACTCTGGACTCTGGCGTAAAAGTGTCCACATCAATGTGATG +
Preference number: 2 (lower is better)
Translates to: TRLEGDTTTALSISG*HSGLWRKSVHINVM
Trigger: CATCACATTGATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCTTCCAGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CAA 90 bp TTGTACCAGTTCTTCACCAGGCTGGAAGGCGACACCACCACTGCCTaGTCAATTTCTGGCTTGCACTCTGGACTCTGGCGTAAAAGTGTC +
Preference number: 2 (lower is better)
Translates to: LYQFFTRLEGDTTTA*SISGLHSGLWRKSV
Trigger: GACACTTTTACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACTGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR GCA 90 bp CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATCCTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLMRTLVEDEGDGSGGSILQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp CCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGAATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 2 (lower is better)
Translates to: PHPPHSCSVPSCGSDAGRILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...TCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp AGGCTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACAAGGTGGTTGATTaGTTAGCTGACTCAAAGGTT +
Preference number: 2 (lower is better)
Translates to: RLIQNQGIFFQGVMEGPADKVVD*LADSKV
Trigger: AACCTTTGAGTCAGCTAACCAATCAACCACCTTGTC...CGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657122.1
3UTR-3UTR TCA 90 bp TACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGGTCCCTCGTCACATATaGCCAGACCAACACTTCCTT +
Preference number: 2 (lower is better)
Translates to: YFVTATASGHRQNIIQDQVPRHI*PDQHFL
Trigger: AAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGAC...CTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp CCCCAGCCCTTTTCAGGCCCAATGCTCGAGAGCCCAGAGGACCTTGATAATTTGATAAATGCTTCATGCTaGCTGCTGTCCAGACAAGGT +
Preference number: 2 (lower is better)
Translates to: PQPFSGPMLESPEDLDNLINASC*LLSRQG
Trigger: ACCTTGTCTGGACAGCAGTCAGCATGAAGCATTTAT...CAAATTATCAAGGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGGGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657122.1
3UTR-3UTR GCA 90 bp TACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACCTGACAATCAATGTGATGCACTaGAGCGTCTTTCCTAGGCCC +
Preference number: 2 (lower is better)
Translates to: YGFGSPPEYNPGPASYLTINVMH*SVFPRP
Trigger: GGGCCTAGGAAAGACGCTGCAGTGCATCACATTGAT...TGTCAGGTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR GCA 90 bp TGTAATTCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCATGTCAATTTCTGGCTTaGACTCTGGACTCTGGCGTA +
Preference number: 2 (lower is better)
Translates to: CNSTPALLCHCYGFGSPPCQFLA*TLDSGV
Trigger: TACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACA...TGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CCA 90 bp GCTCGATGGACTATTGAAGCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATGCCAGACCCGGGCCATaGCTTGTTCATCATTGGCTG +
Preference number: 2 (lower is better)
Translates to: ARWTIEAFYNLGSLLNGHARPGP*LVHHWL
Trigger: CAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGC...ATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp GTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: VQAVQGLVSLILRVLEPVRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...CACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CAA 90 bp AAGACAAAGTCAGGGCTCGATGGACTATTGAAGCGTTCTACAACCTaGGCTCGCTTCTTAATGGACATCGTGCCATCCAGGCGGACGTAT +
Preference number: 2 (lower is better)
Translates to: KTKSGLDGLLKRSTT*ARFLMDIVPSRRTY
Trigger: ATACGTCCGCCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCCTGACTTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR TCA 90 bp GGAATTAACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTGGATGGGAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GINKMYQAEILKQIILDGSFSWS*ALSGGG
Trigger: GCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCT...CCCATCCAGAATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTGTTAATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp GTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGCTCCACGCTGGTTCATaGATCCTTCCAGCTTTTGGT +
Preference number: 2 (lower is better)
Translates to: VQAVQGLVSLILRVLEPVLHAGS*ILPAFG
Trigger: ACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAG...CACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR GCA 90 bp GCTCGATGGACTATTGAAGCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATCACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: ARWTIEAFYNLGSLLNGHHTAAQ*LLVALT
Trigger: CGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG...ATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp GTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGACTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 2 (lower is better)
Translates to: VSLRLASSRINSSFNSPRLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...TCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp AGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCCAGCTTTTGGTCTATAGGCGACACCACCACTaGCTTGTCAATTTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: RRHPGSTLVHESFQLLVYRRHHH*LVNFWL
Trigger: AAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCT...ATAGACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CCA 90 bp GAAAGGATATCAGAAGTCCTCCGTATCAGGCATCTATTCACAATGCTGGTGAGCAGTTCTTCACCAGGCTaGAAGGCGACACCACCACTG +
Preference number: 2 (lower is better)
Translates to: ERISEVLRIRHLFTMLVSSSSPG*KATPPL
Trigger: CAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACT...GCTCACCAGCATTGTGAATAGATGCCTGATACGGAGGACTTCTGATATCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CAA 90 bp CTTTTGGTCTATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTaGGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTT +
Preference number: 2 (lower is better)
Translates to: LLVYFILRSSIDGQR*DPPSEPFPNLIVPV
Trigger: AACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAATAGACCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR GCA 90 bp GTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGACTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: VTEASFIQDKQLLQLAQRLQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...TCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp TCTCCTAGCTGCCTGTCTGCCTCACTAGCAGCAGCGTCTCGACCCTTCAAAATTAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 2 (lower is better)
Translates to: SPSCLSASLAAASRPFKIKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...AATTTTGAAGGGTCGAGACGCTGCTGCTAGTGAGGCAGACAGGCAGCTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR GCA 90 bp GTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 2 (lower is better)
Translates to: VSLRLASSRINSSFNSPRKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...TCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp ATTGAAGCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATCGTGCCATCCAGTTGCACTCTGGACTCTaGCGTAAAAGTGTCCACATC +
Preference number: 2 (lower is better)
Translates to: IEAFYNLGSLLNGHRAIQLHSGL*RKSVHI
Trigger: GATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAA...CTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATTCAACAGGGCCCTGTaGAGCAAGGAGCCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: ILGKHHAALLDDFLPENKFNRAL*SKEPLF
Trigger: GAAAAGGGGCTCCTTGCTCCACAGGGCCCTGTTGAA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
3UTR-3UTR CCA 90 bp TGTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: CQPTTNDLLNLHRQIFRKRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...CTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CCA 90 bp AGCTTTTGGTCTATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTTGGATCTGCCTTGTCAATTTCTaGCTTGCACTCTGGACTCTG +
Preference number: 2 (lower is better)
Translates to: SFWSISSLDPPSMARGWICLVNF*LALWTL
Trigger: CAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCA...GATCCAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAATAGACCAAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp AACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTGGATGGGAGTTCCGATTCTCAGAGTTCTTaGGCCTGTGTCCCTCGTCAC +
Preference number: 2 (lower is better)
Translates to: NKMYQAEILKQIILDGSSDSQSS*ACVPRH
Trigger: GTGACGAGGGACACAGGCTCAAGAACTCTGAGAATC...GGAACTCCCATCCAGAATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR TCA 90 bp CAGAGGTTGGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTTCTTCAAAATGTACCAAGCTaGAATACTCAAGCAGATCAT +
Preference number: 2 (lower is better)
Translates to: QRLDPPSEPFPNLIVPVLQNVPS*NTQADH
Trigger: ATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTG...AAGAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR TCA 90 bp AGACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGATTCAAAATGCTTCTTaGATTCATGGGCAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: RHTHLALKQFFCRFGLSQIQNAS*IHGQSL
Trigger: TAGGGACTGCCCATGAATTCAAGAAGCATTTTGAAT...CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR CCA 90 bp CTGGTTCATGAATCCTTCCAGCTTTTGGTCTATTTCATCCTTAGATCCTCCATCTGCTTCTTGAATTCATaGGCAGTCCCTAGGATGCCG +
Preference number: 2 (lower is better)
Translates to: LVHESFQLLVYFILRSSICFLNS*AVPRMP
Trigger: CGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCA...GATGGAGGATCTAAGGATGAAATAGACCAAAAGCTGGAAGGATTCATGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CCA 90 bp AACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTTGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: NDLLNLHRQIFRKDIRSPWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...AGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR GCA 90 bp GTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCA +
Preference number: 2 (lower is better)
Translates to: VQAVQGLVSLILRVLEPVIGNSK*FLNSWA
Trigger: TGCCCATGAATTCAAGAAGCATTTTGAATTGCCAAT...CACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR CCA 90 bp GTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGTCGACCCTTCAAAATTaGCAATTCAAAATGCTTCTT +
Preference number: 2 (lower is better)
Translates to: VQAVQGLVSLILRVLEPVSTLQN*QFKMLL
Trigger: AAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGA...CACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR TCA 72 bp CCAGCTGGTTATCAGCGGAGGCCCCGCTGCTCCTCATaGGAACGCTGGTGGAAGACGAAGGTGATGGCAGTG +
Preference number: 3 (lower is better)
Translates to: PAGYQRRPRCSS*ERWWKTKVMAV
Trigger: CACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR TCA 72 bp GAAGTGCAGTCAGAACCATCAGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGTCGGCAGTGCAACCTG +
Preference number: 3 (lower is better)
Translates to: EVQSEPSGGGRI*RLLTQRRQCNL
Trigger: CAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCTGACTGCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR GCA 72 bp GAGGGCCCGGCGGACCCCAGCCCTTTTCAGGCCCAATaGTCGAGAGCCCAGAGGACCTTGATAATTTGGAAT +
Preference number: 3 (lower is better)
Translates to: EGPADPSPFQAQ*SRAQRTLIIWN
Trigger: ATTCCAAATTATCAAGGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGGGCTGGGGTCCGCCGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657122.1
3UTR-3UTR CAA 90 bp CTATCTCCTTCCTCTAAGAGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCATCGATGGCCAGAGGTaGGATCCTCCCTCCGAGCCA +
Preference number: 3 (lower is better)
Translates to: LSPSSKSYTQTSWLSAEAIDGQR*DPPSEP
Trigger: TGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGAT...GGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCTCTTAGAGGAAGGAGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR TCA 72 bp CAGAACCATCAGGGGGTGGCCGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCAACCTGTCATGTGTGT +
Preference number: 3 (lower is better)
Translates to: QNHQGVAGSDGC*HNVGSATCHVC
Trigger: ACACACATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR TCA 72 bp ACTCAAGCAGATCATTCTGGATGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: TQADHSGWEFRR*APAGWCSSCPG
Trigger: CCCTGGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAATGATCTGCTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR TCA 72 bp CCACTTATCAGTGCAGTGGTTCCACCCTGCCAGGTCTaGAGTGCAGTCAGAACCATCAGGGGGTGGCCGGAT +
Preference number: 3 (lower is better)
Translates to: PLISAVVPPCQV*SAVRTIRGWPD
Trigger: ATCCGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGGAACCACTGCACTGATAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR GCA 72 bp GGCGCTCTACATCCTGCTCCTCATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: GALHPAPHPPHS*SVPSCGSDAGR
Trigger: TCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR GCA 72 bp TATCAGTGCAGTGGTTCCACCCTGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGGGTGGCCGGATCTGAC +
Preference number: 3 (lower is better)
Translates to: YQCSGSTLPGLK*SQNHQGVAGSD
Trigger: GTCAGATCCGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGGAACCACTGCACTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp CACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCGACCCGGGCCATGGCTaGTTCATCATTGGCTGGGTT +
Preference number: 3 (lower is better)
Translates to: HTAAQCLLVALTLEDLLLDPGHG*FIIGWV
Trigger: AACCCAGCCAATGATGAACAAGCCATGGCCCGGGTC...GAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR TCA 72 bp AAGTCCTCCGTATCAGGCATCTATTCACAATGCTGGTaGGCTCCCGCAGCCGCTCCTCTCCTAGCTGCCTGT +
Preference number: 3 (lower is better)
Translates to: KSSVSGIYSQCW*APAAAPLLAAC
Trigger: ACAGGCAGCTAGGAGAGGAGCGGCTGCGGGAGCTCACCAGCATTGTGAATAGATGCCTGATACGGAGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR GCA 72 bp TTCAACTCGCCCAGAGAGAAGTGGCGCTCTACATCCTaGTCCTCATCCACCACACAGCTGCTCAGTGCCTTC +
Preference number: 3 (lower is better)
Translates to: FNSPREKWRSTS*SSSTTQLLSAF
Trigger: GAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGAGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR CCA 72 bp AGTACCTCATCCCGGAGCCCCCACTTATCAGTGCAGTaGTTCCACCCTGCCAGGTCTGAAGTGCAGTCAGAA +
Preference number: 3 (lower is better)
Translates to: STSSRSPHLSVQ*FHPARSEVQSE
Trigger: TTCTGACTGCACTTCAGACCTGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGCTCCGGGATGAGGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR CCA 72 bp CTATCTCCTTCCTCTAAGAGCTACACCCAGACCAGCTaGTTATCAGCGGAGGCCCCGCTGCTCCTCATGAGA +
Preference number: 3 (lower is better)
Translates to: LSPSSKSYTQTS*LSAEAPLLLMR
Trigger: TCTCATGAGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCTCTTAGAGGAAGGAGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp CTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACAGAGCCCAGAGGACCTaGATAATTTGGAATGGGGAC +
Preference number: 3 (lower is better)
Translates to: LIQNQGIFFQGVMEGPADRAQRT*IIWNGD
Trigger: GTCCCCATTCCAAATTATCAAGGTCCTCTGGGCTCT...GTCCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000657122.1
3UTR TCA 72 bp TCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCCTCAATGGTCCCTGCA +
Preference number: 3 (lower is better)
Translates to: STTQLLSAFLWL*RWKIFSSMVPA
Trigger: TGCAGGGACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR GCA 72 bp CCAGTTCTTCACCAGGCTGGAAGGCGACACCACCACTaGCTTGTCAATTTCTGGCTTGCACTCTGGACTCTG +
Preference number: 3 (lower is better)
Translates to: PVLHQAGRRHHH*LVNFWLALWTL
Trigger: CAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CAA 90 bp CCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGAACAGGGAGTTTCTCCTaGTCAAGCTTCAGCTGGTCA +
Preference number: 3 (lower is better)
Translates to: PHPPHSCSVPSCGSDAGRTGSFS*SSFSWS
Trigger: TGACCAGCTGAAGCTTGACAAGGAGAAACTCCCTGT...TCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CAA 90 bp AGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGG +
Preference number: 3 (lower is better)
Translates to: SCSVPSCGSDAGRSSPQWMACSS*AGFQSG
Trigger: CCCTGACTGGAACCCAGCCAATGATGAACAAGCCAT...CCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp AGACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGGACCCGGGCCATGGCTaGTTCATCATTGGCTGGGTT +
Preference number: 3 (lower is better)
Translates to: RHTHLALKQFFCRFGLSQDPGHG*FIIGWV
Trigger: AACCCAGCCAATGATGAACAAGCCATGGCCCGGGTC...CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp GAAGTCCTCCGTATCAGGCATCTATTCACAATGCTGGTGAGCTCCCGCAGCCGCTTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 3 (lower is better)
Translates to: EVLRIRHLFTMLVSSRSRFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...GCGGCTGCGGGAGCTCACCAGCATTGTGAATAGATGCCTGATACGGAGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR CAA 90 bp GCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 3 (lower is better)
Translates to: AAQCLLVALTLEDLLLNGIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...ACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp CACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 3 (lower is better)
Translates to: HCYGFGSPPEYNPGPASYIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...GTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp TGGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTTCTTCACCAGGCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGA +
Preference number: 3 (lower is better)
Translates to: WILPPSHFPTSLYQFFTRQAVQG*VSLILR
Trigger: TCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTG...CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CAA 90 bp TATCTCCTTCCTCTAAGAGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCCGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 3 (lower is better)
Translates to: YLLPLRATPRPAGYQRRPEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...GGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCTCTTAGAGGAAGGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp GTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGGGCTCGATGGACTATaGAAGCGTTCTACAACCTTG +
Preference number: 3 (lower is better)
Translates to: VSLRLASSRINSSFNSPRGLDGL*KRSTTL
Trigger: CAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCC...TCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR CCA 72 bp ATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTaGTTCATGAATCCTTACGTAAGAAAGCAGCAGGCT +
Preference number: 3 (lower is better)
Translates to: MMRMGEDTLAPR*FMNPYVRKQQA
Trigger: AGCCTGCTGCTTTCTTACGTAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
3UTR CCA 72 bp ATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTTaGATCCTCCCTCCGAGCCATTTCCCAACCTCATTG +
Preference number: 3 (lower is better)
Translates to: ISSLDPPSMARG*ILPPSHFPTSL
Trigger: CAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CAA 90 bp CACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGAAACCCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGA +
Preference number: 3 (lower is better)
Translates to: HSSCPQAILLPVWLVSETQAVQG*VSLILR
Trigger: TCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTG...GGTTTCTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR-3UTR CAA 90 bp CCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGAAATTCAAAATGCTTCTaGAATTCATGGGCAGTCCCT +
Preference number: 3 (lower is better)
Translates to: PHPPHSCSVPSCGSDAGRNSKCF*NSWAVP
Trigger: AGGGACTGCCCATGAATTCAAGAAGCATTTTGAATT...TCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CAA 90 bp TACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 3 (lower is better)
Translates to: YFVTATASGHRQNIIQDQNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...CTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp TACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATTTCCCAACCTCATaGTACCAGTTCTTCACCAGG +
Preference number: 3 (lower is better)
Translates to: YFVTATASGHRQNIIQDQHFPTS*YQFFTR
Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATG...CTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR GCA 72 bp TCTGGGTGTAATTCGACACCAGCACTACTTTGTCACTaGTACGGCTTCGGGTCACCGCCAGAATATAATCCA +
Preference number: 3 (lower is better)
Translates to: SGCNSTPALLCH*YGFGSPPEYNP
Trigger: TGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTACACCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp CTATCTCCTTCCTCTAAGAGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCGAATCCTTCCAGCTTTaGGTCTATTTCATCCTTAGA +
Preference number: 3 (lower is better)
Translates to: LSPSSKSYTQTSWLSAEAESFQL*VYFILR
Trigger: TCTAAGGATGAAATAGACCAAAAGCTGGAAGGATTC...GGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCTCTTAGAGGAAGGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR GCA 72 bp GCAGCGTCTCGACCCTTCAAAATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCAGTCCCTAGGATGCCG +
Preference number: 3 (lower is better)
Translates to: AASRPFKIGNSK*FLNSWAVPRMP
Trigger: CGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAGACGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR CCA 72 bp ACTGCCTTGTCAATTTCTGGCTTGCACTCTGGACTCTaGCGTAAAAGTGTCCACATCAATGTGATGCACTGC +
Preference number: 3 (lower is better)
Translates to: TALSISGLHSGL*RKSVHINVMHC
Trigger: GCAGTGCATCACATTGATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CCA 72 bp ATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTaGTTCATGAATCCTTCCAGCTTTTGGTCTATTTCA +
Preference number: 3 (lower is better)
Translates to: MMRMGEDTLAPR*FMNPSSFWSIS
Trigger: TGAAATAGACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CAA 90 bp TCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATCTCGACCCTTCAAAATaGGCAATTCAAAATGCTTCT +
Preference number: 3 (lower is better)
Translates to: STPALLCHCYGFGSPPEYLDPSK*AIQNAS
Trigger: AGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAG...ATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR TCA 72 bp TTGGCTTGTCTCAGAAACCTCTTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAACAAACGACCTGCTCA +
Preference number: 3 (lower is better)
Translates to: LACLRNLLYNSV*RGVSLQQTTCS
Trigger: TGAGCAGGTCGTTTGTTGTAGGCTGACACCCCTTCAGACTGAGTTATACAAGAGGTTTCTGAGACAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
3UTR CCA 72 bp CTTCATGCTGACTGCTGTCCAGACAAGGTGGTTGATTaGTTAGCTGACTCAAAGGTTTCCGAAAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: LHADCCPDKVVD*LADSKVSEKET
Trigger: TGTCTCCTTTTCGGAAACCTTTGAGTCAGCTAACCAATCAACCACCTTGTCTGGACAGCAGTCAGCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657122.1
3UTR-3UTR CAA 90 bp GAAAGGATATCAGAAGTCCTCCGTATCAGGCATCTATTCACAATGCTGGTGAGCATCATGCAGCCCTTCTaGATGATTTTCTCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: ERISEVLRIRHLFTMLVSIMQPF*MIFSQR
Trigger: TCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGAT...GCTCACCAGCATTGTGAATAGATGCCTGATACGGAGGACTTCTGATATCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR-3UTR CAA 90 bp ACCTCTTGTATAACTCAGTCTGAAGGGGTGTCAGCCTACAACAAACGACCTGCTCTCGACCCTTCAAAATaGGCAATTCAAAATGCTTCT +
Preference number: 3 (lower is better)
Translates to: TSCITQSEGVSAYNKRPALDPSK*AIQNAS
Trigger: AGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAG...AGCAGGTCGTTTGTTGTAGGCTGACACCCCTTCAGACTGAGTTATACAAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
3UTR TCA 72 bp TTAGAGCTGGATGATTACAAAGCTTCTTTAGCGAGGTaGTGGAAGAAAGGGAAGACACACTCATCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: LELDDYKASLAR*WKKGKTHSSCP
Trigger: AGGGCAAGATGAGTGTGTCTTCCCTTTCTTCCATCACCTCGCTAAAGAAGCTTTGTAATCATCCAGCTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
3UTR-3UTR CAA 90 bp TGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTATCATCATGCAGCCCTTCTaGATGATTTTCTCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: CSIFTGRYLERISEVLRIIMQPF*MIFSQR
Trigger: TCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGAT...GATACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp TTCTGGATGGGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCTGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FWMGVPEMSTRRLVFKLSWEFRR*APAGWC
Trigger: ACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCA...GGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp CTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LIQNQGIFFQGVMEGPADSFSWS*ALSGGG
Trigger: GCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCT...GTCCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CCA 90 bp ACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTGCTGCTCGGTGGAGTCCCAGACTaGGCGGAGTGGAGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TSRLAPMRLRPQPPALLLGGVPD*AEWSGD
Trigger: ATCCCCACTCCACTCCGCCCAGTCTGGGACTCCACC...GAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp CCGGCGGACCCCAGCCCTTTTCAGGCCCAATGCTCGAGAGCCCAGAGGACCTTGAAGAGGGGGCATGGATaGCGGGAATCCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PADPSPFQAQCSRAQRTLKRGHG*RESIQE
Trigger: TTCCTGGATGGATTCCCGCCATCCATGCCCCCTCTT...CAAGGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGGGCTGGGGTCCGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CCA 90 bp GGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTTGGAGAACCATCAGGGGGTaGCCGGATCTGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GVPEMSTRRLVFKLSRAWRTIRG*PDLTAV
Trigger: AACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCT...CCAAGCCCTGGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp ACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTGCTGCTCGGACGTATAAGTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSRLAPMRLRPQPPALLLGRIST*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTACTTATACGTCC...GAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459678.2
CDS-3UTR CCA 90 bp AAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTAGTCCGAGGCCCGGGTaGGGAGGGCGAGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KHDQPVSPNEIEATAPSFSPRPG*GGRVWR
Trigger: TCTCCAGACTCGCCCTCCCCACCCGGGCCTCGGACT...AAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGGCCATGATGCAGCCATaGCTGCCAGGGATGCGCCGA +
Preference number: 4 (lower is better)
Translates to: APAGWCSSCPGLGKSDSQAMMQP*LPGMRR
Trigger: TCGGCGCATCCCTGGCAGCCATGGCTGCATCATGGC...CTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAACACCAGCCGGCGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp ACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTGCTGCTCGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TSRLAPMRLRPQPPALLLGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...GAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp TCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGT +
Preference number: 4 (lower is better)
Translates to: SNMTSRLAPMRLRPQPPAGGGRI*RLLTQR
Trigger: ACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCC...AGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp CTCCTCATGAGAACGCTGGTGGAAGACGAAGGTGATGGCAGTGGAGGCAGCATCGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGT +
Preference number: 4 (lower is better)
Translates to: LLMRTLVEDEGDGSGGSIGGGRI*RLLTQR
Trigger: ACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCC...GATGCTGCCTCCACTGCCATCACCTTCGTCTTCCACCAGCGTTCTCATGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp GGCTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGTCTTCCCTGTCCCCTTaGGTGCTCACCACTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSYRTKASFSRGSWRARRSSLSP*VLTTRP
Trigger: TGGCCTAGTGGTGAGCACTCAAGGGGACAGGGAAGA...CCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CCA 90 bp CCTGCTCCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTCCAGGAGAGAGAAGCTaGGGTGAAAGTCCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PAPHPPHSCSVPSCGSDAPGERS*GESPRP
Trigger: GGGCCTCGGACTTTCACCCCAGCTTCTCTCTCCTGG...AGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGTCGATGGCCAGAGGTTaGATCCTCCCTCCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GWPDLTAVDTTSAVQPVMSMARG*ILPPSH
Trigger: ATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGA...CATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp TCTCGCCAGACCCGGGCCATGGCTTGTTCATCATTGGCTGGGTTCCAGTCAGGGGCCAGACCCGGGCCATaGCTTGTTCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRQTRAMACSSLAGFQSGARPGP*LVHHWL
Trigger: CAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGC...CCCTGACTGGAACCCAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp TACCTCATCCCGGAGCCCCCACTTATCAGTGCAGTGGTTCCACCCTGCCAGGTCTCGCCCAGAGAGAAGTaGCGCTCTACATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YLIPEPPLISAVVPPCQVSPREK*RSTSCS
Trigger: GGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGA...GACCTGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGCTCCGGGATGAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGAGAACCATCAGGGGGTaGCCGGATCTGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GWPDLTAVDTTSAVQPVMRTIRG*PDLTAV
Trigger: AACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCT...CATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp TCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTGCATCCCAGGCAGCCTaGAGTACCTCATCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SNMTSRLAPMRLRPQPPAASQAA*STSSRS
Trigger: GCTCCGGGATGAGGTACTCCAGGCTGCCTGGGATGC...AGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp ACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTGCTGCTCGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TSRLAPMRLRPQPPALLLAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...GAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp AGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCCCGCTGCTCCTCATGAGAGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SYTQTSWLSAEAPLLLMRAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...TCTCATGAGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp TCCTCTAAGAGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCCCGCTGCTCGCCTCTCACCCACTCTaGGTACAGCCATGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SSKSYTQTSWLSAEAPLLASHPL*VQPCRS
Trigger: TGATCTGCATGGCTGTACTCAGAGTGGGTGAGAGGC...GAGCAGCGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCTCTTAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp CTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACAGCCTTTTCAGGCCCAATaGTCGAGAGCCCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: LLVKLQLVMSAQRGRLIQPFQAQ*SRAQRT
Trigger: GGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGG...CTGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000657122.1
CDS-3UTR GCA 90 bp AGGCTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGCCCTGTCCCCTTGAGTaGTCACCACTAGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RLIQNQGIFFQGVMEGPAPCPLE*SPLGQV
Trigger: AACCTGGCCTAGTGGTGAGCACTCAAGGGGACAGGG...CGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CCA 90 bp TCTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACATCTTGGCCAGCTGGCTaGGAGCCAAGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SPCQASAGHERSAGEAHTSWPAG*EPSSSS
Trigger: TGAGGAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGA...TGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000657122.1
CDS-3UTR CCA 90 bp CTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACTTTCTCTTGGCCAGCTaGCTGGGAGCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LIQNQGIFFQGVMEGPADFLLAS*LGAKLL
Trigger: GAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGAGAAA...GTCCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CCA 90 bp GTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTCGCCCAGAGAGAAGTaGCGCTCTACATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VKHDQPVSPNEIEATAPSSPREK*RSTSCS
Trigger: GGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGA...GCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp TCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCTACACCCAGACCAGCTaGTTATCAGCGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SGSNMTSRLAPMRLRPQPYTQTS*LSAEAP
Trigger: CGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTA...GGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp TACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: YFVTATASGHRQNIIQDQSFSWS*ALSGGG
Trigger: GCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCT...CTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp TTGAGCCTGTGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGTGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSLCPSSHMTRPTLPFWRWEFRR*APAGWC
Trigger: ACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCA...CCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACACAGGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp TCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SGSNMTSRLAPMRLRPQPGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...GGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp TCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCGCCCCCACTTATCAGTaGAGTGGTTCCACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SGSNMTSRLAPMRLRPQPAPTYQ*SGSTLP
Trigger: TGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGC...GGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp TCTCGCCAGACCCGGGCCATGGCTTGTTCATCATTGGCTGGGTTCCAGTCAGGGAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRQTRAMACSSLAGFQSGRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...CCCTGACTGGAACCCAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp ACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTGCTGCTCAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSRLAPMRLRPQPPALLLRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...GAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR CAA 72 bp CCATCTCGCCAGACCCGGGCCATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGGTCAAACATGACCAGC +
Preference number: 4 (lower is better)
Translates to: PSRQTRAMACSS*AGFQSGSNMTS
Trigger: GCTGGTCATGTTTGACCCTGACTGGAACCCAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGCGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp AGACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGTGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RHTHLALKQFFCRFGLSQWEFRR*APAGWC
Trigger: ACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCA...CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
CDS-3UTR GCA 90 bp TCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 4 (lower is better)
Translates to: SNMTSRLAPMRLRPQPPAWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...AGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp CCGCCAGAATATAATCCAGGACCAGCATCTTACCTGACAGCTGGGGCTCCAGGGCTGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPEYNPGPASYLTAGAPGLPGLK*SQNHQG
Trigger: CCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAG...CCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTCCTGGATTATATTCTGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp TATCTCCTTCCTCTAAGAGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCCTTTCTCTTGGCCAGCTaGCTGGGAGCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YLLPLRATPRPAGYQRRPFLLAS*LGAKLL
Trigger: GAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGAGAAA...GGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCTCTTAGAGGAAGGAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp CCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGAAGTTCTTCACCAGGCTaGAAGGCGACACCACCACTG +
Preference number: 4 (lower is better)
Translates to: PHPPHSCSVPSCGSDAGRSSSPG*KATPPL
Trigger: CAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACT...TCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CAA 72 bp GAGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EHPPAGVQAVQG*VSLILRVLEPV
Trigger: CACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAACACCAGCCGGCGGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp GAAGTCCTCCGTATCAGGCATCTATTCACAATGCTGGTGAGCTCCCGCAGCCGCGATTCTCAGAGTTCTTaGGCCTGTGTCCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: EVLRIRHLFTMLVSSRSRDSQSS*ACVPRH
Trigger: GTGACGAGGGACACAGGCTCAAGAACTCTGAGAATC...GCGGCTGCGGGAGCTCACCAGCATTGTGAATAGATGCCTGATACGGAGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp TCTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACAGATTCTCAGAGTTCTTaGGCCTGTGTCCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SPCQASAGHERSAGEAHTDSQSS*ACVPRH
Trigger: GTGACGAGGGACACAGGCTCAAGAACTCTGAGAATC...TGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp TTCTGGATGGGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCCTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: FWMGVPEMSTRRLVFKLSLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...GGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR GCA 90 bp GGTGTAATTCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: GVIRHQHYFVTATASGHRLLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...GCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp TCTCCTAGCTGCCTGTCTGCCTCACTAGCAGCAGCGTCTCGACCCTTCAAAATTGCCCCCACTTATCAGTaGAGTGGTTCCACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPSCLSASLAAASRPFKIAPTYQ*SGSTLP
Trigger: TGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGC...AATTTTGAAGGGTCGAGACGCTGCTGCTAGTGAGGCAGACAGGCAGCTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGGGTGGGATTGGGGGTaGGTAATCACTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EASFIQDKQLLQLAQREVGWDWG*VITGQE
Trigger: CTCCTGGCCAGTGATTACCCACCCCCAATCCCACCC...CACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGCCAGGAACTGGTGTTTaGAACCAAACTGTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GWPDLTAVDTTSAVQPVMPGTGV*NQTVRV
Trigger: CACTCTCACAGTTTGGTTCCAAACACCAGTTCCTGG...CATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AGACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGGCATCCCAGGCAGCCTaGAGTACCTCATCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RHTHLALKQFFCRFGLSQASQAA*STSSRS
Trigger: GCTCCGGGATGAGGTACTCCAGGCTGCCTGGGATGC...CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp CAGAGGTTGGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTTCTTTACACCCAGACCAGCTaGTTATCAGCGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QRLDPPSEPFPNLIVPVLYTQTS*LSAEAP
Trigger: CGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTA...AAGAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
3UTR CAA 72 bp TTCTTCACCAGGCTGGAAGGCGACACCACCACTGCCTaGTCAATTTCTGGCTTGCACTCTGGACTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: FFTRLEGDTTTA*SISGLHSGLWR
Trigger: ACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp CATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACCCATAAATGCTTCATGCTaGCTGCTGTCCAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: HTEPRHLFPGGHGGPGGPINASC*LLSRQG
Trigger: ACCTTGTCTGGACAGCAGTCAGCATGAAGCATTTAT...GGGTCCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR TCA 90 bp GTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGGATGCGCCGACTGGTaGCACACTCCCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: VSLRLASSRINSSFNSPRGCADW*HTPTGI
Trigger: AATTCCTGTGGGAGTGTGTCACCAGTCGGCGCATCC...TCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp CCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGTGTGTCGTGTCCACATCAATGTaGTGCACTGCAGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PDLTAVDTTSAVQPVMCVVSTSM*CTAASF
Trigger: GAAAGACGCTGCAGTGCATCACATTGATGTGGACAC...GACACACATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp CAGAGGTTGGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTTCTTTATTCACAATGCTGGTaGGCTCCCGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRLDPPSEPFPNLIVPVLYSQCW*APAAAP
Trigger: AGGAGCGGCTGCGGGAGCTCACCAGCATTGTGAATA...AAGAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp ACCTCTTGTATAACTCAGTCTGAAGGGGTGTCAGCCTACAACAAACGACCTGCTCCCCGCTGCTCCTCATaGGAACGCTGGTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: TSCITQSEGVSAYNKRPAPRCSS*ERWWKT
Trigger: CGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGGGG...AGCAGGTCGTTTGTTGTAGGCTGACACCCCTTCAGACTGAGTTATACAAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp CAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACAGAACCAAGGATGCTTCATGCTGACTaGTGTCCAGACAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QASAGHERSAGEAHTEPRMLHAD*CPDKVV
Trigger: AACCACCTTGTCTGGACAGCAGTCAGCATGAAGCAT...CCTTGGTTCTGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR GCA 90 bp TTCTGGATGGGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCCTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FWMGVPEMSTRRLVFKLSLQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...GGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR GCA 90 bp TCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTCCCTGCATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SVPSCGSDAGRSSPQWSLHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...CAGGGACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGCGCTGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASFIQDKQLLQLAQREVALPGLK*SQNHQG
Trigger: CCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAG...CGCCACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp GCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGCGAAGAGGGGGCATGGATaGCGGGAATCCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ASFIQDKQLLQLAQREVAKRGHG*RESIQE
Trigger: TTCCTGGATGGATTCCCGCCATCCATGCCCCCTCTT...CGCCACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp TCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCTGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SGSNMTSRLAPMRLRPQPWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...GGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
3UTR CAA 72 bp TGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCGGGCCATGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CRQQAVDIASLL*TISPDPGHGLF
Trigger: GAACAAGCCATGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp CCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACAGAAAACGTCAAGTACCCATaGGCCAAAGGTCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PCQASAGHERSAGEAHTENVKYP*AKGQKQ
Trigger: CTGCTTTTGACCTTTGGCTCATGGGTACTTGACGTT...TTCTGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000657122.1
CDS-3UTR TCA 90 bp CACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCGTCCCTCGTCACATATaGCCAGACCAACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HTAAQCLLVALTLEDLLLVPRHI*PDQHFL
Trigger: AAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGAC...GAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp GCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGTTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: APAGWCSSCPGLGKSDSQLYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...CTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAACACCAGCCGGCGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp AGCTTTTGGTCTATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTTGGATCGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFWSISSLDPPSMARGWIDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...GATCCAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAATAGACCAAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp GTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VTEASFIQDKQLLQLAQRAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...TCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp GAAAGGATATCAGAAGTCCTCCGTATCAGGCATCTATTCACAATGCTGGTGAGCGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGT +
Preference number: 4 (lower is better)
Translates to: ERISEVLRIRHLFTMLVSGGGRI*RLLTQR
Trigger: ACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCC...GCTCACCAGCATTGTGAATAGATGCCTGATACGGAGGACTTCTGATATCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp TGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCACCCTGCCAGGTCTaGAGTGCAGTCAGAACCATC +
Preference number: 4 (lower is better)
Translates to: CRQQAVDIASLLLTISPDPPCQV*SAVRTI
Trigger: GATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGG...GTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp AGGGGTGTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTACCCCGCTGCTCCTCATaGGAACGCTGGTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: RGVSLQQTTCSIFTGRYLPRCSS*ERWWKT
Trigger: CGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGGGG...TAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGACACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GTTTCTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATATCTGTAGAGGGGGCTaGTACATTATTGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: VSPCQASAGHERSAGEAHICRGG*YIIERT
Trigger: GGTCCTCTCAATAATGTAGCAGCCCCCTCTACAGAT...ATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000657122.1
CDS-3UTR GCA 90 bp GTCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: VRVKHDQPVSPNEIEATALKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...GGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp CTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGCTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: LRLASSRINSSFNSPREKLLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...CTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCGGGCCATGGCTTGCACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: VDIASLLLTISPDPGHGLHTAAQ*LLVALT
Trigger: CGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG...CAAGCCATGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCGGGCCATGGCTTGTGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 4 (lower is better)
Translates to: VDIASLLLTISPDPGHGLWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...CAAGCCATGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp ACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTGCTGCTCAATCCATCCAGGAACTaGTGTTTGGAACCAAACTGT +
Preference number: 4 (lower is better)
Translates to: TSRLAPMRLRPQPPALLLNPSRN*CLEPNC
Trigger: ACAGTTTGGTTCCAAACACCAGTTCCTGGATGGATT...GAGCAGCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp CTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGCTTCAGGTTTTCTCTTaGCCAGCTGGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LRLASSRINSSFNSPREKLQVFS*PAGWEP
Trigger: TGGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAG...CTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp TCTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACAAAACACTCCTGGATCTaGGTCTCACTGCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: SPCQASAGHERSAGEAHTKHSWI*VSLLDF
Trigger: GAAATCCAGCAGTGAGACCCAGATCCAGGAGTGTTT...TGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000657122.1
CDS-3UTR CCA 90 bp CATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACCCGACAAGGTGGTTGATTaGTTAGCTGACTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: HTEPRHLFPGGHGGPGGPDKVVD*LADSKV
Trigger: AACCTTTGAGTCAGCTAACCAATCAACCACCTTGTC...GGGTCCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CCA 90 bp CCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACAGAATTGCACTCTGGACTCTaGCGTAAAAGTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: PCQASAGHERSAGEAHTELHSGL*RKSVHI
Trigger: GATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAA...TTCTGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GGACGTATAAGTACCTTCGGGCACGGCACAGCTTCTCAAAGAGATCCAAAGTCTGCCAGACCCGGGCCATaGCTTGTTCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRISTFGHGTASQRDPKSARPGP*LVHHWL
Trigger: CAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGC...AGACTTTGGATCTCTTTGAGAAGCTGTGCCGTGCCCGAAGGTACTTATACGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp GAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAGATCGCCCAGAGAGAAGTaGCGCTCTACATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EDSNMKAEGLIGNDEDGRSPREK*RSTSCS
Trigger: GGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGA...TCTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp GACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGAGAGAGAAGCTGGGGTaGAAGTCCGAGGCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: DLLNLHRQIFRKDIRSPPREKLG*KSEARV
Trigger: CACCCGGGCCTCGGACTTTCACCCCAGCTTCTCTCT...CGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp AGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGCTCCACGCTGGTTCATaGATCCTTCCAGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SCSVPSCGSDAGRSSPQWLHAGS*ILPAFG
Trigger: ACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAG...CCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp CACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACGTCCCTCGTCACATATaGCCAGACCAACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HCYGFGSPPEYNPGPASYVPRHI*PDQHFL
Trigger: AAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGAC...GTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476687.2
ENST00000655446.1
CDS-3UTR TCA 90 bp GTCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCTTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: VRVKHDQPVSPNEIEATALYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...GGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp GCAATTCTTCTGCCGGTTTGGCTTGTCTCAGAAACCTCTTGTATAACTCAGTCTGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AILLPVWLVSETSCITQSDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...AGACTGAGTTATACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp TCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTCCCTGGGCTCGATGGACTATTaGAGCGTTCTACAACCTTGG +
Preference number: 4 (lower is better)
Translates to: SVPSCGSDAGRSSPQWSLGSMDY*SVLQPW
Trigger: CCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCC...CAGGGACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp ACCTCTTGTATAACTCAGTCTGAAGGGGTGTCAGCCTACAACAAACGACCTGCTGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TSCITQSEGVSAYNKRPAGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...AGCAGGTCGTTTGTTGTAGGCTGACACCCCTTCAGACTGAGTTATACAAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp AGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGATCAATGTGATGCACTaGAGCGTCTTTCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SCSVPSCGSDAGRSSPQWINVMH*SVFPRP
Trigger: GGGCCTAGGAAAGACGCTGCAGTGCATCACATTGAT...CCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp TGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: CRQQAVDIASLLLTISPDHTAAQ*LLVALT
Trigger: CGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG...GTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp CTCAATGGTCCCTGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCCATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LNGPCRQQAVDIASLLLTHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...GGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCAGGGACCATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp TCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATCAGCTTCATGCTGACTaGTGTCCAGACAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: STPALLCHCYGFGSPPEYQLHAD*CPDKVV
Trigger: AACCACCTTGTCTGGACAGCAGTCAGCATGAAGCTG...ATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAGTCCGAGGCCCGGGTaGGGAGGGCGAGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRSPRPG*GGRVWR
Trigger: TCTCCAGACTCGCCCTCCCCACCCGGGCCTCGGACT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp ACCTCTTGTATAACTCAGTCTGAAGGGGTGTCAGCCTACAACAAACGACCTGCTGGGGTGGGTAATCACTaGCCAGGAGAGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSCITQSEGVSAYNKRPAGVGNH*PGERSW
Trigger: CCAGCTTCTCTCTCCTGGCCAGTGATTACCCACCCC...AGCAGGTCGTTTGTTGTAGGCTGACACCCCTTCAGACTGAGTTATACAAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp CACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACGGGTCAACAACCACATaGACAGGGAGTTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HCYGFGSPPEYNPGPASYGSTTT*TGSFSL
Trigger: CAAGGAGAAACTCCCTGTCCATGTGGTTGTTGACCC...GTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp TCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATTGCTTCTTGAATTCATaGGCAGTCCCTAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: STPALLCHCYGFGSPPEYCFLNS*AVPRMP
Trigger: CGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCA...ATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GGAGTTCCGGAGATGAGCACCCGCCGGCTGGTGTTCAAGCTGTCCAGGGCTTGGTCGACCCTTCAAAATTaGCAATTCAAAATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GVPEMSTRRLVFKLSRAWSTLQN*QFKMLL
Trigger: AAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGA...CCAAGCCCTGGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTGATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: NMTSRLAPMRLRPQPPALILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...CAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp GTTTCTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATAAAGTCAGGGCTCGATaGACTATTGAAGCGTTCTAC +
Preference number: 4 (lower is better)
Translates to: VSPCQASAGHERSAGEAHKVRAR*TIEAFY
Trigger: GTAGAACGCTTCAATAGTCCATCGAGCCCTGACTTT...ATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EASFIQDKQLLQLAQREVRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...CACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQSFSWS*ALSGGG
Trigger: GCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKSFSWS*ALSGGG
Trigger: GCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRSFSWS*ALSGGG
Trigger: GCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRWEFRR*APAGWC
Trigger: ACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GTAATTCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGTTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: VIRHQHYFVTATASGHRQLYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...CTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GAAAGGATATCAGAAGTCCTCCGTATCAGGCATCTATTCACAATGCTGGTGAGCCCTTTTCAGGCCCAATaGTCGAGAGCCCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: ERISEVLRIRHLFTMLVSPFQAQ*SRAQRT
Trigger: GGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGG...GCTCACCAGCATTGTGAATAGATGCCTGATACGGAGGACTTCTGATATCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp GAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGAGGCGACACCACCACTaGCTTGTCAATTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EASFIQDKQLLQLAQREVRRHHH*LVNFWL
Trigger: AAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCT...CACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp TCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SNMTSRLAPMRLRPQPPAKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...AGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp ATTGAAGCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATCGTGCCATCCAGCATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: IEAFYNLGSLLNGHRAIQHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...CTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp TCTGCCTCACTAGCAGCAGCGTCTCGACCCTTCAAAATTGGCAATTCAAAATGCTGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 4 (lower is better)
Translates to: SASLAAASRPFKIGNSKCWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...GCATTTTGAATTGCCAATTTTGAAGGGTCGAGACGCTGCTGCTAGTGAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp TGTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGCCAGACTGGGCGGAGTaGAGTGGGGATGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: CQPTTNDLLNLHRQIFRKPDWAE*SGDDGP
Trigger: GGGACCATCATCCCCACTCCACTCCGCCCAGTCTGG...CTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AGGCACCCACAAAGCCATCCTCCTCTTCCACACACTTATCATAGATTAGAGCTGATCTTACCTGACAGCTaGGGCTCCAGGGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: RHPQSHPPLPHTYHRLELILPDS*GSRALE
Trigger: CTCTAAGGCCCTGGAGCCCCAGCTGTCAGGTAAGAT...CAGCTCTAATCTATGATAAGTGTGTGGAAGAGGAGGATGGCTTTGTGGGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AACCTGTCATGTGTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCATCTTACCTGACAGCTaGGGCTCCAGGGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: NLSCVSLRLASSRINSSFILPDS*GSRALE
Trigger: CTCTAAGGCCCTGGAGCCCCAGCTGTCAGGTAAGAT...GAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACACACATGACAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp ACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGAAATCTTACCTGACAGCTaGGGCTCCAGGGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: THSSCPQAILLPVWLVSEILPDS*GSRALE
Trigger: CTCTAAGGCCCTGGAGCCCCAGCTGTCAGGTAAGAT...TTCTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp CACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAAAGTCAGGGCTCGATaGACTATTGAAGCGTTCTAC +
Preference number: 4 (lower is better)
Translates to: HTAAQCLLVALTLEDLLLKVRAR*TIEAFY
Trigger: GTAGAACGCTTCAATAGTCCATCGAGCCCTGACTTT...GAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AGGGGTGTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAAGAACCATCAGGGGGTaGCCGGATCTGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RGVSLQQTTCSIFTGRYLRTIRG*PDLTAV
Trigger: AACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCT...TAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGACACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp TGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCACTTATCAGTGCAGTaGTTCCACCCTGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CRQQAVDIASLLLTISPDHLSVQ*FHPARS
Trigger: AGACCTGGCAGGGTGGAACCACTGCACTGATAAGTG...GTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AGAAAGGATATCAGAAGTCCTCCGTATCAGGCATCTCAAGTGATCCACTCGCCTTTCAACAGGGCCCTGTaGAGCAAGGAGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RKDIRSPPYQASQVIHSPFNRAL*SKEPLF
Trigger: GAAAAGGGGCTCCTTGCTCCACAGGGCCCTGTTGAA...AGGCGAGTGGATCACTTGAGATGCCTGATACGGAGGACTTCTGATATCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000661701.1
3UTR CAA 72 bp TCAGGGCTCGATGGACTATTGAAGCGTTCTACAACCTaGGCTCGCTTCTTAATGGACATCGTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SGLDGLLKRSTT*ARFLMDIVPSR
Trigger: CCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAGAGAGAAGCTGGGGTaGAAGTCCGAGGCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKREKLG*KSEARV
Trigger: CACCCGGGCCTCGGACTTTCACCCCAGCTTCTCTCT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQWEFRR*APAGWC
Trigger: ACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGTATTCACAATGCTGGTaGGCTCCCGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSLQQTTCSIFTGRYLERYSQCW*APAAAP
Trigger: AGGAGCGGCTGCGGGAGCTCACCAGCATTGTGAATA...CCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NDLLNLHRQIFRKDIRSPDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...AGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGACCAGCATCTTACCTaGCAGCTGGGGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQDQHLT*QLGLQG
Trigger: GCCCTGGAGCCCCAGCTGTCAGGTAAGATGCTGGTC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGGGCTCGATGGACTATTaGAGCGTTCTACAACCTTGG +
Preference number: 4 (lower is better)
Translates to: VQAVQGLVSLILRVLEPVGSMDY*SVLQPW
Trigger: CCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCC...CACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp GGACGTATAAGTACCTTCGGGCACGGCACAGCTTCTCAAAGAGATCCAAAGTCTGGCTCGATGGACTATTaGAGCGTTCTACAACCTTGG +
Preference number: 4 (lower is better)
Translates to: GRISTFGHGTASQRDPKSGSMDY*SVLQPW
Trigger: CCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCC...AGACTTTGGATCTCTTTGAGAAGCTGTGCCGTGCCCGAAGGTACTTATACGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRGGGRI*RLLTQR
Trigger: ACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQGGGRI*RLLTQR
Trigger: ACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKGGGRI*RLLTQR
Trigger: ACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACCCCGCTGCTCCTCATaGGAACGCTGGTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKPRCSS*ERWWKT
Trigger: CGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGGGG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACCCCGCTGCTCCTCATaGGAACGCTGGTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQPRCSS*ERWWKT
Trigger: CGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGGGG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCGGGCCATGGCTTGATCTGTAGAGGGGGCTaGTACATTATTGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: VDIASLLLTISPDPGHGLICRGG*YIIERT
Trigger: GGTCCTCTCAATAATGTAGCAGCCCCCTCTACAGAT...CAAGCCATGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp CCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATCTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PDQHFLSGGLQHEGGRSHLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...ATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR GCA 90 bp GCTCGATGGACTATTGAAGCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATGCACTACTTTGTCACTaGTACGGCTTCGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: ARWTIEAFYNLGSLLNGHALLCH*YGFGSP
Trigger: CGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGC...ATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACCAGACTGGGCGGAGTaGAGTGGGGATGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKPDWAE*SGDDGP
Trigger: GGGACCATCATCCCCACTCCACTCCGCCCAGTCTGG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGTGGAGTCCCAGACTaGGCGGAGTGGAGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRGGVPD*AEWSGD
Trigger: ATCCCCACTCCACTCCGCCCAGTCTGGGACTCCACC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp TGCTGTCCAGACAAGGTGGTTGATTGGTTAGCTGACTCAAAGGTTTCCGAAAAGCTTCAGGTTTTCTCTTaGCCAGCTGGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CCPDKVVDWLADSKVSEKLQVFS*PAGWEP
Trigger: TGGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAG...CTTTTCGGAAACCTTTGAGTCAGCTAACCAATCAACCACCTTGTCTGGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CCA 90 bp CTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGCCTTGTCAATTTCTaGCTTGCACTCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: LRLASSRINSSFNSPREKCLVNF*LALWTL
Trigger: CAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCA...CTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp CACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: HCYGFGSPPEYNPGPASYILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...GTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp TGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CPSSHMTRPTLPFWRTPTWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...TGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGCATCCCAGGCAGCCTaGAGTACCTCATCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQASQAA*STSSRS
Trigger: GCTCCGGGATGAGGTACTCCAGGCTGCCTGGGATGC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGCATCCCAGGCAGCCTaGAGTACCTCATCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKASQAA*STSSRS
Trigger: GCTCCGGGATGAGGTACTCCAGGCTGCCTGGGATGC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp TGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACAACCCTGGCTCCACGCTaGTTCATGAATCCTTACGTA +
Preference number: 4 (lower is better)
Translates to: CPSSHMTRPTLPFWRTPTTLAPR*FMNPYV
Trigger: TACGTAAGGATTCATGAACCAGCGTGGAGCCAGGGT...TGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
3UTR CAA 72 bp TATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTaGGATCCTCCCTCCGAGCCATTTCCCAACCTCATT +
Preference number: 4 (lower is better)
Translates to: YFILRSSIDGQR*DPPSEPFPNLI
Trigger: AATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp TGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACAAACGTCAAGTACCCATaGGCCAAAGGTCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: CPSSHMTRPTLPFWRTPTNVKYP*AKGQKQ
Trigger: CTGCTTTTGACCTTTGGCTCATGGGTACTTGACGTT...TGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp TCTGCCTCACTAGCAGCAGCGTCTCGACCCTTCAAAATTGGCAATTCAAAATGCGTCCCTCGTCACATATaGCCAGACCAACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: SASLAAASRPFKIGNSKCVPRHI*PDQHFL
Trigger: AAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGAC...GCATTTTGAATTGCCAATTTTGAAGGGTCGAGACGCTGCTGCTAGTGAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp TCTCCTTGTCAAGCTTCAGCTGGTCATGAGCGCTCAGCGGGGGAGGCTCATACACAAAATGTACCAAGCTaGAATACTCAAGCAGATCAT +
Preference number: 4 (lower is better)
Translates to: SPCQASAGHERSAGEAHTQNVPS*NTQADH
Trigger: ATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTG...TGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGGGTGGCCGGATCTaGCGGCTGTTGACACAACGT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQGGGRI*RLLTQR
Trigger: ACGTTGTGTCAACAGCCGTCAGATCCGGCCACCCCC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp CTGGTTCATGAATCCTTCCAGCTTTTGGTCTATTTCATCCTTAGATCCTCCATCCCACCCTGCCAGGTCTaGAGTGCAGTCAGAACCATC +
Preference number: 4 (lower is better)
Translates to: LVHESFQLLVYFILRSSIPPCQV*SAVRTI
Trigger: GATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGG...GATGGAGGATCTAAGGATGAAATAGACCAAAAGCTGGAAGGATTCATGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp CCCCAGCCCTTTTCAGGCCCAATGCTCGAGAGCCCAGAGGACCTTGATAATTTGAATGCTTCGAATAAATaGTTCATGCTGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PQPFSGPMLESPEDLDNLNASNK*FMLTAV
Trigger: GACAGCAGTCAGCATGAAGCATTTATTCGAAGCATT...CAAATTATCAAGGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGGGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR GCA 90 bp CCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATCTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PDQHFLSGGLQHEGGRSHLQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...ATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGGGTGGGATTGGGGGTaGGTAATCACTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKGWDWG*VITGQE
Trigger: CTCCTGGCCAGTGATTACCCACCCCCAATCCCACCC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATCTTGGCCAGCTGGCTaGGAGCCAAGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQSWPAG*EPSSSS
Trigger: TGAGGAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATCTTGGCCAGCTGGCTaGGAGCCAAGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKSWPAG*EPSSSS
Trigger: TGAGGAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGTGGCGGACAAGGTGGTTGATTaGTTAGCTGACTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: ASFIQDKQLLQLAQREVADKVVD*LADSKV
Trigger: AACCTTTGAGTCAGCTAACCAATCAACCACCTTGTC...CGCCACTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCCATGATGCAGCCATaGCTGCCAGGGATGCGCCGA +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQAMMQP*LPGMRR
Trigger: TCGGCGCATCCCTGGCAGCCATGGCTGCATCATGGC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACCTGTCATGTGTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCTGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NLSCVSLRLASSRINSSFWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...GAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACACACATGACAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCATCCCAGGCAGCCTaGAGTACCTCATCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQASQAA*STSSRS
Trigger: GCTCCGGGATGAGGTACTCCAGGCTGCCTGGGATGC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATACACCCAGACCAGCTaGTTATCAGCGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQYTQTS*LSAEAP
Trigger: CGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GCTCGATGGACTATTGAAGCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATTTTGGAACCAAACTGTaGGAGTGGCCGTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: ARWTIEAFYNLGSLLNGHFGTKL*EWPSPI
Trigger: TATTGGGGACGGCCACTCTCACAGTTTGGTTCCAAA...ATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGATGCGCCGACTGGTaGCACACTCCCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRGCADW*HTPTGI
Trigger: AATTCCTGTGGGAGTGTGTCACCAGTCGGCGCATCC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCCATCTCATCAGCCATaGTGCAGCCATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRPSHQP*CSHGCQ
Trigger: CTGGCAGCCATGGCTGCATCATGGCTGATGAGATGG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACCATCTCATCAGCCATaGTGCAGCCATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKPSHQP*CSHGCQ
Trigger: CTGGCAGCCATGGCTGCATCATGGCTGATGAGATGG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp TCTCCTAGCTGCCTGTCTGCCTCACTAGCAGCAGCGTCTCGACCCTTCAAAATTATTCAAAATGCTTCTTaGATTCATGGGCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: SPSCLSASLAAASRPFKIIQNAS*IHGQSL
Trigger: TAGGGACTGCCCATGAATTCAAGAAGCATTTTGAAT...AATTTTGAAGGGTCGAGACGCTGCTGCTAGTGAGGCAGACAGGCAGCTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTATTCACAATGCTGGTaGGCTCCCGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRYSQCW*APAAAP
Trigger: AGGAGCGGCTGCGGGAGCTCACCAGCATTGTGAATA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATATTCACAATGCTGGTaGGCTCCCGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQYSQCW*APAAAP
Trigger: AGGAGCGGCTGCGGGAGCTCACCAGCATTGTGAATA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACCACCCTGCCAGGTCTaGAGTGCAGTCAGAACCATC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQPPCQV*SAVRTI
Trigger: GATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACCTTTTCAGGCCCAATaGTCGAGAGCCCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQPFQAQ*SRAQRT
Trigger: GGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCCTTTTCAGGCCCAATaGTCGAGAGCCCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRPFQAQ*SRAQRT
Trigger: GGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp TCTGCCTCACTAGCAGCAGCGTCTCGACCCTTCAAAATTGGCAATTCAAAATGCTGTCAATTTCTGGCTTaGACTCTGGACTCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: SASLAAASRPFKIGNSKCCQFLA*TLDSGV
Trigger: TACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACA...GCATTTTGAATTGCCAATTTTGAAGGGTCGAGACGCTGCTGCTAGTGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR GCA 90 bp CCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGAATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: PHPPHSCSVPSCGSDAGRIGNSK*FLNSWA
Trigger: TGCCCATGAATTCAAGAAGCATTTTGAATTGCCAAT...TCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp TGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CRQQAVDIASLLLTISPDLQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...GTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp CAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGTCCCTCGTCACAAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QGLVSLILRVLEPVSLVTKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...TGTGACGAGGGACACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR GCA 90 bp CTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAGAGAAGAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LRLASSRINSSFNSPREKKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...CTTCTCTCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGCCCCCACTTATCAGTaGAGTGGTTCCACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRAPTYQ*SGSTLP
Trigger: TGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGCCCCCACTTATCAGTaGAGTGGTTCCACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQAPTYQ*SGSTLP
Trigger: TGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGCCCCCACTTATCAGTaGAGTGGTTCCACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKAPTYQ*SGSTLP
Trigger: TGGCAGGGTGGAACCACTGCACTGATAAGTGGGGGC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTTCCCAGGGCTGGAGGTaGAAACCAGGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: TCSIFTGRYLERISEVLRSQGWR*KPGSDS
Trigger: TGAGTCTGATCCTGGTTTCCACCTCCAGCCCTGGGA...ACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AGCTTTTGGTCTATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTTGGATCGAAATTTCCCAGGGCTaGAGGTGGAAACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SFWSISSLDPPSMARGWIEISQG*RWKPGS
Trigger: TGATCCTGGTTTCCACCTCCAGCCCTGGGAAATTTC...GATCCAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAATAGACCAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCCAGGAGAGAGAAGCTaGGGTGAAAGTCCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQPGERS*GESPRP
Trigger: GGGCCTCGGACTTTCACCCCAGCTTCTCTCTCCTGG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGGGTGGGTAATCACTaGCCAGGAGAGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRGVGNH*PGERSW
Trigger: CCAGCTTCTCTCTCCTGGCCAGTGATTACCCACCCC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp ACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTTCTTGGCCAGCTGGCTaGGAGCCAAGCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TNDLLNLHRQIFRKDIRSSWPAG*EPSSSS
Trigger: TGAGGAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGA...ACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTTTCTCTTGGCCAGCTaGCTGGGAGCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRFLLAS*LGAKLL
Trigger: GAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGAGAAA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATTTCTCTTGGCCAGCTaGCTGGGAGCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKFLLAS*LGAKLL
Trigger: GAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGAGAAA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATTTCTCTTGGCCAGCTaGCTGGGAGCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQFLLAS*LGAKLL
Trigger: GAGGAGCTTGGCTCCCAGCCAGCTGGCCAAGAGAAA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTCGATGGCCAGAGGTTaGATCCTCCCTCCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRSMARG*ILPPSH
Trigger: ATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTTCGATGGCCAGAGGTTaGATCCTCCCTCCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NDLLNLHRQIFRKDIRSPSMARG*ILPPSH
Trigger: ATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGA...AGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATCGATGGCCAGAGGTTaGATCCTCCCTCCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQSMARG*ILPPSH
Trigger: ATGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTACGTAAGAAAGATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: MGEDTLAPRWFMNPYVRKILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...CTTTCTTACGTAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGCCAGACCCGGGCCATaGCTTGTTCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRARPGP*LVHHWL
Trigger: CAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGCCAGACCCGGGCCATaGCTTGTTCATCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQARPGP*LVHHWL
Trigger: CAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTCGCCCAGAGAGAAGTaGCGCTCTACATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRSPREK*RSTSCS
Trigger: GGAGCAGGATGTAGAGCGCCACTTCTCTCTGGGCGA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAGAACCATCAGGGGGTaGCCGGATCTGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQRTIRG*PDLTAV
Trigger: AACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAGAACCATCAGGGGGTaGCCGGATCTGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKRTIRG*PDLTAV
Trigger: AACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAGAACCATCAGGGGGTaGCCGGATCTGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRRTIRG*PDLTAV
Trigger: AACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GCAATTCTTCTGCCGGTTTGGCTTGTCTCAGAAACCTCTTGTATAACTCAGTCTCACTTATCAGTGCAGTaGTTCCACCCTGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AILLPVWLVSETSCITQSHLSVQ*FHPARS
Trigger: AGACCTGGCAGGGTGGAACCACTGCACTGATAAGTG...AGACTGAGTTATACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTACACCCAGACCAGCTaGTTATCAGCGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQYTQTS*LSAEAP
Trigger: CGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGATGCGCCGACTGGTaGCACACTCCCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQGCADW*HTPTGI
Trigger: AATTCCTGTGGGAGTGTGTCACCAGTCGGCGCATCC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCCATCTCATCAGCCATaGTGCAGCCATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQPSHQP*CSHGCQ
Trigger: CTGGCAGCCATGGCTGCATCATGGCTGATGAGATGG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp CAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAACCATCTCATCAGCCATaGTGCAGCCATGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QQTTCSIFTGRYLERISEPSHQP*CSHGCQ
Trigger: CTGGCAGCCATGGCTGCATCATGGCTGATGAGATGG...TTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp ACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTGATTCTCAGAGTTCTTaGGCCTGTGTCCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: TCSIFTGRYLERISEVLRDSQSS*ACVPRH
Trigger: GTGACGAGGGACACAGGCTCAAGAACTCTGAGAATC...ACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGATCTGACGGCTGTTaGCACAACGTCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQGSDGC*HNVGSA
Trigger: TGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCCACCCTGCCAGGTCTaGAGTGCAGTCAGAACCATC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQPPCQV*SAVRTI
Trigger: GATGGTTCTGACTGCACTTCAGACCTGGCAGGGTGG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp CAAAGCCATCCTCCTCTTCCACACACTTATCATAGATTAGAGCTGGATGATTACATCAGGCATCTCAAGTaGTCCACTCGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSHPPLPHTYHRLELDDYIRHLK*STRLSF
Trigger: GAAGCTGAGGCGAGTGGATCACTTGAGATGCCTGAT...GTAATCATCCAGCTCTAATCTATGATAAGTGTGTGGAAGAGGAGGATGGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661701.1
CDS-3UTR GCA 90 bp CTATCTCCTTCCTCTAAGAGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LSPSSKSYTQTSWLSAEAIGNSK*FLNSWA
Trigger: TGCCCATGAATTCAAGAAGCATTTTGAATTGCCAAT...GGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCTCTTAGAGGAAGGAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GTCATGTGTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCCTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VMCVTEASFIQDKQLLQLLQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...GAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACACACATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp CCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGAAACCTCTTGTATAACCTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PSSNSSAGLACLRNLLYNLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...GTTATACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGCACTACTTTGTCACTaGTACGGCTTCGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQALLCH*YGFGSP
Trigger: CGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGCACTACTTTGTCACTaGTACGGCTTCGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKALLCH*YGFGSP
Trigger: CGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRLLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKLLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQLLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRHTAAQ*LLVALT
Trigger: CGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKHTAAQ*LLVALT
Trigger: CGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp CCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCCACACAGCTGCTCAGTaGCTTCTTGTGGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: PTTNDLLNLHRQIFRKDIHTAAQ*LLVALT
Trigger: CGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTG...GATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCTGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRLPGLK*SQNHQG
Trigger: CCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACTGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQLPGLK*SQNHQG
Trigger: CCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATCCCAGGGCTGGAGGTaGAAACCAGGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKSQGWR*KPGSDS
Trigger: TGAGTCTGATCCTGGTTTCCACCTCCAGCCCTGGGA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAAGAGGGGGCATGGATaGCGGGAATCCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQKRGHG*RESIQE
Trigger: TTCCTGGATGGATTCCCGCCATCCATGCCCCCTCTT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCTTCAGGTTTTCTCTTaGCCAGCTGGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRLQVFS*PAGWEP
Trigger: TGGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAGTTCTTCACCAGGCTaGAAGGCGACACCACCACTG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRSSSPG*KATPPL
Trigger: CAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAGTTCTTCACCAGGCTaGAAGGCGACACCACCACTG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQSSSPG*KATPPL
Trigger: CAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAACCCTGGCTCCACGCTaGTTCATGAATCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKTLAPR*FMNPSS
Trigger: GCTGGAAGGATTCATGAACCAGCGTGGAGCCAGGGT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGACCCTGGCTCCACGCTaGTTCATGAATCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRTLAPR*FMNPSS
Trigger: GCTGGAAGGATTCATGAACCAGCGTGGAGCCAGGGT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAACCCTGGCTCCACGCTaGTTCATGAATCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQTLAPR*FMNPSS
Trigger: GCTGGAAGGATTCATGAACCAGCGTGGAGCCAGGGT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGGTGTAATTCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGTCGACCCTTCAAAATTaGCAATTCAAAATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GCNSTPALLCHCYGFGSPSTLQN*QFKMLL
Trigger: AAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGA...CGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGAATTACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATCTTACCTGACAGCTaGGGCTCCAGGGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRILPDS*GSRALE
Trigger: CTCTAAGGCCCTGGAGCCCCAGCTGTCAGGTAAGAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTTCAACAGGGCCCTGTaGAGCAAGGAGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRFNRAL*SKEPLF
Trigger: GAAAAGGGGCTCCTTGCTCCACAGGGCCCTGTTGAA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGATTCTCAGAGTTCTTaGGCCTGTGTCCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQDSQSS*ACVPRH
Trigger: GTGACGAGGGACACAGGCTCAAGAACTCTGAGAATC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp TTGGCTCGCTTCTTAATGGACATCGTGCCATCCAGGCGGACGTATAAGTACCTTATTCAAAATGCTTCTTaGATTCATGGGCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LARFLMDIVPSRRTYKYLIQNAS*IHGQSL
Trigger: TAGGGACTGCCCATGAATTCAAGAAGCATTTTGAAT...AAGGTACTTATACGTCCGCCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCCTTCTTGTGGCTCTaGCGCTGGAAGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQAFLWL*RWKIFS
Trigger: GGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp TCACTAGCAGCAGCGTCTCGACCCTTCAAAATTGGCAATTCAAAATGCTTCTTGTGTCAATTTCTGGCTTaGACTCTGGACTCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: SLAAASRPFKIGNSKCFLCQFLA*TLDSGV
Trigger: TACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACA...CAAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAGACGCTGCTGCTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCACTACTTTGTCACTaGTACGGCTTCGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQALLCH*YGFGSP
Trigger: CGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGAATTAACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTGGATGGGGCACTACTTTGTCACTaGTACGGCTTCGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: GINKMYQAEILKQIILDGALLCH*YGFGSP
Trigger: CGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGC...CCCATCCAGAATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTGTTAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQLLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp TTCAAAATTGGCAATTCAAAATGCTTCTTGAATTCATGGGCAGTCCCTAGGATGCTCCTCAATGGTCCCTaGAGACAGCAGGCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: FKIGNSKCFLNSWAVPRMLLNGP*RQQAVD
Trigger: ATCTACCGCCTGCTGTCTGCAGGGACCATTGAGGAG...CATCCTAGGGACTGCCCATGAATTCAAGAAGCATTTTGAATTGCCAATTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCATCCACCACACAGCTaGTCAGTGCCTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQHPPHS*SVPSCG
Trigger: GCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTGGCGCTCTACATCCTaGTCCTCATCCACCACACAG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQWRSTS*SSSTTQ
Trigger: CTGTGTGGTGGATGAGGAGCAGGATGTAGAGCGCCA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCTGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQLPGLK*SQNHQG
Trigger: CCCCTGATGGTTCTGACTGCACTTCAGACCTGGCAG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCTTCAGGTTTTCTCTTaGCCAGCTGGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQLQVFS*PAGWEP
Trigger: TGGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTAGTTCTTCACCAGGCTaGAAGGCGACACCACCACTG +
Preference number: 4 (lower is better)
Translates to: TNDLLNLHRQIFRKDIRSSSSPG*KATPPL
Trigger: CAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACT...ACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CCA 90 bp CTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAACCCTGGCTCCACGCTaGTTCATGAATCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQQTTCSIFTGRYLERISTLAPR*FMNPSS
Trigger: GCTGGAAGGATTCATGAACCAGCGTGGAGCCAGGGT...TGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGATCTTACCTGACAGCTaGGGCTCCAGGGCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQILPDS*GSRALE
Trigger: CTCTAAGGCCCTGGAGCCCCAGCTGTCAGGTAAGAT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACACTTATCAGTGCAGTaGTTCCACCCTGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQHLSVQ*FHPARS
Trigger: AGACCTGGCAGGGTGGAACCACTGCACTGATAAGTG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCACTTATCAGTGCAGTaGTTCCACCCTGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRHLSVQ*FHPARS
Trigger: AGACCTGGCAGGGTGGAACCACTGCACTGATAAGTG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTTCAACAGGGCCCTGTaGAGCAAGGAGCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQFNRAL*SKEPLF
Trigger: GAAAAGGGGCTCCTTGCTCCACAGGGCCCTGTTGAA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
3UTR CAA 72 bp ACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTCTTGTATAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: TLILPSSNSSAG*ACLRNLLYNSV
Trigger: GACTGAGTTATACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGTGTCCACATCAATGTaGTGCACTGCAGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKVSTSM*CTAASF
Trigger: GAAAGACGCTGCAGTGCATCACATTGATGTGGACAC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACTCCACGCTGGTTCATaGATCCTTCCAGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKLHAGS*ILPAFG
Trigger: ACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCTCCACGCTGGTTCATaGATCCTTCCAGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRLHAGS*ILPAFG
Trigger: ACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACTCCACGCTGGTTCATaGATCCTTCCAGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQLHAGS*ILPAFG
Trigger: ACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGTCCCTCGTCACATATaGCCAGACCAACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRVPRHI*PDQHFL
Trigger: AAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGAC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATTCTCAGAGTTCTTaGGCCTGTGTCCCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQDSQSS*ACVPRH
Trigger: GTGACGAGGGACACAGGCTCAAGAACTCTGAGAATC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AGACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGCAAAATGTACCAAGCTaGAATACTCAAGCAGATCAT +
Preference number: 4 (lower is better)
Translates to: RHTHLALKQFFCRFGLSQQNVPS*NTQADH
Trigger: ATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTG...CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGGCTCGATGGACTATTaGAGCGTTCTACAACCTTGG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKGSMDY*SVLQPW
Trigger: CCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGGCTCGATGGACTATTaGAGCGTTCTACAACCTTGG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQGSMDY*SVLQPW
Trigger: CCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGCTCGATGGACTATTaGAGCGTTCTACAACCTTGG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRGSMDY*SVLQPW
Trigger: CCAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAATCAATGTGATGCACTaGAGCGTCTTTCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQINVMH*SVFPRP
Trigger: GGGCCTAGGAAAGACGCTGCAGTGCATCACATTGAT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAGGCGACACCACCACTaGCTTGTCAATTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKRRHHH*LVNFWL
Trigger: AAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTCTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TCSIFTGRYLERISEVLRLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...ACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp TGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACAATGCTTCGAATAAATaGTTCTTGTACTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: CRQQAVDIASLLLTISPDNASNK*FLYSVG
Trigger: GCCTACTGAGTACAAGAAGCATTTATTCGAAGCATT...GTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGAAATTTCCCAGGGCTaGAGGTGGAAACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKEISQG*RWKPGS
Trigger: TGATCCTGGTTTCCACCTCCAGCCCTGGGAAATTTC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTGGGGAGGGCGAGTCTaGAGAAAGGAAATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQWGGRV*RKEISQ
Trigger: CTGGGAAATTTCCTTTCTCCAGACTCGCCCTCCCCA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATGCTTCTTGAATTCATaGGCAGTCCCTAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKCFLNS*AVPRMP
Trigger: CGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTGCTTCTTGAATTCATaGGCAGTCCCTAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRCFLNS*AVPRMP
Trigger: CGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTTGCTTCTTGAATTCATaGGCAGTCCCTAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: NDLLNLHRQIFRKDIRSPCFLNS*AVPRMP
Trigger: CGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCA...AGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATGCTTCTTGAATTCATaGGCAGTCCCTAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQCFLNS*AVPRMP
Trigger: CGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp TCAGAAACCTCTTGTATAACTCAGTCTGAAGGGGTGTCAGCCTACAACAAACGAATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: SETSCITQSEGVSAYNKRILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...TCGTTTGTTGTAGGCTGACACCCCTTCAGACTGAGTTATACAAGAGGTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGAGATCTTCTCCTCAATaGTCCCTGCAGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQRSSPQ*SLQTAG
Trigger: GCCTGCTGTCTGCAGGGACCATTGAGGAGAAGATCT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTTTGGAACCAAACTGTaGGAGTGGCCGTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQFGTKL*EWPSPI
Trigger: TATTGGGGACGGCCACTCTCACAGTTTGGTTCCAAA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAACGTCAAGTACCCATaGGCCAAAGGTCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRNVKYP*AKGQKQ
Trigger: CTGCTTTTGACCTTTGGCTCATGGGTACTTGACGTT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAACGTCAAGTACCCATaGGCCAAAGGTCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQNVKYP*AKGQKQ
Trigger: CTGCTTTTGACCTTTGGCTCATGGGTACTTGACGTT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTGTCCACATCAATGTaGTGCACTGCAGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQVSTSM*CTAASF
Trigger: GAAAGACGCTGCAGTGCATCACATTGATGTGGACAC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTCCCTCGTCACATATaGCCAGACCAACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQVPRHI*PDQHFL
Trigger: AAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGAC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp CAAAGCCATCCTCCTCTTCCACACACTTATCATAGATTAGAGCTGGATGATTACTTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: QSHPPLPHTYHRLELDDYLYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...GTAATCATCCAGCTCTAATCTATGATAAGTGTGTGGAAGAGGAGGATGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCATCATCACAGGACCTaGCTTCAGGTTTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRHHHRT*LQVFSW
Trigger: CCAAGAGAAAACCTGAAGGCAGGTCCTGTGATGATG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACATCATCACAGGACCTaGCTTCAGGTTTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKHHHRT*LQVFSW
Trigger: CCAAGAGAAAACCTGAAGGCAGGTCCTGTGATGATG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAATGCTTCATGCTGACTaGTGTCCAGACAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQMLHAD*CPDKVV
Trigger: AACCACCTTGTCTGGACAGCAGTCAGCATGAAGCAT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATGCTTCATGCTGACTaGTGTCCAGACAAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRMLHAD*CPDKVV
Trigger: AACCACCTTGTCTGGACAGCAGTCAGCATGAAGCAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000671528.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGATCAATGTGATGCACTaGAGCGTCTTTCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQINVMH*SVFPRP
Trigger: GGGCCTAGGAAAGACGCTGCAGTGCATCACATTGAT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATGTCAATTTCTGGCTTaGACTCTGGACTCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKCQFLA*TLDSGV
Trigger: TACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATGTCAATTTCTGGCTTaGACTCTGGACTCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQCQFLA*TLDSGV
Trigger: TACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTGTCAATTTCTGGCTTaGACTCTGGACTCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRCQFLA*TLDSGV
Trigger: TACGCCAGAGTCCAGAGTGCAAGCCAGAAATTGACA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp CAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAAGGCGACACCACCACTaGCTTGTCAATTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QQTTCSIFTGRYLERISERRHHH*LVNFWL
Trigger: AAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCT...TTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR GCA 90 bp ATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTACGTAAGAAAGATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: MGEDTLAPRWFMNPYVRKIGNSK*FLNSWA
Trigger: TGCCCATGAATTCAAGAAGCATTTTGAATTGCCAAT...CTTTCTTACGTAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473251.2
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DLLNLHRQIFRKDIRSPPKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...CGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACCAGGAACTGGTGTTTaGAACCAAACTGTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKPGTGV*NQTVRV
Trigger: CACTCTCACAGTTTGGTTCCAAACACCAGTTCCTGG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAAACACTCCTGGATCTaGGTCTCACTGCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKKHSWI*VSLLDF
Trigger: GAAATCCAGCAGTGAGACCCAGATCCAGGAGTGTTT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGTCAACAACCACATaGACAGGGAGTTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQGSTTT*TGSFSL
Trigger: CAAGGAGAAACTCCCTGTCCATGTGGTTGTTGACCC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATTGCACTCTGGACTCTaGCGTAAAAGTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKLHSGL*RKSVHI
Trigger: GATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATGCCTTGTCAATTTCTaGCTTGCACTCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQCLVNF*LALWTL
Trigger: CAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTTGCCTTGTCAATTTCTaGCTTGCACTCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: NDLLNLHRQIFRKDIRSPCLVNF*LALWTL
Trigger: CAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCA...AGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTGCCTTGTCAATTTCTaGCTTGCACTCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRCLVNF*LALWTL
Trigger: CAGAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTGGCTTGTTCATCATTaGCTGGGTTCCAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQWLVHH*LGSSQG
Trigger: ACCCTGACTGGAACCCAGCCAATGATGAACAAGCCA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
3UTR CAA 72 bp TCTCGACCCTTCAAAATTGGCAATTCAAAATGCTTCTaGAATTCATGGGCAGTCCCTAGGATGCCGGAATTA +
Preference number: 4 (lower is better)
Translates to: SRPFKIGNSKCF*NSWAVPRMPEL
Trigger: TAATTCCGGCATCCTAGGGACTGCCCATGAATTCAAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGGGCTGCTACATTATTaGGAGGACCGGCTAATTAAA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQGLLHY*EDRLIK
Trigger: TTTAATTAGCCGGTCCTCTCAATAATGTAGCAGCCC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATAAATGCTTCATGCTaGCTGCTGTCCAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKINASC*LLSRQG
Trigger: ACCTTGTCTGGACAGCAGTCAGCATGAAGCATTTAT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQLYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKLYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRLYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGATCTGTAGAGGGGGCTaGTACATTATTGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQICRGG*YIIERT
Trigger: GGTCCTCTCAATAATGTAGCAGCCCCCTCTACAGAT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKLQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCTCAAGCAATTCTTCTaGCGGTTTGGCTTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQLKQFF*RFGLSQ
Trigger: CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGAAACACTCCTGGATCTaGGTCTCACTGCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQKHSWI*VSLLDF
Trigger: GAAATCCAGCAGTGAGACCCAGATCCAGGAGTGTTT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGAATTAACAAAATGTACCAAGCTGAAATACTCAAGCAGATCATTCTGGATGGGAAACACTCCTGGATCTaGGTCTCACTGCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: GINKMYQAEILKQIILDGKHSWI*VSLLDF
Trigger: GAAATCCAGCAGTGAGACCCAGATCCAGGAGTGTTT...CCCATCCAGAATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTGTTAATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAAAGTCAGGGCTCGATaGACTATTGAAGCGTTCTAC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQKVRAR*TIEAFY
Trigger: GTAGAACGCTTCAATAGTCCATCGAGCCCTGACTTT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAAAGTCAGGGCTCGATaGACTATTGAAGCGTTCTAC +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRKVRAR*TIEAFY
Trigger: GTAGAACGCTTCAATAGTCCATCGAGCCCTGACTTT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGATAAATGCTTCATGCTaGCTGCTGTCCAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQINASC*LLSRQG
Trigger: ACCTTGTCTGGACAGCAGTCAGCATGAAGCATTTAT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000671528.1
CDS-3UTR TCA 90 bp ACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTTTGTATAACTCAGTCTaGAGGGGTGTCAGCCTACAA +
Preference number: 4 (lower is better)
Translates to: TNDLLNLHRQIFRKDIRSLYNSV*RGVSLQ
Trigger: TTGTAGGCTGACACCCCTTCAGACTGAGTTATACAA...ACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQLQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp CAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAACTACAACAAACGACCTaGTCAATCTTCACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QQTTCSIFTGRYLERISELQQTT*SIFTGR
Trigger: TCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG...TTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAATCCATCCAGGAACTaGTGTTTGGAACCAAACTGT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRNPSRN*CLEPNC
Trigger: ACAGTTTGGTTCCAAACACCAGTTCCTGGATGGATT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGACAAGGTGGTTGATTaGTTAGCTGACTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRDKVVD*LADSKV
Trigger: AACCTTTGAGTCAGCTAACCAATCAACCACCTTGTC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp CTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAATTCTTCTGCCGGTTTaGCTTGTCTCAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: LQQTTCSIFTGRYLERISILLPV*LVSETS
Trigger: AGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAAT...TGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGAAAGTCAGGGCTCGATaGACTATTGAAGCGTTCTAC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQKVRAR*TIEAFY
Trigger: GTAGAACGCTTCAATAGTCCATCGAGCCCTGACTTT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAATTCAAAATGCTTCTTaGATTCATGGGCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQIQNAS*IHGQSL
Trigger: TAGGGACTGCCCATGAATTCAAGAAGCATTTTGAAT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATTCAAAATGCTTCTTaGATTCATGGGCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRIQNAS*IHGQSL
Trigger: TAGGGACTGCCCATGAATTCAAGAAGCATTTTGAAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAATGCTTCGAATAAATaGTTCATGCTGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQNASNK*FMLTAV
Trigger: GACAGCAGTCAGCATGAAGCATTTATTCGAAGCATT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000671528.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp CTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAAAGACACACTCATCTTaGCCTCAAGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LQQTTCSIFTGRYLERISKTHSS*PQAILL
Trigger: CAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTT...TGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGACAAGGTGGTTGATTaGTTAGCTGACTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQDKVVD*LADSKV
Trigger: AACCTTTGAGTCAGCTAACCAATCAACCACCTTGTC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAAAATGTACCAAGCTaGAATACTCAAGCAGATCAT +
Preference number: 4 (lower is better)
Translates to: GKHHAALLDDFLPENKIQQNVPS*NTQADH
Trigger: ATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR TCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCAAAATGTACCAAGCTaGAATACTCAAGCAGATCAT +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRQNVPS*NTQADH
Trigger: ATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR GCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGAATGCTTCGAATAAATaGTTCATGCTGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQNASNK*FMLTAV
Trigger: GACAGCAGTCAGCATGAAGCATTTATTCGAAGCATT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000671528.1
CDS-3UTR TCA 90 bp CTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCACAAAATGTACCAAGCTaGAATACTCAAGCAGATCAT +
Preference number: 4 (lower is better)
Translates to: LQQTTCSIFTGRYLERISQNVPS*NTQADH
Trigger: ATGATCTGCTTGAGTATTTCAGCTTGGTACATTTTG...TGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
CDS-3UTR GCA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRIGNSK*FLNSWA
Trigger: TGCCCATGAATTCAAGAAGCATTTTGAATTGCCAAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR GCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTGGCAATTCAAAATaGTTCTTGAATTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKIGNSK*FLNSWA
Trigger: TGCCCATGAATTCAAGAAGCATTTTGAATTGCCAAT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAATCGACCCTTCAAAATTaGCAATTCAAAATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ILGKHHAALLDDFLPENKSTLQN*QFKMLL
Trigger: AAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGA...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTCGACCCTTCAAAATTaGCAATTCAAAATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KHHAALLDDFLPENKIQQSTLQN*QFKMLL
Trigger: AAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CCA 90 bp CTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCATCGACCCTTCAAAATTaGCAATTCAAAATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LQQTTCSIFTGRYLERISSTLQN*QFKMLL
Trigger: AAGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGA...TGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000655446.1
ENST00000661701.1
CDS GCA 90 bp CTCCTCGACCCGCCAAGACCGGGTCAATCGAACCTCCCGCCGCGCTaGCGTCGTATCACCCATTGGCTGCGTTCGATGAGTTCGGCGCTC +
Preference number: 5 (lower is better)
Translates to: LLDPPRPGQSNLPPR*RRITHWLRSMSSAL
Trigger: GAGCGCCGAACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCGGCGGGAGGTTCGATTGACCCGGTCTTGGCGGGTCGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS CCA 90 bp CCGGGTCAATCGAACCTCCCGCCGCGCTGCCGTCGTATCACCCATTaGCTGCGTTCGATGAGTTCGGCGCTCGCGACCCAAGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: PGQSNLPPRCRRITH*LRSMSSALATQGRG
Trigger: GCCTCTTCCTTGGGTCGCGAGCGCCGAACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCGGCGGGAGGTTCGATTGACCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS TCA 90 bp ACCTCCCGCCGCGCTGCCGTCGTATCACCCATTGGCTGCGTTCGATaGGTTCGGCGCTCGCGACCCAAGGAAGAGGCGGGAATAGTGCTG +
Preference number: 5 (lower is better)
Translates to: TSRRAAVVSPIGCVR*VRRSRPKEEAGIVL
Trigger: CAGCACTATTCCCGCCTCTTCCTTGGGTCGCGAGCGCCGAACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCGGCGGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS-3UTR CAA 90 bp AGCTACACCCAGACCAGCTGGTTATCAGCGGAGGCCCCGCTGCTCCTCATGAGACCTTCAGGTTTTCTCTaGGCCAGCTGGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SYTQTSWLSAEAPLLLMRPSGFL*ASWLGA
Trigger: GGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAGG...TCTCATGAGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGGTCTGGGTGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS CCA 90 bp TGGGGAGGGCGAGTCTGGAGAAAGGAAATTTCCCAGGGCTGGAGGTaGAAACCAGGATCAGACTCAGGGAGGTCGAGCAGGAAGCCACGC +
Preference number: 5 (lower is better)
Translates to: WGGRVWRKEISQGWR*KPGSDSGRSSRKPR
Trigger: GCGTGGCTTCCTGCTCGACCTCCCTGAGTCTGATCCTGGTTTCCACCTCCAGCCCTGGGAAATTTCCTTTCTCCAGACTCGCCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CAA 90 bp AGGCTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGCCTTCAGGTTTTCTCTaGGCCAGCTGGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: RLIQNQGIFFQGVMEGPAPSGFL*ASWLGA
Trigger: GGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAGG...CGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CAA 90 bp GGGTGGCCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGGACCCGGGCCATGGCTaGTTCATCATTGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GWPDLTAVDTTSAVQPVMDPGHG*FIIGWV
Trigger: AACCCAGCCAATGATGAACAAGCCATGGCCCGGGTC...CATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp CCTGCTCCTCATCCACCACACAGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGACCCGGGCCATGGCTaGTTCATCATTGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: PAPHPPHSCSVPSCGSDADPGHG*FIIGWV
Trigger: AACCCAGCCAATGATGAACAAGCCATGGCCCGGGTC...AGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTGTGTGGTGGATGAGGAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS GCA 90 bp TGCTCACCACTAGGCCAGGTTGCCAGTCTTCATCATCACAGGACCTaGCTTCAGGTTTTCTCTTGGCCAGCTGGCTGGGAGCCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSPLGQVASLHHHRT*LQVFSWPAGWEPSS
Trigger: GGAGCTTGGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAGGCAGGTCCTGTGATGATGAAGACTGGCAACCTGGCCTAGTGGTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS CCA 90 bp TGGAATTCGGCCCGTCTCGGGTGTTTGTCCCAGGTCGGTGAGCTGTaGTCCCGCAGCTATGGAAGGGAAGATTTACGCCACATTGAGCAG +
Preference number: 5 (lower is better)
Translates to: WNSARLGCLSQVGEL*SRSYGREDLRHIEQ
Trigger: CTGCTCAATGTGGCGTAAATCTTCCCTTCCATAGCTGCGGGACCACAGCTCACCGACCTGGGACAAACACCCGAGACGGGCCGAATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS CCA 90 bp GCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACCTaGGAAGAGCAGCAACCAGCAGTCCCCTACTGGCTGTCCCAATGG +
Preference number: 5 (lower is better)
Translates to: ASGHRQNIIQDQHLT*EEQQPAVPYWLSQW
Trigger: CCATTGGGACAGCCAGTAGGGGACTGCTGGTTGCTGCTCTTCCCAGGTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664182.1
CDS-3UTR CAA 90 bp TCTCGCCAGACCCGGGCCATGGCTTGTTCATCATTGGCTGGGTTCCAGTCAGGGATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: SRQTRAMACSSLAGFQSGIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...CCCTGACTGGAACCCAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS CCA 90 bp AAAGAGGGGGCATGGATGGCGGGAATCCATCCAGGAACTGGTGTTTaGAACCAAACTGTGAGAGTGGCCGTCCCCAATAAGCCGAGACGA +
Preference number: 5 (lower is better)
Translates to: KEGAWMAGIHPGTGV*NQTVRVAVPNKPRR
Trigger: TCGTCTCGGCTTATTGGGGACGGCCACTCTCACAGTTTGGTTCCAAACACCAGTTCCTGGATGGATTCCCGCCATCCATGCCCCCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS-3UTR CAA 90 bp CTCATACAGAACCAAGGCATCTTTTTCCAGGGGGTCATGGAGGGCCCGGCGGACACAGGGAGTTTCTCCTaGTCAAGCTTCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LIQNQGIFFQGVMEGPADTGSFS*SSFSWS
Trigger: TGACCAGCTGAAGCTTGACAAGGAGAAACTCCCTGT...GTCCGCCGGGCCCTCCATGACCCCCTGGAAAAAGATGCCTTGGTTCTGTATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS TCA 90 bp GGATGGCGGGAATCCATCCAGGAACTGGTGTTTGGAACCAAACTGTaGGAGTGGCCGTCCCCAATAAGCCGAGACGAGAGATTAGGCCAA +
Preference number: 5 (lower is better)
Translates to: GWRESIQELVFGTKL*EWPSPISRDERLGQ
Trigger: TTGGCCTAATCTCTCGTCTCGGCTTATTGGGGACGGCCACTCTCACAGTTTGGTTCCAAACACCAGTTCCTGGATGGATTCCCGCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS TCA 90 bp ACAGCTGGGGATTATGAAAGGCGGCACATTTCTGGGAGTTTGGATTaGATCTACAGTGGTACCAGGTCTAGAGCGGAGGGCCGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: TAGDYERRHISGSLD*IYSGTRSRAEGRGW
Trigger: CCAACCCCGGCCCTCCGCTCTAGACCTGGTACCACTGTAGATTCAATCCAAACTCCCAGAAATGTGCCGCCTTTCATAATCCCCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS CCA 90 bp AGTGGACAGCTGGGGATTATGAAAGGCGGCACATTTCTGGGAGTTTaGATTGAATCTACAGTGGTACCAGGTCTAGAGCGGAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SGQLGIMKGGTFLGV*IESTVVPGLERRAG
Trigger: CCCGGCCCTCCGCTCTAGACCTGGTACCACTGTAGATTCAATCCAAACTCCCAGAAATGTGCCGCCTTTCATAATCCCCAGCTGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS-3UTR CAA 90 bp GTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGATCGATGGCCAGAGGTaGGATCCTCCCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: VTYDQTNTSFLEDSNMKAIDGQR*DPPSEP
Trigger: TGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGAT...CGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp GTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: VKHDQPVSPNEIEATAPSNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...GCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp TCTCGCCAGACCCGGGCCATGGCTTGTTCATCATTGGCTGGGTTCCAGTCAGGGGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SRQTRAMACSSLAGFQSGEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...CCCTGACTGGAACCCAGCCAATGATGAACAAGCCATGGCCCGGGTCTGGCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp CCGGATCTGACGGCTGTTGACACAACGTCGGCAGTGCAACCTGTCATGTGTGTCATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: PDLTAVDTTSAVQPVMCVIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...GACACACATGACAGGTTGCACTGCCGACGTTGTGTCAACAGCCGTCAGATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GTCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: VRVKHDQPVSPNEIEATAIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...GGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp CCCCAGCCCTTTTCAGGCCCAATGCTCGAGAGCCCAGAGGACCTTGATAATTTGAGAGCCCAGAGGACCTaGATAATTTGGAATGGGGAC +
Preference number: 5 (lower is better)
Translates to: PQPFSGPMLESPEDLDNLRAQRT*IIWNGD
Trigger: GTCCCCATTCCAAATTATCAAGGTCCTCTGGGCTCT...CAAATTATCAAGGTCCTCTGGGCTCTCGAGCATTGGGCCTGAAAAGGGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS-3UTR CAA 90 bp TCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTCCCTGGACACCACCACTGCCTaGTCAATTTCTGGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: SVPSCGSDAGRSSPQWSLDTTTA*SISGLH
Trigger: GTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTC...CAGGGACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp TCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCCCAGCTTTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: SNMTSRLAPMRLRPQPPAFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...AGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp CAGAGGTTGGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTTCTTGACACCAGCACTACTTaGTCACTGCTACGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: QRLDPPSEPFPNLIVPVLDTSTT*SLLRLR
Trigger: CCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTC...AAGAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCAACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp CACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: HCYGFGSPPEYNPGPASYMACSS*AGFQSG
Trigger: CCCTGACTGGAACCCAGCCAATGATGAACAAGCCAT...GTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp CTCAATGGTCCCTGCAGACAGCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCGACCCGGGCCATGGCTaGTTCATCATTGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: LNGPCRQQAVDIASLLLTDPGHG*FIIGWV
Trigger: AACCCAGCCAATGATGAACAAGCCATGGCCCGGGTC...GGTCAAAAGAAGACTTGCTATATCTACCGCCTGCTGTCTGCAGGGACCATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp TCAGGGTCAAACATGACCAGCCGGTTAGCCCCAATGAGATTGAGGCCACAGCCCGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGSNMTSRLAPMRLRPQPEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...GGGCTGTGGCCTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GCAGGCGGTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCGGGCCAAAGCGTTCTACAACCTaGGCTCGCTTCTTAATGGAC +
Preference number: 5 (lower is better)
Translates to: AGGRYSKSSFDHLARPGPKRSTT*ARFLMD
Trigger: GTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTT...TGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTACCGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTGGGCTCGATGGACTATaGAAGCGTTCTACAACCTTG +
Preference number: 5 (lower is better)
Translates to: AAQCLLVALTLEDLLLNGGLDGL*KRSTTL
Trigger: CAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCC...ACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAACTCGCCCAGAATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: VSLRLASSRINSSFNSPRMACSS*AGFQSG
Trigger: CCCTGACTGGAACCCAGCCAATGATGAACAAGCCAT...TCTGGGCGAGTTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp TTGAGCCTGTGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSLCPSSHMTRPTLPFWRMACSS*AGFQSG
Trigger: CCCTGACTGGAACCCAGCCAATGATGAACAAGCCAT...CCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACACAGGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS GCA 90 bp CTCATTGTACCAGTTCTTCACCAGGCTGGAAGGCGACACCACCACTaGCTTGTCAATTTCTGGCTTGCACTCTGGACTTTGTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LIVPVLHQAGRRHHH*LVNFWLALWTLSSF
Trigger: GAAGCTTGACAAAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACTGGTACAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463715.5
CDS-3UTR CAA 90 bp TGGATCCTCCCTCCGAGCCATTTCCCAACCTCATTGTACCAGTTCTTCACCAGGCATTTCCCAACCTCATaGTACCAGTTCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: WILPPSHFPTSLYQFFTRHFPTS*YQFFTR
Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATG...CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATGGCTCGGAGGGAGGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp TCAGAAACCTCTTGTATAACTCAGTCTGAAGGGGTGTCAGCCTACAACAAACGAATCGATGGCCAGAGGTaGGATCCTCCCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: SETSCITQSEGVSAYNKRIDGQR*DPPSEP
Trigger: TGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGAT...TCGTTTGTTGTAGGCTGACACCCCTTCAGACTGAGTTATACAAGAGGTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp AGCTGCTCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: SCSVPSCGSDAGRSSPQWFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...CCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp ATTGAAGCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATCGTGCCATCCAGGACACCAGCACTACTTaGTCACTGCTACGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: IEAFYNLGSLLNGHRAIQDTSTT*SLLRLR
Trigger: CCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTC...CTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTTCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GTAGATATAGCAAGTCTTCTTTTGACCATCTCGCCAGACCCGGGCCATGGCTTGGGGCTCGATGGACTATaGAAGCGTTCTACAACCTTG +
Preference number: 5 (lower is better)
Translates to: VDIASLLLTISPDPGHGLGLDGL*KRSTTL
Trigger: CAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCC...CAAGCCATGGCCCGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTATATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGAAATGATGAGGATGGGAGACAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: EDSNMKAEGLIGNDEDGRQAVQG*VSLILR
Trigger: TCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTG...TCTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp GACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGTTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: DQHFLSGGLQHEGGRSHRFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...CCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp TCAGTGCCTTCTTGTGGCTCTGACGCTGGAAGATCTTCTCCTCAATGGTCCCTGGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SVPSCGSDAGRSSPQWSLEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...CAGGGACCATTGAGGAGAAGATCTTCCAGCGTCAGAGCCACAAGAAGGCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp TTGAGCCTGTGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGAAGCGTTCTACAACCTaGGCTCGCTTCTTAATGGAC +
Preference number: 5 (lower is better)
Translates to: LSLCPSSHMTRPTLPFWRKRSTT*ARFLMD
Trigger: GTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTT...CCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACACAGGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp AGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTCCAGCTTTTGGTCTATGGGCTCGATGGACTATaGAAGCGTTCTACAACCTTG +
Preference number: 5 (lower is better)
Translates to: RRHPGSTLVHESFQLLVYGLDGL*KRSTTL
Trigger: CAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCC...ATAGACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp TCGACACCAGCACTACTTTGTCACTGCTACGGCTTCGGGTCACCGCCAGAATATATCATGCAGCCCTTCTaGATGATTTTCTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: STPALLCHCYGFGSPPEYIMQPF*MIFSQR
Trigger: TCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGAT...ATATTCTGGCGGTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACCTGACAGCTGGGGCTTCGAATAAATGCTTCTaGTACTCAGTAGGCAACGTG +
Preference number: 5 (lower is better)
Translates to: GSPPEYNPGPASYLTAGASNKCF*YSVGNV
Trigger: CACGTTGCCTACTGAGTACAAGAAGCATTTATTCGA...AGCCCCAGCTGTCAGGTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS CCA 90 bp ACCCAGCAGCTTCATGCTGACTGCTGTCCAGACAAGGTGGTTGATTaGTTAGCTGACTCAAAGGTTTCCGAAAAGGAGACAGGAAACACT +
Preference number: 5 (lower is better)
Translates to: TQQLHADCCPDKVVD*LADSKVSEKETGNT
Trigger: AGTGTTTCCTGTCTCCTTTTCGGAAACCTTTGAGTCAGCTAACCAATCAACCACCTTGTCTGGACAGCAGTCAGCATGAAGCTGCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACCTTCAGGTTTTCTCTaGGCCAGCTGGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKPSGFL*ASWLGA
Trigger: GGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAGG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCCTTCAGGTTTTCTCTaGGCCAGCTGGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRPSGFL*ASWLGA
Trigger: GGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAGG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp TGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACTCCAACACATTTCCCAACCTCATaGTACCAGTTCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: CPSSHMTRPTLPFWRTPTHFPTS*YQFFTR
Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATG...TGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATCGATGGCCAGAGGTaGGATCCTCCCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKIDGQR*DPPSEP
Trigger: TGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGAT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GCGTTCTACAACCTTGGCTCGCTTCTTAATGGACATCGTGCCATCCAGGCGGACCTCGACCCTTCAAAATaGGCAATTCAAAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: AFYNLGSLLNGHRAIQADLDPSK*AIQNAS
Trigger: AGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAG...GTCCGCCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCCTTCAGGTTTTCTCTaGGCCAGCTGGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQPSGFL*ASWLGA
Trigger: GGCTCCCAGCCAGCTGGCCAAGAGAAAACCTGAAGG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGGACACCACCACTGCCTaGTCAATTTCTGGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: DLLNLHRQIFRKDIRSPPDTTTA*SISGLH
Trigger: GTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTC...CGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGATCGATGGCCAGAGGTaGGATCCTCCCTCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQIDGQR*DPPSEP
Trigger: TGGCTCGGAGGGAGGATCCAACCTCTGGCCATCGAT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GAGCCTGTGTCCCTCGTCACATATGACCAGACCAACACTTCCTTTCTGGAGGACAATTCAAAATGCTTCTaGAATTCATGGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: EPVSLVTYDQTNTSFLEDNSKCF*NSWAVP
Trigger: AGGGACTGCCCATGAATTCAAGAAGCATTTTGAATT...GTCCTCCAGAAAGGAAGTGTTGGTCTGGTCATATGTGACGAGGGACACAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp CACTGCTACGGCTTCGGGTCACCGCCAGAATATAATCCAGGACCAGCATCTTACAATTCAAAATGCTTCTaGAATTCATGGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: HCYGFGSPPEYNPGPASYNSKCF*NSWAVP
Trigger: AGGGACTGCCCATGAATTCAAGAAGCATTTTGAATT...GTAAGATGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGTAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp AGGCACCCACAAAGCCATCCTCCTCTTCCACACACTTATCATAGATTAGAGCTGTTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: RHPQSHPPLPHTYHRLELFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...CAGCTCTAATCTATGATAAGTGTGTGGAAGAGGAGGATGGCTTTGTGGGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp AACCTGTCATGTGTGTCACTGAGGCTAGCTTCATCCAGGATAAACAGCTCCTTCAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: NLSCVSLRLASSRINSSFNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...GAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTCAGTGACACACATGACAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459678.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GTTCAAGCTGTCCAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: VQAVQGLVSLILRVLEPVEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...CACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGACCCGGGCCATGGCTaGTTCATCATTGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQDPGHG*FIIGWV
Trigger: AACCCAGCCAATGATGAACAAGCCATGGCCCGGGTC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AGACACACTCATCTTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGATCATGCAGCCCTTCTaGATGATTTTCTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: RHTHLALKQFFCRFGLSQIMQPF*MIFSQR
Trigger: TCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGAT...CTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp ATGGGAGAAGACACCCTGGCTCCACGCTGGTTCATGAATCCTTACGTAAGAAAGCTCCGTACCCAGCTTTaGGTCTATTTCATCCTTAGA +
Preference number: 5 (lower is better)
Translates to: MGEDTLAPRWFMNPYVRKLRTQL*VYFILR
Trigger: TCTAAGGATGAAATAGACCAAAAGCTGGGTACGGAG...CTTTCTTACGTAAGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
CDS-3UTR CAA 90 bp GACCAACACTTCCTTTCTGGAGGACTCCAACATGAAGGCGGAAGGTCTCATAGGGAATCCTTCCAGCTTTaGGTCTATTTCATCCTTAGA +
Preference number: 5 (lower is better)
Translates to: DQHFLSGGLQHEGGRSHRESFQL*VYFILR
Trigger: TCTAAGGATGAAATAGACCAAAAGCTGGAAGGATTC...CCTATGAGACCTTCCGCCTTCATGTTGGAGTCCTCCAGAAAGGAAGTGTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp GTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: VSLQQTTCSIFTGRYLERQAVQG*VSLILR
Trigger: TCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTG...CCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
CDS-3UTR CAA 90 bp CAGGGCTTGGTAAGTCTGATTCTCAGAGTTCTTGAGCCTGTGTCCCTCGTCACACTCGACCCTTCAAAATaGGCAATTCAAAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: QGLVSLILRVLEPVSLVTLDPSK*AIQNAS
Trigger: AGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAG...TGTGACGAGGGACACAGGCTCAAGAACTCTGAGAATCAGACTTACCAAGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473251.2
ENST00000655446.1
CDS-3UTR CAA 90 bp AGGGGTGTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: RGVSLQQTTCSIFTGRYLNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...TAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGACACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGACACCAGCACTACTTaGTCACTGCTACGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRDTSTT*SLLRLR
Trigger: CCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTC...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGACACCAGCACTACTTaGTCACTGCTACGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKDTSTT*SLLRLR
Trigger: CCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGACACCAGCACTACTTaGTCACTGCTACGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQDTSTT*SLLRLR
Trigger: CCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AGGGGTGTCAGCCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAAAGCGTTCTACAACCTaGGCTCGCTTCTTAATGGAC +
Preference number: 5 (lower is better)
Translates to: RGVSLQQTTCSIFTGRYLKRSTT*ARFLMD
Trigger: GTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTT...TAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGGCTGACACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGACCCGGGCCATGGCTaGTTCATCATTGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQDPGHG*FIIGWV
Trigger: AACCCAGCCAATGATGAACAAGCCATGGCCCGGGTC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp CTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTATAGAGTGCAGCCATCTTaGTTAGGGCTCCGTACCCAG +
Preference number: 5 (lower is better)
Translates to: LLNLHRQIFRKDIRSPPYRVQPS*LGLRTQ
Trigger: CTGGGTACGGAGCCCTAACAAAGATGGCTGCACTCT...ATACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
CDS-3UTR CAA 90 bp ACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTAGAGCCCAGAGGACCTaGATAATTTGGAATGGGGAC +
Preference number: 5 (lower is better)
Translates to: TCSIFTGRYLERISEVLRRAQRT*IIWNGD
Trigger: GTCCCCATTCCAAATTATCAAGGTCCTCTGGGCTCT...ACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGACACCACCACTGCCTaGTCAATTTCTGGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKDTTTA*SISGLH
Trigger: GTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKMACSS*AGFQSG
Trigger: CCCTGACTGGAACCCAGCCAATGATGAACAAGCCAT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRMACSS*AGFQSG
Trigger: CCCTGACTGGAACCCAGCCAATGATGAACAAGCCAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAGAGCCCAGAGGACCTaGATAATTTGGAATGGGGAC +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQRAQRT*IIWNGD
Trigger: GTCCCCATTCCAAATTATCAAGGTCCTCTGGGCTCT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAACAGGGAGTTTCTCCTaGTCAAGCTTCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQTGSFS*SSFSWS
Trigger: TGACCAGCTGAAGCTTGACAAGGAGAAACTCCCTGT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAACAGGGAGTTTCTCCTaGTCAAGCTTCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKTGSFS*SSFSWS
Trigger: TGACCAGCTGAAGCTTGACAAGGAGAAACTCCCTGT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp TGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTATCACAGGGAGTTTCTCCTaGTCAAGCTTCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: CSIFTGRYLERISEVLRITGSFS*SSFSWS
Trigger: TGACCAGCTGAAGCTTGACAAGGAGAAACTCCCTGT...GATACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRQAVQG*VSLILR
Trigger: TCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTG...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTCCGTAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: TCSIFTGRYLERISEVLRNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...ACGGAGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGGGCTCGATGGACTATaGAAGCGTTCTACAACCTTG +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQGLDGL*KRSTTL
Trigger: CAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGGGCTCGATGGACTATaGAAGCGTTCTACAACCTTG +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKGLDGL*KRSTTL
Trigger: CAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGATGGCTTGTTCATCATaGGCTGGGTTCCAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQMACSS*AGFQSG
Trigger: CCCTGACTGGAACCCAGCCAATGATGAACAAGCCAT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAATAGCAAGTCTTCTTTaGACCATCTCGCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQIASLL*TISPDP
Trigger: CGGGTCTGGCGAGATGGTCAAAAGAAGACTTGCTAT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGACAGGGAGTTTCTCCTaGTCAAGCTTCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQTGSFS*SSFSWS
Trigger: TGACCAGCTGAAGCTTGACAAGGAGAAACTCCCTGT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACATTTCCCAACCTCATaGTACCAGTTCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKHFPTS*YQFFTR
Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACATTTCCCAACCTCATaGTACCAGTTCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQHFPTS*YQFFTR
Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATG...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQQAVQG*VSLILR
Trigger: TCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCAAGCTGTCCAGGGCTaGGTAAGTCTGATTCTCAGA +
Preference number: 5 (lower is better)
Translates to: TNDLLNLHRQIFRKDIRSQAVQG*VSLILR
Trigger: TCTGAGAATCAGACTTACCAAGCCCTGGACAGCTTG...ACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
CDS-3UTR CAA 90 bp TTGCCCTCAAGCAATTCTTCTGCCGGTTTGGCTTGTCTCAGAAACCTCTTGTATCTCGACCCTTCAAAATaGGCAATTCAAAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: LPSSNSSAGLACLRNLLYLDPSK*AIQNAS
Trigger: AGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAG...ATACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATTGCTTGAGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473251.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGTTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAATTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp CCTACAACAAACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: PTTNDLLNLHRQIFRKDINSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...GATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTTTGTTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAAGCGTTCTACAACCTaGGCTCGCTTCTTAATGGAC +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRKRSTT*ARFLMD
Trigger: GTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAAAGCGTTCTACAACCTaGGCTCGCTTCTTAATGGAC +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKKRSTT*ARFLMD
Trigger: GTCCATTAAGAAGCGAGCCAAGGTTGTAGAACGCTT...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGGGCTCGATGGACTATaGAAGCGTTCTACAACCTTG +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQGLDGL*KRSTTL
Trigger: CAAGGTTGTAGAACGCTTCAATAGTCCATCGAGCCC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCATTTCCCAACCTCATaGTACCAGTTCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQHFPTS*YQFFTR
Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGGGAAATG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGTTCTGCCGGTTTGGCTaGTCTCAGAAACCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQFCRFG*SQKPLV
Trigger: TACAAGAGGTTTCTGAGACAAGCCAAACCGGCAGAA...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGAATTCTTCTGCCGGTTaGGCTTGTCTCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQNSSAG*ACLRNL
Trigger: GAGGTTTCTGAGACAAGCCAAACCGGCAGAAGAATT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AACGACCTGCTCAATCTTCACAGGCAGATATTTAGAAAGGATATCAGAAGTCCTGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: NDLLNLHRQIFRKDIRSPEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...AGGACTTCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000473251.2
ENST00000476687.2
ENST00000655446.1
ENST00000661701.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAATCATGCAGCCCTTCTaGATGATTTTCTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQIMQPF*MIFSQR
Trigger: TCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGAT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGATCATGCAGCCCTTCTaGATGATTTTCTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRIMQPF*MIFSQR
Trigger: TCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGAT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAAGACACACTCATCTaGCCCTCAAGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQEDTLI*PSSNSS
Trigger: AGAAGAATTGCTTGAGGGCAAGATGAGTGTGTCTTC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000488942.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAGAATCCTTCCAGCTTTaGGTCTATTTCATCCTTAGA +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKESFQL*VYFILR
Trigger: TCTAAGGATGAAATAGACCAAAAGCTGGAAGGATTC...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAGAATCCTTCCAGCTTTaGGTCTATTTCATCCTTAGA +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQESFQL*VYFILR
Trigger: TCTAAGGATGAAATAGACCAAAAGCTGGAAGGATTC...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAATTCAAAATGCTTCTaGAATTCATGGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: NIMQPFLMIFSQRTKFNRNSKCF*NSWAVP
Trigger: AGGGACTGCCCATGAATTCAAGAAGCATTTTGAATT...CCTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAAAATTCAAAATGCTTCTaGAATTCATGGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: GKHHAALLDDFLPENKIQNSKCF*NSWAVP
Trigger: AGGGACTGCCCATGAATTCAAGAAGCATTTTGAATT...TTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAACTCGACCCTTCAAAATaGGCAATTCAAAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: ILGKHHAALLDDFLPENKLDPSK*AIQNAS
Trigger: AGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAG...TTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGGAATCCTTCCAGCTTTaGGTCTATTTCATCCTTAGA +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQESFQL*VYFILR
Trigger: TCTAAGGATGAAATAGACCAAAAGCTGGAAGGATTC...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGAATTCAAAATGCTTCTaGAATTCATGGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQNSKCF*NSWAVP
Trigger: AGGGACTGCCCATGAATTCAAGAAGCATTTTGAATT...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000671528.1
CDS-3UTR CAA 90 bp AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAACAAAATTCAACAGCTCGACCCTTCAAAATaGGCAATTCAAAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: KHHAALLDDFLPENKIQQLDPSK*AIQNAS
Trigger: AGAAGCATTTTGAATTGCCAATTTTGAAGGGTCGAG...CTGTTGAATTTTGTTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000371975.9
ENST00000442598.5
ENST00000655446.1
ENST00000661701.1
ENST00000671528.1
CDS TCA 72 bp CGCGCTGCCGTCGTATCACCCATTGGCTGCGTTCGATaGGTTCGGCGCTCGCGACCCAAGGAAGAGGCGGGA +
Preference number: 6 (lower is better)
Translates to: RAAVVSPIGCVR*VRRSRPKEEAG
Trigger: TCCCGCCTCTTCCTTGGGTCGCGAGCGCCGAACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS CCA 72 bp TCGAACCTCCCGCCGCGCTGCCGTCGTATCACCCATTaGCTGCGTTCGATGAGTTCGGCGCTCGCGACCCAA +
Preference number: 6 (lower is better)
Translates to: SNLPPRCRRITH*LRSMSSALATQ
Trigger: TTGGGTCGCGAGCGCCGAACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCGGCGGGAGGTTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS CAA 72 bp ATCGAACCTCCCGCCGCGCTGCCGTCGTATCACCCATaGGCTGCGTTCGATGAGTTCGGCGCTCGCGACCCA +
Preference number: 6 (lower is better)
Translates to: IEPPAALPSYHP*AAFDEFGARDP
Trigger: TGGGTCGCGAGCGCCGAACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCGGCGGGAGGTTCGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS CAA 90 bp ACCGGGTCAATCGAACCTCCCGCCGCGCTGCCGTCGTATCACCCATaGGCTGCGTTCGATGAGTTCGGCGCTCGCGACCCAAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: TGSIEPPAALPSYHP*AAFDEFGARDPRKR
Trigger: CCTCTTCCTTGGGTCGCGAGCGCCGAACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCGGCGGGAGGTTCGATTGACCCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS GCA 72 bp CCGCCAAGACCGGGTCAATCGAACCTCCCGCCGCGCTaGCGTCGTATCACCCATTGGCTGCGTTCGATGAGT +
Preference number: 6 (lower is better)
Translates to: PPRPGQSNLPPR*RRITHWLRSMS
Trigger: ACTCATCGAACGCAGCCAATGGGTGATACGACGGCAGCGCGGCGGGAGGTTCGATTGACCCGGTCTTGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000661174.1
ENST00000668390.1
CDS TCA 72 bp CACCATGCCCGTCCTGCCATCTATTCACAATGCTGGTaGGCTCCCGCAGCCGCTCCTCTCCTAGCTGCCTGT +
Preference number: 6 (lower is better)
Translates to: HHARPAIYSQCW*APAAAPLLAAC
Trigger: ACAGGCAGCTAGGAGAGGAGCGGCTGCGGGAGCTCACCAGCATTGTGAATAGATGGCAGGACGGGCATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661701.1
CDS CCA 72 bp GCCCGTCTCGGGTGTTTGTCCCAGGTCGGTGAGCTGTaGTCCCGCAGCTATGGAAGGGAAGATTTACGCCAC +
Preference number: 6 (lower is better)
Translates to: ARLGCLSQVGEL*SRSYGREDLRH
Trigger: GTGGCGTAAATCTTCCCTTCCATAGCTGCGGGACCACAGCTCACCGACCTGGGACAAACACCCGAGACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS CCA 72 bp AGAGGGGGCATGGATGGCGGGAATCCATCCAGGAACTaGTGTTTGGAACCAAACTGTGAGAGTGGCCGTCCC +
Preference number: 6 (lower is better)
Translates to: RGGMDGGNPSRN*CLEPNCESGRP
Trigger: GGGACGGCCACTCTCACAGTTTGGTTCCAAACACCAGTTCCTGGATGGATTCCCGCCATCCATGCCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS TCA 72 bp ACTCAAGCAGATCATTCTGGATGGGAGTTCCGGAGATaGGCACCCGCCGGCTGGTGTTCAAGCTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TQADHSGWEFRR*APAGWCSSFSW
Trigger: CCAGCTGAAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAATGATCTGCTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487700.1
CDS TCA 72 bp TTGTACTCAGTAGGCAACGTGGCCTCTCACCCACTCTaGGTACAGCCATGCAGATCAGCCCAGACCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LYSVGNVASHPL*VQPCRSAQTQQ
Trigger: CTGCTGGGTCTGGGCTGATCTGCATGGCTGTACTCAGAGTGGGTGAGAGGCCACGTTGCCTACTGAGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655446.1
CDS CCA 72 bp CGAGTCTGGAGAAAGGAAATTTCCCAGGGCTGGAGGTaGAAACCAGGATCAGACTCAGGGAGGTCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RVWRKEISQGWR*KPGSDSGRSSR
Trigger: CCTGCTCGACCTCCCTGAGTCTGATCCTGGTTTCCACCTCCAGCCCTGGGAAATTTCCTTTCTCCAGACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS CAA 90 bp GTGAGCTGTGGTCCCGCAGCTATGGAAGGGAAGATTTACGCCACATaGAGCAGCAGGGGAGTTACCACCTGTAGTGGACAGCTGGGGATT +
Preference number: 6 (lower is better)
Translates to: VSCGPAAMEGKIYAT*SSRGVTTCSGQLGI
Trigger: AATCCCCAGCTGTCCACTACAGGTGGTAACTCCCCTGCTGCTCAATGTGGCGTAAATCTTCCCTTCCATAGCTGCGGGACCACAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS TCA 72 bp CTTGCACTCTGGACTTTGTCAAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGCTCATACAGAACCAAG +
Preference number: 6 (lower is better)
Translates to: LALWTLSSFSWS*ALSGGGSYRTK
Trigger: CTTGGTTCTGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAAGTCCAGAGTGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463715.5
CDS TCA 72 bp GTCCCGCAGCTATGGAAGGGAAGATTTACGCCACATTaGGCAGCAGGGGAGTTACCACCTGTAGTGGACAGC +
Preference number: 6 (lower is better)
Translates to: VPQLWKGRFTPH*AAGELPPVVDS
Trigger: GCTGTCCACTACAGGTGGTAACTCCCCTGCTGCTCAATGTGGCGTAAATCTTCCCTTCCATAGCTGCGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS CCA 72 bp CACCGCCAGAATATAATCCAGGACCAGCATCTTACCTaGGAAGAGCAGCAACCAGCAGTCCCCTACTGGCTG +
Preference number: 6 (lower is better)
Translates to: HRQNIIQDQHLT*EEQQPAVPYWL
Trigger: CAGCCAGTAGGGGACTGCTGGTTGCTGCTCTTCCCAGGTAAGATGCTGGTCCTGGATTATATTCTGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664182.1
CDS CAA 72 bp GGTCCCGCAGCTATGGAAGGGAAGATTTACGCCACATaGAGCAGCAGGGGAGTTACCACCTGTAGTGGACAG +
Preference number: 6 (lower is better)
Translates to: GPAAMEGKIYAT*SSRGVTTCSGQ
Trigger: CTGTCCACTACAGGTGGTAACTCCCCTGCTGCTCAATGTGGCGTAAATCTTCCCTTCCATAGCTGCGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS TCA 72 bp TACCAGTGCACATACTTGTCAAGCTTCAGCTGGTCATaGGCGCTCAGCGGGGGAGGCTCATACAGAACCAAG +
Preference number: 6 (lower is better)
Translates to: YQCTYLSSFSWS*ALSGGGSYRTK
Trigger: CTTGGTTCTGTATGAGCCTCCCCCGCTGAGCGCTCATGACCAGCTGAAGCTTGACAAGTATGTGCACTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000668565.1
CDS GCA 72 bp CCAGTTCTTCACCAGGCTGGAAGGCGACACCACCACTaGCTTGTCAATTTCTGGCTTGCACTCTGGACTTTG +
Preference number: 6 (lower is better)
Translates to: PVLHQAGRRHHH*LVNFWLALWTL
Trigger: CAAAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463715.5
CDS TCA 72 bp GAATCCATCCAGGAACTGGTGTTTGGAACCAAACTGTaGGAGTGGCCGTCCCCAATAAGCCGAGACGAGAGA +
Preference number: 6 (lower is better)
Translates to: ESIQELVFGTKL*EWPSPISRDER
Trigger: TCTCTCGTCTCGGCTTATTGGGGACGGCCACTCTCACAGTTTGGTTCCAAACACCAGTTCCTGGATGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371975.9
ENST00000655446.1
CDS GCA 72 bp TTTCCGTTTCCTAGGAGTCTTCCCTGTCCCCTTGAGTaGTCACCACTAGGCCAGGTTGCCAGTCTTCATCAT +
Preference number: 6 (lower is better)
Translates to: FPFPRSLPCPLE*SPLGQVASLHH
Trigger: ATGATGAAGACTGGCAACCTGGCCTAGTGGTGAGCACTCAAGGGGACAGGGAAGACTCCTAGGAAACGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657122.1
CDS CAA 72 bp GAAAGCAGCAGGCTGTGCAGGAGAGTGCAGCCATCTTaGTTAGGGCTCCGTACCCAGCTTTTGGTCTATTTC +
Preference number: 6 (lower is better)
Translates to: ESSRLCRRVQPS*LGLRTQLLVYF
Trigger: GAAATAGACCAAAAGCTGGGTACGGAGCCCTAACAAAGATGGCTGCACTCTCCTGCACAGCCTGCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473251.2
CDS CAA 90 bp TTGTACCAGTTCTTCACCAGGCTGGAAGGCGACACCACCACTGCCTaGTCAATTTCTGGCTTGCACTCTGGACTTTGTCAAGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: LYQFFTRLEGDTTTA*SISGLHSGLCQASA
Trigger: AGCTGAAGCTTGACAAAGTCCAGAGTGCAAGCCAGAAATTGACAAGGCAGTGGTGGTGTCGCCTTCCAGCCTGGTGAAGAACTGGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463715.5
CDS CAA 90 bp TGCAGGAGAGTGCAGCCATCTTTGTTAGGGCTCCGTACCCAGCTTTaGGTCTATTTCATCCTTAGATCCTCCATCGATGGCCAGAGGTTG +
Preference number: 6 (lower is better)
Translates to: CRRVQPSLLGLRTQL*VYFILRSSIDGQRL
Trigger: CAACCTCTGGCCATCGATGGAGGATCTAAGGATGAAATAGACCAAAAGCTGGGTACGGAGCCCTAACAAAGATGGCTGCACTCTCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
CDS TCA 72 bp GATTATGAAAGGCGGCACATTTCTGGGAGTTTGGATTaGATCTACAGTGGTACCAGGTCTAGAGCGGAGGGC +
Preference number: 6 (lower is better)
Translates to: DYERRHISGSLD*IYSGTRSRAEG
Trigger: GCCCTCCGCTCTAGACCTGGTACCACTGTAGATTCAATCCAAACTCCCAGAAATGTGCCGCCTTTCATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS TCA 72 bp GGGGAGTTACCACCTGTAGTGGACAGCTGGGGATTATaGAAGGCGGCACATTTCTGGGAGTTTGGATTGAAT +
Preference number: 6 (lower is better)
Translates to: GELPPVVDSWGL*KAAHFWEFGLN
Trigger: ATTCAATCCAAACTCCCAGAAATGTGCCGCCTTTCATAATCCCCAGCTGTCCACTACAGGTGGTAACTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS CCA 72 bp ATGATGAGGATGGGAGAAGACACCCTGGCTCCACGCTaGTTCATGAATCCCAGCTTTTGGTCTATTTCATCC +
Preference number: 6 (lower is better)
Translates to: MMRMGEDTLAPR*FMNPSFWSISS
Trigger: GGATGAAATAGACCAAAAGCTGGGATTCATGAACCAGCGTGGAGCCAGGGTGTCTTCTCCCATCCTCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472889.2
CDS CCA 72 bp CTGGGGATTATGAAAGGCGGCACATTTCTGGGAGTTTaGATTGAATCTACAGTGGTACCAGGTCTAGAGCGG +
Preference number: 6 (lower is better)
Translates to: LGIMKGGTFLGV*IESTVVPGLER
Trigger: CCGCTCTAGACCTGGTACCACTGTAGATTCAATCCAAACTCCCAGAAATGTGCCGCCTTTCATAATCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668390.1
CDS CAA 72 bp GTGCAGCCATCTTTGTTAGGGCTCCGTACCCAGCTTTaGGTCTATTTCATCCTTAGATCCTCCATCGATGGC +
Preference number: 6 (lower is better)
Translates to: VQPSLLGLRTQL*VYFILRSSIDG
Trigger: GCCATCGATGGAGGATCTAAGGATGAAATAGACCAAAAGCTGGGTACGGAGCCCTAACAAAGATGGCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473251.2
CDS TCA 72 bp CCAGCATCTTACGATTACAAAGCTTCTTTAGCGAGGTaGTGGAAGAAAGGGAAGACACACTCATCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: PASYDYKASLAR*WKKGKTHSSCP
Trigger: AGGGCAAGATGAGTGTGTCTTCCCTTTCTTCCATCACCTCGCTAAAGAAGCTTTGTAATCGTAAGATGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488942.5
CDS CCA 72 bp CGCAAAACCTTACTGAGAATAGGGTCAACAACCACATaGACAGGGAGTTTCTCCCTTGATAATTTGGAATGG +
Preference number: 6 (lower is better)
Translates to: RKTLLRIGSTTT*TGSFSLDNLEW
Trigger: CCATTCCAAATTATCAAGGGAGAAACTCCCTGTCCATGTGGTTGTTGACCCTATTCTCAGTAAGGTTTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493032.5
CDS TCA 72 bp AGTATGCGTGCATATACAGAGAACCAAAACTGCTTATaGAATACCAGTGCACATACTTGTCAAGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SMRAYTENQNCL*NTSAHTCQASA
Trigger: AGCTGAAGCTTGACAAGTATGTGCACTGGTATTTCATAAGCAGTTTTGGTTCTCTGTATATGCACGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668565.1