Pregenerated sensors for RAD54B (Homo sapiens)
Ensembl gene IDs: ENSG00000197275Ensembl transcript IDs: ENST00000297592.5, ENST00000336148.10, ENST00000463267.5, ENST00000518358.1, ENST00000518998.5, ENST00000519348.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACTGGCTTGCCTCCATAGGGTCCCTGACACTGCAGGGTCCAGATaGGCGAAATACATTGCAATGTCTTCCCTAAACCCATTTCATCAG | + |
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Preference number: 1 (lower is better) Translates to: LLACLHRVPDTAGSR*AKYIAMSSLNPFHQ Trigger: CTGATGAAATGGGTTTAGGGAAGACATTGCAATGTATTTCGCTCATCTGGACCCTGCAGTGTCAGGGACCCTATGGAGGCAAGCCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| 3UTR CCA 90 bp | AAGAGGGAAACAGTTCTTATTGAATACCCACTGGTGATTCTTATCTaGTCGTGGCATAACGAGGGAATTTGGCGTATATGGGTCATGGCG | + |
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Preference number: 1 (lower is better) Translates to: KRETVLIEYPLVILI*SWHNEGIWRIWVMA Trigger: CGCCATGACCCATATACGCCAAATTCCCTCGTTATGCCACGACCAGATAAGAATCACCAGTGGGTATTCAATAAGAACTGTTTCCCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| 3UTR TCA 90 bp | ACTACATCCACAAGAGGGAAACAGTTCTTATTGAATACCCACTGGTaGTTCTTATCTGGTCGTGGCATAACGAGGGAATTTGGCGTATAT | + |
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Preference number: 1 (lower is better) Translates to: TTSTRGKQFLLNTHW*FLSGRGITREFGVY Trigger: ATATACGCCAAATTCCCTCGTTATGCCACGACCAGATAAGAATCACCAGTGGGTATTCAATAAGAACTGTTTCCCTCTTGTGGATGTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| 3UTR CCA 90 bp | CTAGAGAATGTTTTAGTGGATATTTACTTCTATCGAATAGCGGGATaGAAATTACACAAAGAAAAACTAAGTGCTGGTCTCTGCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LENVLVDIYFYRIAG*KLHKEKLSAGLCSA Trigger: GGCAGAGCAGAGACCAGCACTTAGTTTTTCTTTGTGTAATTTCCATCCCGCTATTCGATAGAAGTAAATATCCACTAAAACATTCTCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| 3UTR TCA 90 bp | ATTTTTGAAATTCTTTCTTCCAATTATTCACCAAGCTTCCAGGTGTaGCAATTAGTGTCTTCTTTATTACTGGCTTGCCTCCATAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: IFEILSSNYSPSFQV*QLVSSLLLACLHRV Trigger: GACCCTATGGAGGCAAGCCAGTAATAAAGAAGACACTAATTGTCACACCTGGAAGCTTGGTGAATAATTGGAAGAAAGAATTTCAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| 3UTR CCA 90 bp | TCCCATTACACATTCATAAAGGAATATGATTCCTTCTTTCTGATGTaGTCGAAGATGATATACAAGGTAAGGATCAATCACTACATCCAC | + |
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Preference number: 1 (lower is better) Translates to: SHYTFIKEYDSFFLM*SKMIYKVRINHYIH Trigger: GTGGATGTAGTGATTGATCCTTACCTTGTATATCATCTTCGACCACATCAGAAAGAAGGAATCATATTCCTTTATGAATGTGTAATGGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| 3UTR TCA 90 bp | TGTACTAATTCATGTTCTTCTCTTTGCTCTAAAGTATCACTCTGTTaGGAATTTAAAACCAGTGGAGGAGGTGGTTTAATGTCTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: CTNSCSSLCSKVSLC*EFKTSGGGGLMSSS Trigger: AGAAGAAGACATTAAACCACCTCCTCCACTGGTTTTAAATTCTCAACAGAGTGATACTTTAGAGCAAAGAGAAGAACATGAATTAGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCATTACACATTCATAAAGGAATATGATTCCTTCTTTCTGATGTGGTCGAAGAACACCTGCCACTGCTaGAGTCATCTGGAGAGATTA | + |
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Preference number: 2 (lower is better) Translates to: SHYTFIKEYDSFFLMWSKNTCHC*SHLERL Trigger: TAATCTCTCCAGATGACTTCAGCAGTGGCAGGTGTT...CTTCGACCACATCAGAAAGAAGGAATCATATTCCTTTATGAATGTGTAATGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGAACCAGTGGAGGAGGTaGTTTAATGTCTTCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SPWNRRWRRCHSHINRGKNQWRR*FNVFFL Trigger: CAAGAAGAAGACATTAAACCACCTCCTCCACTGGTT...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGTTAATGTCTTCTTCTTaGTTCACCTCCACTGTAATA | + |
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Preference number: 2 (lower is better) Translates to: SPWNRRWRRCHSHINRGKLMSSS*FTSTVI Trigger: TATTACAGTGGAGGTGAAGCAAGAAGAAGACATTAA...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| 3UTR CCA 72 bp | TCCAAGCTGAAAACACCTGCCACTGCTGAAGTCATCTaGAGAGATTACACCCATGACTTCTATTTCTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SKLKTPATAEVI*RDYTHDFYFFS Trigger: GGAAAAGAAATAGAAGTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGTGGCAGGTGTTTTCAGCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| 3UTR GCA 72 bp | GCTGTAGTTGTCTTAATGGCACTGTTCTTCAAACGATaGCCCTCGTCACAGATTAGAAGATCAAATTTTATA | + |
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Preference number: 3 (lower is better) Translates to: AVVVLMALFFKR*PSSQIRRSNFI Trigger: TATAAAATTTGATCTTCTAATCTGTGACGAGGGGCATCGTTTGAAGAACAGTGCCATTAAGACAACTACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| 3UTR GCA 72 bp | TGGAAATTACACAAAGAAAAACTAAGTGCTGGTCTCTaGTCTGCCATAAATAGCTTTGTTACCCTAAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: WKLHKEKLSAGL*SAINSFVTLSK Trigger: CTTACTTAGGGTAACAAAGCTATTTATGGCAGAGCAGAGACCAGCACTTAGTTTTTCTTTGTGTAATTTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| 3UTR CCA 72 bp | GTTTTAGTGGATATTTACTTCTATCGAATAGCGGGATaGAAATTACACAAAGAAAAACTAAGTGCTGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: VLVDIYFYRIAG*KLHKEKLSAGL Trigger: GAGACCAGCACTTAGTTTTTCTTTGTGTAATTTCCATCCCGCTATTCGATAGAAGTAAATATCCACTAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR GCA 90 bp | CCTGGCAACCTGAGAAGAATGCGAGATAGCAGTACTTCCTCCTCCAAGCTGAAAACTGGTACCAGCCTGTaGCTCCTCATCCAAGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PGNLRRMRDSSTSSSKLKTGTSL*LLIQVC Trigger: GCAAACTTGGATGAGGAGGCACAGGCTGGTACCAGT...TTTCAGCTTGGAGGAGGAAGTACTGCTATCTCGCATTCTTCTCAGGTTGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | CCTGGCAACCTGAGAAGAATGCGAGATAGCAGTACTTCCTCCTCCAAGCTGAAAGGCGTATATGGGTCATaGCGTGGTTTGCAATTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGNLRRMRDSSTSSSKLKGVYGS*RGLQFW Trigger: CCAAAATTGCAAACCACGCCATGACCCATATACGCC...TTTCAGCTTGGAGGAGGAAGTACTGCTATCTCGCATTCTTCTCAGGTTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | GCCACTGCTGAAGTCATCTGGAGAGATTACACCCATGACTTCTATTTCTTTTCCCCCCTGCAACTGACTTaGTGCTGCAGATCGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ATAEVIWRDYTHDFYFFSPLQLT*CCRSSH Trigger: ATGAGACGATCTGCAGCACCAAGTCAGTTGCAGGGG...GGAAAAGAAATAGAAGTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGTGGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CCA 90 bp | AACCTGAGAAGAATGCGAGATAGCAGTACTTCCTCCTCCAAGCTGAAAACACCTTCTGACAGAAACCACTaGCCCTGCAAAGAAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: NLRRMRDSSTSSSKLKTPSDRNH*PCKEVL Trigger: AAGGACTTCTTTGCAGGGCCAGTGGTTTCTGTCAGA...AGGTGTTTTCAGCTTGGAGGAGGAAGTACTGCTATCTCGCATTCTTCTCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR TCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGGAATTCCCCTGCAACTaGCTTGGTGCTGCAGATCGT | + |
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Preference number: 4 (lower is better) Translates to: SPWNRRWRRCHSHINRGKEFPCN*LGAADR Trigger: ACGATCTGCAGCACCAAGTCAGTTGCAGGGGAATTC...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGCCCCTGCAACTGACTTaGTGCTGCAGATCGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SPWNRRWRRCHSHINRGKPLQLT*CCRSSH Trigger: ATGAGACGATCTGCAGCACCAAGTCAGTTGCAGGGG...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | CAGTGGAGGAGGTGGTTTAATGTCTTCTTCTTGCTTCACCTCCACTGTAATAGCCTCTTCATTCAGACCTaGATTACTTCTTCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QWRRWFNVFFLLHLHCNSLFIQT*ITSSWR Trigger: CCTCCAGGAAGAAGTAATCCAGGTCTGAATGAAGAG...GCTATTACAGTGGAGGTGAAGCAAGAAGAAGACATTAAACCACCTCCTCCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR GCA 90 bp | AACGAGGGAATTTGGCGTATATGGGTCATGGCGTGGTTTGCAATTTTGGAAATCCAACTGACTTGGTGCTaGAGATCGTCTCATATTCAG | + |
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Preference number: 4 (lower is better) Translates to: NEGIWRIWVMAWFAILEIQLTWC*RSSHIQ Trigger: CTGAATATGAGACGATCTGCAGCACCAAGTCAGTTG...GATTTCCAAAATTGCAAACCACGCCATGACCCATATACGCCAAATTCCCTCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR GCA 90 bp | GCCACTGCTGAAGTCATCTGGAGAGATTACACCCATGACTTCTATTTCTTTTCCCTGCAACTGACTTGGTaGTGCAGATCGTCTCATATT | + |
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Preference number: 4 (lower is better) Translates to: ATAEVIWRDYTHDFYFFSLQLTW*CRSSHI Trigger: AATATGAGACGATCTGCAGCACCAAGTCAGTTGCAG...GGAAAAGAAATAGAAGTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR GCA 90 bp | ATTCTCATATCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTACTGGTACCAGCCTGTaGCTCCTCATCCAAGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: ILISTEESEGDKDLSITCTGTSL*LLIQVC Trigger: GCAAACTTGGATGAGGAGGCACAGGCTGGTACCAGT...ACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGATATGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR GCA 90 bp | CAGTGGAGGAGGTGGTTTAATGTCTTCTTCTTGCTTCACCTCCACTGTAATAGCCAAAGAAAAACTAAGTaGTGGTCTCTGCTCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QWRRWFNVFFLLHLHCNSQRKTK*WSLLCH Trigger: ATGGCAGAGCAGAGACCAGCACTTAGTTTTTCTTTG...GCTATTACAGTGGAGGTGAAGCAAGAAGAAGACATTAAACCACCTCCTCCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | GCCACTGCTGAAGTCATCTGGAGAGATTACACCCATGACTTCTATTTCTTTTCCCTCTTCATTCAGACCTaGATTACTTCTTCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ATAEVIWRDYTHDFYFFSLFIQT*ITSSWR Trigger: CCTCCAGGAAGAAGTAATCCAGGTCTGAATGAAGAG...GGAAAAGAAATAGAAGTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGTTACCTGTAGTGAACTaGTACCAGCCTGTGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SPWNRRWRRCHSHINRGKLPVVN*YQPVPP Trigger: AGGAGGCACAGGCTGGTACCAGTTCACTACAGGTAA...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR TCA 90 bp | ATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTGAATTCCCCTGCAACTaGCTTGGTGCTGCAGATCGT | + |
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Preference number: 4 (lower is better) Translates to: ISFPQIISVWPSSIFSSSEFPCN*LGAADR Trigger: ACGATCTGCAGCACCAAGTCAGTTGCAGGGGAATTC...AGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTGAATTCCCCTGCAACTaGCTTGGTGCTGCAGATCGT | + |
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Preference number: 4 (lower is better) Translates to: FFSTNHQCLALFNLFKLFEFPCN*LGAADR Trigger: ACGATCTGCAGCACCAAGTCAGTTGCAGGGGAATTC...AAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CCA 90 bp | TGGTCGAAGATGATATACAAGGTAAGGATCAATCACTACATCCACAAGAGGGAACTGGTGATTCTTATCTaGTCGTGGCATAACGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: WSKMIYKVRINHYIHKRELVILI*SWHNEG Trigger: TCCCTCGTTATGCCACGACCAGATAAGAATCACCAG...TTCCCTCTTGTGGATGTAGTGATTGATCCTTACCTTGTATATCATCTTCGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR GCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGCAACTGACTTGGTGCTaGAGATCGTCTCATATTCAG | + |
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Preference number: 4 (lower is better) Translates to: SPWNRRWRRCHSHINRGKQLTWC*RSSHIQ Trigger: CTGAATATGAGACGATCTGCAGCACCAAGTCAGTTG...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR GCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGCTGCAACTGACTTGGTaGTGCAGATCGTCTCATATT | + |
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Preference number: 4 (lower is better) Translates to: SPWNRRWRRCHSHINRGKLQLTW*CRSSHI Trigger: AATATGAGACGATCTGCAGCACCAAGTCAGTTGCAG...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR GCA 90 bp | TCTCCTTGGAATAGAAGATGGAGACGATGTCATTCTCATATCAACAGAGGAAAGTCTTCCTCTAGCTGCTaGCTTCTTTTCAATCCATCC | + |
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Preference number: 4 (lower is better) Translates to: SPWNRRWRRCHSHINRGKSSSSC*LLFNPS Trigger: GGATGGATTGAAAAGAAGGCAGCAGCTAGAGGAAGA...CTTTCCTCTGTTGATATGAGAATGACATCGTCTCCATCTTCTATTCCAAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTGTCTGACAGAAACCACTaGCCCTGCAAAGAAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SFPQIISVWPSSIFSSSLSDRNH*PCKEVL Trigger: AAGGACTTCTTTGCAGGGCCAGTGGTTTCTGTCAGA...CAAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTGCATAACGAGGGAATTTaGCGTATATGGGTCATGGCG | + |
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Preference number: 4 (lower is better) Translates to: SFPQIISVWPSSIFSSSLHNEGI*RIWVMA Trigger: CGCCATGACCCATATACGCCAAATTCCCTCGTTATG...CAAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR TCA 90 bp | TCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTACTAATTCACAAGTTTGCACTGTATaGGGTGGATCTAATGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: STEESEGDKDLSITCTNSQVCTV*GGSNVA Trigger: GGCAACATTAGATCCACCTCATACAGTGCAAACTTG...TGAATTAGTACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | TTACACAAAGAAAAACTAAGTGCTGGTCTCTGCTCTGCCATAAATAGCTTTGTTTCTGACAGAAACCACTaGCCCTGCAAAGAAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LHKEKLSAGLCSAINSFVSDRNH*PCKEVL Trigger: AAGGACTTCTTTGCAGGGCCAGTGGTTTCTGTCAGA...AACAAAGCTATTTATGGCAGAGCAGAGACCAGCACTTAGTTTTTCTTTGTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | GCCACTGCTGAAGTCATCTGGAGAGATTACACCCATGACTTCTATTTCTTTTCCCAAATCATCAGTGTTTaGCCCTCTTCAATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: ATAEVIWRDYTHDFYFFSQIISV*PSSIFS Trigger: TGAAAAGATTGAAGAGGGCCAAACACTGATGATTTG...GGAAAAGAAATAGAAGTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CCA 90 bp | TTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTGGAATTTGGCGTATATaGGTCATGGCGTGGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FLFHKSSVFGPLQSFQALGIWRI*VMAWFA Trigger: TGCAAACCACGCCATGACCCATATACGCCAAATTCC...AAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTGTGTCTTCTTTATTACTaGCTTGCCTCCATAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SFPQIISVWPSSIFSSSLCLLYY*LASIGS Trigger: GGACCCTATGGAGGCAAGCCAGTAATAAAGAAGACA...CAAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR TCA 90 bp | TTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTCAAGTTTGCACTGTATaGGGTGGATCTAATGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: FFSTNHQCLALFNLFKLFQVCTV*GGSNVA Trigger: GGCAACATTAGATCCACCTCATACAGTGCAAACTTG...AAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR TCA 90 bp | TATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTCTTTAGGAGCCGAATaGACTGTAGTGAACTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: YFFSTNHQCLALFNLFKLSLGAE*TVVNWY Trigger: GTACCAGTTCACTACAGTTCATTCGGCTCCTAAAGA...GAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR GCA 90 bp | CCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTGAATTTACAACTGACTTGGTGCTaGAGATCGTCTCATATTCAG | + |
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Preference number: 4 (lower is better) Translates to: PQIISVWPSSIFSSSLNLQLTWC*RSSHIQ Trigger: CTGAATATGAGACGATCTGCAGCACCAAGTCAGTTG...TAAATTCAAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR GCA 90 bp | TCCCATTACACATTCATAAAGGAATATGATTCCTTCTTTCTGATGTGGTCGAAGTTGTTCCTTGGACACTaGTACTTCTTTAGGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SHYTFIKEYDSFFLMWSKLFLGH*YFFRSR Trigger: TCGGCTCCTAAAGAAGTAGCAGTGTCCAAGGAACAA...CTTCGACCACATCAGAAAGAAGGAATCATATTCCTTTATGAATGTGTAATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR GCA 90 bp | ACACTGAAATATTTAACTAGGCTATCAGATTTCTCTTCTTGTTCCTTGGACACTTCTTTATTACTGGCTTaGCTCCATAGGGTCCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TLKYLTRLSDFSSCSLDTSLLLA*LHRVPD Trigger: GTCAGGGACCCTATGGAGGCAAGCCAGTAATAAAGA...AGTGTCCAAGGAACAAGAAGAGAAATCTGATAGCCTAGTTAAATATTTCAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR GCA 90 bp | TATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCCTGTTCTTCAAACGATaGCCCTCGTCACAGATTAGA | + |
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Preference number: 4 (lower is better) Translates to: YFFSTNHQCLALFNLFKLLFFKR*PSSQIR Trigger: TCTAATCTGTGACGAGGGGCATCGTTTGAAGAACAG...GAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | TCCCATTACACATTCATAAAGGAATATGATTCCTTCTTTCTGATGTGGTCGAAGCTCTTCATTCAGACCTaGATTACTTCTTCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SHYTFIKEYDSFFLMWSKLFIQT*ITSSWR Trigger: CCTCCAGGAAGAAGTAATCCAGGTCTGAATGAAGAG...CTTCGACCACATCAGAAAGAAGGAATCATATTCCTTTATGAATGTGTAATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | TCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTACTAATTCAAACCAGTGGAGGAGGTaGTTTAATGTCTTCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: STEESEGDKDLSITCTNSNQWRR*FNVFFL Trigger: CAAGAAGAAGACATTAAACCACCTCCTCCACTGGTT...TGAATTAGTACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | TCCCATTACACATTCATAAAGGAATATGATTCCTTCTTTCTGATGTGGTCGAAGACTGCTGAAGTCATCTaGAGAGATTACACCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: SHYTFIKEYDSFFLMWSKTAEVI*RDYTHD Trigger: GTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGT...CTTCGACCACATCAGAAAGAAGGAATCATATTCCTTTATGAATGTGTAATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | TATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCACTGCTGAAGTCATCTaGAGAGATTACACCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: YFFSTNHQCLALFNLFKLTAEVI*RDYTHD Trigger: GTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGT...GAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR GCA 90 bp | ATTCTCATATCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTTATTCAGGTAGATCATaGCGTAAGCGAATTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ILISTEESEGDKDLSITCYSGRS*RKRIAF Trigger: GAAAGCAATTCGCTTACGGCATGATCTACCTGAATA...ACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGATATGAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR GCA 90 bp | ACACTGAAATATTTAACTAGGCTATCAGATTTCTCTTCTTGTTCCTTGGACACTTTGTTCCTTGGACACTaGTACTTCTTTAGGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: TLKYLTRLSDFSSCSLDTLFLGH*YFFRSR Trigger: TCGGCTCCTAAAGAAGTAGCAGTGTCCAAGGAACAA...AGTGTCCAAGGAACAAGAAGAGAAATCTGATAGCCTAGTTAAATATTTCAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CCA 90 bp | ATTCTCATATCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTCCTTGGAATAGAAGATaGAGACGATGTCATTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ILISTEESEGDKDLSITCPWNRR*RRCHSH Trigger: ATGAGAATGACATCGTCTCCATCTTCTATTCCAAGG...ACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGATATGAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | ATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTATTCTTATCTGGTCGTaGCATAACGAGGGAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: ISFPQIISVWPSSIFSSSILIWS*HNEGIW Trigger: CCAAATTCCCTCGTTATGCCACGACCAGATAAGAAT...AGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | TGGTCGAAGATGATATACAAGGTAAGGATCAATCACTACATCCACAAGAGGGAATCCTTCTTTCTGATGTaGTCGAAGATGATATACAAG | + |
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Preference number: 4 (lower is better) Translates to: WSKMIYKVRINHYIHKRESFFLM*SKMIYK Trigger: CTTGTATATCATCTTCGACCACATCAGAAAGAAGGA...TTCCCTCTTGTGGATGTAGTGATTGATCCTTACCTTGTATATCATCTTCGACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CCA 90 bp | TTACACAAAGAAAAACTAAGTGCTGGTCTCTGCTCTGCCATAAATAGCTTTGTTAGAAAAACTAAGTGCTaGTCTCTGCTCTGCCATAAA | + |
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Preference number: 4 (lower is better) Translates to: LHKEKLSAGLCSAINSFVRKTKC*SLLCHK Trigger: TTTATGGCAGAGCAGAGACCAGCACTTAGTTTTTCT...AACAAAGCTATTTATGGCAGAGCAGAGACCAGCACTTAGTTTTTCTTTGTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR GCA 90 bp | ATTCTCATATCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTTTAATGTCTTCTTCTTaGTTCACCTCCACTGTAATA | + |
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Preference number: 4 (lower is better) Translates to: ILISTEESEGDKDLSITCLMSSS*FTSTVI Trigger: TATTACAGTGGAGGTGAAGCAAGAAGAAGACATTAA...ACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGATATGAGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CCA 90 bp | CATTACACATTCATAAAGGAATATGATTCCTTCTTTCTGATGTGGTCGAAGATGCAAATCATCAGTGTTTaGCCCTCTTCAATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HYTFIKEYDSFFLMWSKMQIISV*PSSIFS Trigger: TGAAAAGATTGAAGAGGGCCAAACACTGATGATTTG...CATCTTCGACCACATCAGAAAGAAGGAATCATATTCCTTTATGAATGTGTAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS TCA 90 bp | ATGTCTTCTTCTTGCTTCACCTCCACTGTAATAGCAACAGGATGGTaGTCCAACATTACCTGTAGTGAACTGGTACCAGCCTGTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: MSSSCFTSTVIATGW*SNITCSELVPACAS Trigger: GGAGGCACAGGCTGGTACCAGTTCACTACAGGTAATGTTGGATCACCATCCTGTTGCTATTACAGTGGAGGTGAAGCAAGAAGAAGACAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CAA 90 bp | ATTCTCATATCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTTCCCCTGCAACTGACTaGGTGCTGCAGATCGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: ILISTEESEGDKDLSITCSPATD*VLQIVS Trigger: TGAGACGATCTGCAGCACCAAGTCAGTTGCAGGGGA...ACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGATATGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTGTCCCCTGCAACTGACTaGGTGCTGCAGATCGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: SFPQIISVWPSSIFSSSLSPATD*VLQIVS Trigger: TGAGACGATCTGCAGCACCAAGTCAGTTGCAGGGGA...CAAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAACCTGAGAAGAATGCGAGATAGCAGTACTTCCTCCTCCAAGCTGAAATTCTCTTCTTGTTCCTaGGACACTGCTACTTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: PGNLRRMRDSSTSSSKLKFSSCS*DTATSL Trigger: TAAAGAAGTAGCAGTGTCCAAGGAACAAGAAGAGAA...TTTCAGCTTGGAGGAGGAAGTACTGCTATCTCGCATTCTTCTCAGGTTGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | CCTGGCAACCTGAGAAGAATGCGAGATAGCAGTACTTCCTCCTCCAAGCTGAAACCTCTTCCAATGTCTTaGCCTTCCAAATTCTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: PGNLRRMRDSSTSSSKLKPLPMS*PSKFFN Trigger: ATTAAAGAATTTGGAAGGCAAAGACATTGGAAGAGG...TTTCAGCTTGGAGGAGGAAGTACTGCTATCTCGCATTCTTCTCAGGTTGCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | CATTACACATTCATAAAGGAATATGATTCCTTCTTTCTGATGTGGTCGAAGATGTCCCCTGCAACTGACTaGGTGCTGCAGATCGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HYTFIKEYDSFFLMWSKMSPATD*VLQIVS Trigger: TGAGACGATCTGCAGCACCAAGTCAGTTGCAGGGGA...CATCTTCGACCACATCAGAAAGAAGGAATCATATTCCTTTATGAATGTGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CAA 90 bp | GTTAGAGAAACATTTCCTGGCAACCTGAGAAGAATGCGAGATAGCAGTACTTCCATCAGATTTCTCTTCTaGTTCCTTGGACACTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: VRETFPGNLRRMRDSSTSIRFLF*FLGHCY Trigger: GTAGCAGTGTCCAAGGAACAAGAAGAGAAATCTGAT...GGAAGTACTGCTATCTCGCATTCTTCTCAGGTTGCCAGGAAATGTTTCTCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | TTACACAAAGAAAAACTAAGTGCTGGTCTCTGCTCTGCCATAAATAGCTTTGTTCCTCCTCATCCAAGTTaGCACTGTATGAGGTGGATC | + |
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Preference number: 5 (lower is better) Translates to: LHKEKLSAGLCSAINSFVPPHPS*HCMRWI Trigger: GATCCACCTCATACAGTGCAAACTTGGATGAGGAGG...AACAAAGCTATTTATGGCAGAGCAGAGACCAGCACTTAGTTTTTCTTTGTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CAA 90 bp | TATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCCCTCCTCATCCAAGTTaGCACTGTATGAGGTGGATC | + |
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Preference number: 5 (lower is better) Translates to: YFFSTNHQCLALFNLFKLPPHPS*HCMRWI Trigger: GATCCACCTCATACAGTGCAAACTTGGATGAGGAGG...GAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CAA 90 bp | TCAACAGAGGAAAGTGAAGGCGACAAGGATCTTTCCATAACATGTACTAATTCACATGCCGTAAGCGAATaGCTTTCAGCTTCTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: STEESEGDKDLSITCTNSHAVSE*LSASPL Trigger: AAGTGGAGAAGCTGAAAGCAATTCGCTTACGGCATG...TGAATTAGTACATGTTATGGAAAGATCCTTGTCGCCTTCACTTTCCTCTGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CAA 90 bp | CTGCCACTGCTGAAGTCATCTGGAGAGATTACACCCATGACTTCTATTTCTTTTACAAATCATCAGTGTTaGGCCCTCTTCAATCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LPLLKSSGEITPMTSISFTNHQC*ALFNLF Trigger: GAAAAGATTGAAGAGGGCCAAACACTGATGATTTGT...AAAAGAAATAGAAGTCATGGGTGTAATCTCTCCAGATGACTTCAGCAGTGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | AATTCTTTCTTCCAATTATTCACCAAGCTTCCAGGTGTGACAATTAGTGTCTTCGGGTCATGGCGTGGTTaGCAATTTTGGAAATCATTC | + |
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Preference number: 5 (lower is better) Translates to: NSFFQLFTKLPGVTISVFGSWRG*QFWKSF Trigger: GAATGATTTCCAAAATTGCAAACCACGCCATGACCC...GAAGACACTAATTGTCACACCTGGAAGCTTGGTGAATAATTGGAAGAAAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CAA 90 bp | TTACACAAAGAAAAACTAAGTGCTGGTCTCTGCTCTGCCATAAATAGCTTTGTTCTCCTCTTTCAACATTaGCAGGATCTGAGGATCATA | + |
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Preference number: 5 (lower is better) Translates to: LHKEKLSAGLCSAINSFVLLFQH*QDLRII Trigger: TATGATCCTCAGATCCTGCAAATGTTGAAAGAGGAG...AACAAAGCTATTTATGGCAGAGCAGAGACCAGCACTTAGTTTTTCTTTGTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297592.5 |
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| CDS-3UTR CAA 90 bp | TTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTATCAGATTTCTCTTCTaGTTCCTTGGACACTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: FLFHKSSVFGPLQSFQALIRFLF*FLGHCY Trigger: GTAGCAGTGTCCAAGGAACAAGAAGAGAAATCTGAT...AAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | ATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTACAAATCATCAGTGTTaGGCCCTCTTCAATCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ISFPQIISVWPSSIFSSSTNHQC*ALFNLF Trigger: GAAAAGATTGAAGAGGGCCAAACACTGATGATTTGT...AGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | ATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTCCTCTTCCAATGTCTTaGCCTTCCAAATTCTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: ISFPQIISVWPSSIFSSSPLPMS*PSKFFN Trigger: ATTAAAGAATTTGGAAGGCAAAGACATTGGAAGAGG...AGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463267.5 ENST00000518998.5 |
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| CDS-3UTR CAA 90 bp | CCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTGAATTTAGCGTGGTTTGCAATTTaGGAAATCATTCTGTCTATT | + |
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Preference number: 5 (lower is better) Translates to: PQIISVWPSSIFSSSLNLAWFAI*EIILSI Trigger: AATAGACAGAATGATTTCCAAAATTGCAAACCACGC...TAAATTCAAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTTTTCAACAGTAAATATCTaGATCCTTTCACTTCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFSTNHQCLALFNLFKLFSTVNI*ILSLPS Trigger: GCTAGGAAGTGAAAGGATCAAGATATTTACTGTTGA...AAAGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS-3UTR CAA 90 bp | ATTTCTTTTCCACAAATCATCAGTGTTTGGCCCTCTTCAATCTTTTCAAGCTCTGCAGATCATTCTGAATaGGAGTACCAGTTAGAATTA | + |
|
Preference number: 5 (lower is better) Translates to: ISFPQIISVWPSSIFSSSADHSE*EYQLEL Trigger: TAATTCTAACTGGTACTCCAATTCAGAATGATCTGC...AGAGCTTGAAAAGATTGAAGAGGGCCAAACACTGATGATTTGTGGAAAAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463267.5 |
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| CDS CAA 72 bp | TGTCTTGGTGAGGTCGACAACTGCCCCACAAAGACCTaGCTTACTGATCTGCCTTTGATAGATCTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CLGEVDNCPTKT*LTDLPLIDLFF Trigger: GAAGAAAAGATCTATCAAAGGCAGATCAGTAAGCAAGGTCTTTGTGGGGCAGTTGTCGACCTCACCAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336148.10 |
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| CDS CAA 90 bp | ATGTTCAGATGTCTTGGTGAGGTCGACAACTGCCCCACAAAGACCTaGCTTACTGATCTGCCTTTGATAGATCTTTTCTTCTATTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: MFRCLGEVDNCPTKT*LTDLPLIDLFFYCT Trigger: GGTACAATAGAAGAAAAGATCTATCAAAGGCAGATCAGTAAGCAAGGTCTTTGTGGGGCAGTTGTCGACCTCACCAAGACATCTGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336148.10 |
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| CDS CAA 90 bp | ACAATGAATTTTTCCAACGAATCACATATGACAAGAGAGGCTGACTaGGTCCGGAAGGTAAGTGAAGGGCACCCTGAGGAAATGTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TMNFSNESHMTREAD*VRKVSEGHPEEMFY Trigger: ATAGAACATTTCCTCAGGGTGCCCTTCACTTACCTTCCGGACCAAGTCAGCCTCTCTTGTCATATGTGATTCGTTGGAAAAATTCATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000519348.1 |
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| CDS GCA 72 bp | GTTAGTTACAGAGCAGTTCTAACGCAGTCTCATGCCTaGTACCTTCACCCTGCAAGTGTAGTATTAATATTT | + |
|
Preference number: 6 (lower is better) Translates to: VSYRAVLTQSHA*YLHPASVVLIF Trigger: AAATATTAATACTACACTTGCAGGGTGAAGGTAGCAGGCATGAGACTGCGTTAGAACTGCTCTGTAACTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518358.1 |
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| CDS CCA 72 bp | AGAAAGAGGTTTCAGGGAGTTAGATTTCTGGTGATGTaGACCAAGCTGACAATCTCTAGAGACAATGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: RKRFQGVRFLVM*TKLTISRDNEF Trigger: AAATTCATTGTCTCTAGAGATTGTCAGCTTGGTCCACATCACCAGAAATCTAACTCCCTGAAACCTCTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336148.10 ENST00000519348.1 |
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| CDS TCA 72 bp | ACTTCTTCTCCTGTACACTCACAGTCAAGCAGATCATaGGTAACACAATCTGAACTTTCATGTAATGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: TSSPVHSQSSRS*VTQSELSCNVN Trigger: GTTCACATTACATGAAAGTTCAGATTGTGTTACTCATGATCTGCTTGACTGTGAGTGTACAGGAGAAGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336148.10 |
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