RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAD51C (Homo sapiens)

Ensembl gene IDs: ENSG00000108384

Ensembl transcript IDs: ENST00000337432.9, ENST00000421782.3, ENST00000425173.5, ENST00000475762.5, ENST00000476741.2, ENST00000482007.5, ENST00000486827.1, ENST00000487525.5, ENST00000583539.5, ENST00000584617.5, ENST00000584804.1, ENST00000622327.4

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTTTCACGACCACAGTTCTCCTAACCATTCAGACAACTTGTAAGTaGAGTCGAGGAGCTCTTTCACGCTGTAAACATGGACGTGGGAGG +
Preference number: 1 (lower is better)
Translates to: VFTTTVLLTIQTTCK*SRGALSRCKHGRGR
Trigger: CCTCCCACGTCCATGTTTACAGCGTGAAAGAGCTCCTCGACTCCACTTACAAGTTGTCTGAATGGTTAGGAGAACTGTGGTCGTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR CCA 90 bp CAAGTGACCACCGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTaGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTTGGGTGTTT +
Preference number: 1 (lower is better)
Translates to: QVTTASLIFVCLRMQ*FPSAMLWNMRFWVF
Trigger: AAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCATCCTGAGACATACAAATATGAGGCTGGCGGTGGTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 90 bp CTGAGGTTTGATTTGAAACAGTACTGTGCATTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAACCTGCTTTGCTTTCGGTCCCAATG +
Preference number: 1 (lower is better)
Translates to: LRFDLKQYCAFLLAG*LVQCCQPALLSVPM
Trigger: CATTGGGACCGAAAGCAAAGCAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAATCAAACCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487525.5
3UTR TCA 90 bp AAAAAGAGCCCATCAAATCTTGGGGGACACAGTCTGCGCGCGGTATaGCTTAAACAGTTAAGGCTGGGTCCACGAGACTTATTCTTTAGA +
Preference number: 1 (lower is better)
Translates to: KKSPSNLGGHSLRAV*LKQLRLGPRDLFFR
Trigger: TCTAAAGAATAAGTCTCGTGGACCCAGCCTTAACTGTTTAAGTCATACCGCGCGCAGACTGTGTCCCCCAAGATTTGATGGGCTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR GCA 90 bp TCTAGTGCTGAACAGAAGGTGATTATGAAGCCCTGGGTATGCTCCTaGTCAAGAAGTTCCAGTGCTGTACACTTCTTGTGTGACTCAGAT +
Preference number: 1 (lower is better)
Translates to: SSAEQKVIMKPWVCS*SRSSSAVHFLCDSD
Trigger: ATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 90 bp GCATGTCCCCAACTTTCCCAGCTAATCTGTGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAG +
Preference number: 1 (lower is better)
Translates to: ACPQLSQLICDYLQG*SFAGLGHLITEYEE
Trigger: CTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATCACAGATTAGCTGGGAAAGTTGGGGACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR GCA 90 bp ATATCATCTAGTGCTGAACAGAAGGTGATTATGAAGCCCTGGGTATaGTCCTGCTCAAGAAGTTCCAGTGCTGTACACTTCTTGTGTGAC +
Preference number: 1 (lower is better)
Translates to: ISSSAEQKVIMKPWV*SCSRSSSAVHFLCD
Trigger: GTCACACAAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTAGATGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR CCA 90 bp CCAAGAATATCATCTAGTGCTGAACAGAAGGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACACTTCTTG +
Preference number: 1 (lower is better)
Translates to: PRISSSAEQKVIMKP*VCSCSRSSSAVHFL
Trigger: CAAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTAGATGATATTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR GCA 90 bp CGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTGGTTCCCATCTaGAATGCTCTGGAATATGAGGTTTTGGGTGTTTCAGTTAATTAC +
Preference number: 1 (lower is better)
Translates to: RQPHICMSQDAVVPI*NALEYEVLGVSVNY
Trigger: GTAATTAACTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCATCCTGAGACATACAAATATGAGGCTGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 90 bp AGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACC +
Preference number: 1 (lower is better)
Translates to: RPFNNRVRRDRSSRS*RNGKAIPSTITSRT
Trigger: GGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR TCA 90 bp GGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACACTTCTTGTGTaGCTCAGATGTACCAGCATATCTTGGTTTATTTGTGAGACATTC +
Preference number: 1 (lower is better)
Translates to: GMLLLKKFQCCTLLV*LRCTSISWFICETF
Trigger: GAATGTCTCACAAATAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 90 bp CATATACTGAATATAATAATCTACGTAAGCGGGTTGAGGGTTAAATaGGACAATCCTCAAAGCATTCAGCAGGCATTGCCAGAGGAAAAG +
Preference number: 1 (lower is better)
Translates to: HILNIIIYVSGLRVK*DNPQSIQQALPEEK
Trigger: CTTTTCCTCTGGCAATGCCTGCTGAATGCTTTGAGGATTGTCTCATTTAACCCTCAACCCGCTTACGTAGATTATTATATTCAGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 90 bp TCTGATTGGTTAAAATTACAGCTAATCTGTGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAG +
Preference number: 1 (lower is better)
Translates to: SDWLKLQLICDYLQG*SFAGLGHLITEYEE
Trigger: CTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATCACAGATTAGCTGTAATTTTAACCAATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR-3UTR TCA 90 bp GCACAACAAGTGACCACCGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTGGCGAGAGAACGAAGACTaGGGCGGCGCTGACGGCGGC +
Preference number: 2 (lower is better)
Translates to: AQQVTTASLIFVCLRMQWRENED*GGADGG
Trigger: GCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCG...CCACTGCATCCTGAGACATACAAATATGAGGCTGGCGGTGGTCACTTGTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR TCA 90 bp GCCACTCCTCCAAAACATTCTGGTATCTGCACATCTACTGCCAACTGCATACATAGACTGAGGCGGCGCTaGCGGCGGCCGGTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: ATPPKHSGICTSTANCIHRLRRR*RRPVCL
Trigger: GAGGCACACCGGCCGCCGTCAGCGCCGCCTCAGTCT...ATGTATGCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTTTGGAGGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp CGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAATGAACATGCAGAAGTAACACGAGAGAACGAAGACTaGGGCGGCGCTGACGGCGGC +
Preference number: 2 (lower is better)
Translates to: RFRVLKEPSVCNEHAEVTRENED*GGADGG
Trigger: GCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCG...TGTTACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp CGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAATGAACATGCAGAAGTAACATTCCTCTGGGTCTCGTaGCCGTTTCCGGGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: RFRVLKEPSVCNEHAEVTFLWVS*PFPGAQ
Trigger: TTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAA...TGTTACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR-3UTR GCA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 2 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFAARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR-3UTR GCA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAACAATGTTGCCAACCTaGTTTGCTTTCGGTCCCAAT +
Preference number: 2 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFATMLPT*FAFGPN
Trigger: ATTGGGACCGAAAGCAAAGCAGGTTGGCAACATTGT...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487525.5
3UTR-3UTR TCA 90 bp CGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCAAGGCCGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: RIVAACPQLSPNAGTSKADYLQG*SFAGLG
Trigger: GCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATC...GGCCTTGCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR-3UTR GCA 90 bp AAGGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTATTGGGGGACACAGTCTaGGCGCGGTATGACTTAAAC +
Preference number: 2 (lower is better)
Translates to: KVIMKPWVCSCSRSSSAVLGDTV*ARYDLN
Trigger: GTTTAAGTCATACCGCGCGCAGACTGTGTCCCCCAA...TACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR GCA 90 bp GCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATCCCTGGGTATGCTCCTaGTCAAGAAGTTCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: AGLGHLITEYEETGHLGHPWVCS*SRSSSA
Trigger: AGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGG...ATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR CCA 90 bp GGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACATGTCTCAGGATGCAGTaGTTCCCATCTGCAATGCTC +
Preference number: 2 (lower is better)
Translates to: GDYEALGMLLLKKFQCCTCLRMQ*FPSAML
Trigger: GAGCATTGCAGATGGGAACCACTGCATCCTGAGACA...TGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR GCA 90 bp TCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAATGAAGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 2 (lower is better)
Translates to: SGSRDRFRVLKEPSVCNEARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...TTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR-3UTR CCA 90 bp ATGAGACAATCCTCAAAGCATTCAGCAGGCATTGCCAGAGGAAAAGCAATTAGTGAATCTAACGGAGACTaGGCTGAAGGCCGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: MRQSSKHSAGIARGKAISESNGD*AEGRGE
Trigger: CTCGCCTCGGCCTTCAGCCCAGTCTCCGTTAGATTC...ACTAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCTTTGAGGATTGTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR CCA 90 bp ATCTCTAAATCCCTGAGGTTTGATTTGAAACAGTACTGTGCATTCCTTCTGGCTGAATCTAACGGAGACTaGGCTGAAGGCCGAGGCGAG +
Preference number: 2 (lower is better)
Translates to: ISKSLRFDLKQYCAFLLAESNGD*AEGRGE
Trigger: CTCGCCTCGGCCTTCAGCCCAGTCTCCGTTAGATTC...AGCCAGAAGGAATGCACAGTACTGTTTCAAATCAAACCTCAGGGATTTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp ATTCCTTCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCTGTACACTTCTTGTGTaGCTCAGATGTACCAGCATA +
Preference number: 2 (lower is better)
Translates to: IPSGWVTCTMLPTFAFGPCTLLV*LRCTSI
Trigger: TATGCTGGTACATCTGAGTCACACAAGAAGTGTACA...GGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCCGTAGGAGGATCACTTaGGGTCAGAAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPRRRIT*GQKFET
Trigger: GGTCTCAAACTTCTGACCTCAAGTGATCCTCCTACG...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622327.4
3UTR-3UTR GCA 90 bp GCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 2 (lower is better)
Translates to: AGLGHLITEYEETGHLGHARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...ATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR-3UTR CCA 90 bp AAGGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTATGCATTCCTTCTGGCTaGGTGACTTGTACAATGTTG +
Preference number: 2 (lower is better)
Translates to: KVIMKPWVCSCSRSSSAVCIPSG*VTCTML
Trigger: CAACATTGTACAAGTCACCCAGCCAGAAGGAATGCA...TACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR CCA 90 bp AAGGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACAGACAACTTGTAAGTaGAGTCGAGGAGCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: KVIMKPWVCSCSRSSSAVQTTCK*SRGALS
Trigger: TGAAAGAGCTCCTCGACTCCACTTACAAGTTGTCTG...TACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR CAA 90 bp CCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACACTTCTaGTGTGACTCAGATGTACCAGCATATCTTGGTTTATTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: PWVCSCSRSSSAVHF*CDSDVPAYLGLFVR
Trigger: TCTCACAAATAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR TCA 90 bp AATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTGCACATCAGTCTGCGCGCGGTATaGCTTAAACAGTTAAGGCTG +
Preference number: 2 (lower is better)
Translates to: NKNCFTCHSSKTFWYLHISLRAV*LKQLRL
Trigger: CAGCCTTAACTGTTTAAGTCATACCGCGCGCAGACT...GATGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR GCA 90 bp TCCAGTGCTGTACACTTCTTGTGTGACTCAGATGTACCAGCATATCTTGGTTTAATGAAGCCCTGGGTATaGTCCTGCTCAAGAAGTTCC +
Preference number: 2 (lower is better)
Translates to: SSAVHFLCDSDVPAYLGLMKPWV*SCSRSS
Trigger: GGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCAT...TAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR CCA 90 bp TCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAAAGGCTGATCATTTGCTaGGCTAGGCCATTTAATAAC +
Preference number: 2 (lower is better)
Translates to: SGWVTCTMLPTFAFGPNERLIIC*ARPFNN
Trigger: GTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT...TTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
3UTR-3UTR CCA 90 bp GCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATAGGCTGATCATTTGCTaGGCTAGGCCATTTAATAAC +
Preference number: 2 (lower is better)
Translates to: AGLGHLITEYEETGHLGHRLIIC*ARPFNN
Trigger: GTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT...ATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR-3UTR CCA 90 bp CTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCACAGACAACTTGTAAGTaGAGTCGAGGAGCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: LIICWARPFNNRVRRDRSQTTCK*SRGALS
Trigger: TGAAAGAGCTCCTCGACTCCACTTACAAGTTGTCTG...TGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp GCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATA +
Preference number: 2 (lower is better)
Translates to: AGLGHLITEYEETGHLGHRSSRS*RNGKAI
Trigger: TATTGCTTTTCCATTTCGTCATGACCTAGATGACCT...ATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR-3UTR TCA 90 bp ATCAATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTGCACTTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: INKNCFTCHSSKTFWYLHFLLAG*LVQCCQ
Trigger: TTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAA...GTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp GCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATACCTTCTGTTTGCAATaGACATGCAGAAGTAACAAC +
Preference number: 2 (lower is better)
Translates to: AGLGHLITEYEETGHLGHTFCLQ*TCRSNN
Trigger: GTTGTTACTTCTGCATGTTCATTGCAAACAGAAGGT...ATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR-3UTR GCA 90 bp GGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACAGCGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 2 (lower is better)
Translates to: GNLEEDKLVPVTLCSHDSARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...GCTGTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR-3UTR TCA 90 bp CGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAATGAACATGCAGAAGTAACAACCTTCTGTTTGCAATaGACATGCAGAAGTAACAAC +
Preference number: 2 (lower is better)
Translates to: RFRVLKEPSVCNEHAEVTTFCLQ*TCRSNN
Trigger: GTTGTTACTTCTGCATGTTCATTGCAAACAGAAGGT...TGTTACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR CAA 90 bp GGACTTTTAGAGTTGATGATGGAACCGGTTAAGACGTTTGGGGCTTaGAGTGTTCTGAAAGGAAATCTGGAAGAAGATAAACTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: GLLELMMEPVKTFGA*SVLKGNLEEDKLVP
Trigger: TGGCACAAGTTTATCTTCTTCCAGATTTCCTTTCAGAACACTCAAAGCCCCAAACGTCTTAACCGGTTCCATCATCAACTCTAAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487525.5
3UTR-3UTR TCA 90 bp AATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTGCACATCTGCTTTCGGTCCCAATaGAAGATTAGCCGTATTGTA +
Preference number: 2 (lower is better)
Translates to: NKNCFTCHSSKTFWYLHICFRSQ*KISRIV
Trigger: TACAATACGGCTAATCTTTCATTGGGACCGAAAGCA...GATGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp ATGCAGTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTTGGGTGTTTCAGAAAATCCTGCATTTCTaGAATTTAACCCTTACCCCT +
Preference number: 2 (lower is better)
Translates to: MQWFPSAMLWNMRFWVFQKILHF*NLTLTP
Trigger: AGGGGTAAGGGTTAAATTTCAGAAATGCAGGATTTT...CTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR GCA 90 bp GGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACAGCAAGGAACCTTCTGTTTaGAATGAACATGCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: GNLEEDKLVPVTLCSHDSKEPSV*NEHAEV
Trigger: TACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTT...GCTGTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR-3UTR CCA 90 bp CACTTCTTGTGTGACTCAGATGTACCAGCATATCTTGGTTTATTTGTGAGACATCCATCTGCAATGCTCTaGAATATGAGGTTTTGGGTG +
Preference number: 2 (lower is better)
Translates to: HFLCDSDVPAYLGLFVRHPSAML*NMRFWV
Trigger: CACCCAAAACCTCATATTCCAGAGCATTGCAGATGG...ATGTCTCACAAATAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR CAA 90 bp CAGGATGCAGTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTaGGGTGTTTCAGTTAATTACGTAAGAGAATATTCTTTCTATGCT +
Preference number: 2 (lower is better)
Translates to: QDAVVPICNALEYEV*GVSVNYVREYSFYA
Trigger: AGCATAGAAAGAATATTCTCTTACGTAATTAACTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR TCA 90 bp ATCTCTAAATCCCTGAGGTTTGATTTGAAACAGTACTGTGCATTCCTTCTGGCTTTAGACAACCAATTCTaGCTCCAGTATTTCCTAACC +
Preference number: 2 (lower is better)
Translates to: ISKSLRFDLKQYCAFLLALDNQF*LQYFLT
Trigger: GGTTAGGAAATACTGGAGTCAGAATTGGTTGTCTAA...AGCCAGAAGGAATGCACAGTACTGTTTCAAATCAAACCTCAGGGATTTAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp ACACAAAATCCTGCATTTCTGAAATTTAACCCTTACCCCTTGGATCTTGGAACAAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATA +
Preference number: 2 (lower is better)
Translates to: TQNPAFLKFNPYPLDLGTRSSRS*RNGKAI
Trigger: TATTGCTTTTCCATTTCGTCATGACCTAGATGACCT...TGTTCCAAGATCCAAGGGGTAAGGGTTAAATTTCAGAAATGCAGGATTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR TCA 90 bp AGACATTCTCTTCTGATAATTTGCAGAGTTTCTAAGGCTTCTGCTTTAGATATCTTAGACAACCAATTCTaGCTCCAGTATTTCCTAACC +
Preference number: 2 (lower is better)
Translates to: RHSLLIICRVSKASALDILDNQF*LQYFLT
Trigger: GGTTAGGAAATACTGGAGTCAGAATTGGTTGTCTAA...GATATCTAAAGCAGAAGCCTTAGAAACTCTGCAAATTATCAGAAGAGAATGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR TCA 90 bp AGACATTCTCTTCTGATAATTTGCAGAGTTTCTAAGGCTTCTGCTTTAGATATCTCTTTAGAGGCGAATTaGAACCTCTGTATTTTCCAT +
Preference number: 2 (lower is better)
Translates to: RHSLLIICRVSKASALDISLEAN*NLCIFH
Trigger: ATGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGA...GATATCTAAAGCAGAAGCCTTAGAAACTCTGCAAATTATCAGAAGAGAATGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 72 bp CCATCAAATCTTGGGGGACACAGTCTGCGCGCGGTATaGCTTAAACAGTTAAGGCTGGGTCCACGAGACTTA +
Preference number: 3 (lower is better)
Translates to: PSNLGGHSLRAV*LKQLRLGPRDL
Trigger: TAAGTCTCGTGGACCCAGCCTTAACTGTTTAAGTCATACCGCGCGCAGACTGTGTCCCCCAAGATTTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR GCA 72 bp ATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTaGTCAAGGAACCTTCTGTTTGCAATGAACATGCAG +
Preference number: 3 (lower is better)
Translates to: IILPLGLVTVSG*SRNLLFAMNMQ
Trigger: CTGCATGTTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR-3UTR CAA 90 bp GCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATCGGTGTTCCTCTCCCTaGTGTTTTTCTGCTATAAGC +
Preference number: 3 (lower is better)
Translates to: AGLGHLITEYEETGHLGHRCSSP*CFSAIS
Trigger: GCTTATAGCAGAAAAACACAAGGGAGAGGAACACCG...ATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
3UTR-3UTR CAA 90 bp TATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTAAGACGTTTGGGGCTTaGAGTGTTCTGAAAGGAAAT +
Preference number: 3 (lower is better)
Translates to: YNSSSGSRDRFRVLKEPSKTFGA*SVLKGN
Trigger: ATTTCCTTTCAGAACACTCAAAGCCCCAAACGTCTT...AGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
3UTR-3UTR CAA 90 bp ATTCCTTCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCCTTACCCCTTGGATCTaGGAACAGCAAAAATTAGAC +
Preference number: 3 (lower is better)
Translates to: IPSGWVTCTMLPTFAFGPLTPWI*EQQKLD
Trigger: GTCTAATTTTTGCTGTTCCAAGATCCAAGGGGTAAG...GGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR CAA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCCTTGAGGTCAGAAGTTaGAGACCAGTCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPLEVRS*RPVWPT
Trigger: TGTTGGCCAGACTGGTCTCAAACTTCTGACCTCAAG...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622327.4
3UTR GCA 72 bp GAACAGAAGGTGATTATGAAGCCCTGGGTATGCTCCTaGTCAAGAAGTTCCAGTGCTGTACACTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: EQKVIMKPWVCS*SRSSSAVHFLC
Trigger: ACACAAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTTCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR GCA 72 bp CAAAGCTTTTCGGTGTTCCTCTCCCTTGTGTTTTTCTaGTATAAGCTGAAGGTGCTGAATGCAGGCAGTAGC +
Preference number: 3 (lower is better)
Translates to: QSFSVFLSLVFF*YKLKVLNAGSS
Trigger: GCTACTGCCTGCATTCAGCACCTTCAGCTTATAGCAGAAAAACACAAGGGAGAGGAACACCGAAAAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
3UTR CCA 72 bp ACCGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTaGTTCCCATCTGCAATGCTCTGGAATATGAGGTTT +
Preference number: 3 (lower is better)
Translates to: TASLIFVCLRMQ*FPSAMLWNMRF
Trigger: AAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCATCCTGAGACATACAAATATGAGGCTGGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR CCA 72 bp TCATCTAGTGCTGAACAGAAGGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTA +
Preference number: 3 (lower is better)
Translates to: SSSAEQKVIMKP*VCSCSRSSSAV
Trigger: TACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR CAA 90 bp ATGCAGTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTTGGGTGTTTCAGAGCATTCAGCAGGCATaGCCAGAGGAAAAGCAATTA +
Preference number: 3 (lower is better)
Translates to: MQWFPSAMLWNMRFWVFQSIQQA*PEEKQL
Trigger: TAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCT...CTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 72 bp TACAATGTTGCCAACCTGCTTTGCTTTCGGTCCCAATaGAAGATTAGCCGTATTGTAGCAGCATGTCCCCAA +
Preference number: 3 (lower is better)
Translates to: YNVANLLCFRSQ*KISRIVAACPQ
Trigger: TTGGGGACATGCTGCTACAATACGGCTAATCTTTCATTGGGACCGAAAGCAAAGCAGGTTGGCAACATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
3UTR TCA 72 bp GATTTGAAACAGTACTGTGCATTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAACCTGCTTTGCTTTCG +
Preference number: 3 (lower is better)
Translates to: DLKQYCAFLLAG*LVQCCQPALLS
Trigger: CGAAAGCAAAGCAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487525.5
3UTR TCA 72 bp GATTTGAAACAGTACTGTGCATTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAACCTTTGCTTTCGGTC +
Preference number: 3 (lower is better)
Translates to: DLKQYCAFLLAG*LVQCCQPLLSV
Trigger: GACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
3UTR CCA 72 bp ACCACAGTTCTCCTAACCATTCAGACAACTTGTAAGTaGAGTCGAGGAGCTCTTTCACGCTGTAAACATGGA +
Preference number: 3 (lower is better)
Translates to: TTVLLTIQTTCK*SRGALSRCKHG
Trigger: TCCATGTTTACAGCGTGAAAGAGCTCCTCGACTCCACTTACAAGTTGTCTGAATGGTTAGGAGAACTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR CCA 72 bp ACACAGGGGAGTCCAGAGATTAGTAACTCAAAAGTTTaGTTAGATTTGGAGCTGGGCACAGGTGTTCACACT +
Preference number: 3 (lower is better)
Translates to: TQGSPEISNSKV*LDLELGTGVHT
Trigger: AGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGAGTTACTAATCTCTGGACTCCCCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622327.4
3UTR-3UTR CAA 90 bp GGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACAGCAGCATTCAGCAGGCATaGCCAGAGGAAAAGCAATTA +
Preference number: 3 (lower is better)
Translates to: GNLEEDKLVPVTLCSHDSSIQQA*PEEKQL
Trigger: TAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCT...GCTGTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR-3UTR CAA 90 bp ATGCAGTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTTGGGTGTTTCAGCTTACCCCTTGGATCTaGGAACAGCAAAAATTAGAC +
Preference number: 3 (lower is better)
Translates to: MQWFPSAMLWNMRFWVFQLTPWI*EQQKLD
Trigger: GTCTAATTTTTGCTGTTCCAAGATCCAAGGGGTAAG...CTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 72 bp CCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAATaGACATGCAGAAGTAACAACAGTATCTCTAAATCC +
Preference number: 3 (lower is better)
Translates to: PFPGAQGTFCLQ*TCRSNNSISKS
Trigger: GGATTTAGAGATACTGTTGTTACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
3UTR GCA 72 bp GCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTaGACATCTACTGCCAACTGCATACATAATTGTGTT +
Preference number: 3 (lower is better)
Translates to: ASPATPPKHSGI*TSTANCIHNCV
Trigger: AACACAATTATGTATGCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR TCA 72 bp GGAAAAGCAATACCATCCACTATCACTAGTCGAACCTaGTTTCAAACGTTCACAGCTGGAAGGGAATTTCAC +
Preference number: 3 (lower is better)
Translates to: GKAIPSTITSRT*FQTFTAGREFH
Trigger: GTGAAATTCCCTTCCAGCTGTGAACGTTTGAAATCAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
3UTR TCA 72 bp CAACTTTCCCAGCTAATCTGTGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGCCATTTAATAACCGAG +
Preference number: 3 (lower is better)
Translates to: QLSQLICDYLQG*SFAGLGHLITE
Trigger: CTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATCACAGATTAGCTGGGAAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
3UTR GCA 72 bp CATATTTGTATGTCTCAGGATGCAGTGGTTCCCATCTaGAATGCTCTGGAATATGAGGTTTTGGGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: HICMSQDAVVPI*NALEYEVLGVS
Trigger: TGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCATCCTGAGACATACAAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 72 bp CTGCTCAAGAAGTTCCAGTGCTGTACACTTCTTGTGTaGCTCAGATGTACCAGCATATCTTGGTTTATTTGT +
Preference number: 3 (lower is better)
Translates to: LLKKFQCCTLLV*LRCTSISWFIC
Trigger: ACAAATAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCTTGAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR-3UTR CAA 90 bp AGAAGTTCCAGTGCTGTACACTTCTTGTGTGACTCAGATGTACCAGCATATCTTTTCTTTAGAGGCGAATaGAAACCTCTGTATTTTCCA +
Preference number: 3 (lower is better)
Translates to: RSSSAVHFLCDSDVPAYLFFRGE*KPLYFP
Trigger: TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAA...AAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR TCA 72 bp TATTCTGGAAGACATATGTTCCAAACAATCTCTAGATaGGATAACAGCTCCAAAGTCCTCCCTTTAACATTA +
Preference number: 3 (lower is better)
Translates to: YSGRHMFQTISR*DNSSKVLPLTL
Trigger: TAATGTTAAAGGGAGGACTTTGGAGCTGTTATCTCATCTAGAGATTGTTTGGAACATATGTCTTCCAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337432.9
CDS-3UTR GCA 90 bp GAAGGCCGAGGCGAGAGAACGAAGACTGAGGCGGCGCTGACGGCGGCCGGTGTGCGGTGTGCCTCAGCTTaGCATCAGGAGTCGTTACCT +
Preference number: 4 (lower is better)
Translates to: EGRGERTKTEAALTAAGVRCASA*HQESLP
Trigger: AGGTAACGACTCCTGATGGCAAGCTGAGGCACACCG...CACACCGGCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCGCCTCGGCCTTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp GAAGGCCGAGGCGAGAGAACGAAGACTGAGGCGGCGCTGACGGCGGCCGGTGTGGCAGTGGTTCCCATCTaGAATGCTCTGGAATATGAG +
Preference number: 4 (lower is better)
Translates to: EGRGERTKTEAALTAAGVAVVPI*NALEYE
Trigger: CTCATATTCCAGAGCATTGCAGATGGGAACCACTGC...CACACCGGCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCGCCTCGGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp GGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACAAGACTGAGGCGGCGCTaGCGGCGGCCGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GDYEALGMLLLKKFQCCTRLRRR*RRPVCL
Trigger: GAGGCACACCGGCCGCCGTCAGCGCCGCCTCAGTCT...TGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp AAGGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACGAGAGAACGAAGACTaGGGCGGCGCTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: KVIMKPWVCSCSRSSSAVRENED*GGADGG
Trigger: GCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCG...TACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp AAGTGGAGTCGAGGAGCTCTTTCACGCTGTAAACATGGACGTGGGAGGAAGCAGGAATCTAACGGAGACTaGGCTGAAGGCCGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: KWSRGALSRCKHGRGRKQESNGD*AEGRGE
Trigger: CTCGCCTCGGCCTTCAGCCCAGTCTCCGTTAGATTC...CTGCTTCCTCCCACGTCCATGTTTACAGCGTGAAAGAGCTCCTCGACTCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp TCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCCCCTGGGTATGCTCCTaGTCAAGAAGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSSGSRDRFRVLKEPSVCPWVCS*SRSSSA
Trigger: AGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGG...GCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCATTGGGGGACACAGTCTaGGCGCGGTATGACTTAAAC +
Preference number: 4 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFALGDTV*ARYDLN
Trigger: GTTTAAGTCATACCGCGCGCAGACTGTGTCCCCCAA...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CCA 90 bp TTTCTGGGTTATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGCTTCACCCGCACCGCTaGAGACAGCGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: FLGYNSSSGSRDRFRVLKLHPHR*RQRETH
Trigger: GTGAGTTTCCCGCTGTCTCCAGCGGTGCGGGTGAAG...CTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTATAACCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp AAGTGGAGTCGAGGAGCTCTTTCACGCTGTAAACATGGACGTGGGAGGAAGCAGTTGGGGGACACAGTCTaGGCGCGGTATGACTTAAAC +
Preference number: 4 (lower is better)
Translates to: KWSRGALSRCKHGRGRKQLGDTV*ARYDLN
Trigger: GTTTAAGTCATACCGCGCGCAGACTGTGTCCCCCAA...CTGCTTCCTCCCACGTCCATGTTTACAGCGTGAAAGAGCTCCTCGACTCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp CAACAAGTGACCACCGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTGGTTCAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: QQVTTASLIFVCLRMQWFSSSAV*NPADTS
Trigger: GCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACT...GAACCACTGCATCCTGAGACATACAAATATGAGGCTGGCGGTGGTCACTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFADYLQG*SFAGLG
Trigger: GCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATC...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp ATTAGCCGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCTTCCTCTGGGTCTCGTaGCCGTTTCCGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: ISRIVAACPQLSPNAGTSFLWVS*PFPGAQ
Trigger: TTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAA...GCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp CTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATTCCTCTGGGTCTCGTaGCCGTTTCCGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LIICWARPFNNRVRRDRSFLWVS*PFPGAQ
Trigger: TTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAA...TGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp CAACAAGTGACCACCGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTGGTTCGATGTGCACAACAAGTaGCCACCGCCAGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: QQVTTASLIFVCLRMQWFDVHNK*PPPASY
Trigger: ATATGAGGCTGGCGGTGGTCACTTGTTGTGCACATC...GAACCACTGCATCCTGAGACATACAAATATGAGGCTGGCGGTGGTCACTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp AGACATTCTCTTCTGATAATTTGCAGAGTTTCTAAGGCTTCTGCTTTAGATATCAGACTGAGGCGGCGCTaGCGGCGGCCGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RHSLLIICRVSKASALDIRLRRR*RRPVCL
Trigger: GAGGCACACCGGCCGCCGTCAGCGCCGCCTCAGTCT...GATATCTAAAGCAGAAGCCTTAGAAACTCTGCAAATTATCAGAAGAGAATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp CTGGGTTATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAAGTGACCGTTTCCGGGTaGTCAAGGAACCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LGYNSSSGSRDRFRVLKEVTVSG*SRNLLF
Trigger: AAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCAC...TTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTATAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CCA 90 bp GGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACAGCCTTCACCCGCACCGCTaGAGACAGCGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: GNLEEDKLVPVTLCSHDSLHPHR*RQRETH
Trigger: GTGAGTTTCCCGCTGTCTCCAGCGGTGCGGGTGAAG...GCTGTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR CCA 90 bp AGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCCTTCACCCGCACCGCTaGAGACAGCGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: SIKSCPQICLLPTEVDRSLHPHR*RQRETH
Trigger: GTGAGTTTCCCGCTGTCTCCAGCGGTGCGGGTGAAG...GCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: FAGLGHLITEYEETGHLGSSSAV*NPADTS
Trigger: GCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACT...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp CTGGGTTATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAATTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LGYNSSSGSRDRFRVLKEFLLAG*LVQCCQ
Trigger: TTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAA...TTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTATAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp AAGGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTAGATGTGCACAACAAGTaGCCACCGCCAGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: KVIMKPWVCSCSRSSSAVDVHNK*PPPASY
Trigger: ATATGAGGCTGGCGGTGGTCACTTGTTGTGCACATC...TACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp GGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACACTCACCAAATCCCGCTaGATTTCAAAGCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: GDYEALGMLLLKKFQCCTLTKSR*ISKRNV
Trigger: GACGTTCCGCTTTGAAATGCAGCGGGATTTGGTGAG...TGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp GCACAACAAGTGACCACCGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTGGTGTCATAGAGAGATGTaGACAACAAGTGACCACCGC +
Preference number: 4 (lower is better)
Translates to: AQQVTTASLIFVCLRMQWCHREM*TTSDHR
Trigger: GCGGTGGTCACTTGTTGTGCACATCTCTCTATGACA...CCACTGCATCCTGAGACATACAAATATGAGGCTGGCGGTGGTCACTTGTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp CTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGACGAAAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: LGHLITEYEETGHLGHDESSSAV*NPADTS
Trigger: GCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACT...TTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR CCA 90 bp TGTACAATGTTGCCAACCTGCTTTGCTTTCGGTCCCAATGAAAGATTAGCCGTAAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: CTMLPTCFAFGPNERLAVSSSAV*NPADTS
Trigger: GCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACT...TACGGCTAATCTTTCATTGGGACCGAAAGCAAAGCAGGTTGGCAACATTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR TCA 90 bp AAGTGGAGTCGAGGAGCTCTTTCACGCTGTAAACATGGACGTGGGAGGAAGCAGTGTACACTTCTTGTGTaGCTCAGATGTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: KWSRGALSRCKHGRGRKQCTLLV*LRCTSI
Trigger: TATGCTGGTACATCTGAGTCACACAAGAAGTGTACA...CTGCTTCCTCCCACGTCCATGTTTACAGCGTGAAAGAGCTCCTCGACTCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp ATTCCTTCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCTTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: IPSGWVTCTMLPTFAFGPFLLAG*LVQCCQ
Trigger: TTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAA...GGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR TCA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAACCTTCTGTTTGCAATaGACATGCAGAAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFATFCLQ*TCRSNN
Trigger: GTTGTTACTTCTGCATGTTCATTGCAAACAGAAGGT...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp CAAGATATCAGTTCTCTCATCCATATACTGAATATAATAATCTACGTAAGCGGGCGAGAGAACGAAGACTaGGGCGGCGCTGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: QDISSLIHILNIIIYVSGRENED*GGADGG
Trigger: GCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCG...CCCGCTTACGTAGATTATTATATTCAGTATATGGATGAGAGAACTGATATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp AAGTGGAGTCGAGGAGCTCTTTCACGCTGTAAACATGGACGTGGGAGGAAGCAGCAATGCTCTGGAATATaGGGTTTTGGGTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: KWSRGALSRCKHGRGRKQQCSGI*GFGCFS
Trigger: ACTGAAACACCCAAAACCTCATATTCCAGAGCATTG...CTGCTTCCTCCCACGTCCATGTTTACAGCGTGAAAGAGCTCCTCGACTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp TCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAACTCACCAAATCCCGCTaGATTTCAAAGCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: SGWVTCTMLPTFAFGPNELTKSR*ISKRNV
Trigger: GACGTTCCGCTTTGAAATGCAGCGGGATTTGGTGAG...TTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR GCA 90 bp GCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATCTCACCAAATCCCGCTaGATTTCAAAGCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: AGLGHLITEYEETGHLGHLTKSR*ISKRNV
Trigger: GACGTTCCGCTTTGAAATGCAGCGGGATTTGGTGAG...ATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp GGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACATGTCATAGAGAGATGTaGACAACAAGTGACCACCGC +
Preference number: 4 (lower is better)
Translates to: GDYEALGMLLLKKFQCCTCHREM*TTSDHR
Trigger: GCGGTGGTCACTTGTTGTGCACATCTCTCTATGACA...TGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp TTTCCCCTAATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTTGTTGTCACTTCACCCGCACCGCTaGAGACAGCGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: FPLMQEQARPDFYQSLLSLHPHR*RQRETH
Trigger: GTGAGTTTCCCGCTGTCTCCAGCGGTGCGGGTGAAG...TGACAACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCATTAGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR CCA 90 bp CGTAAGAGAATATTCTTTCTATGCTTCCTCAAGATTCCGGGGATTCTACTCTCTCTTCACCCGCACCGCTaGAGACAGCGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: RKRIFFLCFLKIPGILLSLHPHR*RQRETH
Trigger: GTGAGTTTCCCGCTGTCTCCAGCGGTGCGGGTGAAG...AGAGAGTAGAATCCCCGGAATCTTGAGGAAGCATAGAAAGAATATTCTCTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp ATTCCTTCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: IPSGWVTCTMLPTFAFGPVIMKP*VCSCSR
Trigger: TCTTGAGCAGGAGCATACCCAGGGCTTCATAATCAC...GGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR CCA 90 bp CTGGGTTATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAATGCATTCCTTCTGGCTaGGTGACTTGTACAATGTTG +
Preference number: 4 (lower is better)
Translates to: LGYNSSSGSRDRFRVLKECIPSG*VTCTML
Trigger: CAACATTGTACAAGTCACCCAGCCAGAAGGAATGCA...TTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTATAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CCA 90 bp TGCAGAGTTTCTAAGGCTTCTGCTTTAGATATCCCAACTTTGCATGACTTTGGGGAGCCCATCAAATCTTaGGGGACACAGTCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: CRVSKASALDIPTLHDFGEPIKS*GTQSAR
Trigger: GCGCGCAGACTGTGTCCCCCAAGATTTGATGGGCTC...CCCAAAGTCATGCAAAGTTGGGATATCTAAAGCAGAAGCCTTAGAAACTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486827.1
CDS-3UTR CCA 90 bp TCCAGTGCTGTACACTTCTTGTGTGACTCAGATGTACCAGCATATCTTGGTTTAGAATCTAACGGAGACTaGGCTGAAGGCCGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: SSAVHFLCDSDVPAYLGLESNGD*AEGRGE
Trigger: CTCGCCTCGGCCTTCAGCCCAGTCTCCGTTAGATTC...TAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp ATTAGCCGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCTTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ISRIVAACPQLSPNAGTSFLLAG*LVQCCQ
Trigger: TTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAA...GCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCATCTTTAGAGGCGAATTaGAACCTCTGTATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFASLEAN*NLCIFH
Trigger: ATGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGA...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAAAGGAACCTTCTGTTTaGAATGAACATGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFAKEPSV*NEHAEV
Trigger: TACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTT...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp ACAGTACTGTGCATTCCTTCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGTGACCGTTTCCGGGTaGTCAAGGAACCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: TVLCIPSGWVTCTMLPTFVTVSG*SRNLLF
Trigger: AAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCAC...AAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR GCA 90 bp AGAAGTTCCAGTGCTGTACACTTCTTGTGTGACTCAGATGTACCAGCATATCTTCGGTGTGCCTCAGCTTaGCATCAGGAGTCGTTACCT +
Preference number: 4 (lower is better)
Translates to: RSSSAVHFLCDSDVPAYLRCASA*HQESLP
Trigger: AGGTAACGACTCCTGATGGCAAGCTGAGGCACACCG...AAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp GAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: EMEKQYHPLSLVEPLSVLSSSAV*NPADTS
Trigger: GCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACT...CAGAACACTCAAAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CCA 90 bp GACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: DNVLSIKSCPQICLLPTESSSAV*NPADTS
Trigger: GCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACT...TTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp ATGCAGTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTTGGGTGTTTCAGTGTCTCAGGATGCAGTaGTTCCCATCTGCAATGCTC +
Preference number: 4 (lower is better)
Translates to: MQWFPSAMLWNMRFWVFQCLRMQ*FPSAML
Trigger: GAGCATTGCAGATGGGAACCACTGCATCCTGAGACA...CTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp CTGGGTTATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAAAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: LGYNSSSGSRDRFRVLKERSSRS*RNGKAI
Trigger: TATTGCTTTTCCATTTCGTCATGACCTAGATGACCT...TTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTATAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FAGLGHLITEYEETGHLGDYLQG*SFAGLG
Trigger: GCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATC...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp CGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCAAGGCCGGAACAAGCAAGGCCTaGTTTCTATCAATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: RIVAACPQLSPNAGTSKAGTSKA*FLSIFV
Trigger: AACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCC...GGCCTTGCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp GGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACATATCCCAACTTTGCATaGCTTTGGGCAAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: GDYEALGMLLLKKFQCCTYPNFA*LWASYF
Trigger: GAAGTAACTTGCCCAAAGTCATGCAAAGTTGGGATA...TGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486827.1
CDS-3UTR GCA 90 bp ATCAATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTGCACCCCTGGGTATGCTCCTaGTCAAGAAGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: INKNCFTCHSSKTFWYLHPWVCS*SRSSSA
Trigger: AGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGG...GTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp AGAAGTTCCAGTGCTGTACACTTCTTGTGTGACTCAGATGTACCAGCATATCTTCCCTGGGTATGCTCCTaGTCAAGAAGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSSSAVHFLCDSDVPAYLPWVCS*SRSSSA
Trigger: AGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGG...AAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGACCCTGGGTATGCTCCTaGTCAAGAAGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRPWVCS*SRSSSA
Trigger: AGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGG...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp CTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGACGAAATGAAGCCCTGGGTATaGTCCTGCTCAAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGHLITEYEETGHLGHDEMKPWV*SCSRSS
Trigger: GGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCAT...TTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp AGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCATGAAGCCCTGGGTATaGTCCTGCTCAAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SIKSCPQICLLPTEVDRSMKPWV*SCSRSS
Trigger: GGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCAT...GCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp GCAAGGCTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 4 (lower is better)
Translates to: ARLIICWARPFNNRVRRDARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...GTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR GCA 90 bp ATTAGCCGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 4 (lower is better)
Translates to: ISRIVAACPQLSPNAGTSARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...GCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR CCA 90 bp AGGCTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGACTGTGCATTCCTTCTaGCTGGGTGACTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: RLIICWARPFNNRVRRDRTVHSF*LGDLYN
Trigger: ATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGT...CCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CCA 90 bp AGGCTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGCCATCTGCAATGCTCTaGAATATGAGGTTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: RLIICWARPFNNRVRRDRPSAML*NMRFWV
Trigger: CACCCAAAACCTCATATTCCAGAGCATTGCAGATGG...CCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CCA 90 bp AAGGTGATTATGAAGCCCTGGGTATGCTCCTGCTCAAGAAGTTCCAGTGCTGTACCATCTGCAATGCTCTaGAATATGAGGTTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: KVIMKPWVCSCSRSSSAVPSAML*NMRFWV
Trigger: CACCCAAAACCTCATATTCCAGAGCATTGCAGATGG...TACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACATTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTFLLAG*LVQCCQ
Trigger: TTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAA...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp TCAATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTGCACAAGTCTGCGCGCGGTATaGCTTAAACAGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SIKTASPATPPKHSGICTSLRAV*LKQLRL
Trigger: CAGCCTTAACTGTTTAAGTCATACCGCGCGCAGACT...TGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp CTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTCCACTCACCAAATCCCGCTaGATTTCAAAGCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: LGPRDLFFRGELKPLYFPLTKSR*ISKRNV
Trigger: GACGTTCCGCTTTGAAATGCAGCGGGATTTGGTGAG...TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGACTCACCAAATCCCGCTaGATTTCAAAGCGGAACGTC +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRLTKSR*ISKRNV
Trigger: GACGTTCCGCTTTGAAATGCAGCGGGATTTGGTGAG...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp CTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTCCAATGAAGCCCTGGGTATaGTCCTGCTCAAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGPRDLFFRGELKPLYFPMKPWV*SCSRSS
Trigger: GGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCAT...TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp TCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAATGTATCAATAAAAACTaGTTCACCTGCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGWVTCTMLPTFAFGPNECINKN*FTCHSS
Trigger: GGAGGAGTGGCAGGTGAAGCAGTTTTTATTGATACA...TTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR GCA 90 bp ATGCAGTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTTGGGTGTTTCAGTTTGAAACAGTACTGTaGATTCCTTCTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: MQWFPSAMLWNMRFWVFQFETVL*IPSGWV
Trigger: CACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAA...CTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp CTGGGTTATAATTCTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAAAAGGAACCTTCTGTTTaGAATGAACATGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LGYNSSSGSRDRFRVLKEKEPSV*NEHAEV
Trigger: TACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTT...TTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAGAATTATAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp AGGCTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTGTGACCGTTTCCGGGTaGTCAAGGAACCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RLGPRDLFFRGELKPLYFVTVSG*SRNLLF
Trigger: AAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCAC...AAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CCA 90 bp CCACTATCACTAGTCGAACCTGATTTCAAACGTTCACAGCTGGAAGGGAATTTCGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PLSLVEPDFKRSQLEGNFVIMKP*VCSCSR
Trigger: TCTTGAGCAGGAGCATACCCAGGGCTTCATAATCAC...GAAATTCCCTTCCAGCTGTGAACGTTTGAAATCAGGTTCGACTAGTGATAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR CCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTVIMKP*VCSCSR
Trigger: TCTTGAGCAGGAGCATACCCAGGGCTTCATAATCAC...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPVIMKP*VCSCSR
Trigger: TCTTGAGCAGGAGCATACCCAGGGCTTCATAATCAC...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR CCA 90 bp ATTAGCCGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCAGGCTGATCATTTGCTaGGCTAGGCCATTTAATAAC +
Preference number: 4 (lower is better)
Translates to: ISRIVAACPQLSPNAGTSRLIIC*ARPFNN
Trigger: GTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT...GCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR CCA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTTGCATTCCTTCTGGCTaGGTGACTTGTACAATGTTG +
Preference number: 4 (lower is better)
Translates to: FAGLGHLITEYEETGHLGCIPSG*VTCTML
Trigger: CAACATTGTACAAGTCACCCAGCCAGAAGGAATGCA...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CCA 90 bp AGGTCTACCACTCTATCAACCATAAAACTTCCCTCTGTATCAATAAAAACTGCTGAGCCCATCAAATCTTaGGGGACACAGTCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: RSTTLSTIKLPSVSIKTAEPIKS*GTQSAR
Trigger: GCGCGCAGACTGTGTCCCCCAAGATTTGATGGGCTC...AGCAGTTTTTATTGATACAGAGGGAAGTTTTATGGTTGATAGAGTGGTAGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CCA 90 bp GTGCTGAATGCAGGCAGTAGCAAGGTCTACCACTCTATCAACCATAAAACTTCCCAGACAACTTGTAAGTaGAGTCGAGGAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VLNAGSSKVYHSINHKTSQTTCK*SRGALS
Trigger: TGAAAGAGCTCCTCGACTCCACTTACAAGTTGTCTG...GGAAGTTTTATGGTTGATAGAGTGGTAGACCTTGCTACTGCCTGCATTCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CCA 90 bp ATGCAGTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTTGGGTGTTTCAGCAGACAACTTGTAAGTaGAGTCGAGGAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: MQWFPSAMLWNMRFWVFQQTTCK*SRGALS
Trigger: TGAAAGAGCTCCTCGACTCCACTTACAAGTTGTCTG...CTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp ACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAAAGATTAGCCGTAGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: TCTMLPTFAFGPNERLAVDYLQG*SFAGLG
Trigger: GCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATC...TACGGCTAATCTTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR TCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRDYLQG*SFAGLG
Trigger: GCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATC...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTTGCTTTCGGTCCCAATaGAAGATTAGCCGTATTGTA +
Preference number: 4 (lower is better)
Translates to: FAGLGHLITEYEETGHLGCFRSQ*KISRIV
Trigger: TACAATACGGCTAATCTTTCATTGGGACCGAAAGCA...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp GTGCTGAATGCAGGCAGTAGCAAGGTCTACCACTCTATCAACCATAAAACTTCCTGCTTTCGGTCCCAATaGAAGATTAGCCGTATTGTA +
Preference number: 4 (lower is better)
Translates to: VLNAGSSKVYHSINHKTSCFRSQ*KISRIV
Trigger: TACAATACGGCTAATCTTTCATTGGGACCGAAAGCA...GGAAGTTTTATGGTTGATAGAGTGGTAGACCTTGCTACTGCCTGCATTCAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR TCA 90 bp GAACAAGCAAGGCCTGATTTCTATCAATCTTTGTTGTCATCTGATTGGTTAAAATTCCTCTGGGTCTCGTaGCCGTTTCCGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: EQARPDFYQSLLSSDWLKFLWVS*PFPGAQ
Trigger: TTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAA...TTTTAACCAATCAGATGACAACAAAGATTGATAGAAATCAGGCCTTGCTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp TCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAATTAGACAACCAATTCTaGCTCCAGTATTTCCTAACC +
Preference number: 4 (lower is better)
Translates to: SGWVTCTMLPTFAFGPNELDNQF*LQYFLT
Trigger: GGTTAGGAAATACTGGAGTCAGAATTGGTTGTCTAA...TTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp CATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGAAAGGAAATCTGGAAGAAATGAAGCCCTGGGTATaGTCCTGCTCAAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: HPLSLVEPLSVLKGNLEEMKPWV*SCSRSS
Trigger: GGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCAT...TTCTTCCAGATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGATAGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR GCA 90 bp ATTAGCCGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCTTTTCCAACACCTGGTaGACCACAAATTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ISRIVAACPQLSPNAGTSFSNTW*TTNFCC
Trigger: ACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAA...GCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp GTGCTGAATGCAGGCAGTAGCAAGGTCTACCACTCTATCAACCATAAAACTTCCAAAAACTGCTTCACCTaGCACTCCTCCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: VLNAGSSKVYHSINHKTSKNCFT*HSSKTF
Trigger: GAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTT...GGAAGTTTTATGGTTGATAGAGTGGTAGACCTTGCTACTGCCTGCATTCAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR GCA 90 bp CCCAACTTTCCCCTAATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTTGGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 4 (lower is better)
Translates to: PNFPLMQEQARPDFYQSLARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...CAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCATTAGGGGAAAGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR GCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGCAAGGCTGATCATTTaGTGGGCTAGGCCATTTAAT +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTARLII*WARPFN
Trigger: ATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp GGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACAGCTTTGAAACAGTACTGTaGATTCCTTCTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GNLEEDKLVPVTLCSHDSFETVL*IPSGWV
Trigger: CACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAA...GCTGTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACATTTGAAACAGTACTGTaGATTCCTTCTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTFETVL*IPSGWV
Trigger: CACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAA...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp GGTCATCTAGGTCATGACGAAATGGAAAAGCAATACCATCCACTATCACTAGTCGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GHLGHDEMEKQYHPLSLVVIMKP*VCSCSR
Trigger: TCTTGAGCAGGAGCATACCCAGGGCTTCATAATCAC...GACTAGTGATAGTGGATGGTATTGCTTTTCCATTTCGTCATGACCTAGATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CCA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTAGGCTGATCATTTGCTaGGCTAGGCCATTTAATAAC +
Preference number: 4 (lower is better)
Translates to: FAGLGHLITEYEETGHLGRLIIC*ARPFNN
Trigger: GTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR CCA 90 bp CCCAACTTTCCCCTAATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTTGACTGTGCATTCCTTCTaGCTGGGTGACTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: PNFPLMQEQARPDFYQSLTVHSF*LGDLYN
Trigger: ATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGT...CAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCATTAGGGGAAAGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
3UTR CAA 72 bp AGGCTGGGTCCACGAGACTTATTCTTTAGAGGCGAATaGAAACCTCTGTATTTTCCATCAGTAAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: RLGPRDLFFRGE*KPLYFPSVRAV
Trigger: TACTGCCCTTACTGATGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
3UTR CAA 72 bp TGCTCCTGCTCAAGAAGTTCCAGTGCTGTACACTTCTaGTGTGACTCAGATGTACCAGCATATCTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: CSCSRSSSAVHF*CDSDVPAYLGL
Trigger: TAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACATGCTTTCGGTCCCAATaGAAGATTAGCCGTATTGTA +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTCFRSQ*KISRIV
Trigger: TACAATACGGCTAATCTTTCATTGGGACCGAAAGCA...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp CTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCAACCTTCTGTTTGCAATaGACATGCAGAAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: LIICWARPFNNRVRRDRSTFCLQ*TCRSNN
Trigger: GTTGTTACTTCTGCATGTTCATTGCAAACAGAAGGT...TGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp GGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACAGCCAATGCTCTGGAATATaGGGTTTTGGGTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GNLEEDKLVPVTLCSHDSQCSGI*GFGCFS
Trigger: ACTGAAACACCCAAAACCTCATATTCCAGAGCATTG...GCTGTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR TCA 90 bp GCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCAGCTGCCTACAGAAGTTaGCAGAAGCAAGTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: ASKAVLKYACCLQKLTEAAAYRS*QKQVVN
Trigger: ATTTACAACTTGCTTCTGTCAACTTCTGTAGGCAGC...TGCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCAAACATTCTGGTATCTaGACATCTACTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPKHSGI*TSTANC
Trigger: GCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTT...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR GCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAAAAAACTGCTTCACCTaGCACTCCTCCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTKNCFT*HSSKTF
Trigger: GAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTT...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCAAAAACTGCTTCACCTaGCACTCCTCCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPKNCFT*HSSKTF
Trigger: GAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTT...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR GCA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCTGTATCAATAAAAACTaGTTCACCTGCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPCINKN*FTCHSS
Trigger: GGAGGAGTGGCAGGTGAAGCAGTTTTTATTGATACA...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR GCA 90 bp AGAAGTTCCAGTGCTGTACACTTCTTGTGTGACTCAGATGTACCAGCATATCTTTTGTATGTCTCAGGATaGAGTGGTTCCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: RSSSAVHFLCDSDVPAYLLYVSG*SGSHLQ
Trigger: TTGCAGATGGGAACCACTGCATCCTGAGACATACAA...AAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGAACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp AGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCAGCTGTCCTCAAATATaGTTGCTGCCTACAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SIKSCPQICLLPTEVDRSSCPQI*LLPTEV
Trigger: AACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCT...GCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGATGCATTCCTTCTGGCTaGGTGACTTGTACAATGTTG +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRCIPSG*VTCTML
Trigger: CAACATTGTACAAGTCACCCAGCCAGAAGGAATGCA...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp TCAATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTGCACAACTGTGCATTCCTTCTaGCTGGGTGACTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: SIKTASPATPPKHSGICTTVHSF*LGDLYN
Trigger: ATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGT...TGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAACTGTGCATTCCTTCTaGCTGGGTGACTTGTACAAT +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRTVHSF*LGDLYN
Trigger: ATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGT...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
3UTR CAA 72 bp AGTCCAGAGATTAGTAACTCAAAAGTTTGGTTAGATTaGGAGCTGGGCACAGGTGTTCACACTCATAATCCC +
Preference number: 4 (lower is better)
Translates to: SPEISNSKVWLD*ELGTGVHTHNP
Trigger: GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGAGTTACTAATCTCTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR TCA 90 bp ACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAAAGATTAGCCGTATGTACACTTCTTGTGTaGCTCAGATGTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: TCTMLPTFAFGPNERLAVCTLLV*LRCTSI
Trigger: TATGCTGGTACATCTGAGTCACACAAGAAGTGTACA...TACGGCTAATCTTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR TCA 90 bp ATGAGACAATCCTCAAAGCATTCAGCAGGCATTGCCAGAGGAAAAGCAATTAGTTGTACACTTCTTGTGTaGCTCAGATGTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: MRQSSKHSAGIARGKAISCTLLV*LRCTSI
Trigger: TATGCTGGTACATCTGAGTCACACAAGAAGTGTACA...ACTAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCTTTGAGGATTGTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTRSSRS*RNGKAI
Trigger: TATTGCTTTTCCATTTCGTCATGACCTAGATGACCT...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGGAACAAGCAAGGCCTaGTTTCTATCAATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTGTSKA*FLSIFV
Trigger: AACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCC...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp GGTCATCTAGGTCATGACGAAATGGAAAAGCAATACCATCCACTATCACTAGTCTGCTTTCGGTCCCAATaGAAGATTAGCCGTATTGTA +
Preference number: 4 (lower is better)
Translates to: GHLGHDEMEKQYHPLSLVCFRSQ*KISRIV
Trigger: TACAATACGGCTAATCTTTCATTGGGACCGAAAGCA...GACTAGTGATAGTGGATGGTATTGCTTTTCCATTTCGTCATGACCTAGATGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp TTGTGTGACTCAGATGTACCAGCATATCTTGGTTTATTTGTGAGACATTCTCTTAGTCTGCGCGCGGTATaGCTTAAACAGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCDSDVPAYLGLFVRHSLSLRAV*LKQLRL
Trigger: CAGCCTTAACTGTTTAAGTCATACCGCGCGCAGACT...AAGAGAATGTCTCACAAATAAACCAAGATATGCTGGTACATCTGAGTCACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTAAAATCCTGCATTTCTaGAATTTAACCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: FAGLGHLITEYEETGHLGKILHF*NLTLTP
Trigger: AGGGGTAAGGGTTAAATTTCAGAAATGCAGGATTTT...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp CCCAACTTTCCCCTAATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTTGTTTTCCAACACCTGGTaGACCACAAATTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PNFPLMQEQARPDFYQSLFSNTW*TTNFCC
Trigger: ACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAA...CAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCATTAGGGGAAAGTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp GCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCATTTTCCAACACCTGGTaGACCACAAATTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASKAVLKYACCLQKLTEAFSNTW*TTNFCC
Trigger: ACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAA...TGCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCTTTTCCAACACCTGGTaGACCACAAATTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPFSNTW*TTNFCC
Trigger: ACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAA...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR GCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAAACATTCTGGTATCTaGACATCTACTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRKHSGI*TSTANC
Trigger: GCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTT...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp ACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAAAGATTAGCCGTAAAACATTCTGGTATCTaGACATCTACTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: TCTMLPTFAFGPNERLAVKHSGI*TSTANC
Trigger: GCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTT...TACGGCTAATCTTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR GCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGATGTATCAATAAAAACTaGTTCACCTGCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRCINKN*FTCHSS
Trigger: GGAGGAGTGGCAGGTGAAGCAGTTTTTATTGATACA...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR GCA 90 bp ATCTCTAAATCCCTGAGGTTTGATTTGAAACAGTACTGTGCATTCCTTCTGGCTTTTGAAACAGTACTGTaGATTCCTTCTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ISKSLRFDLKQYCAFLLAFETVL*IPSGWV
Trigger: CACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAA...AGCCAGAAGGAATGCACAGTACTGTTTCAAATCAAACCTCAGGGATTTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR GCA 90 bp TTTCCCCTAATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTTGTTGTCAACAATGTTGCCAACCTaGTTTGCTTTCGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: FPLMQEQARPDFYQSLLSTMLPT*FAFGPN
Trigger: ATTGGGACCGAAAGCAAAGCAGGTTGGCAACATTGT...TGACAACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCATTAGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR GCA 90 bp GAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGTTGTATGTCTCAGGATaGAGTGGTTCCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: EMEKQYHPLSLVEPLSVLLYVSG*SGSHLQ
Trigger: TTGCAGATGGGAACCACTGCATCCTGAGACATACAA...CAGAACACTCAAAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp AGAGAATATTCTTTCTATGCTTCCTCAAGATTCCGGGGATTCTACTCTCTTTCTGCAGTGGTTCCCATCTaGAATGCTCTGGAATATGAG +
Preference number: 4 (lower is better)
Translates to: REYSFYASSRFRGFYSLSAVVPI*NALEYE
Trigger: CTCATATTCCAGAGCATTGCAGATGGGAACCACTGC...AGAAAGAGAGTAGAATCCCCGGAATCTTGAGGAAGCATAGAAAGAATATTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp AGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCCTCAAATATGCTTGCTaGCTACAGAAGTTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SIKSCPQICLLPTEVDRSLKYAC*LQKLTE
Trigger: TTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAG...GCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCTGTTTTTCCAACACCTaGTGCACCACAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPCFSNT*CTTNFC
Trigger: ACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAACA...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR CCA 90 bp ATGAGACAATCCTCAAAGCATTCAGCAGGCATTGCCAGAGGAAAAGCAATTAGTAGGCTGATCATTTGCTaGGCTAGGCCATTTAATAAC +
Preference number: 4 (lower is better)
Translates to: MRQSSKHSAGIARGKAISRLIIC*ARPFNN
Trigger: GTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT...ACTAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCTTTGAGGATTGTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CCA 90 bp ACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAAAGATTAGCCGTAAGGCTGATCATTTGCTaGGCTAGGCCATTTAATAAC +
Preference number: 4 (lower is better)
Translates to: TCTMLPTFAFGPNERLAVRLIIC*ARPFNN
Trigger: GTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT...TACGGCTAATCTTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGGCTGATCATTTGCTaGGCTAGGCCATTTAATAAC +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRRLIIC*ARPFNN
Trigger: GTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCT...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp TCCACTATCACTAGTCGAACCTTTGAGTGTTCTGAAAGGAAATCTGGAAGAAGATGCATTCCTTCTGGCTaGGTGACTTGTACAATGTTG +
Preference number: 4 (lower is better)
Translates to: STITSRTFECSERKSGRRCIPSG*VTCTML
Trigger: CAACATTGTACAAGTCACCCAGCCAGAAGGAATGCA...TCTTCTTCCAGATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGATAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
3UTR CAA 72 bp GAGTTGATGATGGAACCGGTTAAGACGTTTGGGGCTTaGAGTGTTCTGAAAGGAAATCTGGAAGAAGATAAA +
Preference number: 4 (lower is better)
Translates to: ELMMEPVKTFGA*SVLKGNLEEDK
Trigger: TTTATCTTCTTCCAGATTTCCTTTCAGAACACTCAAAGCCCCAAACGTCTTAACCGGTTCCATCATCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR TCA 90 bp ATCTCTAAATCCCTGAGGTTTGATTTGAAACAGTACTGTGCATTCCTTCTGGCTTGTACACTTCTTGTGTaGCTCAGATGTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: ISKSLRFDLKQYCAFLLACTLLV*LRCTSI
Trigger: TATGCTGGTACATCTGAGTCACACAAGAAGTGTACA...AGCCAGAAGGAATGCACAGTACTGTTTCAAATCAAACCTCAGGGATTTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR TCA 90 bp GACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAATGTACACTTCTTGTGTaGCTCAGATGTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: DNVLSIKSCPQICLLPTECTLLV*LRCTSI
Trigger: TATGCTGGTACATCTGAGTCACACAAGAAGTGTACA...TTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp TTATTTGCAAGGCTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: LFARLIICWARPFNNRVRRSSRS*RNGKAI
Trigger: TATTGCTTTTCCATTTCGTCATGACCTAGATGACCT...TCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp TCACTAGTCGAACCTTTGAGTGTTCTGAAAGGAAATCTGGAAGAAGATAAACTTGATTATTTGCAAGGCTaGTCATTTGCTGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SLVEPLSVLKGNLEEDKLDYLQG*SFAGLG
Trigger: GCCTAGCCCAGCAAATGATCAGCCTTGCAAATAATC...AAGTTTATCTTCTTCCAGATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR TCA 90 bp CTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGACGAAATTACAGCTAATCTGTaGTTATTTGCAAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LGHLITEYEETGHLGHDEITANL*LFARLI
Trigger: GATCAGCCTTGCAAATAATCACAGATTAGCTGTAAT...TTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAATTACAGCTAATCTGTaGTTATTTGCAAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTITANL*LFARLI
Trigger: GATCAGCCTTGCAAATAATCACAGATTAGCTGTAAT...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp TTATTTGCAAGGCTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAGGAACAAGCAAGGCCTaGTTTCTATCAATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LFARLIICWARPFNNRVRGTSKA*FLSIFV
Trigger: AACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCC...TCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGCAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR TCA 90 bp TCCACTATCACTAGTCGAACCTTTGAGTGTTCTGAAAGGAAATCTGGAAGAAGATGCTTTCGGTCCCAATaGAAGATTAGCCGTATTGTA +
Preference number: 4 (lower is better)
Translates to: STITSRTFECSERKSGRRCFRSQ*KISRIV
Trigger: TACAATACGGCTAATCTTTCATTGGGACCGAAAGCA...TCTTCTTCCAGATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGATAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR GCA 90 bp AGACATTCTCTTCTGATAATTTGCAGAGTTTCTAAGGCTTCTGCTTTAGATATCATGAAGCCCTGGGTATaGTCCTGCTCAAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RHSLLIICRVSKASALDIMKPWV*SCSRSS
Trigger: GGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCAT...GATATCTAAAGCAGAAGCCTTAGAAACTCTGCAAATTATCAGAAGAGAATGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp CTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTCCATTTTCCAACACCTGGTaGACCACAAATTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LGPRDLFFRGELKPLYFPFSNTW*TTNFCC
Trigger: ACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAA...TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp AAAGGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACAAACATTCTGGTATCTaGACATCTACTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: KGNLEEDKLVPVTLCSHDKHSGI*TSTANC
Trigger: GCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTT...GTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR GCA 90 bp ATCTCTAAATCCCTGAGGTTTGATTTGAAACAGTACTGTGCATTCCTTCTGGCTAAAAACTGCTTCACCTaGCACTCCTCCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: ISKSLRFDLKQYCAFLLAKNCFT*HSSKTF
Trigger: GAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTT...AGCCAGAAGGAATGCACAGTACTGTTTCAAATCAAACCTCAGGGATTTAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp ATTATCAAGAGTGAAATCCTCCAAAGCTTTTCGGTGTTCCTCTCCCTTGTGTTTTGTATCAATAAAAACTaGTTCACCTGCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: IIKSEILQSFSVFLSLVFCINKN*FTCHSS
Trigger: GGAGGAGTGGCAGGTGAAGCAGTTTTTATTGATACA...AAACACAAGGGAGAGGAACACCGAAAAGCTTTGGAGGATTTCACTCTTGATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR GCA 90 bp GACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTCCTCAAATATGCTTaGTGCCTACAGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: DNVLSIKSCPQICLLPTEVLKYA*CLQKLT
Trigger: TGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGAC...TTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CCA 90 bp ATGAGACAATCCTCAAAGCATTCAGCAGGCATTGCCAGAGGAAAAGCAATTAGTTGTTTTTCCAACACCTaGTGCACCACAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: MRQSSKHSAGIARGKAISCFSNT*CTTNFC
Trigger: ACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAACA...ACTAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCTTTGAGGATTGTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp TCCAGTGCTGTACACTTCTTGTGTGACTCAGATGTACCAGCATATCTTGGTTTATGTTTTTCCAACACCTaGTGCACCACAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSAVHFLCDSDVPAYLGLCFSNT*CTTNFC
Trigger: ACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAACA...TAAACCAAGATATGCTGGTACATCTGAGTCACACAAGAAGTGTACAGCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGATGTTTTTCCAACACCTaGTGCACCACAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRCFSNT*CTTNFC
Trigger: ACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAACA...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR TCA 90 bp CGTAAGAGAATATTCTTTCTATGCTTCCTCAAGATTCCGGGGATTCTACTCTCTAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: RKRIFFLCFLKIPGILLSRSSRS*RNGKAI
Trigger: TATTGCTTTTCCATTTCGTCATGACCTAGATGACCT...AGAGAGTAGAATCCCCGGAATCTTGAGGAAGCATAGAAAGAATATTCTCTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR TCA 90 bp GAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGAGGTCATCTAGGTCATaGCGAAATGGAAAAGCAATA +
Preference number: 4 (lower is better)
Translates to: EMEKQYHPLSLVEPLSVLRSSRS*RNGKAI
Trigger: TATTGCTTTTCCATTTCGTCATGACCTAGATGACCT...CAGAACACTCAAAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR TCA 90 bp TCAAGAGTGAAATCCTCCAAAGCTTTTCGGTGTTCCTCTCCCTTGTGTTTTTCTATTACAGCTAATCTGTaGTTATTTGCAAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: SRVKSSKAFRCSSPLCFSITANL*LFARLI
Trigger: GATCAGCCTTGCAAATAATCACAGATTAGCTGTAAT...AGAAAAACACAAGGGAGAGGAACACCGAAAAGCTTTGGAGGATTTCACTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584617.5
CDS-3UTR TCA 90 bp CATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGACGAAATGGAAGGAACAAGCAAGGCCTaGTTTCTATCAATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: HLITEYEETGHLGHDEMEGTSKA*FLSIFV
Trigger: AACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCC...TTCCATTTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR GCA 90 bp CTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTCCAAAGGAACCTTCTGTTTaGAATGAACATGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LGPRDLFFRGELKPLYFPKEPSV*NEHAEV
Trigger: TACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTT...TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR GCA 90 bp AAAGGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACTATCTGCACATCTACTaGCAACTGCATACTTTGCTA +
Preference number: 4 (lower is better)
Translates to: KGNLEEDKLVPVTLCSHDYLHIY*QLHTLL
Trigger: TAGCAAAGTATGCAGTTGGCAGTAGATGTGCAGATA...GTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584617.5
CDS-3UTR CCA 90 bp CAAGATATCAGTTCTCTCATCCATATACTGAATATAATAATCTACGTAAGCGGGGTGATTATGAAGCCCTaGGTATGCTCCTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: QDISSLIHILNIIIYVSGVIMKP*VCSCSR
Trigger: TCTTGAGCAGGAGCATACCCAGGGCTTCATAATCAC...CCCGCTTACGTAGATTATTATATTCAGTATATGGATGAGAGAACTGATATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CCA 90 bp GAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGTGTTTTTCCAACACCTaGTGCACCACAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: EMEKQYHPLSLVEPLSVLCFSNT*CTTNFC
Trigger: ACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAACA...CAGAACACTCAAAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR CCA 90 bp CATGACGAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACCTGATTTCTGTTTTTCCAACACCTaGTGCACCACAAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: HDEMEKQYHPLSLVEPDFCFSNT*CTTNFC
Trigger: ACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAACA...GAAATCAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTCGTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR TCA 90 bp GACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAATACTGACTTTGATTTaGAACAGTACTGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: DNVLSIKSCPQICLLPTEILTLI*NSTVHS
Trigger: GGAATGCACAGTACTGTTTCAAATCAAAGTCAGTAT...TTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
3UTR CAA 72 bp GTGGTTCCCATCTGCAATGCTCTGGAATATGAGGTTTaGGGTGTTTCAGTTAATTACGTAAGAGAATATTCT +
Preference number: 4 (lower is better)
Translates to: VVPICNALEYEV*GVSVNYVREYS
Trigger: AGAATATTCTCTTACGTAATTAACTGAAACACCCAAAACCTCATATTCCAGAGCATTGCAGATGGGAACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp AGAGAATATTCTTTCTATGCTTCCTCAAGATTCCGGGGATTCTACTCTCTTTCTAAAATCCTGCATTTCTaGAATTTAACCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: REYSFYASSRFRGFYSLSKILHF*NLTLTP
Trigger: AGGGGTAAGGGTTAAATTTCAGAAATGCAGGATTTT...AGAAAGAGAGTAGAATCCCCGGAATCTTGAGGAAGCATAGAAAGAATATTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR GCA 90 bp TTGTGTGACTCAGATGTACCAGCATATCTTGGTTTATTTGTGAGACATTCTCTTTTTTCCAACACCTGGTaGACCACAAATTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LCDSDVPAYLGLFVRHSLFSNTW*TTNFCC
Trigger: ACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAA...AAGAGAATGTCTCACAAATAAACCAAGATATGCTGGTACATCTGAGTCACACAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp AGACATTCTCTTCTGATAATTTGCAGAGTTTCTAAGGCTTCTGCTTTAGATATCACCTTCTGTTTGCAATaGACATGCAGAAGTAACAAC +
Preference number: 4 (lower is better)
Translates to: RHSLLIICRVSKASALDITFCLQ*TCRSNN
Trigger: GTTGTTACTTCTGCATGTTCATTGCAAACAGAAGGT...GATATCTAAAGCAGAAGCCTTAGAAACTCTGCAAATTATCAGAAGAGAATGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR TCA 90 bp TTGTGTGACTCAGATGTACCAGCATATCTTGGTTTATTTGTGAGACATTCTCTTTCTTTAGAGGCGAATTaGAACCTCTGTATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LCDSDVPAYLGLFVRHSLSLEAN*NLCIFH
Trigger: ATGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGA...AAGAGAATGTCTCACAAATAAACCAAGATATGCTGGTACATCTGAGTCACACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp CAAGATATCAGTTCTCTCATCCATATACTGAATATAATAATCTACGTAAGCGGGTTAGACAACCAATTCTaGCTCCAGTATTTCCTAACC +
Preference number: 4 (lower is better)
Translates to: QDISSLIHILNIIIYVSGLDNQF*LQYFLT
Trigger: GGTTAGGAAATACTGGAGTCAGAATTGGTTGTCTAA...CCCGCTTACGTAGATTATTATATTCAGTATATGGATGAGAGAACTGATATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR TCA 90 bp GAACAAGCAAGGCCTGATTTCTATCAATCTTTGTTGTCATCTGATTGGTTAAAAATTACAGCTAATCTGTaGTTATTTGCAAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: EQARPDFYQSLLSSDWLKITANL*LFARLI
Trigger: GATCAGCCTTGCAAATAATCACAGATTAGCTGTAAT...TTTTAACCAATCAGATGACAACAAAGATTGATAGAAATCAGGCCTTGCTTGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
3UTR CAA 72 bp ATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTaGTTGTCATCTGATTGGTTAAAATTACAGCTAATC +
Preference number: 4 (lower is better)
Translates to: MQEQARPDFYQS*LSSDWLKLQLI
Trigger: GATTAGCTGTAATTTTAACCAATCAGATGACAACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482007.5
ENST00000487525.5
ENST00000584617.5
CDS-3UTR CAA 90 bp GAAGGCCGAGGCGAGAGAACGAAGACTGAGGCGGCGCTGACGGCGGCCGGTGTGCAGGAGTCGTTACCTTaGCTAAGCTCGGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: EGRGERTKTEAALTAAGVQESLP*LSSEGF
Trigger: GAAACCCTCCGAGCTTAGCAAAGGTAACGACTCCTG...CACACCGGCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCGCCTCGGCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS GCA 90 bp TTCACCCGCACCGCTGGAGACAGCGGGAAACTCACCAAATCCCGCTaGATTTCAAAGCGGAACGTCTTCCCGCGCATCGCAGGCTCACCT +
Preference number: 5 (lower is better)
Translates to: FTRTAGDSGKLTKSR*ISKRNVFPRIAGSP
Trigger: AGGTGAGCCTGCGATGCGCGGGAAGACGTTCCGCTTTGAAATGCAGCGGGATTTGGTGAGTTTCCCGCTGTCTCCAGCGGTGCGGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337432.9
ENST00000421782.3
ENST00000475762.5
ENST00000476741.2
ENST00000482007.5
ENST00000486827.1
ENST00000487525.5
ENST00000583539.5
CDS CCA 90 bp CTCAGCAGTCTGGAACCCCGCAGACACCAGCTTCACCCGCACCGCTaGAGACAGCGGGAAACTCACCAAATCCCGCTGCATTTCAAAGCG +
Preference number: 5 (lower is better)
Translates to: LSSLEPRRHQLHPHR*RQRETHQIPLHFKA
Trigger: CGCTTTGAAATGCAGCGGGATTTGGTGAGTTTCCCGCTGTCTCCAGCGGTGCGGGTGAAGCTGGTGTCTGCGGGGTTCCAGACTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337432.9
ENST00000421782.3
ENST00000475762.5
ENST00000476741.2
ENST00000482007.5
ENST00000486827.1
ENST00000487525.5
ENST00000583539.5
CDS CCA 90 bp TTGCTAAGCTCGGAGGGTTTCACCTCTAGGAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGCTTCACCCGCACCGCTGGAGACAGC +
Preference number: 5 (lower is better)
Translates to: LLSSEGFTSRSSSAV*NPADTSFTRTAGDS
Trigger: GCTGTCTCCAGCGGTGCGGGTGAAGCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACTCCTAGAGGTGAAACCCTCCGAGCTTAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337432.9
ENST00000421782.3
ENST00000475762.5
ENST00000476741.2
ENST00000482007.5
ENST00000486827.1
ENST00000487525.5
ENST00000583539.5
ENST00000584617.5
CDS-3UTR CAA 90 bp GAAGGCCGAGGCGAGAGAACGAAGACTGAGGCGGCGCTGACGGCGGCCGGTGTGAGTGCTGTACACTTCTaGTGTGACTCAGATGTACCA +
Preference number: 5 (lower is better)
Translates to: EGRGERTKTEAALTAAGVSAVHF*CDSDVP
Trigger: TGGTACATCTGAGTCACACAAGAAGTGTACAGCACT...CACACCGGCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCGCCTCGGCCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS TCA 90 bp TTGCAGAGAGAGGAAGGGGCAGGGCCACCCCACAGAGCAGTAGGGTaGTTCTGCTACTGCAGTGGGCCTTTGAGTGTTCTGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LQREEGAGPPHRAVG*FCYCSGPLSVLKGN
Trigger: ATTTCCTTTCAGAACACTCAAAGGCCCACTGCAGTAGCAGAATCACCCTACTGCTCTGTGGGGTGGCCCTGCCCCTTCCTCTCTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425173.5
CDS GCA 90 bp TCCAGCCCGGGCGGTAGAGCCAGATTCCTCTCCCTTGTGTTTTTCTaGTATAAGCTGAAGGTGCTGAATGCAGGCAGTAGCAAGGTCTAC +
Preference number: 5 (lower is better)
Translates to: SSPGGRARFLSLVFF*YKLKVLNAGSSKVY
Trigger: GTAGACCTTGCTACTGCCTGCATTCAGCACCTTCAGCTTATAGCAGAAAAACACAAGGGAGAGGAATCTGGCTCTACCGCCCGGGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR CAA 90 bp AAGTGGAGTCGAGGAGCTCTTTCACGCTGTAAACATGGACGTGGGAGGAAGCAGAGCATTCAGCAGGCATaGCCAGAGGAAAAGCAATTA +
Preference number: 5 (lower is better)
Translates to: KWSRGALSRCKHGRGRKQSIQQA*PEEKQL
Trigger: TAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCT...CTGCTTCCTCCCACGTCCATGTTTACAGCGTGAAAGAGCTCCTCGACTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CAA 90 bp CTTCCTCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCACACCACAAATTTCTGTaGTTTTCATTAAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: LPLGLVTVSGCSRNLLFAHHKFL*FSLRAL
Trigger: GAGTGCCCTTAATGAAAACAACAGAAATTTGTGGTG...TGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CAA 90 bp TCTGGGTCTCGTGACCGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAATGAAAGCATTCAGCAGGCATaGCCAGAGGAAAAGCAATTA +
Preference number: 5 (lower is better)
Translates to: SGSRDRFRVLKEPSVCNESIQQA*PEEKQL
Trigger: TAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCT...TTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACGGTCACGAGACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CAA 90 bp GCAAGGCTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACTGCCAACTGCATACTTaGCTAAGCTCGGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: ARLIICWARPFNNRVRRDCQLHT*LSSEGF
Trigger: GAAACCCTCCGAGCTTAGCAAAGTATGCAGTTGGCA...GTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584617.5
CDS-3UTR CAA 90 bp ACACAAAATCCTGCATTTCTGAAATTTAACCCTTACCCCTTGGATCTTGGAACACCGGTGTGCCTCAGCTaGCCATCAGGAGTCGTTACC +
Preference number: 5 (lower is better)
Translates to: TQNPAFLKFNPYPLDLGTPVCLS*PSGVVT
Trigger: GGTAACGACTCCTGATGGCAAGCTGAGGCACACCGG...TGTTCCAAGATCCAAGGGGTAAGGGTTAAATTTCAGAAATGCAGGATTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CAA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCAGTCAGGAGAATCGCTaGAACCTGGGAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPSQENR*NLGGEG
Trigger: ACCTTCACCTCCCAGGTTCAAGCGATTCTCCTGACT...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR CAA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTGATATCCCAACTTCTTaGCTAAGCTCGGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: FAGLGHLITEYEETGHLGDIPTS*LSSEGF
Trigger: GAAACCCTCCGAGCTTAGCAAAGAAGTTGGGATATC...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CAA 90 bp ATTAGCCGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCCAATGTTGCCAACCTTaGCTTTCGGTCCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: ISRIVAACPQLSPNAGTSQCCQP*LSVPMK
Trigger: TTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTG...GCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp GCAAGGCTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACGTGACTTGTACAATGTaGCCAACCTTTGCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: ARLIICWARPFNNRVRRDVTCTM*PTFAFG
Trigger: ACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCAC...GTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAGCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp CGTTTCCGGGTGCTCAAGGAACCTTCTGTTTGCAATGAACATGCAGAAGTAACATTCTGGCTGGGTGACTaGTACAATGTTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: RFRVLKEPSVCNEHAEVTFWLGD*YNVANL
Trigger: AAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAA...TGTTACTTCTGCATGTTCATTGCAAACAGAAGGTTCCTTGAGCACCCGGAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR CAA 90 bp CTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGACGAATTCTGGCTGGGTGACTaGTACAATGTTGCCAACCTG +
Preference number: 5 (lower is better)
Translates to: LGHLITEYEETGHLGHDEFWLGD*YNVANL
Trigger: CAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAA...TTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR CAA 90 bp CTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGACGAAGATATCCCAACTTCTTaGCTAAGCTCGGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LGHLITEYEETGHLGHDEDIPTS*LSSEGF
Trigger: GAAACCCTCCGAGCTTAGCAAAGAAGTTGGGATATC...TTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CAA 90 bp AGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCGATATCCCAACTTCTTaGCTAAGCTCGGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SIKSCPQICLLPTEVDRSDIPTS*LSSEGF
Trigger: GAAACCCTCCGAGCTTAGCAAAGAAGTTGGGATATC...GCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp TTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTAGTGCTGTACACTTCTaGTGTGACTCAGATGTACCA +
Preference number: 5 (lower is better)
Translates to: FAGLGHLITEYEETGHLGSAVHF*CDSDVP
Trigger: TGGTACATCTGAGTCACACAAGAAGTGTACAGCACT...ACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000487525.5
CDS-3UTR CAA 90 bp GCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCACGGTGTTCCTCTCCCTaGTGTTTTTCTGCTATAAGC +
Preference number: 5 (lower is better)
Translates to: ASKAVLKYACCLQKLTEARCSSP*CFSAIS
Trigger: GCTTATAGCAGAAAAACACAAGGGAGAGGAACACCG...TGCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp CTGATCATTTGCTGGGCTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCAGTGACTTGTACAATGTaGCCAACCTTTGCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: LIICWARPFNNRVRRDRSVTCTM*PTFAFG
Trigger: ACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCAC...TGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCAAATGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp GCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCATTCTGGCTGGGTGACTaGTACAATGTTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: ASKAVLKYACCLQKLTEAFWLGD*YNVANL
Trigger: AAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAA...TGCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp CAAGATATCAGTTCTCTCATCCATATACTGAATATAATAATCTACGTAAGCGGGCCGGTGTGCCTCAGCTaGCCATCAGGAGTCGTTACC +
Preference number: 5 (lower is better)
Translates to: QDISSLIHILNIIIYVSGPVCLS*PSGVVT
Trigger: GGTAACGACTCCTGATGGCAAGCTGAGGCACACCGG...CCCGCTTACGTAGATTATTATATTCAGTATATGGATGAGAGAACTGATATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CAA 90 bp TCTGGCTGGGTGACTTGTACAATGTTGCCAACCTTTGCTTTCGGTCCCAATGAACTTACCCCTTGGATCTaGGAACAGCAAAAATTAGAC +
Preference number: 5 (lower is better)
Translates to: SGWVTCTMLPTFAFGPNELTPWI*EQQKLD
Trigger: GTCTAATTTTTGCTGTTCCAAGATCCAAGGGGTAAG...TTCATTGGGACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCACCCAGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CAA 90 bp ATGAGACAATCCTCAAAGCATTCAGCAGGCATTGCCAGAGGAAAAGCAATTAGTCGGTGTTCCTCTCCCTaGTGTTTTTCTGCTATAAGC +
Preference number: 5 (lower is better)
Translates to: MRQSSKHSAGIARGKAISRCSSP*CFSAIS
Trigger: GCTTATAGCAGAAAAACACAAGGGAGAGGAACACCG...ACTAATTGCTTTTCCTCTGGCAATGCCTGCTGAATGCTTTGAGGATTGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CAA 90 bp ATTAGCCGTATTGTAGCAGCATGTCCCCAACTTTCCCCTAATGCAGGAACAAGCTCACTAGTCGAACCTTaGAGTGTTCTGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: ISRIVAACPQLSPNAGTSSLVEP*SVLKGN
Trigger: ATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGA...GCTTGTTCCTGCATTAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp AGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCCAATGTTGCCAACCTTaGCTTTCGGTCCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: SIKSCPQICLLPTEVDRSQCCQP*LSVPMK
Trigger: TTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTG...GCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp CTAGGCCATTTAATAACCGAGTACGAAGAGACAGGTCATCTAGGTCATGACGAACAATGTTGCCAACCTTaGCTTTCGGTCCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: LGHLITEYEETGHLGHDEQCCQP*LSVPMK
Trigger: TTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTG...TTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp GCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCAGTGACTTGTACAATGTaGCCAACCTTTGCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: ASKAVLKYACCLQKLTEAVTCTM*PTFAFG
Trigger: ACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCAC...TGCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp GTTCTGAAAGGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCAGGAGTCGTTACCTTaGCTAAGCTCGGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: VLKGNLEEDKLVPVTLCSQESLP*LSSEGF
Trigger: GAAACCCTCCGAGCTTAGCAAAGGTAACGACTCCTG...ACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCCTTTCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CAA 90 bp GCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAAGTTGACAGAAGCATGTCCTCAAATATGCTaGCTGCCTACAGAAGTTGAC +
Preference number: 5 (lower is better)
Translates to: ASKAVLKYACCLQKLTEACPQIC*LPTEVD
Trigger: GTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACA...TGCTTCTGTCAACTTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS CCA 90 bp TGTATCAATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTaGTATCTGCACATCTACTGCCAACTGCATACTTTGCTAAGCTCG +
Preference number: 5 (lower is better)
Translates to: CINKNCFTCHSSKTF*YLHIYCQLHTLLSS
Trigger: CGAGCTTAGCAAAGTATGCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATTGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584617.5
CDS-3UTR CAA 90 bp AAAGGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACCGGTGTTCCTCTCCCTaGTGTTTTTCTGCTATAAGC +
Preference number: 5 (lower is better)
Translates to: KGNLEEDKLVPVTLCSHDRCSSP*CFSAIS
Trigger: GCTTATAGCAGAAAAACACAAGGGAGAGGAACACCG...GTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR CAA 90 bp TTTCCCCTAATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTTGTTGTCATTCTGGCTGGGTGACTaGTACAATGTTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: FPLMQEQARPDFYQSLLSFWLGD*YNVANL
Trigger: AAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAA...TGACAACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCATTAGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp AAAGGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTCACGACTGTTGCCAACCTGCTTaGCTTTCGGTCCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: KGNLEEDKLVPVTLCSHDCCQPA*LSVPMK
Trigger: TTTCATTGGGACCGAAAGCAAAGCAGGTTGGCAACA...GTCGTGACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR CAA 90 bp GGGGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACACACCACAAATTTCTGTaGTTTTCATTAAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: GDNVLSIKSCPQICLLPTHHKFL*FSLRAL
Trigger: GAGTGCCCTTAATGAAAACAACAGAAATTTGTGGTG...TGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp TCAAAAGTTTGGTTAGATTTGGAGCTGGGCACAGGTGTTCACACTCATAATCCCCACCACAAATTTCTGTaGTTTTCATTAAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: SKVWLDLELGTGVHTHNPHHKFL*FSLRAL
Trigger: GAGTGCCCTTAATGAAAACAACAGAAATTTGTGGTG...GGGATTATGAGTGTGAACACCTGTGCCCAGCTCCAAATCTAACCAAACTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622327.4
CDS-3UTR CAA 90 bp CAGGCAGTAGCAAGGTCTACCACTCTATCAACCATAAAACTTCCCTCTGTATCATCACTAGTCGAACCTTaGAGTGTTCTGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: QAVARSTTLSTIKLPSVSSLVEP*SVLKGN
Trigger: ATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGA...TGATACAGAGGGAAGTTTTATGGTTGATAGAGTGGTAGACCTTGCTACTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR CAA 90 bp TTTCCCCTAATGCAGGAACAAGCAAGGCCTGATTTCTATCAATCTTTGTTGTCAGTGACTTGTACAATGTaGCCAACCTGCTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: FPLMQEQARPDFYQSLLSVTCTM*PTCFAF
Trigger: GAAAGCAAAGCAGGTTGGCAACATTGTACAAGTCAC...TGACAACAAAGATTGATAGAAATCAGGCCTTGCTTGTTCCTGCATTAGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR CAA 90 bp AGGCTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTCTTACCCCTTGGATCTaGGAACAGCAAAAATTAGAC +
Preference number: 5 (lower is better)
Translates to: RLGPRDLFFRGELKPLYFLTPWI*EQQKLD
Trigger: GTCTAATTTTTGCTGTTCCAAGATCCAAGGGGTAAG...AAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CAA 90 bp CTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTCCACACCACAAATTTCTGTaGTTTTCATTAAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: LGPRDLFFRGELKPLYFPHHKFL*FSLRAL
Trigger: GAGTGCCCTTAATGAAAACAACAGAAATTTGTGGTG...TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CAA 90 bp GGACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGATCACTAGTCGAACCTTaGAGTGTTCTGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: GQCSKHQKLSSNMLAAYRSLVEP*SVLKGN
Trigger: ATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGA...TCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp AGGTCTACCACTCTATCAACCATAAAACTTCCCTCTGTATCAATAAAAACTGCTTTCTGGCTGGGTGACTaGTACAATGTTGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: RSTTLSTIKLPSVSIKTAFWLGD*YNVANL
Trigger: AAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAA...AGCAGTTTTTATTGATACAGAGGGAAGTTTTATGGTTGATAGAGTGGTAGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000584617.5
CDS-3UTR CAA 90 bp GACAATGTTCTAAGCATCAAAAGCTGTCCTCAAATATGCTTGCTGCCTACAGAATGCTGCCTACAGAAGTaGACAGAAGCAAGTTGTAAA +
Preference number: 5 (lower is better)
Translates to: DNVLSIKSCPQICLLPTECCLQK*TEASCK
Trigger: TTTACAACTTGCTTCTGTCAACTTCTGTAGGCAGCA...TTCTGTAGGCAGCAAGCATATTTGAGGACAGCTTTTGATGCTTAGAACATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583539.5
CDS-3UTR CAA 90 bp GAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGCACCACAAATTTCTGTaGTTTTCATTAAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: EMEKQYHPLSLVEPLSVLHHKFL*FSLRAL
Trigger: GAGTGCCCTTAATGAAAACAACAGAAATTTGTGGTG...CAGAACACTCAAAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR CAA 90 bp CATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGAAAGGAAATCTGGAAGAACACCACAAATTTCTGTaGTTTTCATTAAGGGCACTC +
Preference number: 5 (lower is better)
Translates to: HPLSLVEPLSVLKGNLEEHHKFL*FSLRAL
Trigger: GAGTGCCCTTAATGAAAACAACAGAAATTTGTGGTG...TTCTTCCAGATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGATAGTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000482007.5
CDS-3UTR CAA 90 bp GAAATGGAAAAGCAATACCATCCACTATCACTAGTCGAACCTTTGAGTGTTCTGTCACTAGTCGAACCTTaGAGTGTTCTGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: EMEKQYHPLSLVEPLSVLSLVEP*SVLKGN
Trigger: ATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGA...CAGAACACTCAAAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTCCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp TCACTAGTCGAACCTTTGAGTGTTCTGAAAGGAAATCTGGAAGAAGATAAACTTCAATGTTGCCAACCTTaGCTTTCGGTCCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: SLVEPLSVLKGNLEEDKLQCCQP*LSVPMK
Trigger: TTTCATTGGGACCGAAAGCAAAGGTTGGCAACATTG...AAGTTTATCTTCTTCCAGATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp TCACTAGTCGAACCTTTGAGTGTTCTGAAAGGAAATCTGGAAGAAGATAAACTTGTGACTTGTACAATGTaGCCAACCTTTGCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: SLVEPLSVLKGNLEEDKLVTCTM*PTFAFG
Trigger: ACCGAAAGCAAAGGTTGGCAACATTGTACAAGTCAC...AAGTTTATCTTCTTCCAGATTTCCTTTCAGAACACTCAAAGGTTCGACTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475762.5
ENST00000482007.5
ENST00000584617.5
CDS-3UTR CAA 90 bp AATAAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTGGTATCTGCACATCTTCTTTAGAGGCGAATaGAAACCTCTGTATTTTCCA +
Preference number: 5 (lower is better)
Translates to: NKNCFTCHSSKTFWYLHIFFRGE*KPLYFP
Trigger: TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAA...GATGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475762.5
CDS-3UTR CAA 90 bp AGGCTGGGTCCACGAGACTTATTCTTTAGAGGCGAATTGAAACCTCTGTATTTTCTGGAATATGAGGTTTaGGGTGTTTCAGTTAATTAC +
Preference number: 5 (lower is better)
Translates to: RLGPRDLFFRGELKPLYFLEYEV*GVSVNY
Trigger: GTAATTAACTGAAACACCCAAAACCTCATATTCCAG...AAAATACAGAGGTTTCAATTCGCCTCTAAAGAATAAGTCTCGTGGACCCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CAA 90 bp GTTCTGAAAGGAAATCTGGAAGAAGATAAACTTGTGCCAGTAACTCTGTGTAGTAAGACGTTTGGGGCTTaGAGTGTTCTGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: VLKGNLEEDKLVPVTLCSKTFGA*SVLKGN
Trigger: ATTTCCTTTCAGAACACTCAAAGCCCCAAACGTCTT...ACTACACAGAGTTACTGGCACAAGTTTATCTTCTTCCAGATTTCCTTTCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487525.5
CDS-3UTR CAA 90 bp AGAGAATATTCTTTCTATGCTTCCTCAAGATTCCGGGGATTCTACTCTCTTTCTCAACTTTGCATGACTTaGGGCAAGTTACTTCACTTT +
Preference number: 5 (lower is better)
Translates to: REYSFYASSRFRGFYSLSQLCMT*GKLLHF
Trigger: AAAGTGAAGTAACTTGCCCAAAGTCATGCAAAGTTG...AGAAAGAGAGTAGAATCCCCGGAATCTTGAGGAAGCATAGAAAGAATATTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486827.1
CDS-3UTR CAA 90 bp ACACAAAATCCTGCATTTCTGAAATTTAACCCTTACCCCTTGGATCTTGGAACACTGGAATATGAGGTTTaGGGTGTTTCAGTTAATTAC +
Preference number: 5 (lower is better)
Translates to: TQNPAFLKFNPYPLDLGTLEYEV*GVSVNY
Trigger: GTAATTAACTGAAACACCCAAAACCTCATATTCCAG...TGTTCCAAGATCCAAGGGGTAAGGGTTAAATTTCAGAAATGCAGGATTTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS-3UTR CAA 90 bp CAAGATATCAGTTCTCTCATCCATATACTGAATATAATAATCTACGTAAGCGGGTTCTTTAGAGGCGAATaGAAACCTCTGTATTTTCCA +
Preference number: 5 (lower is better)
Translates to: QDISSLIHILNIIIYVSGFFRGE*KPLYFP
Trigger: TGGAAAATACAGAGGTTTCAATTCGCCTCTAAAGAA...CCCGCTTACGTAGATTATTATATTCAGTATATGGATGAGAGAACTGATATCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS TCA 72 bp AAGGCCGAGGCGAGAGAACGAAGACTGAGGCGGCGCTaGCGGCGGCCGGTGTGCCTCAGCTTGCCATCAGGA +
Preference number: 6 (lower is better)
Translates to: KAEARERRLRRR*RRPVCLSLPSG
Trigger: TCCTGATGGCAAGCTGAGGCACACCGGCCGCCGTCAGCGCCGCCTCAGTCTTCGTTCTCTCGCCTCGGCCTT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS CCA 72 bp TCGGAGGGTTTCACCTCTAGGAGTTCCTCAGCAGTCTaGAACCCCGCAGACACCAGCTTCACCCGCACCGCT +
Preference number: 6 (lower is better)
Translates to: SEGFTSRSSSAV*NPADTSFTRTA
Trigger: AGCGGTGCGGGTGAAGCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACTCCTAGAGGTGAAACCCTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337432.9
ENST00000421782.3
ENST00000475762.5
ENST00000476741.2
ENST00000482007.5
ENST00000486827.1
ENST00000487525.5
ENST00000583539.5
ENST00000584617.5
CDS TCA 72 bp GAGGAAGGGGCAGGGCCACCCCACAGAGCAGTAGGGTaGTTCTGCTACTGCAGTGGGCCTTTGAGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: EEGAGPPHRAVG*FCYCSGPLSVL
Trigger: CAGAACACTCAAAGGCCCACTGCAGTAGCAGAATCACCCTACTGCTCTGTGGGGTGGCCCTGCCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425173.5
CDS CAA 90 bp GACGGCGGCCGGTGTGCCTCAGCTTGCCATCAGGAGTCGTTACCTTaGCTAAGCTCGGAGGGTTTCACCTCTAGGAGTTCCTCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: DGGRCASACHQESLP*LSSEGFTSRSSSAV
Trigger: GACTGCTGAGGAACTCCTAGAGGTGAAACCCTCCGAGCTTAGCAAAGGTAACGACTCCTGATGGCAAGCTGAGGCACACCGGCCGCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS CAA 72 bp CGGTGTGCCTCAGCTTGCCATCAGGAGTCGTTACCTTaGCTAAGCTCGGAGGGTTTCACCTCTAGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: RCASACHQESLP*LSSEGFTSRSS
Trigger: GGAACTCCTAGAGGTGAAACCCTCCGAGCTTAGCAAAGGTAACGACTCCTGATGGCAAGCTGAGGCACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475762.5
ENST00000486827.1
CDS CCA 72 bp ACCCCACAGAGCAGTAGGGTGATTCTGCTACTGCAGTaGGCCTTTGAGTGTTCTGAAAGGAAATCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: TPQSSRVILLLQ*AFECSERKSGR
Trigger: TCTTCCAGATTTCCTTTCAGAACACTCAAAGGCCCACTGCAGTAGCAGAATCACCCTACTGCTCTGTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425173.5
CDS CCA 72 bp ACCGCCAGCCTCATATTTGTATGTCTCAGGATGCAGTaGTTCCCATCTGCAATGCTCTTTGCTAAGCTCGGA +
Preference number: 6 (lower is better)
Translates to: TASLIFVCLRMQ*FPSAMLFAKLG
Trigger: TCCGAGCTTAGCAAAGAGCATTGCAGATGGGAACCACTGCATCCTGAGACATACAAATATGAGGCTGGCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476741.2
CDS GCA 72 bp CACTCCTCCAAAACATTCTGGTATCTGCACATCTACTaGCAACTGCATACTTTGCTAAGCTCGGAGGGTTTC +
Preference number: 6 (lower is better)
Translates to: HSSKTFWYLHIY*QLHTLLSSEGF
Trigger: GAAACCCTCCGAGCTTAGCAAAGTATGCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTTTGGAGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584617.5
CDS TCA 72 bp GATTTGAAACAGTACTGTGCATTCCTTCTGGCTGGGTaGCTTGTACAATGTTGCCAACCTAATGCAGGAACA +
Preference number: 6 (lower is better)
Translates to: DLKQYCAFLLAG*LVQCCQPNAGT
Trigger: TGTTCCTGCATTAGGTTGGCAACATTGTACAAGTCACCCAGCCAGAAGGAATGCACAGTACTGTTTCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584804.1
CDS CCA 72 bp AAAAACTGCTTCACCTGCCACTCCTCCAAAACATTCTaGTATCTGCACATCTACTGCCAACTGCATACTTTG +
Preference number: 6 (lower is better)
Translates to: KNCFTCHSSKTF*YLHIYCQLHTL
Trigger: CAAAGTATGCAGTTGGCAGTAGATGTGCAGATACCAGAATGTTTTGGAGGAGTGGCAGGTGAAGCAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584617.5
CDS CAA 72 bp GAAAATCCTATCAAGAGCCTGAATGCTGGAATTAGATaGCCTGGGTTTGTAAATCCTGGCACCACTTACTGC +
Preference number: 6 (lower is better)
Translates to: ENPIKSLNAGIR*PGFVNPGTTYC
Trigger: GCAGTAAGTGGTGCCAGGATTTACAAACCCAGGCAATCTAATTCCAGCATTCAGGCTCTTGATAGGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476741.2
CDS CAA 90 bp TTAGGAAATGAAAATCCTATCAAGAGCCTGAATGCTGGAATTAGATaGCCTGGGTTTGTAAATCCTGGCACCACTTACTGCATGACTTTG +
Preference number: 6 (lower is better)
Translates to: LGNENPIKSLNAGIR*PGFVNPGTTYCMTL
Trigger: CAAAGTCATGCAGTAAGTGGTGCCAGGATTTACAAACCCAGGCAATCTAATTCCAGCATTCAGGCTCTTGATAGGATTTTCATTTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476741.2