RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAD51B (Homo sapiens)

Ensembl gene IDs: ENSG00000182185

Ensembl transcript IDs: ENST00000390683.7, ENST00000460526.5, ENST00000468382.5, ENST00000469165.6, ENST00000471583.5, ENST00000478014.5, ENST00000479335.5, ENST00000485181.5, ENST00000487270.5, ENST00000487861.5, ENST00000488612.5, ENST00000497460.5, ENST00000553334.1, ENST00000553595.5, ENST00000554183.1, ENST00000554244.5, ENST00000554575.2, ENST00000555907.5, ENST00000556251.1, ENST00000557045.5

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGACATTTGGTCTaGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCATTGCCCCC +
Preference number: 1 (lower is better)
Translates to: TPWWRAWAVCLGHLV*GGAPEQVTCHSIAP
Trigger: GGGGGCAATGGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 90 bp AATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGACATTTaGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCATTG +
Preference number: 1 (lower is better)
Translates to: NVLHGGGHGLCAWDI*SGEGHLSRSPVTPL
Trigger: CAATGGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 90 bp AGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTGTTTCCACGTCCCTaGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCAT +
Preference number: 1 (lower is better)
Translates to: SGWRGALVHLLFPRP*SFSSAASQGENVLH
Trigger: ATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACCAGGGACGTGGAAACAGGAGGTGAACTAAGGCACCCCGCCACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 90 bp TGGATCCTAGTTTGTCTCAGCCTCAAGAAATTCAAGCTGCCACAGTaGGTGGCGGGGTGCCTTAGTTCACCTCCTGTTTCCACGTCCCTG +
Preference number: 1 (lower is better)
Translates to: WILVCLSLKKFKLPQ*VAGCLSSPPVSTSL
Trigger: CAGGGACGTGGAAACAGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAGGCTGAGACAAACTAGGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR TCA 90 bp AGAGGTCACTGTGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTaGAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCT +
Preference number: 1 (lower is better)
Translates to: RGHCVFLRGWRGSSP*STSSCTLRSVPSKP
Trigger: AGGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACACAGTGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR TCA 90 bp CTCTCTGAATCAAGGTACTGGAGGATCAGCCGGGTATTCACACTGTaGCTCCAGGTATTTCCTAGTGCGGCTATCACACAGCTGGATCCA +
Preference number: 1 (lower is better)
Translates to: LSESRYWRISRVFTL*LQVFPSAAITQLDP
Trigger: TGGATCCAGCTGTGTGATAGCCGCACTAGGAAATACCTGGAGTCACAGTGTGAATACCCGGCTGATCCTCCAGTACCTTGATTCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR GCA 90 bp AATAAACGTTCCAGCGCTCCTAACATGCTGAGGCATTTACCAAAATaGTGTGGTTCATCTAGGCAGAGGGGAAGGCATCGGCTCAGGAGC +
Preference number: 1 (lower is better)
Translates to: NKRSSAPNMLRHLPK*CGSSRQRGRHRLRS
Trigger: GCTCCTGAGCCGATGCCTTCCCCTCTGCCTAGATGAACCACAGCATTTTGGTAAATGCCTCAGCATGTTAGGAGCGCTGGAACGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR TCA 90 bp TTGGCCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 1 (lower is better)
Translates to: LALKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR CCA 90 bp CCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTCCAGTaGCCATTGGATGAGATTGCTAAGGACAAAATTCTCATTGGAATG +
Preference number: 1 (lower is better)
Translates to: PLPPFSFLWPYTHLQ*PLDEIAKDKILIGM
Trigger: CATTCCAATGAGAATTTTGTCCTTAGCAATCTCATCCAATGGCCACTGGAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR TCA 90 bp TTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCTTGACTaGTTTCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAG +
Preference number: 1 (lower is better)
Translates to: FVHGCIISDKTGSLD*FPFGPGLLFFKAGK
Trigger: CTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGAAATCAGTCAAGGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR TCA 90 bp TTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCTTaGCTGATTTCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGG +
Preference number: 1 (lower is better)
Translates to: FICSWMHYFRQNRLP*LISLWPWSSFLQGR
Trigger: CCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGAAATCAGTCAAGGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR GCA 90 bp AAAAGCCATTGGTCATTTGATGGGCCAGACAGACTTCACAACCCTTaGTCCAAACACAAGGACAAATTTAATCTACTCAAGCTAGGAGTG +
Preference number: 1 (lower is better)
Translates to: KSHWSFDGPDRLHNP*SKHKDKFNLLKLGV
Trigger: CACTCCTAGCTTGAGTAGATTAAATTTGTCCTTGTGTTTGGAGCAAGGGTTGTGAAGTCTGTCTGGCCCATCAAATGACCAATGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR GCA 90 bp TCTTGCCAAGAACTTGTTTCTTTCTTTGAGATTGCCTTGAAGTTGTaGATCAAACTCCTTTCTGACCACAGAAGCAACAGAGTCAAGAAT +
Preference number: 1 (lower is better)
Translates to: SCQELVSFFEIALKL*IKLLSDHRSNRVKN
Trigger: ATTCTTGACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCTaGCTCCGATGGGTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: ERVARVITVKYFLMHTAVSSFKA*LRWVGL
Trigger: GAGACCCACCCATCGGAGCCAGGCTTTGAAGGAACT...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR-3UTR GCA 90 bp CCAAAATGCTGTGGTTCATCTAGGCAGAGGGGAAGGCATCGGCTCAGGAGCACTTCAAGAAATTCAAGCTaGCACAGTGGGTGGCGGGGT +
Preference number: 2 (lower is better)
Translates to: PKCCGSSRQRGRHRLRSTSRNSS*HSGWRG
Trigger: ACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGA...AGTGCTCCTGAGCCGATGCCTTCCCCTCTGCCTAGATGAACCACAGCATTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACAAAGCCTGGCTCCGATaGGTGGGTCTCATCTGTAGC +
Preference number: 2 (lower is better)
Translates to: CFPERVARVITVKYFLMHKAWLR*VGLICS
Trigger: GCTACAGATGAGACCCACCCATCGGAGCCAGGCTTT...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR CAA 90 bp CACCTGAGCAGGTCACCTGTCACTCCATTGCCCCCTTTCTCATTCTaGTGGCCCTACACACATCTCCAGTGGCCATTGGATGAGATTGCT +
Preference number: 2 (lower is better)
Translates to: HLSRSPVTPLPPFSF*WPYTHLQWPLDEIA
Trigger: AGCAATCTCATCCAATGGCCACTGGAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAGGTGACCTGCTCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CCA 90 bp TGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCATTGATCTCCAGTGGCCATTaGATGAGATTGCTAAGGACA +
Preference number: 2 (lower is better)
Translates to: WDIWSGEGHLSRSPVTPLISSGH*MRLLRT
Trigger: TGTCCTTAGCAATCTCATCCAATGGCCACTGGAGAT...CAATGGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CAA 90 bp CTCAGTGGAGAAACTGGGGCAAAATCTAGGCTACTGGATCCTAGTTaGTCTCAGCCTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: LSGETGAKSRLLDPS*SQPQEIQAATVGGG
Trigger: CCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAGGCTGAGACAAACTAGGATCCAGTAGCCTAGATTTTGCCCCAGTTTCTCCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR TCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGGTCACTGTGTTTTCCTaGGAGGGTGGCGAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: LGKDENGVHGCFGGKACLVTVFS*EGGEGH
Trigger: ATGACCCTCGCCACCCTCTCAGGAAAACACAGTGAC...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR-3UTR CCA 90 bp CTGGGGCAAAATCTAGGCTACTGGATCCTAGTTTGTCTCAGCCTCAAGAAATTCTGTGCCTGGGACATTTaGTCTGGGGAGGGGCACCTG +
Preference number: 2 (lower is better)
Translates to: LGQNLGYWILVCLSLKKFCAWDI*SGEGHL
Trigger: CAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCACA...GAATTTCTTGAGGCTGAGACAAACTAGGATCCAGTAGCCTAGATTTTGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR TCA 90 bp CACAATGTAGACATTGGGGAGACTGACTCAGGCTGCTCCCTTGTTCTGGTCATAGGTGGGTGGATCTCTTaGAGCCAGGAGTTTGAGATC +
Preference number: 2 (lower is better)
Translates to: HNVDIGETDSGCSLVLVIGGWIS*SQEFEI
Trigger: GATCTCAAACTCCTGGCTTCAAGAGATCCACCCACC...TATGACCAGAACAAGGGAGCAGCCTGAGTCAGTCTCCCCAATGTCTACATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CCA 90 bp ACCCCCATCAACTCTAGACAAAGGTCACAGTATCCCTATGGCTTCTCTTGGCCTGGACAAATCATCAGCTaGAGACACCAGGTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: TPINSRQRSQYPYGFSWPGQIIS*RHQVCL
Trigger: CAGGCAGACCTGGTGTCTCCAGCTGATGATTTGTCC...AGGCCAAGAGAAGCCATAGGGATACTGTGACCTTTGTCTAGAGTTGATGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR TCA 90 bp CTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTCCAGTTTGAAGCCAGGAGTTTaGGATCAGCTTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: LSLHCPLSHSCGPTHISSLKPGV*DQLGQH
Trigger: ATGTTGCCCAAGCTGATCTCAAACTCCTGGCTTCAA...ACTGGAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CCA 90 bp CTGGGGCAAAATCTAGGCTACTGGATCCTAGTTTGTCTCAGCCTCAAGAAATTCCTGTTTCCACGTCCCTaGTCCTTTAGCTCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LGQNLGYWILVCLSLKKFLFPRP*SFSSAA
Trigger: TGCTGCTGAGCTAAAGGACCAGGGACGTGGAAACAG...GAATTTCTTGAGGCTGAGACAAACTAGGATCCAGTAGCCTAGATTTTGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR TCA 90 bp TGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGACATTGTAAAACCATaGCATCCTTTGCTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: CKEGRSSNHSAEDPAGGNDIVKP*HPLLKG
Trigger: CCCTTTCAGCAAAGGATGTCATGGTTTTACAATGTC...ATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
3UTR CAA 90 bp TCTGGTCATAAGTCACTTAGTCCTTCCTTAAAAGCCATTGGTCATTaGATGGGCCAGACAGACTTCACAACCCTTGCTCCAAACACAAGG +
Preference number: 2 (lower is better)
Translates to: SGHKSLSPSLKAIGH*MGQTDFTTLAPNTR
Trigger: CCTTGTGTTTGGAGCAAGGGTTGTGAAGTCTGTCTGGCCCATCAAATGACCAATGGCTTTTAAGGAAGGACTAAGTGACTTATGACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR TCA 90 bp GGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAAAGGAAGCGAAATCGGCTCAGGAGCACTaGGTAAATACTCAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: GLLFFKAGKLIVTAKEAKSAQEH*VNTQWR
Trigger: TCTCCACTGAGTATTTACTCAGTGCTCCTGAGCCGA...TTTCGCTTCCTTTGCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR TCA 90 bp TCACCTTCCCTGCTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTGAACTTCATCACAGGTaGGTTCCCGATAAAGATGAA +
Preference number: 2 (lower is better)
Translates to: SPSLLGLKSLAQWFRSKSELHHR*VPDKDE
Trigger: TTCATCTTTATCGGGAACTCACCTGTGATGAAGTTC...AGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAGCAGGGAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR GCA 90 bp CCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATATACTTCAAGGAGGATaGCTCTCTTGCCAAGAACTT +
Preference number: 2 (lower is better)
Translates to: PHYVSFRFLLPSSTVLFYILQGG*LSCQEL
Trigger: AAGTTCTTGGCAAGAGAGGCATCCTCCTTGAAGTAT...ATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CCA 90 bp TGGAAGCATGTATTCCAGGGTGAATCATTTTTAAATCATCTTCCATGTTTAGGACATGGGCTGTGTGCCTaGGACATTTGGTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: WKHVFQGESFLNHLPCLGHGLCA*DIWSGE
Trigger: CTCCCCAGACCAAATGTCCCAGGCACACAGCCCATG...TCCTAAACATGGAAGATGATTTAAAAATGATTCACCCTGGAATACATGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CAA 90 bp ATCTCCAGTGGCCATTGGATGAGATTGCTAAGGACAAAATTCTCATaGGAATGGCAAAGTCTCATACTTGTAATCCTAGCGCTTTGGGAG +
Preference number: 2 (lower is better)
Translates to: ISSGHWMRLLRTKFS*EWQSLILVILALWE
Trigger: CTCCCAAAGCGCTAGGATTACAAGTATGAGACTTTGCCATTCCAATGAGAATTTTGTCCTTAGCAATCTCATCCAATGGCCACTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CAA 90 bp CATTCTTGTGGCCCTACACACATCTCCAGTGGCCATTGGATGAGATaGCTAAGGACAAAATTCTCATTGGAATGGCAAAGTCTCATACTT +
Preference number: 2 (lower is better)
Translates to: HSCGPTHISSGHWMR*LRTKFSLEWQSLIL
Trigger: AAGTATGAGACTTTGCCATTCCAATGAGAATTTTGTCCTTAGCAATCTCATCCAATGGCCACTGGAGATGTGTGTAGGGCCACAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CAA 90 bp ATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCTaGACTGATTTCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: IHLFMDALFQTKQAP*TDFPLALVFFSSRQ
Trigger: CTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGAAATCAGTCAAGGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CAA 90 bp CTCTCTTGCCAAGAACTTGTTTCTTTCTTTGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCTGACCACAGAAGCAACAGAGTCAAG +
Preference number: 2 (lower is better)
Translates to: LSCQELVSFFEIALK*CIKLLSDHRSNRVK
Trigger: CTTGACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CCA 90 bp GTGCTATATAAGTGCAAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAATTTTCCACAACCTGGTaGACCTGTAATCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: VLYKCKLLLWLLTSHGGKFSTTW*TCNLGS
Trigger: GGAACCCAGATTACAGGTCCACCAGGTTGTGGAAAA...TTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTTGCACTTATATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CCA 90 bp TATCTGGGAAAACGGGATTCTGCTATTTCAACCAGTCTTTCAGCACTAAATGCAAGTTTTTCCACAACCTaGTGGACCTGTAATCTGGGT +
Preference number: 2 (lower is better)
Translates to: YLGKRDSAISTSLSALNASFSTT*WTCNLG
Trigger: ACCCAGATTACAGGTCCACCAGGTTGTGGAAAAACT...TGCATTTAGTGCTGAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCCAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CCA 90 bp GGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAAAGGAAGCGAAAGGACAAAATTCTCATTaGAATGGCAAAGTCTCATAC +
Preference number: 2 (lower is better)
Translates to: GLLFFKAGKLIVTAKEAKGQNSH*NGKVSY
Trigger: GTATGAGACTTTGCCATTCCAATGAGAATTTTGTCC...TTTCGCTTCCTTTGCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CCA 90 bp TTATACTCAATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCTCTGCTCCATTAGAGTaGATAATTGGGAGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LYSIHLFMDALFQTKQAPSAPLE*IIGREE
Trigger: CTCTTCCCTCCCAATTATCCACTCTAATGGAGCAGA...GGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAATTGAGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CCA 90 bp TGGAAGCATGTATTCCAGGGTGAATCATTTTTAAATCATCTTCCATGTTTAGGACAAAATCTAGGCTACTaGATCCTAGTTTGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: WKHVFQGESFLNHLPCLGQNLGY*ILVCLS
Trigger: GCTGAGACAAACTAGGATCCAGTAGCCTAGATTTTG...TCCTAAACATGGAAGATGATTTAAAAATGATTCACCCTGGAATACATGCTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CCA 90 bp TCTAATCCTCCCATGTTGGTGGGTAATGTAGCCAAAATGCTCATCATTATACAAAAGACATCCATTGTATaGAATGAATTAACTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SNPPMLVGNVAKMLIIIQKTSIV*NELTSP
Trigger: GGGAGAAGTTAATTCATTCCATACAATGGATGTCTT...TTGTATAATGATGAGCATTTTGGCTACATTACCCACCAACATGGGAGGATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR CCA 72 bp TGGAGGGCATGGGCTGTGTGCCTGGGACATTTGGTCTaGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCC +
Preference number: 3 (lower is better)
Translates to: WRAWAVCLGHLV*GGAPEQVTCHS
Trigger: GGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCACACAGCCCATGCCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 72 bp CATGGTGGAGGGCATGGGCTGTGTGCCTGGGACATTTaGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTC +
Preference number: 3 (lower is better)
Translates to: HGGGHGLCAWDI*SGEGHLSRSPV
Trigger: GACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR GCA 72 bp GCTTTGGTGGAAAGGCTTGCTTGGTTCTTCTGCCTTTaGCGGGGGACCTGGGAGTGGGAAGGGGATGTTGGG +
Preference number: 3 (lower is better)
Translates to: ALVERLAWFFCL*RGTWEWEGDVG
Trigger: CCCAACATCCCCTTCCCACTCCCAGGTCCCCCGGCAAAGGCAGAAGAACCAAGCAAGCCTTTCCACCAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR-3UTR CAA 90 bp TGCCTGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCCATCTCCAGTGGCCATaGGATGAGATTGCTAAGGAC +
Preference number: 3 (lower is better)
Translates to: CLGHLVWGGAPEQVTCHSHLQWP*DEIAKD
Trigger: GTCCTTAGCAATCTCATCCAATGGCCACTGGAGATG...GGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 72 bp AAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATaGGCTGTGTGCCTGGGACATTTGGTCTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: KPGRKCTPWWRA*AVCLGHLVWGG
Trigger: CCCTCCCCAGACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 72 bp CTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTaGAGGGCATGGGCTGTGTGCCTGGGACATTTGGTC +
Preference number: 3 (lower is better)
Translates to: LSSKPGRKCTPW*RAWAVCLGHLV
Trigger: GACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 72 bp CGGGGTGCCTTAGTTCACCTCCTGTTTCCACGTCCCTaGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAAT +
Preference number: 3 (lower is better)
Translates to: RGALVHLLFPRP*SFSSAASQGEN
Trigger: ATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACCAGGGACGTGGAAACAGGAGGTGAACTAAGGCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 72 bp GTCTCAGCCTCAAGAAATTCAAGCTGCCACAGTGGGTaGCGGGGTGCCTTAGTTCACCTCCTGTTTCCACGT +
Preference number: 3 (lower is better)
Translates to: VSASRNSSCHSG*RGALVHLLFPR
Trigger: ACGTGGAAACAGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAGGCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR TCA 72 bp TGTGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTaGAGTACTTCCTCATGCACACTGCGGTCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: CVFLRGWRGSSP*STSSCTLRSVP
Trigger: AGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR GCA 72 bp TCCAGCGCTCCTAACATGCTGAGGCATTTACCAAAATaGTGTGGTTCATCTAGGCAGAGGGGAAGGCATCGG +
Preference number: 3 (lower is better)
Translates to: SSAPNMLRHLPK*CGSSRQRGRHR
Trigger: CCGATGCCTTCCCCTCTGCCTAGATGAACCACAGCATTTTGGTAAATGCCTCAGCATGTTAGGAGCGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR TCA 72 bp TCAAGGTACTGGAGGATCAGCCGGGTATTCACACTGTaGCTCCAGGTATTTCCTAGTGCGGCTATCACACAG +
Preference number: 3 (lower is better)
Translates to: SRYWRISRVFTL*LQVFPSAAITQ
Trigger: CTGTGTGATAGCCGCACTAGGAAATACCTGGAGTCACAGTGTGAATACCCGGCTGATCCTCCAGTACCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR TCA 72 bp AAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAG +
Preference number: 3 (lower is better)
Translates to: KNQAFLLDGVDK*GEGSQRGLGNK
Trigger: CTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CAA 90 bp GCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGAGGACAAAATTCTCATaGGAATGGCAAAGTCTCATA +
Preference number: 3 (lower is better)
Translates to: ASQGENVLHGGGHGLCAWRTKFS*EWQSLI
Trigger: TATGAGACTTTGCCATTCCAATGAGAATTTTGTCCT...CCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CAA 90 bp CCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTCCCTATGGCTTCTCTaGGCCTTGAAGAACCAGGCC +
Preference number: 3 (lower is better)
Translates to: PHYVSFRFLLPSSTVLFYSLWLL*ALKNQA
Trigger: GGCCTGGTTCTTCAAGGCCAAGAGAAGCCATAGGGA...ATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR GCA 72 bp AGAGTTCTTGGAAAGGATGAGAATGGGGTTCATGGCTaGTTTGGTGGAAAGGCTTGCTTGGTTCTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: RVLGKDENGVHG*FGGKACLVLLP
Trigger: AGGCAGAAGAACCAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR-3UTR CAA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCTCTCTTGCCAAGAACTaGTTTCTTTCTTTGAGATTG +
Preference number: 3 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGSLAKN*FLSLRL
Trigger: CAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGAGA...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CAA 90 bp GGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAAAGGAAGCGAAACCCCCTTTCTCATTCTaGTGGCCCTACACACATCTC +
Preference number: 3 (lower is better)
Translates to: GLLFFKAGKLIVTAKEAKPPFSF*WPYTHL
Trigger: GAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGG...TTTCGCTTCCTTTGCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR TCA 72 bp GGGAAGAGAATAAACGTTCCAGCGCTCCTAACATGCTaGGGCATTTACCAAAATGCTGTGGTTCATCTAGGC +
Preference number: 3 (lower is better)
Translates to: GKRINVPALLTC*GIYQNAVVHLG
Trigger: GCCTAGATGAACCACAGCATTTTGGTAAATGCCTCAGCATGTTAGGAGCGCTGGAACGTTTATTCTCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR-3UTR CAA 90 bp TTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCACACCGGAGCCAGAGGGGACTaGGCAATAAGAATCTGTCTT +
Preference number: 3 (lower is better)
Translates to: FRFLLPSSTVLFYFTNHTGARGD*AIRICL
Trigger: AAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCC...GGTGTGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CAA 90 bp AAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACAGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: KLLLWLLTSHGGKALSPTEIALK*CIKLLS
Trigger: AGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTC...TGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR TCA 72 bp GGATGCATTATTTCAGACAAAACAGGCTCCCTTGACTaGTTTCCCTTTGGCCCTGGTCTTCTTTTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: GCIISDKTGSLD*FPFGPGLLFFK
Trigger: CTTGAAGAAAAGAAGACCAGGGCCAAAGGGAAATCAGTCAAGGGAGCCTGTTTTGTCTGAAATAATGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR GCA 72 bp GGATTCTGCTATTTCAACCAGTCTTTCAGCACTAAATaGAGACTCTGTGTCAATGTACACCACAGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: GFCYFNQSFSTK*RLCVNVHHSSF
Trigger: GAAGGAGCTGTGGTGTACATTGACACAGAGTCTGCATTTAGTGCTGAAAGACTGGTTGAAATAGCAGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR TCA 72 bp TCATGGATGCATTATTTCAGACAAAACAGGCTCCCTTaGCTGATTTCCCTTTGGCCCTGGTCTTCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: SWMHYFRQNRLP*LISLWPWSSFL
Trigger: AAGAAAAGAAGACCAGGGCCAAAGGGAAATCAGTCAAGGGAGCCTGTTTTGTCTGAAATAATGCATCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CCA 72 bp GCTCATCATTATACAAAACTGAGTTTTTCCACAACCTaGTGGACCTGTAATCTGGGTTCCCAGGAGAGAATT +
Preference number: 3 (lower is better)
Translates to: AHHYTKLSFSTT*WTCNLGSQERI
Trigger: AATTCTCTCCTGGGAACCCAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR CCA 72 bp CATCATTATACAAAACTGAGTTTTTCCACAACCTGGTaGACCTGTAATCTGGGTTCCCAGGAGAGAATTAAG +
Preference number: 3 (lower is better)
Translates to: HHYTKLSFSTTW*TCNLGSQERIK
Trigger: CTTAATTCTCTCCTGGGAACCCAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR-3UTR CAA 90 bp TTATACTCAATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCGAGTTTGAGATCAGCTaGGGCAACATAATGAGACCC +
Preference number: 3 (lower is better)
Translates to: LYSIHLFMDALFQTKQAPEFEIS*GNIMRP
Trigger: GGGTCTCATTATGTTGCCCAAGCTGATCTCAAACTC...GGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAATTGAGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR GCA 72 bp GAACTTGTTTCTTTCTTTGAGATTGCCTTGAAGTTGTaGATCAAACTCCTTTCTGACCACAGAAGCAACAGA +
Preference number: 3 (lower is better)
Translates to: ELVSFFEIALKL*IKLLSDHRSNR
Trigger: TCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAAAGAAACAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
3UTR CCA 72 bp GTTGTGATTCATCAATTTCACTTCATGACCCACCAATaGGTTGCGACAGTTTTCAAAGTCTTGAATCAAGGT +
Preference number: 3 (lower is better)
Translates to: VVIHQFHFMTHQ*VATVFKVLNQG
Trigger: ACCTTGATTCAAGACTTTGAAAACTGTCGCAACCCATTGGTGGGTCATGAAGTGAAATTGATGAATCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554575.2
3UTR TCA 72 bp CCAAAGATTCAATCCTTTGTAGAACTTCATCACAGGTaGGTTCCCGATAAAGATGAACTTTACTACTTGTCA +
Preference number: 3 (lower is better)
Translates to: PKIQSFVELHHR*VPDKDELYYLS
Trigger: TGACAAGTAGTAAAGTTCATCTTTATCGGGAACTCACCTGTGATGAAGTTCTACAAAGGATTGAATCTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR TCA 90 bp GCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGACACCAGGTCTGCCTaGGAAGCCAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: ASQGENVLHGGGHGLCAWDTRSA*EARAPL
Trigger: GAGTGGAGCCCTGGCTTCTCAGGCAGACCTGGTGTC...CCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp TGCCTGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCCAGTGGGTGGCGGGGTaGCTTAGTTCACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CLGHLVWGGAPEQVTCHSQWVAG*LSSPPV
Trigger: AACAGGAGGTGAACTAAGGCACCCCGCCACCCACTG...GGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TGCCTGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCACAGGCTCCCTTGACTaGTTTCCCTTTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: CLGHLVWGGAPEQVTCHSTGSLD*FPFGPG
Trigger: ACCAGGGCCAAAGGGAAATCAGTCAAGGGAGCCTGT...GGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TGCCTGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCAGACATTGGGGAGACTaGCTCAGGCTGCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: CLGHLVWGGAPEQVTCHSRHWGD*LRLLPC
Trigger: ACAAGGGAGCAGCCTGAGTCAGTCTCCCCAATGTCT...GGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGAGCTGCCACAGTGGGTaGCGGGGTGCCTTAGTTCAC +
Preference number: 4 (lower is better)
Translates to: ASQGENVLHGGGHGLCAWSCHSG*RGALVH
Trigger: GTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCT...CCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTGGAGACACCAGGTCTaGCTGAGAAGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VARVITVKYFLMHTAVSSWRHQV*LRSQGS
Trigger: GGAGCCCTGGCTTCTCAGGCAGACCTGGTGTCTCCA...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGCCGTTTGCATCTTTaGGGCACAGGCCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ERVARVITVKYFLMHTAVSRLHL*GTGPAD
Trigger: GTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCT...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACGACACCAGGTCTGCCTaGGAAGCCAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHDTRSA*EARAPL
Trigger: GAGTGGAGCCCTGGCTTCTCAGGCAGACCTGGTGTC...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp AATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTGTTTCCATGGAGACACCAGGTCTaGCTGAGAAGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NSSCHSGWRGALVHLLFPWRHQV*LRSQGS
Trigger: GGAGCCCTGGCTTCTCAGGCAGACCTGGTGTCTCCA...TGGAAACAGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCCCTGGCTCCGATGGGTaGGTCTCATCTGTAGCAATC +
Preference number: 4 (lower is better)
Translates to: ERVARVITVKYFLMHTAVPGSDG*VSSVAI
Trigger: GATTGCTACAGATGAGACCCACCCATCGGAGCCAGG...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCGTGGGAAGGGGATGTTaGGGGAGAGGTCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: ERVARVITVKYFLMHTAVVGRGC*GRGHCV
Trigger: AACACAGTGACCTCTCCCCCAACATCCCCTTCCCAC...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp ATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACACCAGGTCTGCCTaGGAAGCCAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: IMAVDIPWRQSPQPYTSRDTRSA*EARAPL
Trigger: GAGTGGAGCCCTGGCTTCTCAGGCAGACCTGGTGTC...TCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp GCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ASQGENVLHGGGHGLCAWDGVDK*GEGSQR
Trigger: CCTCTGGCTCCCTTCACCTCATTTGTCTACACCATC...CCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCAAAGCCTGGCTCCGATaGGTGGGTCTCATCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VARVITVKYFLMHTAVSSKAWLR*VGLICS
Trigger: GCTACAGATGAGACCCACCCATCGGAGCCAGGCTTT...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCAGTTCCTTCAAAGCCTaGCTCCGATGGGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VARVITVKYFLMHTAVSSSSFKA*LRWVGL
Trigger: GAGACCCACCCATCGGAGCCAGGCTTTGAAGGAACT...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCGTGGAAAGGCTTGCTTaGTTCTTCTGCCTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: ERVARVITVKYFLMHTAVVERLA*FFCLCR
Trigger: CCGGCAAAGGCAGAAGAACCAAGCAAGCCTTTCCAC...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp GCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGAGACTGACTCAGGCTaGTCCCTTGTTCTGGTCATA +
Preference number: 4 (lower is better)
Translates to: ASQGENVLHGGGHGLCAWETDSG*SLVLVI
Trigger: TATGACCAGAACAAGGGAGCAGCCTGAGTCAGTCTC...CCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCCGGCTATCACACAGCTaGATCCAGAAGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VARVITVKYFLMHTAVSSRLSHS*IQKCLQ
Trigger: CTGAAGGCACTTCTGGATCCAGCTGTGTGATAGCCG...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp GTCACCTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTTGTGCCTGGGACATTTaGTCTGGGGAGGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VTCHSIAPFLILVALHTSCAWDI*SGEGHL
Trigger: CAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCACA...AGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp CTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTTGTAGACAAATGAGGTaGAGGGAGCCAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LKKFKLPQWVAGCLSSPPCRQMR*REPEGT
Trigger: AGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACA...AGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp GCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGCGCTCCTAACATGCTaGGGCATTTACCAAAATGCT +
Preference number: 4 (lower is better)
Translates to: ASQGENVLHGGGHGLCAWALLTC*GIYQNA
Trigger: AGCATTTTGGTAAATGCCTCAGCATGTTAGGAGCGC...CCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp GGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCCAAAACAGGCTCCCTTaGCTGATTTCCCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPLAQQQAREKMYSMVEGQNRLP*LISLWP
Trigger: GGGCCAAAGGGAAATCAGTCAAGGGAGCCTGTTTTG...GCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp CCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGAGTTCTTGGAAAGGATaGGAATGGGGTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PERVARVITVKYFLMHTASSWKG*EWGSWL
Trigger: CAGCCATGAACCCCATTCTCATCCTTTCCAAGAACT...CGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp CTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTCCAGTAGGGCATGGGCTGTGTaGCTGGGACATTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLHCPLSHSCGPTHISSRAWAV*LGHLVW
Trigger: CCAGACCAAATGTCCCAGGCACACAGCCCATGCCCT...ACTGGAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp CTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTTCAAGAAATTCAAGCTaGCACAGTGGGTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LKKFKLPQWVAGCLSSPPSRNSS*HSGWRG
Trigger: ACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGA...AGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGTGGTTCTTCTGCCTTTaGCGGGGGACCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLWFFCL*RGTWEW
Trigger: CCACTCCCAGGTCCCCCGGCAAAGGCAGAAGAACCA...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp GTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCCTTGCTTGGTTCTTCTaGCTTTGCCGGGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VITVKYFLMHTAVSSFKALAWFF*LCRGTW
Trigger: CCAGGTCCCCCGGCAAAGGCAGAAGAACCAAGCAAG...GGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp ATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAAGCCGTTTGCATCTTTaGGGCACAGGCCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: IMAVDIPWRQSPQPYTSRSRLHL*GTGPAD
Trigger: GTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCT...TCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp CTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTCCAGTAGCCGTTTGCATCTTTaGGGCACAGGCCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSLHCPLSHSCGPTHISSSRLHL*GTGPAD
Trigger: GTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCT...ACTGGAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCGGACAAATCATCAGCTaGAGACACCAGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGGQIIS*RHQVCL
Trigger: CAGGCAGACCTGGTGTCTCCAGCTGATGATTTGTCC...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp CTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTCTGTTTCCACGTCCCTaGTCCTTTAGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LKKFKLPQWVAGCLSSPPLFPRP*SFSSAA
Trigger: TGCTGCTGAGCTAAAGGACCAGGGACGTGGAAACAG...AGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGCTTTGCCGGGGGACCTaGGAGTGGGAAGGGGATGTT +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLLCRGT*EWEGDV
Trigger: AACATCCCCTTCCCACTCCCAGGTCCCCCGGCAAAG...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCGGTTCATGGCTGCTTTaGTGGAAAGGCTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VARVITVKYFLMHTAVSSGSWLL*WKGLLG
Trigger: ACCAAGCAAGCCTTTCCACCAAAGCAGCCATGAACC...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp TGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCATTGCATCAAACTCCTTTCTaGCCACAGAAGCAACAGAGT +
Preference number: 4 (lower is better)
Translates to: WDIWSGEGHLSRSPVTPLHQTPF*PQKQQS
Trigger: ACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATG...CAATGGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHDGVDK*GEGSQR
Trigger: CCTCTGGCTCCCTTCACCTCATTTGTCTACACCATC...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp GGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCTCGGCTCAGGAGCACTaGGTAAATACTCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GPLAQQQAREKMYSMVEGSAQEH*VNTQWR
Trigger: TCTCCACTGAGTATTTACTCAGTGCTCCTGAGCCGA...GCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp GTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCGTCACTGTGTTTTCCTaGGAGGGTGGCGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VITVKYFLMHTAVSSFKAVTVFS*EGGEGH
Trigger: ATGACCCTCGCCACCCTCTCAGGAAAACACAGTGAC...GGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp CCAAAATGCTGTGGTTCATCTAGGCAGAGGGGAAGGCATCGGCTCAGGAGCACTTACCCATGCCGGGTCTaGAGCATCCAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PKCCGSSRQRGRHRLRSTYPCRV*SIQLSS
Trigger: ACTTGAAAGTTGGATGCTGCAGACCCGGCATGGGTA...AGTGCTCCTGAGCCGATGCCTTCCCCTCTGCCTAGATGAACCACAGCATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp CATGGGCTGTGTGCCTGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCAATTGCCTTGAAGTTGTaGATCAAACTCCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: HGLCAWDIWSGEGHLSRSIALKL*IKLLSD
Trigger: GTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAAT...TGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCACACAGCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp TCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATAGCCGTTTGCATCTTTaGGGCACAGGCCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SNHSAEDPAGGNEISRGDSRLHL*GTGPAD
Trigger: GTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCT...ATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCTTTTCCACAACCTGGTaGACCTGTAATCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ERVARVITVKYFLMHTAVFSTTW*TCNLCE
Trigger: CTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAA...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp GCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGGGACAAATCATCAGCTaGAGACACCAGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ALITLQKTQLEEMRSHVGGQIIS*RHQVCL
Trigger: CAGGCAGACCTGGTGTCTCCAGCTGATGATTTGTCC...CCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCCCATGGTGGAGGGCATaGGCTGTGTGCCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSPWWRA*AVCLGH
Trigger: ATGTCCCAGGCACACAGCCCATGCCCTCCACCATGG...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATTGTAGACAAATGAGGTaGAGGGAGCCAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: CKEGRSSNHSAEDPAGGNCRQMR*REPEGT
Trigger: AGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACA...ATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp GTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCTGTAGACAAATGAGGTaGAGGGAGCCAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: VITVKYFLMHTAVSSFKACRQMR*REPEGT
Trigger: AGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACA...GGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp CTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATCGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LITLQKTQLEEMRSHVGIDGVDK*GEGSQR
Trigger: CCTCTGGCTCCCTTCACCTCATTTGTCTACACCATC...GATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp GAGGAAATGAGATCTCACGTGGGGATCAAGGGTTGTAGGAGTGGGAGGAAGATGAGAAGAGAGGACAGTTaGGTGCATCTGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EEMRSHVGIKGCRSGRKMRREDS*VHLWRA
Trigger: TGCCCTCCACAGATGCACTCAACTGTCCTCTCTTCT...CATCTTCCTCCCACTCCTACAACCCTTGATCCCCACGTGAGATCTCATTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp TCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATCCCAGCTGGAGGAAATaGGATCTCACGTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: SNHSAEDPAGGNEISRGDPSWRK*DLTWGS
Trigger: TGATCCCCACGTGAGATCTCATTTCCTCCAGCTGGG...ATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAGCTGCTCAGGAGGCTaGGGTGGGAGGATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSSCSGG*GGRISG
Trigger: TCCAGAAATCCTCCCACCTCAGCCTCCTGAGCAGCT...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp GTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCCGAGGGTCATCACCGTaGAGTACTTCCTCATGCACA +
Preference number: 4 (lower is better)
Translates to: VITVKYFLMHTAVSSFKARGSSP*STSSCT
Trigger: TGTGCATGAGGAAGTACTTCACGGTGATGACCCTCG...GGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp CCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTGGAGACACCAGGTCTaGCTGAGAAGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PHYVSFRFLLPSSTVLFYWRHQV*LRSQGS
Trigger: GGAGCCCTGGCTTCTCAGGCAGACCTGGTGTCTCCA...ATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp TCACCTTCCCTGCTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTTGGAGACACCAGGTCTaGCTGAGAAGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSLLGLKSLAQWFRSKSWRHQV*LRSQGS
Trigger: GGAGCCCTGGCTTCTCAGGCAGACCTGGTGTCTCCA...AGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAGCAGGGAAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp TGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGAGGACAGTTGAGTaGATCTGTGGAGGGCACATG +
Preference number: 4 (lower is better)
Translates to: CKEGRSSNHSAEDPAGGNERTVE*ICGGHM
Trigger: CATGTGCCCTCCACAGATGCACTCAACTGTCCTCTC...ATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR GCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACAATGGGGTTCATGGCTaGTTTGGTGGAAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHNGVHG*FGGKAC
Trigger: GCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATT...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCTCTGAATCAAGGTACTaGAGGATCAGCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGSESRY*RISRVF
Trigger: GAATACCCGGCTGATCCTCCAGTACCTTGATTCAGA...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp GGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCTCTGAATCAAGGTACTaGAGGATCAGCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: GPLAQQQAREKMYSMVEGSESRY*RISRVF
Trigger: GAATACCCGGCTGATCCTCCAGTACCTTGATTCAGA...GCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCGTCACAGTATCCCTATaGCTTCTCTTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGVTVSL*LLLALK
Trigger: CTTCAAGGCCAAGAGAAGCCATAGGGATACTGTGAC...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp CCTTCCCTGCTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTGTTGCTGTTGACATCCCATaGCGGCAAAGCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSLLGLKSLAQWFRSKSVAVDIP*RQSPQP
Trigger: GGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGC...AACAGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAGCAGGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp AAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACAGCTGTTGACATCCCATaGCGGCAAAGCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: KLLLWLLTSHGGKALSPTAVDIP*RQSPQP
Trigger: GGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGC...TGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp AGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTGTTTCCACGTCCCTGGTCCTTTCAAAATCTAGGCTACTaGATCCTAGTTTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SGWRGALVHLLFPRPWSFQNLGY*ILVCLS
Trigger: GCTGAGACAAACTAGGATCCAGTAGCCTAGATTTTG...AAAGGACCAGGGACGTGGAAACAGGAGGTGAACTAAGGCACCCCGCCACCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCACACCGACACCAGGTCTGCCTaGGAAGCCAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: FRFLLPSSTVLFYFTNHTDTRSA*EARAPL
Trigger: GAGTGGAGCCCTGGCTTCTCAGGCAGACCTGGTGTC...GGTGTGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTGGCTTCTCTTGGCCTTaGAGAACCAGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LIPIMSASVSFFQAVRSCGFSWP*RTRPSS
Trigger: GGAGGAAGGCCTGGTTCTTCAAGGCCAAGAGAAGCC...ACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp AGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGACATTTGGTCAAGCCATTGGTCATTTaGTGGGCCAGACAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RKCTPWWRAWAVCLGHLVKPLVI*WARQTS
Trigger: TGAAGTCTGTCTGGCCCATCAAATGACCAATGGCTT...GACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACATGTGCCAAAATTCTTaGAGAACCAGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHMCQNS*RTRPSS
Trigger: GGAGGAAGGCCTGGTTCTTCAAGAATTTTGGCACAT...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp CTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATCTACCCATGCCGGGTCTaGAGCATCCAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LITLQKTQLEEMRSHVGIYPCRV*SIQLSS
Trigger: ACTTGAAAGTTGGATGCTGCAGACCCGGCATGGGTA...GATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR GCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCATTGCCTTGAAGTTGTaGATCAAACTCCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ERVARVITVKYFLMHTAVIALKL*IKLLSD
Trigger: GTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAAT...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCTTTTCCACAACCTGGTaGACCTGTAATCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGFSTTW*TCNLCE
Trigger: CTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAA...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471583.5
CDS-3UTR CCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGGGACAAATCATCAGCTaGAGACACCAGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLGQIIS*RHQVCL
Trigger: CAGGCAGACCTGGTGTCTCCAGCTGATGATTTGTCC...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp CACAATGTAGACATTGGGGAGACTGACTCAGGCTGCTCCCTTGTTCTGGTCATACGGCTATCACACAGCTaGATCCAGAAGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: HNVDIGETDSGCSLVLVIRLSHS*IQKCLQ
Trigger: CTGAAGGCACTTCTGGATCCAGCTGTGTGATAGCCG...TATGACCAGAACAAGGGAGCAGCCTGAGTCAGTCTCCCCAATGTCTACATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp CTCAGCCTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCAATCTCCAGTGGCCATTaGATGAGATTGCTAAGGACA +
Preference number: 4 (lower is better)
Translates to: LSLKKFKLPQWVAGCLSSISSGH*MRLLRT
Trigger: TGTCCTTAGCAATCTCATCCAATGGCCACTGGAGAT...TGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCGAACTTCATCACAGGTaGGTTCCCGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGELHHR*VPDKDE
Trigger: TTCATCTTTATCGGGAACTCACCTGTGATGAAGTTC...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp CTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTAATCTGTCTTCTCTCTaGATCAAGGTACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LKKFKLPQWVAGCLSSPPNLSSL*IKVLED
Trigger: ATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATT...AGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCTCTTTCAGCACTAAATaGAGACTCTGTGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: ERVARVITVKYFLMHTAVSFSTK*RLCVNV
Trigger: TACATTGACACAGAGTCTGCATTTAGTGCTGAAAGA...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGCTTCCTCATGCACACTaGGGTCAGTTCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLLPHAH*GQFLQS
Trigger: GCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAG...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACTTTGGTGGAAAGGCTTaGTTGGTTCTTCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHFGGKA*LVLLPL
Trigger: CAAAGGCAGAAGAACCAAGCAAGCCTTTCCACCAAA...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp CTCAGCCTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCAAGTTTTTCCACAACCTaGTGGACCTGTAATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSLKKFKLPQWVAGCLSSSFSTT*WTCNLC
Trigger: ACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACT...TGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAGGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCGGACAAATCATCAGCTaGAGACACCAGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSGQIIS*RHQVCL
Trigger: CAGGCAGACCTGGTGTCTCCAGCTGATGATTTGTCC...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GAGGAAATGAGATCTCACGTGGGGATCAAGGGTTGTAGGAGTGGGAGGAAGATGTCTGAATCAAGGTACTaGAGGATCAGCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: EEMRSHVGIKGCRSGRKMSESRY*RISRVF
Trigger: GAATACCCGGCTGATCCTCCAGTACCTTGATTCAGA...CATCTTCCTCCCACTCCTACAACCCTTGATCCCCACGTGAGATCTCATTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp AGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGACATTTGGTCTCTGCTCCATTAGAGTaGATAATTGGGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RKCTPWWRAWAVCLGHLVSAPLE*IIGREE
Trigger: CTCTTCCCTCCCAATTATCCACTCTAATGGAGCAGA...GACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCCTGCCATTAAAAGTGTaGCATCTGCCAAATGAAAAG +
Preference number: 4 (lower is better)
Translates to: VARVITVKYFLMHTAVSSLPLKV*HLPNEK
Trigger: CTTTTCATTTGGCAGATGCCACACTTTTAATGGCAG...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp CGTCCCTGGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTGAACTTCATCACAGGTaGGTTCCCGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: RPWSFSSAASQGENVLHGELHHR*VPDKDE
Trigger: TTCATCTTTATCGGGAACTCACCTGTGATGAAGTTC...ACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACCAGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACGAACTTCATCACAGGTaGGTTCCCGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHELHHR*VPDKDE
Trigger: TTCATCTTTATCGGGAACTCACCTGTGATGAAGTTC...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp ATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: INPHYVSFRFLLPSSTVLDGVDK*GEGSQR
Trigger: CCTCTGGCTCCCTTCACCTCATTTGTCTACACCATC...CAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp AAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACAGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KLLLWLLTSHGGKALSPTDGVDK*GEGSQR
Trigger: CCTCTGGCTCCCTTCACCTCATTTGTCTACACCATC...TGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp GGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCCAAGATAACTGGGATTaGAAACTCCTCAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: GPLAQQQAREKMYSMVEGQDNWD*KLLSQI
Trigger: TATTTGGCTGAGGAGTTTTCAATCCCAGTTATCTTG...GCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCTTCTTCAGATGGGTTGTAATCTaGTTCGTCAAGATAACTGGG +
Preference number: 4 (lower is better)
Translates to: WRQSPQPYTSRDLNKGFFRWVVI*FVKITG
Trigger: CCCAGTTATCTTGACGAATCAGATTACAACCCATCT...GAAGAAGCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp CGTCCCTGGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTAGATGGGTTGTAATCTaGTTCGTCAAGATAACTGGG +
Preference number: 4 (lower is better)
Translates to: RPWSFSSAASQGENVLHGRWVVI*FVKITG
Trigger: CCCAGTTATCTTGACGAATCAGATTACAACCCATCT...ACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACCAGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp GCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATCAGCAGACCTTTGTaGTTTTATCCCATAAGCCGT +
Preference number: 4 (lower is better)
Translates to: ALITLQKTQLEEMRSHVGISRPL*FYPISR
Trigger: ACGGCTTATGGGATAAAAGCACAAAGGTCTGCTGAT...CCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp GCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCACAAGCCGTTTGCATCTTTaGGGCACAGGCCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ASVSFFQAVRSCFISQITSRLHL*GTGPAD
Trigger: GTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCT...TGTGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp GTCACCTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTTTTTCCACAACCTGGTaGACCTGTAATCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VTCHSIAPFLILVALHTSFSTTW*TCNLCE
Trigger: CTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAA...AGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGTCTGAATCAAGGTACTaGAGGATCAGCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLSESRY*RISRVF
Trigger: GAATACCCGGCTGATCCTCCAGTACCTTGATTCAGA...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp CTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATCGGTGAAAAACTAGGCTaGGTTACACTGGATGCTCAT +
Preference number: 4 (lower is better)
Translates to: LITLQKTQLEEMRSHVGIGEKLG*VTLDAH
Trigger: ATGAGCATCCAGTGTAACCCAGCCTAGTTTTTCACC...GATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAGAAAATGTACTCCATaGTGGAGGGCATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSRKCTP*WRAWAV
Trigger: CACAGCCCATGCCCTCCACCATGGAGTACATTTTCT...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAAAGGAAGCGAAATTCAAGCTGCCACAGTaGGTGGCGGGGTGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: GLLFFKAGKLIVTAKEAKFKLPQ*VAGCLS
Trigger: ACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAA...TTTCGCTTCCTTTGCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp CTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTCCAGTACCTGTAGAAGCAACTaGAAGCATGTATTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSLHCPLSHSCGPTHISSTCRSN*KHVFQG
Trigger: ACCCTGGAATACATGCTTCCAGTTGCTTCTACAGGT...ACTGGAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGCCCCAAACCCCTATCTaGTATAGCAGAGAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLPQTPI*YSREFL
Trigger: CAAGAACTCTCTGCTATACCAGATAGGGGTTTGGGG...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR CAA 72 bp TTCTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTaGGTGGAAAGGCTTGCTTGGTTCTTCTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLERMRMGFMAA*VERLAWFFCLC
Trigger: GCAAAGGCAGAAGAACCAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGCATCAAACTCCTTTCTaGCCACAGAAGCAACAGAGT +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLHQTPF*PQKQQS
Trigger: ACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATG...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp AGAGAAGAAGAACTTTTTCACTGGAGACATTGTAAAACCATGACATCCTTTGCTGACACCAGGTCTGCCTaGGAAGCCAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: REEELFHWRHCKTMTSFADTRSA*EARAPL
Trigger: GAGTGGAGCCCTGGCTTCTCAGGCAGACCTGGTGTC...AGCAAAGGATGTCATGGTTTTACAATGTCTCCAGTGAAAAAGTTCTTCTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp TGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATAATCTGTCTTCTCTCTaGATCAAGGTACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CKEGRSSNHSAEDPAGGNNLSSL*IKVLED
Trigger: ATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATT...ATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACCAAGATAACTGGGATTaGAAACTCCTCAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHQDNWD*KLLSQI
Trigger: TATTTGGCTGAGGAGTTTTCAATCCCAGTTATCTTG...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp GTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCAGATGGGTTGTAATCTaGTTCGTCAAGATAACTGGG +
Preference number: 4 (lower is better)
Translates to: VITVKYFLMHTAVSSFKARWVVI*FVKITG
Trigger: CCCAGTTATCTTGACGAATCAGATTACAACCCATCT...GGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp ACCCCCATCAACTCTAGACAAAGGTCACAGTATCCCTATGGCTTCTCTTGGCCTTTTGAGGTGCCTGGTTaGAAGGTGCTATATAAGTGC +
Preference number: 4 (lower is better)
Translates to: TPINSRQRSQYPYGFSWPFEVPG*KVLYKC
Trigger: GCACTTATATAGCACCTTTCAACCAGGCACCTCAAA...AGGCCAAGAGAAGCCATAGGGATACTGTGACCTTTGTCTAGAGTTGATGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR TCA 90 bp CTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATCGACATTGTAAAACCATaGCATCCTTTGCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LITLQKTQLEEMRSHVGIDIVKP*HPLLKG
Trigger: CCCTTTCAGCAAAGGATGTCATGGTTTTACAATGTC...GATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCCAAAATGTTGTCTCTTaGAGAACCAGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSQNVVS*RTRPSS
Trigger: GGAGGAAGGCCTGGTTCTTCAAGAGACAACATTTTG...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp TCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATACCCATGCCGGGTCTaGAGCATCCAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SPLCQLPFPSSKQYGPVLYPCRV*SIQLSS
Trigger: ACTTGAAAGTTGGATGCTGCAGACCCGGCATGGGTA...TAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp CCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATCTCGTTTTAGTTTCTTaGTACCCATGCCGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PHYVSFRFLLPSSTVLFYLVLVS*YPCRVC
Trigger: GCAGACCCGGCATGGGTAGCAAGAAACTAAAACGAG...ATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp ATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAATCAGCAGACCTTTGTaGTTTTATCCCATAAGCCGT +
Preference number: 4 (lower is better)
Translates to: IMAVDIPWRQSPQPYTSRISRPL*FYPISR
Trigger: ACGGCTTATGGGATAAAAGCACAAAGGTCTGCTGAT...TCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp CTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTCCAGTATCAGCAGACCTTTGTaGTTTTATCCCATAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSLHCPLSHSCGPTHISSISRPL*FYPISR
Trigger: ACGGCTTATGGGATAAAAGCACAAAGGTCTGCTGAT...ACTGGAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp GTCACCTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTGGGAAAACGGGATTCTaGTATTTCAACCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VTCHSIAPFLILVALHTSGKTGF*YFNQSF
Trigger: GAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCC...AGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAGGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp GAGGAAATGAGATCTCACGTGGGGATCAAGGGTTGTAGGAGTGGGAGGAAGATGGGGAAAACGGGATTCTaGTATTTCAACCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EEMRSHVGIKGCRSGRKMGKTGF*YFNQSF
Trigger: GAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCC...CATCTTCCTCCCACTCCTACAACCCTTGATCCCCACGTGAGATCTCATTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR GCA 90 bp GTCACCTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTAGACTTCACAACCCTTaGTCCAAACACAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: VTCHSIAPFLILVALHTSRLHNP*SKHKDK
Trigger: TTTGTCCTTGTGTTTGGAGCAAGGGTTGTGAAGTCT...AGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAGGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp TCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATTTTTCCACAACCTGGTaGACCTGTAATCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SNHSAEDPAGGNEISRGDFSTTW*TCNLCE
Trigger: CTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAA...ATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp GTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCAGTTTTTCCACAACCTaGTGGACCTGTAATCTCTGT +
Preference number: 4 (lower is better)
Translates to: VITVKYFLMHTAVSSFKASFSTT*WTCNLC
Trigger: ACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACT...GGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CCA 90 bp CTTCAGCAATCCTTTTACAATAGAGATGCTGCAAGGAGGGCAGAAGCTCTAATCCGGCTATCACACAGCTaGATCCAGAAGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LQQSFYNRDAARRAEALIRLSHS*IQKCLQ
Trigger: CTGAAGGCACTTCTGGATCCAGCTGTGTGATAGCCG...GATTAGAGCTTCTGCCCTCCTTGCAGCATCTCTATTGTAAAAGGATTGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp TCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATGAACTTCATCACAGGTaGGTTCCCGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: SNHSAEDPAGGNEISRGDELHHR*VPDKDE
Trigger: TTCATCTTTATCGGGAACTCACCTGTGATGAAGTTC...ATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGAATCTGTCTTCTCTCTaGATCAAGGTACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLNLSSL*IKVLED
Trigger: ATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATT...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR TCA 90 bp TCTAATCCTCCCATGTTGGTGGGTAATGTAGCCAAAATGCTCATCATTATACAAGGCTTCTCTTGGCCTTaGAGAACCAGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SNPPMLVGNVAKMLIIIQGFSWP*RTRPSS
Trigger: GGAGGAAGGCCTGGTTCTTCAAGGCCAAGAGAAGCC...TTGTATAATGATGAGCATTTTGGCTACATTACCCACCAACATGGGAGGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR TCA 90 bp GGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAAAGGAAGCGAAAGGTGGGTGGATCTCTTaGAGCCAGGAGTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: GLLFFKAGKLIVTAKEAKGGWIS*SQEFEI
Trigger: GATCTCAAACTCCTGGCTTCAAGAGATCCACCCACC...TTTCGCTTCCTTTGCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGATCAGCAGACCTTTGTaGTTTTATCCCATAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLISRPL*FYPISR
Trigger: ACGGCTTATGGGATAAAAGCACAAAGGTCTGCTGAT...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp AGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGACATTTGGTCTCTTTCAGCACTAAATaGAGACTCTGTGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: RKCTPWWRAWAVCLGHLVSFSTK*RLCVNV
Trigger: TACATTGACACAGAGTCTGCATTTAGTGCTGAAAGA...GACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGGGGAAAACGGGATTCTaGTATTTCAACCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLGKTGF*YFNQSF
Trigger: GAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCC...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGATACTTCAAGGAGGATaGCTCTCTTGCCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: LGKDENGVHGCFGGKACLILQGG*LSCQEL
Trigger: AAGTTCTTGGCAAGAGAGGCATCCTCCTTGAAGTAT...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR GCA 90 bp AGAGAAGAAGAACTTTTTCACTGGAGACATTGTAAAACCATGACATCCTTTGCTTGGAGACACCAGGTCTaGCTGAGAAGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: REEELFHWRHCKTMTSFAWRHQV*LRSQGS
Trigger: GGAGCCCTGGCTTCTCAGGCAGACCTGGTGTCTCCA...AGCAAAGGATGTCATGGTTTTACAATGTCTCCAGTGAAAAAGTTCTTCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp ATCTGGGTTCCCAGGAGAGAATTAAGCCCAAGACATCCATTGTATGGAATGAATGGACAAATCATCAGCTaGAGACACCAGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: IWVPRRELSPRHPLYGMNGQIIS*RHQVCL
Trigger: CAGGCAGACCTGGTGTCTCCAGCTGATGATTTGTCC...ATTCATTCCATACAATGGATGTCTTGGGCTTAATTCTCTCCTGGGAACCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CCA 90 bp GCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCACACGGCTATCACACAGCTaGATCCAGAAGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ASVSFFQAVRSCFISQITRLSHS*IQKCLQ
Trigger: CTGAAGGCACTTCTGGATCCAGCTGTGTGATAGCCG...TGTGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp CCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTCTGAATCAAGGTACTaGAGGATCAGCCGGGTATTC +
Preference number: 4 (lower is better)
Translates to: PHYVSFRFLLPSSTVLFYSESRY*RISRVF
Trigger: GAATACCCGGCTGATCCTCCAGTACCTTGATTCAGA...ATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp AAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACATTTTCCACAACCTGGTaGACCTGTAATCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KLLLWLLTSHGGKALSPTFSTTW*TCNLGS
Trigger: GGAACCCAGATTACAGGTCCACCAGGTTGTGGAAAA...TGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CCA 90 bp GGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAAAGGAAGCGAAAAGGTGGGAGGATTTCTaGAGCCCAGTTCAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GLLFFKAGKLIVTAKEAKRWEDF*SPVQFS
Trigger: GCTGAACTGAACTGGGCTCCAGAAATCCTCCCACCT...TTTCGCTTCCTTTGCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCTACACACATCTCCAGTaGCCATTGGATGAGATTGCT +
Preference number: 4 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSYTHLQ*PLDEIA
Trigger: AGCAATCTCATCCAATGGCCACTGGAGATGTGTGTA...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
3UTR CAA 72 bp GAAACTGGGGCAAAATCTAGGCTACTGGATCCTAGTTaGTCTCAGCCTCAAGAAATTCAAGCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ETGAKSRLLDPS*SQPQEIQAATV
Trigger: CACTGTGGCAGCTTGAATTTCTTGAGGCTGAGACAAACTAGGATCCAGTAGCCTAGATTTTGCCCCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp AAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCAAACTCCTTTCTaGCCACAGAAGCAACAGAGT +
Preference number: 4 (lower is better)
Translates to: KLLLWLLTSHGGKALSPTHQTPF*PQKQQS
Trigger: ACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATG...TGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp CCTTCCCTGCTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTGTTCATCAAACTCCTTTCTaGCCACAGAAGCAACAGAGT +
Preference number: 4 (lower is better)
Translates to: PSLLGLKSLAQWFRSKSVHQTPF*PQKQQS
Trigger: ACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATG...AACAGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAGCAGGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATAATCTGTCTTCTCTCTaGATCAAGGTACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLLWLLTSHGGKALSPTHNLSSL*IKVLED
Trigger: ATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATT...ATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp ATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCATGTAGACAAATGAGGTaGAGGGAGCCAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: IMSASVSFFQAVRSCFISCRQMR*REPEGT
Trigger: AGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACA...TGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATATTATTATGGCTGTTaGCATCCCATGGCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SPLCQLPFPSSKQYGPVLYYYGC*HPMAAK
Trigger: CTTTGCCGCCATGGGATGTCAACAGCCATAATAATA...TAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp ATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTGAGGTGCCTGGTTaGAAGGTGCTATATAAGTGC +
Preference number: 4 (lower is better)
Translates to: INPHYVSFRFLLPSSTVLFEVPG*KVLYKC
Trigger: GCACTTATATAGCACCTTTCAACCAGGCACCTCAAA...CAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp ATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCAATGTACCATCCTCTGTaGGGGATCCACAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: IMSASVSFFQAVRSCFISMYHPL*GIHKPH
Trigger: GTGTGGCTTGTGGATCCCTCACAGAGGATGGTACAT...TGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR TCA 90 bp TTGCTGTCGGATGTTAAATGTAGATCTGGAAGTCGTGGTGAAAAACTAGGCTGGACAGTTCTAACAACTTaGAGAACCAGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSDVKCRSGSRGEKLGWTVLTT*RTRPSS
Trigger: GGAGGAAGGCCTGGTTCTTCAAGTTGTTAGAACTGT...CCAGCCTAGTTTTTCACCACGACTTCCAGATCTACATTTAACATCCGACAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp CAATCCTTTTACAATAGAGATGCTGCAAGGAGGGCAGAAGCTCTAATCACTCTGATCTGGAAGTCGTGGTaGAAAACTAGGCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: QSFYNRDAARRAEALITLIWKSW*KTRLGY
Trigger: GTAACCCAGCCTAGTTTTTCACCACGACTTCCAGAT...CAGAGTGATTAGAGCTTCTGCCCTCCTTGCAGCATCTCTATTGTAAAAGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR GCA 90 bp GAGGAAATGAGATCTCACGTGGGGATCAAGGGTTGTAGGAGTGGGAGGAAGATGTCTTTCAGCACTAAATaGAGACTCTGTGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: EEMRSHVGIKGCRSGRKMSFSTK*RLCVNV
Trigger: TACATTGACACAGAGTCTGCATTTAGTGCTGAAAGA...CATCTTCCTCCCACTCCTACAACCCTTGATCCCCACGTGAGATCTCATTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR GCA 90 bp TTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAATTGCCTTGAAGTTGTaGATCAAACTCCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LLWLLTSHGGKALSPTHLIALKL*IKLLSD
Trigger: GTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAAT...TAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp TCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATATTGCCTTGAAGTTGTaGATCAAACTCCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SNHSAEDPAGGNEISRGDIALKL*IKLLSD
Trigger: GTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAAT...ATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR GCA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCATACTTCAAGGAGGATaGCTCTCTTGCCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSILQGG*LSCQEL
Trigger: AAGTTCTTGGCAAGAGAGGCATCCTCCTTGAAGTAT...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp TCTGCTATTTCAACCAGTCTTTCAGCACTAAATGCAGACTCTGTGTCAATGTACCGGCTATCACACAGCTaGATCCAGAAGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SAISTSLSALNADSVSMYRLSHS*IQKCLQ
Trigger: CTGAAGGCACTTCTGGATCCAGCTGTGTGATAGCCG...GTACATTGACACAGAGTCTGCATTTAGTGCTGAAAGACTGGTTGAAATAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CCA 90 bp GAGATTGCCTTGAAGTTGTGCATCAAACTCCTTTCTGACCACAGAAGCAACAGAGTCACAGTATCCCTATaGCTTCTCTTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: EIALKLCIKLLSDHRSNRVTVSL*LLLALK
Trigger: CTTCAAGGCCAAGAGAAGCCATAGGGATACTGTGAC...TCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CCA 90 bp GTCACCTGTCACTCCATTGCCCCCTTTCTCATTCTTGTGGCCCTACACACATCTGGACAAAATTCTCATTaGAATGGCAAAGTCTCATAC +
Preference number: 4 (lower is better)
Translates to: VTCHSIAPFLILVALHTSGQNSH*NGKVSY
Trigger: GTATGAGACTTTGCCATTCCAATGAGAATTTTGTCC...AGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGGCAATGGAGTGACAGGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACTCTTTTAGTCTGTTCTaGATTGAGAAACCAGATATG +
Preference number: 4 (lower is better)
Translates to: CFPERVARVITVKYFLMHSFSLF*IEKPDM
Trigger: CATATCTGGTTTCTCAATCCAGAACAGACTAAAAGA...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
3UTR CAA 72 bp GGCCCTACACACATCTCCAGTGGCCATTGGATGAGATaGCTAAGGACAAAATTCTCATTGGAATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GPTHISSGHWMR*LRTKFSLEWQS
Trigger: ACTTTGCCATTCCAATGAGAATTTTGTCCTTAGCAATCTCATCCAATGGCCACTGGAGATGTGTGTAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTAGAACTTCATCACAGGTaGGTTCCCGATAAAGATGAA +
Preference number: 4 (lower is better)
Translates to: SPLCQLPFPSSKQYGPVLELHHR*VPDKDE
Trigger: TTCATCTTTATCGGGAACTCACCTGTGATGAAGTTC...TAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TTGCTGTCGGATGTTAAATGTAGATCTGGAAGTCGTGGTGAAAAACTAGGCTGGCATCAAACTCCTTTCTaGCCACAGAAGCAACAGAGT +
Preference number: 4 (lower is better)
Translates to: LLSDVKCRSGSRGEKLGWHQTPF*PQKQQS
Trigger: ACTCTGTTGCTTCTGTGGTCAGAAAGGAGTTTGATG...CCAGCCTAGTTTTTCACCACGACTTCCAGATCTACATTTAACATCCGACAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp CTCAACAGCAATCAACTAATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTTGTAGACAAATGAGGTaGAGGGAGCCAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LNSNQLINPHYVSFRFLLCRQMR*REPEGT
Trigger: AGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACA...AAGAAGGAAACGGAAGCTGACATAATGGGGATTAATTAGTTGATTGCTGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TCACTCTTTCTTCTGTCTTCTCTCTCTCTCTGTTTTCAAATGCTGGTTGTGATTTGTAGACAAATGAGGTaGAGGGAGCCAGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: SLFLLSSLSLCFQMLVVICRQMR*REPEGT
Trigger: AGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACA...AATCACAACCAGCATTTGAAAACAGAGAGAGAGAGAAGACAGAAGAAAGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554575.2
CDS-3UTR TCA 90 bp AAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACAACACATCTAGAGACCTaGACAAAGGCTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: KLLLWLLTSHGGKALSPTTHLET*TKASSS
Trigger: AGATGAAGAAGCCTTTGTTCAGGTCTCTAGATGTGT...TGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp AATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTATCAGCAGACCTTTGTaGTTTTATCCCATAAGCCGT +
Preference number: 4 (lower is better)
Translates to: NPHYVSFRFLLPSSTVLFISRPL*FYPISR
Trigger: ACGGCTTATGGGATAAAAGCACAAAGGTCTGCTGAT...AAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp CCTTCCCTGCTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTGTTATACTTCAAGGAGGATaGCTCTCTTGCCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: PSLLGLKSLAQWFRSKSVILQGG*LSCQEL
Trigger: AAGTTCTTGGCAAGAGAGGCATCCTCCTTGAAGTAT...AACAGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAGCAGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp TCACCTTCCCTGCTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTAGTTTTTCCACAACCTaGTGGACCTGTAATCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPSLLGLKSLAQWFRSKSSFSTT*WTCNLC
Trigger: ACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACT...AGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAGCAGGGAAGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471583.5
CDS-3UTR CCA 90 bp AGAGAAGAAGAACTTTTTCACTGGAGACATTGTAAAACCATGACATCCTTTGCTGGCACATGGAGACACTaGGTAACAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: REEELFHWRHCKTMTSFAGTWRH*VTAWDS
Trigger: GGAATCCCAGGCTGTTACCCAGTGTCTCCATGTGCC...AGCAAAGGATGTCATGGTTTTACAATGTCTCCAGTGAAAAAGTTCTTCTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp CTGGGGCAAAATCTAGGCTACTGGATCCTAGTTTGTCTCAGCCTCAAGAAATTCTTCCTTAAAAGCCATTaGTCATTTGATGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LGQNLGYWILVCLSLKKFFLKSH*SFDGPD
Trigger: GTCTGGCCCATCAAATGACCAATGGCTTTTAAGGAA...GAATTTCTTGAGGCTGAGACAAACTAGGATCCAGTAGCCTAGATTTTGCCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp TCTCTCTCTCTCTGTTTTCAAATGCTGGTTGTGATTCATCAATTTCACTTCATGGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLSLCFQMLVVIHQFHFMDGVDK*GEGSQR
Trigger: CCTCTGGCTCCCTTCACCTCATTTGTCTACACCATC...CATGAAGTGAAATTGATGAATCACAACCAGCATTTGAAAACAGAGAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554575.2
CDS-3UTR TCA 90 bp AATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTCAAGATAACTGGGATTaGAAACTCCTCAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: NPHYVSFRFLLPSSTVLFQDNWD*KLLSQI
Trigger: TATTTGGCTGAGGAGTTTTCAATCCCAGTTATCTTG...AAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTCAAGATAACTGGGATTaGAAACTCCTCAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: LIPIMSASVSFFQAVRSCQDNWD*KLLSQI
Trigger: TATTTGGCTGAGGAGTTTTCAATCCCAGTTATCTTG...ACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp CTTCAGCAATCCTTTTACAATAGAGATGCTGCAAGGAGGGCAGAAGCTCTAATCAGATGGGTTGTAATCTaGTTCGTCAAGATAACTGGG +
Preference number: 4 (lower is better)
Translates to: LQQSFYNRDAARRAEALIRWVVI*FVKITG
Trigger: CCCAGTTATCTTGACGAATCAGATTACAACCCATCT...GATTAGAGCTTCTGCCCTCCTTGCAGCATCTCTATTGTAAAAGGATTGCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp CTTCAGCAATCCTTTTACAATAGAGATGCTGCAAGGAGGGCAGAAGCTCTAATCGATTCCTTGTTTTTCTaGGCACCACATCAGGTATCA +
Preference number: 4 (lower is better)
Translates to: LQQSFYNRDAARRAEALIDSLFF*APHQVS
Trigger: TGATACCTGATGTGGTGCTCAGAAAAACAAGGAATC...GATTAGAGCTTCTGCCCTCCTTGCAGCATCTCTATTGTAAAAGGATTGCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR TCA 90 bp TCTTCACTCTTTCTTCTGTCTTCTCTCTCTCTCTGTTTTCAAATGCTGGTTGTGTTTCATTTTCCAGCTTaGAGAACCAGGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSLFLLSSLSLCFQMLVVFHFPA*RTRPSS
Trigger: GGAGGAAGGCCTGGTTCTTCAAGCTGGAAAATGAAA...CACAACCAGCATTTGAAAACAGAGAGAGAGAGAAGACAGAAGAAAGAGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554575.2
CDS-3UTR GCA 90 bp TGTTACCATCTCAACAGCAATCAACTAATTAATCCCCATTATGTCAGCTTCCGTTACCCATGCCGGGTCTaGAGCATCCAACTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: CYHLNSNQLINPHYVSFRYPCRV*SIQLSS
Trigger: ACTTGAAAGTTGGATGCTGCAGACCCGGCATGGGTA...ACGGAAGCTGACATAATGGGGATTAATTAGTTGATTGCTGTTGAGATGGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp CCTGTAATCTGGGTTCCCAGGAGAGAATTAAGCCCAAGACATCCATTGTATGGAATTGCCTTGAAGTTGTaGATCAAACTCCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PVIWVPRRELSPRHPLYGIALKL*IKLLSD
Trigger: GTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAAT...TCCATACAATGGATGTCTTGGGCTTAATTCTCTCCTGGGAACCCAGATTACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR GCA 90 bp CAATCCTTTTACAATAGAGATGCTGCAAGGAGGGCAGAAGCTCTAATCACTCTGATACTTCAAGGAGGATaGCTCTCTTGCCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: QSFYNRDAARRAEALITLILQGG*LSCQEL
Trigger: AAGTTCTTGGCAAGAGAGGCATCCTCCTTGAAGTAT...CAGAGTGATTAGAGCTTCTGCCCTCCTTGCAGCATCTCTATTGTAAAAGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CCA 90 bp TTGCTGTCGGATGTTAAATGTAGATCTGGAAGTCGTGGTGAAAAACTAGGCTGGAGTTTTTCCACAACCTaGTGGACCTGTAATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLSDVKCRSGSRGEKLGWSFSTT*WTCNLC
Trigger: ACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACT...CCAGCCTAGTTTTTCACCACGACTTCCAGATCTACATTTAACATCCGACAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487861.5
3UTR CAA 72 bp TTCATGGATGCATTATTTCAGACAAAACAGGCTCCCTaGACTGATTTCCCTTTGGCCCTGGTCTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FMDALFQTKQAP*TDFPLALVFFS
Trigger: AGAAAAGAAGACCAGGGCCAAAGGGAAATCAGTCAAGGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp ATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCATATTATTATGGCTGTTaGCATCCCATGGCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: IMSASVSFFQAVRSCFISYYYGC*HPMAAK
Trigger: CTTTGCCGCCATGGGATGTCAACAGCCATAATAATA...TGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp CTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTGTTACCATCTCAGGGAAAACGGGATTCTaGTATTTCAACCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LGLKSLAQWFRSKSVTISGKTGF*YFNQSF
Trigger: GAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCC...TGAGATGGTAACAGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp GCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCACAATACTTCAAGGAGGATaGCTCTCTTGCCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: ASVSFFQAVRSCFISQITILQGG*LSCQEL
Trigger: AAGTTCTTGGCAAGAGAGGCATCCTCCTTGAAGTAT...TGTGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
3UTR CAA 72 bp TCAATGTACACCACAGCTCCTTCTAATCCTCCCATGTaGGTGGGTAATGTAGCCAAAATGCTCATCATTATA +
Preference number: 4 (lower is better)
Translates to: SMYTTAPSNPPM*VGNVAKMLIII
Trigger: TATAATGATGAGCATTTTGGCTACATTACCCACCAACATGGGAGGATTAGAAGGAGCTGTGGTGTACATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR TCA 90 bp TATCTGGGAAAACGGGATTCTGCTATTTCAACCAGTCTTTCAGCACTAAATGCAAATCTGTCTTCTCTCTaGATCAAGGTACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: YLGKRDSAISTSLSALNANLSSL*IKVLED
Trigger: ATCCTCCAGTACCTTGATTCAGAGAGAAGACAGATT...TGCATTTAGTGCTGAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR GCA 90 bp TTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTGCCTGGTTGAAAGGTaGTATATAAGTGCAAATTAT +
Preference number: 4 (lower is better)
Translates to: LIPIMSASVSFFQAVRSCCLVER*YISANY
Trigger: ATAATTTGCACTTATATAGCACCTTTCAACCAGGCA...ACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp ATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTTGCCTGGTTGAAAGGTaGTATATAAGTGCAAATTAT +
Preference number: 4 (lower is better)
Translates to: IPIMSASVSFFQAVRSCFCLVER*YISANY
Trigger: ATAATTTGCACTTATATAGCACCTTTCAACCAGGCA...AAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CCA 90 bp TCAGCACTAAATGCAGACTCTGTGTCAATGTACACCACAGCTCCTTCTAATCCTTGCAAATTATTATTATaGCTGTTGACATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: SALNADSVSMYTTAPSNPCKLLL*LLTSHG
Trigger: GCCATGGGATGTCAACAGCCATAATAATAATTTGCA...AGGATTAGAAGGAGCTGTGGTGTACATTGACACAGAGTCTGCATTTAGTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CCA 90 bp ATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGAAGACATCCATTGTATaGAATGAATTAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: INPHYVSFRFLLPSSTVLKTSIV*NELTSP
Trigger: GGGAGAAGTTAATTCATTCCATACAATGGATGTCTT...CAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CCA 90 bp CTCAACAGCAATCAACTAATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTAGTTTTTCCACAACCTaGTGGACCTGTAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: LNSNQLINPHYVSFRFLLSFSTT*WTCNLG
Trigger: ACCCAGATTACAGGTCCACCAGGTTGTGGAAAAACT...AAGAAGGAAACGGAAGCTGACATAATGGGGATTAATTAGTTGATTGCTGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR TCA 90 bp GTGCTATATAAGTGCAAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAAGATGGGTTGTAATCTaGTTCGTCAAGATAACTGGG +
Preference number: 4 (lower is better)
Translates to: VLYKCKLLLWLLTSHGGKRWVVI*FVKITG
Trigger: CCCAGTTATCTTGACGAATCAGATTACAACCCATCT...TTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTTGCACTTATATAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TGTTACCATCTCAACAGCAATCAACTAATTAATCCCCATTATGTCAGCTTCCGTACACATCTAGAGACCTaGACAAAGGCTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CYHLNSNQLINPHYVSFRTHLET*TKASSS
Trigger: AGATGAAGAAGCCTTTGTTCAGGTCTCTAGATGTGT...ACGGAAGCTGACATAATGGGGATTAATTAGTTGATTGCTGTTGAGATGGTAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR TCA 90 bp TTATACTCAATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCTTGAAGCCAGGAGTTTaGGATCAGCTTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LYSIHLFMDALFQTKQAPLKPGV*DQLGQH
Trigger: ATGTTGCCCAAGCTGATCTCAAACTCCTGGCTTCAA...GGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAATTGAGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR GCA 90 bp GCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCACATCTTTCAGCACTAAATaGAGACTCTGTGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: ASVSFFQAVRSCFISQITSFSTK*RLCVNV
Trigger: TACATTGACACAGAGTCTGCATTTAGTGCTGAAAGA...TGTGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp GTGCTATATAAGTGCAAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGGGAAAACGGGATTCTaGTATTTCAACCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VLYKCKLLLWLLTSHGGKGKTGF*YFNQSF
Trigger: GAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCC...TTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTTGCACTTATATAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp AGAGAAGAAGAACTTTTTCACTGGAGACATTGTAAAACCATGACATCCTTTGCTTGTTCTGATTCCAGTTaGCCAGTTTGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: REEELFHWRHCKTMTSFACSDSS*PVCRRK
Trigger: CTTCCTCCTACAAACTGGGCAACTGGAATCAGAACA...AGCAAAGGATGTCATGGTTTTACAATGTCTCCAGTGAAAAAGTTCTTCTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
3UTR CAA 72 bp CAAGAACTTGTTTCTTTCTTTGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCTGACCACAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QELVSFFEIALK*CIKLLSDHRSN
Trigger: GTTGCTTCTGTGGTCAGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAAAGAAACAAGTTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR TCA 90 bp TTATACTCAATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCTCAGTTCAGCTTGGGTaGCAGAGCAAAATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LYSIHLFMDALFQTKQAPSVQLG*QSKMLS
Trigger: AGACAACATTTTGCTCTGTCACCCAAGCTGAACTGA...GGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAATTGAGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR TCA 90 bp AGAGAAGAAGAACTTTTTCACTGGAGACATTGTAAAACCATGACATCCTTTGCTCAAGATAACTGGGATTaGAAACTCCTCAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: REEELFHWRHCKTMTSFAQDNWD*KLLSQI
Trigger: TATTTGGCTGAGGAGTTTTCAATCCCAGTTATCTTG...AGCAAAGGATGTCATGGTTTTACAATGTCTCCAGTGAAAAAGTTCTTCTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR GCA 90 bp CTCAACAGCAATCAACTAATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTTCTTTCAGCACTAAATaGAGACTCTGTGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: LNSNQLINPHYVSFRFLLSFSTK*RLCVNV
Trigger: TACATTGACACAGAGTCTGCATTTAGTGCTGAAAGA...AAGAAGGAAACGGAAGCTGACATAATGGGGATTAATTAGTTGATTGCTGTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR GCA 90 bp TTATACTCAATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCAGGCATTTACCAAAATaGTGTGGTTCATCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LYSIHLFMDALFQTKQAPRHLPK*CGSSRQ
Trigger: CTGCCTAGATGAACCACAGCATTTTGGTAAATGCCT...GGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAATTGAGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CCA 90 bp GTGCTATATAAGTGCAAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAATGCAAATTATTATTATaGCTGTTGACATCCCATGGC +
Preference number: 4 (lower is better)
Translates to: VLYKCKLLLWLLTSHGGKCKLLL*LLTSHG
Trigger: GCCATGGGATGTCAACAGCCATAATAATAATTTGCA...TTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTTGCACTTATATAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS CCA 90 bp CACGGGCCCTTCATGGAGTTTGCTCCTGGCAGCTCCCAGAGTGGCTaGCCGGATCCCACACTCGCTAGCTCATGCCTGGTCTGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: HGPFMEFAPGSSQSG*PDPTLASSCLVWPR
Trigger: CCGCGGCCAGACCAGGCATGAGCTAGCGAGTGTGGGATCCGGCCAGCCACTCTGGGAGCTGCCAGGAGCAAACTCCATGAAGGGCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CCA 90 bp ACAACCTGGTGGACCTGTAATCTGGGTGCCTCCACGGGCCCTTCATaGAGTTTGCTCCTGGCAGCTCCCAGAGTGGCTGGCCGGATCCCA +
Preference number: 5 (lower is better)
Translates to: TTWWTCNLGASTGPS*SLLLAAPRVAGRIP
Trigger: TGGGATCCGGCCAGCCACTCTGGGAGCTGCCAGGAGCAAACTCCATGAAGGGCCCGTGGAGGCACCCAGATTACAGGTCCACCAGGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS-3UTR CAA 90 bp GAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCGGTGGAAAGGCTTGCTaGGTTCTTCTGCCTTTGCCG +
Preference number: 5 (lower is better)
Translates to: ERVARVITVKYFLMHTAVGGKAC*VLLPLP
Trigger: CGGCAAAGGCAGAAGAACCAAGCAAGCCTTTCCACC...GACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp TGCCTGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCGAGTTTGAGATCAGCTaGGGCAACATAATGAGACCC +
Preference number: 5 (lower is better)
Translates to: CLGHLVWGGAPEQVTCHSEFEIS*GNIMRP
Trigger: GGGTCTCATTATGTTGCCCAAGCTGATCTCAAACTC...GGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACTTGGTTCTTCTGCCTTaGCCGGGGGACCTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: CFPERVARVITVKYFLMHLVLLP*PGDLGV
Trigger: CACTCCCAGGTCCCCCGGCAAAGGCAGAAGAACCAA...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTATCCCATAAGCCGTTaGCATCTTTGGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: VARVITVKYFLMHTAVSSYPISR*HLWGTG
Trigger: GCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATA...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp AGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTGTTTCCACGTCCCTGGTCCTTTCATCTCCAGTGGCCATaGGATGAGATTGCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: SGWRGALVHLLFPRPWSFHLQWP*DEIAKD
Trigger: GTCCTTAGCAATCTCATCCAATGGCCACTGGAGATG...AAAGGACCAGGGACGTGGAAACAGGAGGTGAACTAAGGCACCCCGCCACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCTATCCCATAAGCCGTTaGCATCTTTGGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGYPISR*HLWGTG
Trigger: GCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATA...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp CTCAAGAAATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTTATCCCATAAGCCGTTaGCATCTTTGGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: LKKFKLPQWVAGCLSSPPYPISR*HLWGTG
Trigger: GCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATA...AGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATTTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACGGGTTCATGGCTGCTTaGGTGGAAAGGCTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: CFPERVARVITVKYFLMHGFMAA*VERLAW
Trigger: CCAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCC...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp ATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGACCTGAACAAAGGCACTCGTTTTAGTTTCTaGCTACCCATGCCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: IPWRQSPQPYTSRDLNKGTRFSF*LPMPGL
Trigger: CAGACCCGGCATGGGTAGCAAGAAACTAAAACGAGT...GCCTTTGTTCAGGTCTCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp CCAAAATGCTGTGGTTCATCTAGGCAGAGGGGAAGGCATCGGCTCAGGAGCACTACTCGTTTTAGTTTCTaGCTACCCATGCCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: PKCCGSSRQRGRHRLRSTTRFSF*LPMPGL
Trigger: CAGACCCGGCATGGGTAGCAAGAAACTAAAACGAGT...AGTGCTCCTGAGCCGATGCCTTCCCCTCTGCCTAGATGAACCACAGCATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp GCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGTCTAATCCTCCCATGTaGGTGGGTAATGTAGCCAAA +
Preference number: 5 (lower is better)
Translates to: ASQGENVLHGGGHGLCAWSNPPM*VGNVAK
Trigger: TTTGGCTACATTACCCACCAACATGGGAGGATTAGA...CCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp GATGCTGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGGAGCCAGAGGGGACTaGGCAATAAGAATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: DAARRAEALITLQKTQLEGARGD*AIRICL
Trigger: AAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCC...CTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCCTTTGGTGGAAAGGCTaGCTTGGTTCTTCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: VARVITVKYFLMHTAVSSLWWKG*LGSSAF
Trigger: AAAGGCAGAAGAACCAAGCAAGCCTTTCCACCAAAG...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS TCA 90 bp GCTGAGGTGGGAGGATTTCTGGAGCCCAGTTCAGTTCAGCTTGGGTaGCAGAGCAAAATGTTGTCTCTTGAAGAACCAGGCCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: AEVGGFLEPSSVQLG*QSKMLSLEEPGLPP
Trigger: AGGAGGAAGGCCTGGTTCTTCAAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGGGCTCCAGAAATCCTCCCACCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS CCA 90 bp GTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCTaGCTCCGATGGGTGGGTCTCATCTGTAGCAATCTCAGGACTCAT +
Preference number: 5 (lower is better)
Translates to: VKYFLMHTAVSSFKA*LRWVGLICSNLRTH
Trigger: ATGAGTCCTGAGATTGCTACAGATGAGACCCACCCATCGGAGCCAGGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp TGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATTATCCCATAAGCCGTTaGCATCTTTGGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: CKEGRSSNHSAEDPAGGNYPISR*HLWGTG
Trigger: GCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATA...ATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp TTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTATGGCTTCTCTTGGCCTaGAAGAACCAGGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLWLLTSHGGKALSPTHLWLLLA*KNQAFL
Trigger: GAGGAAGGCCTGGTTCTTCAAGGCCAAGAGAAGCCA...TAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATCAGAAGAGAGGACAGTaGAGTGCATCTGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SNHSAEDPAGGNEISRGDQKRGQ*SASVEG
Trigger: GCCCTCCACAGATGCACTCAACTGTCCTCTCTTCTG...ATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp AATTCAAGCTGCCACAGTGGGTGGCGGGGTGCCTTAGTTCACCTCCTGTTTCCACCAGTTCAGTTCAGCTaGGGTGACAGAGCAAAATGT +
Preference number: 5 (lower is better)
Translates to: NSSCHSGWRGALVHLLFPPVQFS*GDRAKC
Trigger: ACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGG...TGGAAACAGGAGGTGAACTAAGGCACCCCGCCACCCACTGTGGCAGCTTGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TGCCTGGGACATTTGGTCTGGGGAGGGGCACCTGAGCAGGTCACCTGTCACTCCTCAAGTATAATCTTATaGCCCAGAGATTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: CLGHLVWGGAPEQVTCHSSSIIL*PRDCTV
Trigger: AACAGTGCAATCTCTGGGCAATAAGATTATACTTGA...GGAGTGACAGGTGACCTGCTCAGGTGCCCCTCCCCAGACCAAATGTCCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS TCA 90 bp CTGCCCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: LPLKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478014.5
CDS-3UTR CAA 90 bp GTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCGAAATCAGCAGACCTTaGTGCTTTTATCCCATAAGC +
Preference number: 5 (lower is better)
Translates to: VARVITVKYFLMHTAVSSEISRP*CFYPIS
Trigger: GCTTATGGGATAAAAGCACAAAGGTCTGCTGATTTC...GGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp GTCATCACCGTGAAGTACTTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCGGAGCCAGAGGGGACTaGGCAATAAGAATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: VITVKYFLMHTAVSSFKAGARGD*AIRICL
Trigger: AAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCC...GGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAAGTACTTCACGGTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp AGAAAATGTACTCCATGGTGGAGGGCATGGGCTGTGTGCCTGGGACATTTGGTCGCAAAATGTTGTCTCTaGAAGAACCAGGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RKCTPWWRAWAVCLGHLVAKCCL*KNQAFL
Trigger: GAGGAAGGCCTGGTTCTTCAAGAGACAACATTTTGC...GACCAAATGTCCCAGGCACACAGCCCATGCCCTCCACCATGGAGTACATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp CCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACACTGCGAGCAGAGTGAATATGTaGATATGGTGGCTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: PERVARVITVKYFLMHTASRVNM*IWWLKK
Trigger: CTTCTTAAGCCACCATATCAACATATTCACTCTGCT...CGCAGTGTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS TCA 90 bp TCCAGCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: SSLKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554575.2
CDS-3UTR CAA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGACTCGTTTTAGTTTCTaGCTACCCATGCCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LGKDENGVHGCFGGKACLTRFSF*LPMPGL
Trigger: CAGACCCGGCATGGGTAGCAAGAAACTAAAACGAGT...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACTCTAATCCTCCCATGTaGGTGGGTAATGTAGCCAAA +
Preference number: 5 (lower is better)
Translates to: CFPERVARVITVKYFLMHSNPPM*VGNVAK
Trigger: TTTGGCTACATTACCCACCAACATGGGAGGATTAGA...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp GATGCTGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: DAARRAEALITLQKTQLEEIALK*CIKLLS
Trigger: AGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTC...CTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp CACAATGTAGACATTGGGGAGACTGACTCAGGCTGCTCCCTTGTTCTGGTCATAGGAGCCAGAGGGGACTaGGCAATAAGAATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: HNVDIGETDSGCSLVLVIGARGD*AIRICL
Trigger: AAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCC...TATGACCAGAACAAGGGAGCAGCCTGAGTCAGTCTCCCCAATGTCTACATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTCCCTATGGCTTCTCTaGGCCTTGAAGAACCAGGCC +
Preference number: 5 (lower is better)
Translates to: LIPIMSASVSFFQAVRSCSLWLL*ALKNQA
Trigger: GGCCTGGTTCTTCAAGGCCAAGAGAAGCCATAGGGA...ACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATCACAGTTCTAACAACTaGAAGAACCAGGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: CKEGRSSNHSAEDPAGGNHSSNN*KNQAFL
Trigger: GAGGAAGGCCTGGTTCTTCAAGTTGTTAGAACTGTG...ATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCCCCCCTTTCTCATTCTaGTGGCCCTACACACATCTC +
Preference number: 5 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSPPFSF*WPYTHL
Trigger: GAGATGTGTGTAGGGCCACAAGAATGAGAAAGGGGG...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS TCA 90 bp CTTTTATCCCATAAGCCGTTTGCATCTTTGGGGCACAGGCCCTGCTaGCCATACATAGAAGTTCATGGACACCTCGATAACTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: LLSHKPFASLGHRPC*PYIEVHGHLDNSDQ
Trigger: CTGGTCTGAGTTATCGAGGTGTCCATGAACTTCTATGTATGGTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000390683.7
ENST00000471583.5
ENST00000479335.5
ENST00000485181.5
ENST00000487270.5
ENST00000487861.5
ENST00000488612.5
ENST00000553334.1
CDS TCA 90 bp AGGATCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: RILKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469165.6
CDS TCA 90 bp ATAGGCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: IGLKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460526.5
ENST00000554183.1
ENST00000557045.5
CDS TCA 90 bp TGTCTCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: CLLKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS TCA 90 bp AGATCCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: RSLKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497460.5
CDS TCA 90 bp GCTGAGGTGGGAGGATTTCTGGAGCCCAGTTCAGTTCAGCTTGGGTaGCAGAGCAAAATGTTGTCTCTCTACTCTGGTGGAACTTCTTTA +
Preference number: 5 (lower is better)
Translates to: AEVGGFLEPSSVQLG*QSKMLSLYSGGTSL
Trigger: TAAAGAAGTTCCACCAGAGTAGAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGGGCTCCAGAAATCCTCCCACCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556251.1
CDS GCA 90 bp TGTTTACTGCCCCCTTGCAGGCAGCTGTCAGGAAACCACAGAAGGTaGTTGAAGGCACACAAGAAATGGCTGGTTCTAATCTTGAAGAAC +
Preference number: 5 (lower is better)
Translates to: CLLPPCRQLSGNHRR*LKAHKKWLVLILKN
Trigger: GTTCTTCAAGATTAGAACCAGCCATTTCTTGTGTGCCTTCAAGCACCTTCTGTGGTTTCCTGACAGCTGCCTGCAAGGGGGCAGTAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554244.5
CDS CCA 90 bp TTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCTGGCTCCGATaGGTGGGTCTCATCTGTAGCAATCTCAGGACTCATTTTCTTTTA +
Preference number: 5 (lower is better)
Translates to: FLMHTAVSSFKAWLR*VGLICSNLRTHFLL
Trigger: TAAAAGAAAATGAGTCCTGAGATTGCTACAGATGAGACCCACCCATCGGAGCCAGGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp TGCAAGGAGGGCAGAAGCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATTCTAATCCTCCCATGTaGGTGGGTAATGTAGCCAAA +
Preference number: 5 (lower is better)
Translates to: CKEGRSSNHSAEDPAGGNSNPPM*VGNVAK
Trigger: TTTGGCTACATTACCCACCAACATGGGAGGATTAGA...ATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGCTTCTGCCCTCCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp GAGACTGACTCAGGCTGCTCCCTTGTTCTGGTCATAAGTCACTTAGTCCTTCCTAAAGCCATTGGTCATTaGATGGGCCAGACAGACTTC +
Preference number: 5 (lower is better)
Translates to: ETDSGCSLVLVISHLVLPKAIGH*MGQTDF
Trigger: GAAGTCTGTCTGGCCCATCAAATGACCAATGGCTTT...AGGAAGGACTAAGTGACTTATGACCAGAACAAGGGAGCAGCCTGAGTCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS TCA 90 bp CTAATCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: LILKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554244.5
CDS-3UTR CAA 90 bp TTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTACTCGTTTTAGTTTCTaGCTACCCATGCCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LIPIMSASVSFFQAVRSCTRFSF*LPMPGL
Trigger: CAGACCCGGCATGGGTAGCAAGAAACTAAAACGAGT...ACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp GGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCTCTCTTGCCAAGAACTaGTTTCTTTCTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: GPLAQQQAREKMYSMVEGSLAKN*FLSLRL
Trigger: CAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGAGA...GCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp CACAATGTAGACATTGGGGAGACTGACTCAGGCTGCTCCCTTGTTCTGGTCATAAGGAGGATGCCTCTCTaGCCAAGAACTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: HNVDIGETDSGCSLVLVIRRMPL*PRTCFF
Trigger: AAAGAAACAAGTTCTTGGCAAGAGAGGCATCCTCCT...TATGACCAGAACAAGGGAGCAGCCTGAGTCAGTCTCCCCAATGTCTACATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGAGGAGGATGCCTCTCTaGCCAAGAACTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LGKDENGVHGCFGGKACLRRMPL*PRTCFF
Trigger: AAAGAAACAAGTTCTTGGCAAGAGAGGCATCCTCCT...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp TTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTGGAGCCAGAGGGGACTaGGCAATAAGAATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LIPIMSASVSFFQAVRSCGARGD*AIRICL
Trigger: AAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCC...ACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp CAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCATCCCTATGGCTTCTCTaGGCCTTGAAGAACCAGGCC +
Preference number: 5 (lower is better)
Translates to: QLPFPSSKQYGPVLFHKSSLWLL*ALKNQA
Trigger: GGCCTGGTTCTTCAAGGCCAAGAGAAGCCATAGGGA...TGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp GGTCCTTTAGCTCAGCAGCAAGCCAGGGAGAAAATGTACTCCATGGTGGAGGGCAGGACAAAATTCTCATaGGAATGGCAAAGTCTCATA +
Preference number: 5 (lower is better)
Translates to: GPLAQQQAREKMYSMVEGRTKFS*EWQSLI
Trigger: TATGAGACTTTGCCATTCCAATGAGAATTTTGTCCT...GCCCTCCACCATGGAGTACATTTTCTCCCTGGCTTGCTGCTGAGCTAAAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGAATGTGCCAAAATTCTaGAAGAACCAGGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LGKDENGVHGCFGGKACLNVPKF*KNQAFL
Trigger: GAGGAAGGCCTGGTTCTTCAAGAATTTTGGCACATT...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS TCA 90 bp AAATTCTTGAAGAACCAGGCCTTCCTCCTTGATGGTGTAGACAAATaGGGTGAAGGGAGCCAGAGGGGACTTGGCAATAAGAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: KFLKNQAFLLDGVDK*GEGSQRGLGNKNLS
Trigger: AGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCCCTTCACCTCATTTGTCTACACCATCAAGGAGGAAGGCCTGGTTCTTCAAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp CTTCAGCAATCCTTTTACAATAGAGATGCTGCAAGGAGGGCAGAAGCTCTAATCACTCGTTTTAGTTTCTaGCTACCCATGCCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LQQSFYNRDAARRAEALITRFSF*LPMPGL
Trigger: CAGACCCGGCATGGGTAGCAAGAAACTAAAACGAGT...GATTAGAGCTTCTGCCCTCCTTGCAGCATCTCTATTGTAAAAGGATTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp CAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCATATCCCATAAGCCGTTaGCATCTTTGGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: QLPFPSSKQYGPVLFHKSYPISR*HLWGTG
Trigger: GCCTGTGCCCCAAAGATGCAAACGGCTTATGGGATA...TGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LLWLLTSHGGKALSPTHLEIALK*CIKLLS
Trigger: AGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTC...TAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LGKDENGVHGCFGGKACLEIALK*CIKLLS
Trigger: AGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTC...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp ATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGATTCTTTGAGATTGCCTaGAAGTTGTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: IMAVDIPWRQSPQPYTSRFFEIA*KLCIKL
Trigger: GAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAA...TCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp GCTCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGTCTCTTGCCAAGAACTaGTTTCTTTCTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: ALITLQKTQLEEMRSHVGSLAKN*FLSLRL
Trigger: CAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGAGA...CCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp TGTTTTCCTGAGAGGGTGGCGAGGGTCATCACCGTGAAGTACTTCCTCATGCACTCTCTTGCCAAGAACTaGTTTCTTTCTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: CFPERVARVITVKYFLMHSLAKN*FLSLRL
Trigger: CAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGAGA...GTGCATGAGGAAGTACTTCACGGTGATGACCCTCGCCACCCTCTCAGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS CCA 90 bp TTCAGTTCAGCTTGGGTGACAGAGCAAAATGTTGTCTCTCTACTCTaGTGGAACTTCTTTACAATGGCCCCTTCCTTTGGGTCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: FSSAWVTEQNVVSLL*WNFFTMAPSFGSPK
Trigger: TTTTGGAGACCCAAAGGAAGGGGCCATTGTAAAGAAGTTCCACCAGAGTAGAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556251.1
CDS-3UTR CAA 90 bp TCCCTTTGGCCCTGGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCGAAATCAGCAGACCTTaGTGCTTTTATCCCATAAGC +
Preference number: 5 (lower is better)
Translates to: SLWPWSSFLQGRQAYCNSEISRP*CFYPIS
Trigger: GCTTATGGGATAAAAGCACAAAGGTCTGCTGATTTC...GCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACCAGGGCCAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp AAATTATTATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACATCTAATCCTCCCATGTaGGTGGGTAATGTAGCCAAA +
Preference number: 5 (lower is better)
Translates to: KLLLWLLTSHGGKALSPTSNPPM*VGNVAK
Trigger: TTTGGCTACATTACCCACCAACATGGGAGGATTAGA...TGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAATAATAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TCTAATCACTCTGCAGAAGACCCAGCTGGAGGAAATGAGATCTCACGTGGGGATTTCTTTGAGATTGCCTaGAAGTTGTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: SNHSAEDPAGGNEISRGDFFEIA*KLCIKL
Trigger: GAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAA...ATCCCCACGTGAGATCTCATTTCCTCCAGCTGGGTCTTCTGCAGAGTGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp CTTGGAAAGGATGAGAATGGGGTTCATGGCTGCTTTGGTGGAAAGGCTTGCTTGTTCTTTGAGATTGCCTaGAAGTTGTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: LGKDENGVHGCFGGKACLFFEIA*KLCIKL
Trigger: GAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAA...CAAGCAAGCCTTTCCACCAAAGCAGCCATGAACCCCATTCTCATCCTTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS-3UTR CAA 90 bp ATTATGGCTGTTGACATCCCATGGCGGCAAAGCCCTCAGCCCTACACATCTAGATCTCTTGCCAAGAACTaGTTTCTTTCTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: IMAVDIPWRQSPQPYTSRSLAKN*FLSLRL
Trigger: CAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGAGA...TCTAGATGTGTAGGGCTGAGGGCTTTGCCGCCATGGGATGTCAACAGCCATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp ATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGAGGAGGATGCCTCTCTaGCCAAGAACTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: INPHYVSFRFLLPSSTVLRRMPL*PRTCFF
Trigger: AAAGAAACAAGTTCTTGGCAAGAGAGGCATCCTCCT...CAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp CTCAACAGCAATCAACTAATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTTGGCTTCTCTTGGCCTaGAAGAACCAGGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LNSNQLINPHYVSFRFLLWLLLA*KNQAFL
Trigger: GAGGAAGGCCTGGTTCTTCAAGGCCAAGAGAAGCCA...AAGAAGGAAACGGAAGCTGACATAATGGGGATTAATTAGTTGATTGCTGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS TCA 90 bp AAGATAACCCACACTCTGAGAATTCCTGCACTAGACCGTGCTCTTTaGTGGCAGGATCCACGTCTTATTTACCTTTGTATTCCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: KITHTLRIPALDRAL*WQDPRLIYLCIPSS
Trigger: TGAACTGGGAATACAAAGGTAAATAAGACGTGGATCCTGCCATCAAAGAGCACGGTCTAGTGCAGGAATTCTCAGAGTGTGGGTTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468382.5
CDS GCA 90 bp GGTTGTAATCTGATTCGTCAAGATAACCCACACTCTGAGAATTCCTaGACTAGACCGTGCTCTTTGATGGCAGGATCCACGTCTTATTTA +
Preference number: 5 (lower is better)
Translates to: GCNLIRQDNPHSENS*TRPCSLMAGSTSYL
Trigger: TAAATAAGACGTGGATCCTGCCATCAAAGAGCACGGTCTAGTGCAGGAATTCTCAGAGTGTGGGTTATCTTGACGAATCAGATTACAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468382.5
CDS-3UTR CAA 90 bp CCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATGAAATCAGCAGACCTTaGTGCTTTTATCCCATAAGC +
Preference number: 5 (lower is better)
Translates to: PHYVSFRFLLPSSTVLFYEISRP*CFYPIS
Trigger: GCTTATGGGATAAAAGCACAAAGGTCTGCTGATTTC...ATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TATCTGGGAAAACGGGATTCTGCTATTTCAACCAGTCTTTCAGCACTAAATGCAGGAGCCAGAGGGGACTaGGCAATAAGAATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: YLGKRDSAISTSLSALNAGARGD*AIRICL
Trigger: AAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCC...TGCATTTAGTGCTGAAAGACTGGTTGAAATAGCAGAATCCCGTTTTCCCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CAA 90 bp ATTAATCCCCATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTATTATTATGGCTGTaGACATCCCATGGCGGCAAA +
Preference number: 5 (lower is better)
Translates to: INPHYVSFRFLLPSSTVLLLLWL*TSHGGK
Trigger: TTTGCCGCCATGGGATGTCAACAGCCATAATAATAA...CAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAATGGGGATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp CTTCAGCAATCCTTTTACAATAGAGATGCTGCAAGGAGGGCAGAAGCTCTAATCGAAATCAGCAGACCTTaGTGCTTTTATCCCATAAGC +
Preference number: 5 (lower is better)
Translates to: LQQSFYNRDAARRAEALIEISRP*CFYPIS
Trigger: GCTTATGGGATAAAAGCACAAAGGTCTGCTGATTTC...GATTAGAGCTTCTGCCCTCCTTGCAGCATCTCTATTGTAAAAGGATTGCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS TCA 90 bp TCAAATCAGTGCCCATTGTCAGTGCCATGGTATCAAATCAGCTTATaGTGCAGATTACTGTTGGGCTTGTTCTTGATCCTACTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: SNQCPLSVPWYQISL*CRLLLGLFLILLVR
Trigger: TCTCACAAGTAGGATCAAGAACAAGCCCAACAGTAATCTGCATCATAAGCTGATTTGATACCATGGCACTGACAATGGGCACTGATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460526.5
ENST00000469165.6
ENST00000554183.1
CDS TCA 90 bp AAGACATCCATTGTATGGAATGAATTAACTTCTCCCCTCTGCATCTaGATTGGCACTAGTTATGTACCATCCTCTGTGAGGGATCCACAA +
Preference number: 5 (lower is better)
Translates to: KTSIVWNELTSPLCI*IGTSYVPSSVRDPQ
Trigger: TTGTGGATCCCTCACAGAGGATGGTACATAACTAGTGCCAATTCAGATGCAGAGGGGAGAAGTTAATTCATTCCATACAATGGATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CAA 90 bp CTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTGTTACCATCTCAGAAATCAGCAGACCTTaGTGCTTTTATCCCATAAGC +
Preference number: 5 (lower is better)
Translates to: LGLKSLAQWFRSKSVTISEISRP*CFYPIS
Trigger: GCTTATGGGATAAAAGCACAAAGGTCTGCTGATTTC...TGAGATGGTAACAGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp CTAGGTCTGAAATCGCTAGCTCAATGGTTTAGGAGCAAATCTGTTACCATCTCAGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LGLKSLAQWFRSKSVTISEIALK*CIKLLS
Trigger: AGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTC...TGAGATGGTAACAGATTTGCTCCTAAACCATTGAGCTAGCGATTTCAGACCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp GGTCTTCTTTTCTTCAAGGCAGGCAAGCTTATTGTAACAGCAAAGGAAGCGAAAGAGATTGCCTTGAAGTaGTGCATCAAACTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLLFFKAGKLIVTAKEAKEIALK*CIKLLS
Trigger: AGAAAGGAGTTTGATGCACAACTTCAAGGCAATCTC...TTTCGCTTCCTTTGCTGTTACAATAAGCTTGCCTGCCTTGAAGAAAAGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TCAGCACTAAATGCAGACTCTGTGTCAATGTACACCACAGCTCCTTCTAATCCTTTCTTTGAGATTGCCTaGAAGTTGTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: SALNADSVSMYTTAPSNPFFEIA*KLCIKL
Trigger: GAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAA...AGGATTAGAAGGAGCTGTGGTGTACATTGACACAGAGTCTGCATTTAGTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479335.5
CDS-3UTR CAA 90 bp ATTATGTCAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCAAGGAGGATGCCTCTCTaGCCAAGAACTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IMSASVSFFQAVRSCFISRRMPL*PRTCFF
Trigger: AAAGAAACAAGTTCTTGGCAAGAGAGGCATCCTCCT...TGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTGACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCACACCTTATTATTATGGCTGTaGACATCCCATGGCGGCAAA +
Preference number: 5 (lower is better)
Translates to: FRFLLPSSTVLFYFTNHTLLLWL*TSHGGK
Trigger: TTTGCCGCCATGGGATGTCAACAGCCATAATAATAA...GGTGTGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TCTTCACTCTTTCTTCTGTCTTCTCTCTCTCTCTGTTTTCAAATGCTGGTTGTGTTTTCATTTTCCAGCTaGAAGAACCAGGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SSLFLLSSLSLCFQMLVVFSFSS*KNQAFL
Trigger: GAGGAAGGCCTGGTTCTTCAAGCTGGAAAATGAAAA...CACAACCAGCATTTGAAAACAGAGAGAGAGAGAAGACAGAAGAAAGAGTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554575.2
CDS TCA 90 bp GATCCTACTTGTGAGATACATCCTCTAGAATTCCATGACTTAAGCTaGGTCTACACAGTAGCAACCAAATGTTTTAGCAGAGAACGATGG +
Preference number: 5 (lower is better)
Translates to: DPTCEIHPLEFHDLS*VYTVATKCFSRERW
Trigger: CCATCGTTCTCTGCTAAAACATTTGGTTGCTACTGTGTAGACTCAGCTTAAGTCATGGAATTCTAGAGGATGTATCTCACAAGTAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460526.5
ENST00000469165.6
ENST00000554183.1
CDS-3UTR CAA 90 bp TGTTACCATCTCAACAGCAATCAACTAATTAATCCCCATTATGTCAGCTTCCGTTCTAATCCTCCCATGTaGGTGGGTAATGTAGCCAAA +
Preference number: 5 (lower is better)
Translates to: CYHLNSNQLINPHYVSFRSNPPM*VGNVAK
Trigger: TTTGGCTACATTACCCACCAACATGGGAGGATTAGA...ACGGAAGCTGACATAATGGGGATTAATTAGTTGATTGCTGTTGAGATGGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp TTCTCTCTCTCTCTGTTTTCAAATGCTGGTTGTGATTCATCAATTTCACTTCATGGAGCCAGAGGGGACTaGGCAATAAGAATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: FSLSLFSNAGCDSSISLHGARGD*AIRICL
Trigger: AAGACAGATTCTTATTGCCAAGTCCCCTCTGGCTCC...ATGAAGTGAAATTGATGAATCACAACCAGCATTTGAAAACAGAGAGAGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554575.2
CDS-3UTR CAA 90 bp CAGCTTCCGTTTCCTTCTTCCAAGCAGTACGGTCCTGTTTTATTTCACAAATCATCTCTTGCCAAGAACTaGTTTCTTTCTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: QLPFPSSKQYGPVLFHKSSLAKN*FLSLRL
Trigger: CAATCTCAAAGAAAGAAACAAGTTCTTGGCAAGAGA...TGATTTGTGAAATAAAACAGGACCGTACTGCTTGGAAGAAGGAAACGGAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471583.5
ENST00000479335.5
CDS-3UTR CAA 90 bp AGAGAAGAAGAACTTTTTCACTGGAGACATTGTAAAACCATGACATCCTTTGCTAGGAGGATGCCTCTCTaGCCAAGAACTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: REEELFHWRHCKTMTSFARRMPL*PRTCFF
Trigger: AAAGAAACAAGTTCTTGGCAAGAGAGGCATCCTCCT...AGCAAAGGATGTCATGGTTTTACAATGTCTCCAGTGAAAAAGTTCTTCTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS-3UTR CAA 90 bp AAGGACAAAATTCTCATTGGAATGGCAAAGTCTCATACTTGTAATCCTAGCGCTCTACTGGATCCTAGTTaGTCTCAGCCTCAAGAAATT +
Preference number: 5 (lower is better)
Translates to: KDKILIGMAKSHTCNPSALLDPS*SQPQEI
Trigger: AATTTCTTGAGGCTGAGACAAACTAGGATCCAGTAG...AGCGCTAGGATTACAAGTATGAGACTTTGCCATTCCAATGAGAATTTTGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TTATACTCAATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCCAGACTTCACAACCCTaGCTCCAAACACAAGGACAA +
Preference number: 5 (lower is better)
Translates to: LYSIHLFMDALFQTKQAPQTSQP*LQTQGQ
Trigger: TTGTCCTTGTGTTTGGAGCAAGGGTTGTGAAGTCTG...GGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAATTGAGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TTATACTCAATTCATTTGTTCATGGATGCATTATTTCAGACAAAACAGGCTCCCAAGCTAGGAGTGGCCTaGGATGTTCTCTTAATTCCA +
Preference number: 5 (lower is better)
Translates to: LYSIHLFMDALFQTKQAPKLGVA*DVLLIP
Trigger: TGGAATTAAGAGAACATCCAAGGCCACTCCTAGCTT...GGGAGCCTGTTTTGTCTGAAATAATGCATCCATGAACAAATGAATTGAGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS-3UTR CAA 90 bp TGGAAGCATGTATTCCAGGGTGAATCATTTTTAAATCATCTTCCATGTTTAGGATTCTTTGAGATTGCCTaGAAGTTGTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: WKHVFQGESFLNHLPCLGFFEIA*KLCIKL
Trigger: GAGTTTGATGCACAACTTCAAGGCAATCTCAAAGAA...TCCTAAACATGGAAGATGATTTAAAAATGATTCACCCTGGAATACATGCTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS GCA 72 bp CAGAGTGGCTGGCCGGATCCCACACTCGCTAGCTCATaGCTGGTCTGGCCGCGGATCCCACACAGAGCTTGC +
Preference number: 6 (lower is better)
Translates to: QSGWPDPTLASS*LVWPRIPHRAC
Trigger: GCAAGCTCTGTGTGGGATCCGCGGCCAGACCAGGCATGAGCTAGCGAGTGTGGGATCCGGCCAGCCACTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CCA 72 bp TGGCCGGATCCCACACTCGCTAGCTCATGCCTGGTCTaGCCGCGGATCCCACACAGAGCTTGCTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: WPDPTLASSCLV*PRIPHRACSCW
Trigger: CCAGCAGGAGCAAGCTCTGTGTGGGATCCGCGGCCAGACCAGGCATGAGCTAGCGAGTGTGGGATCCGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CAA 72 bp CTCATGCCTGGTCTGGCCGCGGATCCCACACAGAGCTaGCTCCTGCTGGCACTCCGAGCTGTGCTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: LMPGLAADPTQS*LLLALRAVLAR
Trigger: TCTGGCCAGCACAGCTCGGAGTGCCAGCAGGAGCAAGCTCTGTGTGGGATCCGCGGCCAGACCAGGCATGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS GCA 72 bp GTAATCTGGGTGCCTCCACGGGCCCTTCATGGAGTTTaGTCCTGGCAGCTCCCAGAGTGGCTGGCCGGATCC +
Preference number: 6 (lower is better)
Translates to: VIWVPPRALHGV*SWQLPEWLAGS
Trigger: GGATCCGGCCAGCCACTCTGGGAGCTGCCAGGAGCAAACTCCATGAAGGGCCCGTGGAGGCACCCAGATTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CCA 72 bp TGGACCTGTAATCTGGGTGCCTCCACGGGCCCTTCATaGAGTTTGCTCCTGGCAGCTCCCAGAGTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: WTCNLGASTGPS*SLLLAAPRVAG
Trigger: GCCAGCCACTCTGGGAGCTGCCAGGAGCAAACTCCATGAAGGGCCCGTGGAGGCACCCAGATTACAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CAA 72 bp TGTAATCTGGGTGCCTCCACGGGCCCTTCATGGAGTTaGCTCCTGGCAGCTCCCAGAGTGGCTGGCCGGATC +
Preference number: 6 (lower is better)
Translates to: CNLGASTGPSWS*LLAAPRVAGRI
Trigger: GATCCGGCCAGCCACTCTGGGAGCTGCCAGGAGCAAACTCCATGAAGGGCCCGTGGAGGCACCCAGATTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CCA 72 bp TTCATGGAGTTTGCTCCTGGCAGCTCCCAGAGTGGCTaGCCGGATCCCACACTCGCTAGCTCATGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: FMEFAPGSSQSG*PDPTLASSCLV
Trigger: GACCAGGCATGAGCTAGCGAGTGTGGGATCCGGCCAGCCACTCTGGGAGCTGCCAGGAGCAAACTCCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CCA 72 bp CACACTGCGGTCAGTTCCTTCAAAGCCTGGCTCCGATaGGTGGGTCTCATCTGTAGCAATCTCAGGACTCAT +
Preference number: 6 (lower is better)
Translates to: HTAVSSFKAWLR*VGLICSNLRTH
Trigger: ATGAGTCCTGAGATTGCTACAGATGAGACCCACCCATCGGAGCCAGGCTTTGAAGGAACTGACCGCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS CCA 72 bp TTCCTCATGCACACTGCGGTCAGTTCCTTCAAAGCCTaGCTCCGATGGGTGGGTCTCATCTGTAGCAATCTC +
Preference number: 6 (lower is better)
Translates to: FLMHTAVSSFKA*LRWVGLICSNL
Trigger: GAGATTGCTACAGATGAGACCCACCCATCGGAGCCAGGCTTTGAAGGAACTGACCGCAGTGTGCATGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS GCA 72 bp GGCGATTACTCAACTGGGGTCCTTTGTGACAGGATATaGTGCTGCGTGACTAATGGAGCTGGCTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: GDYSTGVLCDRI*CCVTNGAGFLL
Trigger: CAGGAGAAAGCCAGCTCCATTAGTCACGCAGCAGCATATCCTGTCACAAAGGACCCCAGTTGAGTAATCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478014.5
ENST00000553595.5
ENST00000554244.5
CDS GCA 72 bp CCCCCTTGCAGGCAGCTGTCAGGAAACCACAGAAGGTaGTTGAAGGCACACAAGAAATGGCTGGTTCTAATC +
Preference number: 6 (lower is better)
Translates to: PPCRQLSGNHRR*LKAHKKWLVLI
Trigger: GATTAGAACCAGCCATTTCTTGTGTGCCTTCAAGCACCTTCTGTGGTTTCCTGACAGCTGCCTGCAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554244.5
CDS CCA 72 bp CTGCGGTCAGTTCCTTCAAAGCCTGGCTCCGATGGGTaGGTCTCATCTGTAGCAATCTCAGGACTCATTTTC +
Preference number: 6 (lower is better)
Translates to: LRSVPSKPGSDG*VSSVAISGLIF
Trigger: GAAAATGAGTCCTGAGATTGCTACAGATGAGACCCACCCATCGGAGCCAGGCTTTGAAGGAACTGACCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488612.5
CDS CCA 72 bp GGTGGGAGGATTTCTGGAGCCCAGTTCAGTTCAGCTTaGGTGACAGAGCAAAATGTTGTCTCTCTACTCTGG +
Preference number: 6 (lower is better)
Translates to: GGRISGAQFSSA*VTEQNVVSLLW
Trigger: CCAGAGTAGAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGGGCTCCAGAAATCCTCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556251.1
CDS TCA 72 bp CATAAGCCGTTTGCATCTTTGGGGCACAGGCCCTGCTaGCCATACATAGAAGTTCATGGACACCTCGATAAC +
Preference number: 6 (lower is better)
Translates to: HKPFASLGHRPC*PYIEVHGHLDN
Trigger: GTTATCGAGGTGTCCATGAACTTCTATGTATGGTCAGCAGGGCCTGTGCCCCAAAGATGCAAACGGCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000390683.7
ENST00000471583.5
ENST00000479335.5
ENST00000485181.5
ENST00000487270.5
ENST00000487861.5
ENST00000488612.5
ENST00000553334.1
CDS TCA 72 bp GGAGGATTTCTGGAGCCCAGTTCAGTTCAGCTTGGGTaGCAGAGCAAAATGTTGTCTCTTGAAGAACCAGGC +
Preference number: 6 (lower is better)
Translates to: GGFLEPSSVQLG*QSKMLSLEEPG
Trigger: GCCTGGTTCTTCAAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGGGCTCCAGAAATCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS TCA 72 bp GGAGGATTTCTGGAGCCCAGTTCAGTTCAGCTTGGGTaGCAGAGCAAAATGTTGTCTCTCTACTCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: GGFLEPSSVQLG*QSKMLSLYSGG
Trigger: TCCACCAGAGTAGAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGGGCTCCAGAAATCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556251.1
CDS CCA 72 bp GCTCATCATTATACAAAACTGAGTTTTTCCACAACCTaGTGGACCTGTAATCTGGGTGCCTCCACGGGCCCT +
Preference number: 6 (lower is better)
Translates to: AHHYTKLSFSTT*WTCNLGASTGP
Trigger: AGGGCCCGTGGAGGCACCCAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CAA 72 bp AGGTGGGAGGATTTCTGGAGCCCAGTTCAGTTCAGCTaGGGTGACAGAGCAAAATGTTGTCTCTCTACTCTG +
Preference number: 6 (lower is better)
Translates to: RWEDFWSPVQFS*GDRAKCCLSTL
Trigger: CAGAGTAGAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGGGCTCCAGAAATCCTCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556251.1
CDS CCA 72 bp CATCATTATACAAAACTGAGTTTTTCCACAACCTGGTaGACCTGTAATCTGGGTGCCTCCACGGGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: HHYTKLSFSTTW*TCNLGASTGPS
Trigger: TGAAGGGCCCGTGGAGGCACCCAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555907.5
CDS CAA 72 bp CACAGCTCTTGTGATAAACCCACTCGTTTTAGTTTCTaGCTACCCATGCCGGGTCTGCAGCATCCAACTTTC +
Preference number: 6 (lower is better)
Translates to: HSSCDKPTRFSF*LPMPGLQHPTF
Trigger: GAAAGTTGGATGCTGCAGACCCGGCATGGGTAGCAAGAAACTAAAACGAGTGGGTTTATCACAAGAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390683.7
ENST00000471583.5
ENST00000479335.5
ENST00000487270.5
ENST00000487861.5
ENST00000488612.5
CDS CAA 72 bp AGGTGGGAGGATTTCTGGAGCCCAGTTCAGTTCAGCTaGGGTGACAGAGCAAAATGTTGTCTCTTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: RWEDFWSPVQFS*GDRAKCCLLKN
Trigger: GTTCTTCAAGAGACAACATTTTGCTCTGTCACCCAAGCTGAACTGAACTGGGCTCCAGAAATCCTCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487270.5
CDS GCA 72 bp GATAACCCACACTCTGAGAATTCCTGCACTAGACCGTaGTCTTTGATGGCAGGATCCACGTCTTATTTACCT +
Preference number: 6 (lower is better)
Translates to: DNPHSENSCTRP*SLMAGSTSYLP
Trigger: AGGTAAATAAGACGTGGATCCTGCCATCAAAGAGCACGGTCTAGTGCAGGAATTCTCAGAGTGTGGGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468382.5
CDS GCA 72 bp TGTGTGCCCATTGTCAGTGCCATGGTATCAAATCAGTaGCCATTGTCAGTGCCATGGTATCAAATCAGCTTA +
Preference number: 6 (lower is better)
Translates to: CVPIVSAMVSNQ*PLSVPWYQISL
Trigger: TAAGCTGATTTGATACCATGGCACTGACAATGGGCACTGATTTGATACCATGGCACTGACAATGGGCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460526.5
ENST00000469165.6
ENST00000554183.1
CDS CAA 72 bp CCACACTCTGAGAATTCCTGCACTAGACCGTGCTCTTaGATGGCAGGATCCACGTCTTATTTACCTTTGTAT +
Preference number: 6 (lower is better)
Translates to: PHSENSCTRPCS*MAGSTSYLPLY
Trigger: ATACAAAGGTAAATAAGACGTGGATCCTGCCATCAAAGAGCACGGTCTAGTGCAGGAATTCTCAGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468382.5
CDS TCA 72 bp CACACTCTGAGAATTCCTGCACTAGACCGTGCTCTTTaGTGGCAGGATCCACGTCTTATTTACCTTTGTATT +
Preference number: 6 (lower is better)
Translates to: HTLRIPALDRAL*WQDPRLIYLCI
Trigger: AATACAAAGGTAAATAAGACGTGGATCCTGCCATCAAAGAGCACGGTCTAGTGCAGGAATTCTCAGAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468382.5
CDS CCA 72 bp CATCATTATACAAAACTGAGTTTTTCCACAACCTGGTaGACCTGTAATCTCTGTGAGGGATCCACAAGCCAC +
Preference number: 6 (lower is better)
Translates to: HHYTKLSFSTTW*TCNLCEGSTSH
Trigger: GTGGCTTGTGGATCCCTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390683.7
ENST00000471583.5
ENST00000485181.5
ENST00000487270.5
ENST00000487861.5
ENST00000488612.5
CDS CCA 72 bp GCTCATCATTATACAAAACTGAGTTTTTCCACAACCTaGTGGACCTGTAATCTCTGTGAGGGATCCACAAGC +
Preference number: 6 (lower is better)
Translates to: AHHYTKLSFSTT*WTCNLCEGSTS
Trigger: GCTTGTGGATCCCTCACAGAGATTACAGGTCCACCAGGTTGTGGAAAAACTCAGTTTTGTATAATGATGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390683.7
ENST00000471583.5
ENST00000485181.5
ENST00000487270.5
ENST00000487861.5
ENST00000488612.5
CDS CCA 72 bp AAATGTAGATCTGGAAGTCGTGGTGAAAAACTAGGCTaGGTTACACTGGATGCTCATCCAAAGTCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: KCRSGSRGEKLG*VTLDAHPKSLF
Trigger: GAACAGAGACTTTGGATGAGCATCCAGTGTAACCCAGCCTAGTTTTTCACCACGACTTCCAGATCTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487861.5
CDS CAA 90 bp ACTAGACCGTGCTCTTTGATGGCAGGATCCACGTCTTATTTACCTTaGTATTCCCAGTTCATAGAACTGAGTCCAAGACATCACAAATGC +
Preference number: 6 (lower is better)
Translates to: TRPCSLMAGSTSYLP*YSQFIELSPRHHKC
Trigger: GCATTTGTGATGTCTTGGACTCAGTTCTATGAACTGGGAATACAAAGGTAAATAAGACGTGGATCCTGCCATCAAAGAGCACGGTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468382.5
CDS TCA 72 bp TGCCCATTGTCAGTGCCATGGTATCAAATCAGCTTATaGTGCAGATTACTGTTGGGCTTGTTCTTGATCCTA +
Preference number: 6 (lower is better)
Translates to: CPLSVPWYQISL*CRLLLGLFLIL
Trigger: TAGGATCAAGAACAAGCCCAACAGTAATCTGCATCATAAGCTGATTTGATACCATGGCACTGACAATGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460526.5
ENST00000469165.6
ENST00000554183.1
CDS GCA 72 bp TTTGGGGTGATGAAAATATTTGGAACTAGACAGAGATaGTGGTTGCACATCATGATATCTAGTTGCCACGGA +
Preference number: 6 (lower is better)
Translates to: FGVMKIFGTRQR*WLHIMISSCHG
Trigger: TCCGTGGCAACTAGATATCATGATGTGCAACCAGCATCTCTGTCTAGTTCCAAATATTTTCATCACCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469165.6
CDS CCA 72 bp GGGGTGATGAAAATATTTGGAACTAGACAGAGATGCTaGTTGCACATCATGATATCTAGTTGCCACGGAATT +
Preference number: 6 (lower is better)
Translates to: GVMKIFGTRQRC*LHIMISSCHGI
Trigger: AATTCCGTGGCAACTAGATATCATGATGTGCAACCAGCATCTCTGTCTAGTTCCAAATATTTTCATCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469165.6
CDS CAA 72 bp TGCTCTTTGATGGCAGGATCCACGTCTTATTTACCTTaGTATTCCCAGTTCATAGAACTGAGTCCAAGACAT +
Preference number: 6 (lower is better)
Translates to: CSLMAGSTSYLP*YSQFIELSPRH
Trigger: ATGTCTTGGACTCAGTTCTATGAACTGGGAATACAAAGGTAAATAAGACGTGGATCCTGCCATCAAAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468382.5
CDS TCA 72 bp TGTGAGATACATCCTCTAGAATTCCATGACTTAAGCTaGGTCTACACAGTAGCAACCAAATGTTTTAGCAGA +
Preference number: 6 (lower is better)
Translates to: CEIHPLEFHDLS*VYTVATKCFSR
Trigger: TCTGCTAAAACATTTGGTTGCTACTGTGTAGACTCAGCTTAAGTCATGGAATTCTAGAGGATGTATCTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460526.5
ENST00000469165.6
ENST00000554183.1
CDS CAA 72 bp GTGATGAAAATATTTGGAACTAGACAGAGATGCTGGTaGCACATCATGATATCTAGTTGCCACGGAATTGTT +
Preference number: 6 (lower is better)
Translates to: VMKIFGTRQRCW*HIMISSCHGIV
Trigger: AACAATTCCGTGGCAACTAGATATCATGATGTGCAACCAGCATCTCTGTCTAGTTCCAAATATTTTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469165.6