Pregenerated sensors for RAD51AP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000214842Ensembl transcript IDs: ENST00000399080.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAATCCGCGGCGTGGGCTaGGGGAGAGACATGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: HFIIKQAPNPQAGRTYIQIRGVG*GRDMTA Trigger: CGCTGTCATGTCTCTCCCTCAGCCCACGCCGCGGAT...TTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACACCGCTTGCTACTAGGTaGTTGGGAATCCGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTPLATR*LGIRVL Trigger: GAGGACCCGGATTCCCAACCACCTAGTAGCAAGCGG...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGGCTGAGGGAGAGACATaGCAGCGAATGGAAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: LYNKASPKPPSWKNIYPKAEGET*QRMERI Trigger: GATCCTTTCCATTCGCTGTCATGTCTCTCCCTCAGC...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCTGCTTCCCACTGACTaGTTTCTCCACACACGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SPLYNKASPKPPSWKNIYLLPTD*FLHTRV Trigger: GACTCGTGTGTGGAGAAATCAGTCAGTGGGAAGCAG...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATTACTGCGGTGCACACTaGAAGCCTCTCTGTCATGCA | + |
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Preference number: 4 (lower is better) Translates to: SPLYNKASPKPPSWKNIYYCGAH*KPLCHA Trigger: TGCATGACAGAGAGGCTTTCAGTGTGCACCGCAGTA...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | ATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGAAAAGTGCTGGGCAGAAGTTaGCTAACCCCTGCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IIKQAPNPQAGRTYIQRKVLGRS*LTPALE Trigger: CTCCAAAGCAGGGGTTAGTCAACTTCTGCCCAGCAC...TTTTCTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | CACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAATTGCTACTAGGTGGTTaGGAATCCGGGTCCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HFIIKQAPNPQAGRTYIQLLLGG*ESGSSG Trigger: TCCTGAGGACCCGGATTCCCAACCACCTAGTAGCAA...TTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCAAGCGGTCGTACTCTTaGAATGCCATGTGGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYIKRSYS*NAMWKV Trigger: CACTTTCCACATGGCATTTCAAGAGTACGACCGCTT...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGGAGCTATTACTGCGGTaGACACTGAAAGCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LYNKASPKPPSWKNIYPKELLLR*TLKASL Trigger: CAGAGAGGCTTTCAGTGTGCACCGCAGTAATAGCTC...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCGCTGGTATGGCCTGTTaGCTAACATTGCAGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYIAGMAC*LTLQRS Trigger: AGATCTCTGCAATGTTAGGCAACAGGCCATACCAGC...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCATATGTTGTGGCTTGCTaGTATGGCCTGTTGCCTAAC | + |
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Preference number: 4 (lower is better) Translates to: PLYNKASPKPPSWKNIYPYVVAC*YGLLPN Trigger: GTTAGGCAACAGGCCATACCAGCAAGCCACAACATA...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCTTGACAAACCAATCCTaGTTGGCCTACTGCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYILTNQS*LAYCMS Trigger: AGACATGCAGTAGGCCAATCAGGATTGGTTTGTCAA...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCAAGTTGACTAACCCCTaGTTTGGAGCTATTACTGCG | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYIKLTNP*FGAITA Trigger: CGCAGTAATAGCTCCAAAGCAGGGGTTAGTCAACTT...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCATGCCATGTGGAAAGTaGCTACCTCCTCTCAATAAA | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYIMPCGK*LPPLNK Trigger: TTTATTGAGAGGAGGTAGTCACTTTCCACATGGCAT...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCACTGTCCAGACATTCTaGTTCCTCCCAATTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYITVQTF*FLPICI Trigger: AATGCAAATTGGGAGGAAGCAGAATGTCTGGACAGT...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGTATTATGTTGTGGCTTaGTGGTATGGCCTGTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LYNKASPKPPSWKNIYPKYYVVA*WYGLLP Trigger: AGGCAACAGGCCATACCAGCAAGCCACAACATAATA...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAGCCCATATTAGGACCTaGTATAGTATCATGGAACGA | + |
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Preference number: 4 (lower is better) Translates to: PLYNKASPKPPSWKNIYPAHIRT*YSIMER Trigger: TCGTTCCATGATACTATAGCAGGTCCTAATATGGGC...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGTTACAGTCCCAGTTTTaGGATTTTTCCAGCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LYNKASPKPPSWKNIYPKLQSQF*DFSSLV Trigger: TACCAGGCTGGAAAAATCTCAAAACTGGGACTGTAA...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCATTAGCAGCTAAGTCCTaGAAACATTCATCATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PLYNKASPKPPSWKNIYPLAAKS*KHSSFP Trigger: AGGGAATGATGAATGTTTTCAGGACTTAGCTGCTAA...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACAAATCCTTGCTTTTCTTaGCAAACCAATCCTGATTGG | + |
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Preference number: 4 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTNPCFS*QTNPDW Trigger: CCAATCAGGATTGGTTTGTCAAGAAAAGCAAGGATT...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGATGGAACGAGGAAGATaGACGTATTTTGTTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: LYNKASPKPPSWKNIYPKMERGR*TYFVDH Trigger: GTGGTCAACAAAATACGTGCATCTTCCTCGTTCCAT...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATGTCGTACTCTTGAAATaGCATGTGGAAAGTGACTAC | + |
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Preference number: 4 (lower is better) Translates to: SPLYNKASPKPPSWKNIYVVLLK*HVESDY Trigger: GTAGTCACTTTCCACATGGCATTTCAAGAGTACGAC...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATTATGTATTATGTTGTaGCTTGCTGGTATGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTLCIML*LAGMAC Trigger: ACAGGCCATACCAGCAAGCCACAACATAATACATAA...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | ATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGAAAACCTGCTATAGTATCATaGAACGAGGAAGATGCACGT | + |
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Preference number: 4 (lower is better) Translates to: IIKQAPNPQAGRTYIQRKPAIVS*NEEDAR Trigger: ACGTGCATCTTCCTCGTTCCATGATACTATAGCAGG...TTTTCTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGCAAACCAATCCTGATTaGCCTACTGCATGTCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LYNKASPKPPSWKNIYPKQTNPD*PTACLK Trigger: CTTAAGACATGCAGTAGGCCAATCAGGATTGGTTTG...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATGAAAATAGCATTCGTTaGAACAAGGAGTCCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SPLYNKASPKPPSWKNIYENSIR*NKESLE Trigger: TTCAAGGGACTCCTTGTTTCAACGAATGCTATTTTC...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCAATGGATTTTCTTTGTaGACATTGTCTCTTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYINGFSL*TLSLPW Trigger: CCAAGGAAGAGACAATGTTCACAAAGAAAATCCATT...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCATTTTGGCTACTGAGTaGTGGGTAGTCATTTTCATA | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYIILATE*WVVIFI Trigger: TATGAAAATGACTACCCATCACTCAGTAGCCAAAAT...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCGGAAAACCTGTATTTTaGGTTGTCATACTGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYIGKPVF*VVILKE Trigger: TTCCTTCAGTATGACAACTCAAAATACAGGTTTTCC...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATCTGTGAAAATCCTTTaGATTAGCTATCTCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTSVKIL*ISYLPF Trigger: GAAAGGGAGATAGCTAATTCAAAGGATTTTCACAGA...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCTGTTTGTTTCCACAGTaGTTAGAAGTTCATTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LHFIIKQAPNPQAGRTYICLFPQ*LEVHFP Trigger: GGGAAAATGAACTTCTAAGCACTGTGGAAACAAACA...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACAACATTGTCTCTTCCTTaGACAAACTGTTGTTTTCGA | + |
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Preference number: 4 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTTLSLP*TNCCFR Trigger: TCGAAAACAACAGTTTGTCCAAGGAAGAGACAATGT...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATCTCTTACATTACACTaGATACTACTGCAGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTSLTLH*ILLQLQ Trigger: CTGTAACTGCAGTAGTATCCAGTGTAATGTAAGAGA...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | CACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAAGTATTTTGGCTACTaGGTGATGGGTAGTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: HFIIKQAPNPQAGRTYIQKYFGY*VMGSHF Trigger: AAAATGACTACCCATCACTCAGTAGCCAAAATACTT...TTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR TCA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCACAGTCAAAGTTACTaGTCTTATTATGTCCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SPLYNKASPKPPSWKNIYHSQSY*SYYVPV Trigger: AACAGGGACATAATAAGATCAGTAACTTTGACTGTG...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAATTCAGATTACATATCTaGTTCCCACTGACTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: HFIIKQAPNPQAGRTYIQFRLHI*FPLTDF Trigger: GAAATCAGTCAGTGGGAAGCAGATATGTAATCTGAA...TTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGTACACTGGATACTACTaGAGTTACAGTAGTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: LYNKASPKPPSWKNIYPKYTGYY*SYSSLN Trigger: GTTCAAACTACTGTAACTGCAGTAGTATCCAGTGTA...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR GCA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATAGACAGAGGACATTTTaGTATTTAAGTCCATTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SPLYNKASPKPPSWKNIYRQRTF*YLSPLE Trigger: TTCCAATGGACTTAAATAGCAAAATGTCCTCTGTCT...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CCA 90 bp | ATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGAAAAAGCTATCTCCCTTTCTaGCAAAATACTCTCATATTC | + |
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Preference number: 4 (lower is better) Translates to: IIKQAPNPQAGRTYIQRKSYLPF*QNTLIF Trigger: GAATATGAGAGTATTTTGCCAGAAAGGGAGATAGCT...TTTTCTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CCA 90 bp | ACACCTCCAGGCTCCTCAAGACAGAGCCGCTTGCTACTAGGTGGTTaGGAATCCGGGTCCTCAGGAGGCGTTAAAGAGGAGGTAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: TPPGSSRQSRLLLGG*ESGSSGGVKEEVGF Trigger: AAAGCCTACCTCCTCTTTAACGCCTCCTGAGGACCCGGATTCCCAACCACCTAGTAGCAAGCGGCTCTGTCTTGAGGAGCCTGGAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 90 bp | GCTTTGGAGCTATTACTGCGGTGCACACTGAAAGCCTCTCTGTCATaGAGGCCTGCCTCAGACCTTCCTGAAGCCCTCAAATCAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: ALELLLRCTLKASLS*RPASDLPEALKSES Trigger: TGATTCTGATTTGAGGGCTTCAGGAAGGTCTGAGGCAGGCCTGCATGACAGAGAGGCTTTCAGTGTGCACCGCAGTAATAGCTCCAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 90 bp | ATGTATATCGTGTATAGAGGTGCTGGGCAGAAGTTGACTAACCCCTaGTTTGGAGCTATTACTGCGGTGCACACTGAAAGCCTCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: MYIVYRGAGQKLTNP*FGAITAVHTESLSV Trigger: GACAGAGAGGCTTTCAGTGTGCACCGCAGTAATAGCTCCAAAGCAGGGGTTAGTCAACTTCTGCCCAGCACCTCTATACACGATATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 90 bp | TTTCTCCACACACGAGTCTGTGGAGTTATCGAAAATAGCATTCGTTaGAACAAGGAGTCCCTTGAAGGGTCTAGGGGACAACTCCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: FLHTRVCGVIENSIR*NKESLEGSRGQLPD Trigger: GTCTGGGAGTTGTCCCCTAGACCCTTCAAGGGACTCCTTGTTTCAACGAATGCTATTTTCGATAACTCCACAGACTCGTGTGTGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGCTTGCTACTAGGTGGTaGGGAATCCGGGTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LYNKASPKPPSWKNIYPKLATRW*GIRVLR Trigger: CCTGAGGACCCGGATTCCCAACCACCTAGTAGCAAG...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCTCAAGACAGAGCCGCTaGCTACTAGGTGGTTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LHFIIKQAPNPQAGRTYISRQSR*LLGGWE Trigger: TTCCCAACCACCTAGTAGCAAGCGGCTCTGTCTTGA...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATGAAACAAGGAGTCCCTaGAAGGGTCTAGGGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: SPLYNKASPKPPSWKNIYETRSP*KGLGDN Trigger: GTTGTCCCCTAGACCCTTCAAGGGACTCCTTGTTTC...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCATGCTGGTATGGCCTGTaGCCTAACATTGCAGAGATC | + |
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Preference number: 5 (lower is better) Translates to: PLYNKASPKPPSWKNIYPCWYGL*PNIAEI Trigger: GATCTCTGCAATGTTAGGCAACAGGCCATACCAGCA...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACAGTATTATGTTGTGGCTaGCTGGTATGGCCTGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTVLCCG*LVWPVA Trigger: GGCAACAGGCCATACCAGCAAGCCACAACATAATAC...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACAGTTACAGTCCCAGTTTaGAGATTTTTCCAGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTVTVPV*RFFQPG Trigger: ACCAGGCTGGAAAAATCTCAAAACTGGGACTGTAAC...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCTCATTATGTATTATGTaGTGGCTTGCTGGTATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHFIIKQAPNPQAGRTYISLCIM*WLAGMA Trigger: GGCCATACCAGCAAGCCACAACATAATACATAATGA...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 90 bp | GTCTCTTCATTATGTATTATGTTGTGGCTTGCTGGTATGGCCTGTTaGCTAACATTGCAGAGATCTTCAAATATGTGCTCACAGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSSLCIMLWLAGMAC*LTLQRSSNMCSQSK Trigger: CTTTGACTGTGAGCACATATTTGAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAATGAAGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CCA 90 bp | AGAAGTGGTATGGGTCTCTTCATTATGTATTATGTTGTGGCTTGCTaGTATGGCCTGTTGCCTAACATTGCAGAGATCTTCAAATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSGMGLFIMYYVVAC*YGLLPNIAEIFKYV Trigger: CACATATTTGAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAATGAAGAGACCCATACCACTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCATGCTATTTAAGTCCATaGGAAACTGAGGGACACTTA | + |
|
Preference number: 5 (lower is better) Translates to: PLYNKASPKPPSWKNIYPCYLSP*ETEGHL Trigger: TAAGTGTCCCTCAGTTTCCAATGGACTTAAATAGCA...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCATGTTCTTCATATGCATaGATGACTTTTGCACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLYNKASPKPPSWKNIYPCSSYA*MTFAQW Trigger: CCACTGTGCAAAAGTCATCAATGCATATGAAGAACA...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCACACATTCACAACTTGTaGAGGACAACTCATATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLYNKASPKPPSWKNIYPHIHNL*RTTHIL Trigger: CAGAATATGAGTTGTCCTCAACAAGTTGTGAATGTG...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | AAACTTCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATCCTTGGACAAACTGTaGTTTTCGATTCTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLLHFIIKQAPNPQAGRTSLDKL*FSILIS Trigger: AGAAATGAGAATCGAAAACAACAGTTTGTCCAAGGA...TGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGAACATTGTCTCTTCCTaGGACAAACTGTTGTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LYNKASPKPPSWKNIYPKNIVSS*DKLLFS Trigger: CGAAAACAACAGTTTGTCCAAGGAAGAGACAATGTT...CTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCAACATCAGGTCTATTTaGGGACCAGTAAATGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHFIIKQAPNPQAGRTYINIRSI*GPVNVC Trigger: ACAAACATTTACTGGTCCCAAAATAGACCTGATGTT...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAGATGCACGTATTTTGTaGACCACAACCATTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLYNKASPKPPSWKNIYPDARIL*TTTIFK Trigger: TTTGAAAATGGTTGTGGTCAACAAAATACGTGCATC...TGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAGAAGATGCACGTATTTaGTTGACCACAACCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFIIKQAPNPQAGRTYIQEDARI*LTTTIF Trigger: GAAAATGGTTGTGGTCAACAAAATACGTGCATCTTC...TTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | CTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCTCCTGTTCTCCATTATaGGGTACAGTTTTCCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LHFIIKQAPNPQAGRTYISCSPL*GTVFHL Trigger: TAAATGGAAAACTGTACCCAATAATGGAGAACAGGA...GATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | TCTCCACTTTATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCTCTTACGAGAAGCTTaGATTGTTCTTCATATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPLYNKASPKPPSWKNIYLLREA*IVLHMH Trigger: ATGCATATGAAGAACAATCAAAGCTTCTCGTAAGAG...ATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTATAAAGTGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS-3UTR CAA 90 bp | ATAATAAAGCAAGCCCCAAACCCCCAAGCTGGAAGAACATATATCCAAAGAAAATTCCACATTCACAACTaGTTGAGGACAACTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: IIKQAPNPQAGRTYIQRKFHIHN*LRTTHI Trigger: AATATGAGTTGTCCTCAACAAGTTGTGAATGTGGAA...TTTTCTTTGGATATATGTTCTTCCAGCTTGGGGGTTTGGGGCTTGCTTTATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 90 bp | AGAGTCTCTTACATTACACTGGATACTACTGCAGTTACAGTAGTTTaGACTGATCAAGTCTTTTCTCTTACAAGTATTTTGGCTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVSYITLDTTAVTVV*TDQVFSLTSILATE Trigger: CTCAGTAGCCAAAATACTTGTAAGAGAAAAGACTTGATCAGTTCAAACTACTGTAACTGCAGTAGTATCCAGTGTAATGTAAGAGACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 90 bp | TGTTCTCCATTATTGGGTACAGTTTTCCATTTAAATAAACTTTGGTaGCTTTTGCCCATATTAGGACCTGCTATAGTATCATGGAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSPLLGTVFHLNKLW*LLPILGPAIVSWNE Trigger: CTCGTTCCATGATACTATAGCAGGTCCTAATATGGGCAAAAGTCACCAAAGTTTATTTAAATGGAAAACTGTACCCAATAATGGAGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 90 bp | GTATCCTCGGTTGTTCTGTATAAATTGAGGACAAGAATTACCATGTaGTTTAACAGTACTAGAATTATAGTGAGCCCAATTTTCCACATT | + |
|
Preference number: 5 (lower is better) Translates to: VSSVVLYKLRTRITM*FNSTRIIVSPIFHI Trigger: AATGTGGAAAATTGGGCTCACTATAATTCTAGTACTGTTAAAGCACATGGTAATTCTTGTCCTCAATTTATACAGAACAACCGAGGATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 72 bp | GTAGGCTTTCTGAGCTCGGCCATCCGCGGCGTGGGCTaGGGGAGAGACATGACAGCGAATGGAAAGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGFLSSAIRGVG*GRDMTANGKDL Trigger: CAGATCCTTTCCATTCGCTGTCATGTCTCTCCCTCAGCCCACGCCGCGGATGGCCGAGCTCAGAAAGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 90 bp | CAGCCCGCCTTAAAGACACCTCCAGGCTCCTCAAGACAGAGCCGCTaGCTACTAGGTGGTTGGGAATCCGGGTCCTCAGGAGGCGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: QPALKTPPGSSRQSR*LLGGWESGSSGGVK Trigger: TTTAACGCCTCCTGAGGACCCGGATTCCCAACCACCTAGTAGCAAGCGGCTCTGTCTTGAGGAGCCTGGAGGTGTCTTTAAGGCGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CCA 72 bp | GGCTCCTCAAGACAGAGCCGCTTGCTACTAGGTGGTTaGGAATCCGGGTCCTCAGGAGGCGTTAAAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSSRQSRLLLGG*ESGSSGGVKEE Trigger: CTCCTCTTTAACGCCTCCTGAGGACCCGGATTCCCAACCACCTAGTAGCAAGCGGCTCTGTCTTGAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 72 bp | TTAAAGACACCTCCAGGCTCCTCAAGACAGAGCCGCTaGCTACTAGGTGGTTGGGAATCCGGGTCCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LKTPPGSSRQSR*LLGGWESGSSG Trigger: TCCTGAGGACCCGGATTCCCAACCACCTAGTAGCAAGCGGCTCTGTCTTGAGGAGCCTGGAGGTGTCTTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 72 bp | CTATTACTGCGGTGCACACTGAAAGCCTCTCTGTCATaGAGGCCTGCCTCAGACCTTCCTGAAGCCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLRCTLKASLS*RPASDLPEALK Trigger: TTTGAGGGCTTCAGGAAGGTCTGAGGCAGGCCTGCATGACAGAGAGGCTTTCAGTGTGCACCGCAGTAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 72 bp | GTGTATAGAGGTGCTGGGCAGAAGTTGACTAACCCCTaGTTTGGAGCTATTACTGCGGTGCACACTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VYRGAGQKLTNP*FGAITAVHTES Trigger: GCTTTCAGTGTGCACCGCAGTAATAGCTCCAAAGCAGGGGTTAGTCAACTTCTGCCCAGCACCTCTATACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 72 bp | GATTGGCCTACTGCATGTCTTAAGCGGTCGTACTCTTaGAATGCCATGTGGAAAGTGACTACCTCCTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: DWPTACLKRSYS*NAMWKVTTSSQ Trigger: TTGAGAGGAGGTAGTCACTTTCCACATGGCATTTCAAGAGTACGACCGCTTAAGACATGCAGTAGGCCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 72 bp | ACACGAGTCTGTGGAGTTATCGAAAATAGCATTCGTTaGAACAAGGAGTCCCTTGAAGGGTCTAGGGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: TRVCGVIENSIR*NKESLEGSRGQ Trigger: TTGTCCCCTAGACCCTTCAAGGGACTCCTTGTTTCAACGAATGCTATTTTCGATAACTCCACAGACTCGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 90 bp | ATTTCTAATTCCATGTATATCGTGTATAGAGGTGCTGGGCAGAAGTaGACTAACCCCTGCTTTGGAGCTATTACTGCGGTGCACACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ISNSMYIVYRGAGQK*TNPCFGAITAVHTE Trigger: TTCAGTGTGCACCGCAGTAATAGCTCCAAAGCAGGGGTTAGTCAACTTCTGCCCAGCACCTCTATACACGATATACATGGAATTAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 72 bp | ATGTTGTGGCTTGCTGGTATGGCCTGTTGCCTAACATaGCAGAGATCTTCAAATATGTGCTCACAGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: MLWLAGMACCLT*QRSSNMCSQSK Trigger: CTTTGACTGTGAGCACATATTTGAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CCA 72 bp | ATGGGTCTCTTCATTATGTATTATGTTGTGGCTTGCTaGTATGGCCTGTTGCCTAACATTGCAGAGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MGLFIMYYVVAC*YGLLPNIAEIF Trigger: GAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAATGAAGAGACCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 72 bp | GATTTGAGCATTTCAGATTACATATCTGCTTCCCACTaGCTGATTTCTCCACACACGAGTCTGTGGAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: DLSISDYISASH*LISPHTSLWSY Trigger: ATAACTCCACAGACTCGTGTGTGGAGAAATCAGTCAGTGGGAAGCAGATATGTAATCTGAAATGCTCAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 72 bp | ATAGAAGTGGTATGGGTCTCTTCATTATGTATTATGTaGTGGCTTGCTGGTATGGCCTGTTGCCTAACATTG | + |
|
Preference number: 6 (lower is better) Translates to: IEVVWVSSLCIM*WLAGMACCLTL Trigger: CAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAATGAAGAGACCCATACCACTTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 90 bp | GGTCTCTTCATTATGTATTATGTTGTGGCTTGCTGGTATGGCCTGTaGCCTAACATTGCAGAGATCTTCAAATATGTGCTCACAGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLFIMYYVVACWYGL*PNIAEIFKYVLTVK Trigger: TTTGACTGTGAGCACATATTTGAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAATGAAGAGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 90 bp | TTATGTATTATGTTGTGGCTTGCTGGTATGGCCTGTTGCCTAACATaGCAGAGATCTTCAAATATGTGCTCACAGTCAAAGTTACTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LCIMLWLAGMACCLT*QRSSNMCSQSKLLI Trigger: GATCAGTAACTTTGACTGTGAGCACATATTTGAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 72 bp | TTATGTATTATGTTGTGGCTTGCTGGTATGGCCTGTTaGCTAACATTGCAGAGATCTTCAAATATGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LCIMLWLAGMAC*LTLQRSSNMCS Trigger: TGAGCACATATTTGAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 72 bp | ATTATGTATTATGTTGTGGCTTGCTGGTATGGCCTGTaGCCTAACATTGCAGAGATCTTCAAATATGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IMYYVVACWYGL*PNIAEIFKYVL Trigger: GAGCACATATTTGAAGATCTCTGCAATGTTAGGCAACAGGCCATACCAGCAAGCCACAACATAATACATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 90 bp | TCCTCTATTTCTTCTCAAAATATGTCTAACGTTACAGTCCCAGTTTaGAGATTTTTCCAGCCTGGTAAGTACGTAACTGTCCAGACATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSISSQNMSNVTVPV*RFFQPGKYVTVQTF Trigger: GAATGTCTGGACAGTTACGTACTTACCAGGCTGGAAAAATCTCAAAACTGGGACTGTAACGTTAGACATATTTTGAGAAGAAATAGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS GCA 72 bp | ATTAGGACCTGCTATAGTATCATGGAACGAGGAAGATaGACGTATTTTGTTGACCACAACCATTTTCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: IRTCYSIMERGR*TYFVDHNHFQI Trigger: GATTTGAAAATGGTTGTGGTCAACAAAATACGTGCATCTTCCTCGTTCCATGATACTATAGCAGGTCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 72 bp | TCTTCTCAAAATATGTCTAACGTTACAGTCCCAGTTTaGAGATTTTTCCAGCCTGGTAAGTACGTAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSQNMSNVTVPV*RFFQPGKYVTV Trigger: GACAGTTACGTACTTACCAGGCTGGAAAAATCTCAAAACTGGGACTGTAACGTTAGACATATTTTGAGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS TCA 72 bp | TACACTGGATACTACTGCAGTTACAGTAGTTTGAACTaGTCAAGTCTTTTCTCTTACAAGTATTTTGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: YTGYYCSYSSLN*SSLFSYKYFGY Trigger: GTAGCCAAAATACTTGTAAGAGAAAAGACTTGATCAGTTCAAACTACTGTAACTGCAGTAGTATCCAGTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 72 bp | GCTATAGTATCATGGAACGAGGAAGATGCACGTATTTaGTTGACCACAACCATTTTCAAATCTTTTTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: AIVSWNEEDARI*LTTTIFKSFSI Trigger: GATAGAAAAAGATTTGAAAATGGTTGTGGTCAACAAAATACGTGCATCTTCCTCGTTCCATGATACTATAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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| CDS CAA 72 bp | AGAATTATAGTGAGCCCAATTTTCCACATTCACAACTaGTTGAGGACAACTCATATTCTGACAAGTAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: RIIVSPIFHIHN*LRTTHILTSNF Trigger: GAAATTACTTGTCAGAATATGAGTTGTCCTCAACAAGTTGTGAATGTGGAAAATTGGGCTCACTATAATTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399080.2 |
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