Pregenerated sensors for RAD51AP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000111247Ensembl transcript IDs: ENST00000398012.7, ENST00000442992.6, ENST00000535558.5, ENST00000538817.5, ENST00000544173.5, ENST00000544927.5, ENST00000544931.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCATCTAAAGCCATCCTGTATATCTGGCTTCTTTCACTCAGAATaGTGTTTCCAAGGTTCATCCATATTGCAGTATATATCAGTTATC | + |
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Preference number: 1 (lower is better) Translates to: CHLKPSCISGFFHSE*CFQGSSILQYISVI Trigger: GATAACTGATATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCAGATATACAGGATGGCTTTAGATGACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544173.5 |
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| 3UTR-3UTR GCA 90 bp | GACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCTGGTCTACCACCAGTGGGCTaGTGCTACTTCTGCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: DTTTSGLLLLLLPPDAAGLPPVG*CYFCYL Trigger: GAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAG...ACCAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| 3UTR-3UTR GCA 90 bp | CACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCCACTATCACCATCACTaGCTTCCAGAAGAATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HRHYHQWAAATSATSRCRHYHHH*LPEESS Trigger: GGAAGATTCTTCTGGAAGGCAGTGATGGTGATAGTG...GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCGCTTTTCTTTTCCCTTaGACACCACCAACATCATCT | + |
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Preference number: 2 (lower is better) Translates to: HRHYHQWAAATSATSRCRAFLFP*TPPTSS Trigger: AGATGATGTTGGTGGTGTTCAAGGGAAAAGAAAAGC...GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| 3UTR-3UTR TCA 90 bp | CAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGGCTTTTCTTTTCCCTTaGACACCACCAACATCATCT | + |
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Preference number: 2 (lower is better) Translates to: QTLPPVGCCYFCYLQMPQAFLFP*TPPTSS Trigger: AGATGATGTTGGTGGTGTTCAAGGGAAAAGAAAAGC...CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAACCAGGTGCAAAGTCTaGTTCAGTGTCATTAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: GDFTDTTTSGLLLLLLPPTRCKV*FSVIST Trigger: AGTGCTAATGACACTGAACCAGACTTTGCACCTGGT...TGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCCACTATCACCATCACTaGCTTCCAGAAGAATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: IGRLHRHYHQWAAATSATHYHHH*LPEESS Trigger: GGAAGATTCTTCTGGAAGGCAGTGATGGTGATAGTG...GGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCATATGCCATACCTGGTaGGACCCATTTAGGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: IGRLHRHYHQWAAATSATICHTW*DPFRFL Trigger: AAGAAACCTAAATGGGTCCCACCAGGTATGGCATAT...GGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTTTCCTAGTGGTATCTaGAGACAGAGAAACCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IGRLHRHYHQWAAATSATFPSGI*RQRNLF Trigger: AAAAAGGTTTCTCTGTCTTCAGATACCACTAGGAAA...GGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAAACCAGGTGCAAAGTCTaGTTCAGTGTCATTAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LPPDAAVIIFQAPVLDDKTRCKV*FSVIST Trigger: AGTGCTAATGACACTGAACCAGACTTTGCACCTGGT...TTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| 3UTR-3UTR TCA 90 bp | CTACCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAAGAAAAGAACAGCATGTaGTGTGGACTTCATGTCGAA | + |
|
Preference number: 2 (lower is better) Translates to: LPPDAAVIIFQAPVLDDKEKNSM*CGLHVE Trigger: TTCGACATGAAGTCCACATCACATGCTGTTCTTTTC...TTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535558.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAATATCACTATCACCATCACTaGCTTCCAGAAGAATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PPDAAVIIFQAPVLDDKYHYHHH*LPEESS Trigger: GGAAGATTCTTCTGGAAGGCAGTGATGGTGATAGTG...ATATTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| 3UTR GCA 72 bp | TGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTaGTACTTCTGCTACCTCCAGATGCCGCTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: WETSQTLPPVGC*YFCYLQMPLVG Trigger: TCCCACCAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| 3UTR GCA 72 bp | GATTGGGAGACTTCACAGACACTACCACCAGTGGGCTaGTGCTACTTCTGCTACCTCCAGATGCCGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DWETSQTLPPVG*CYFCYLQMPLV Trigger: CACCAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| 3UTR CCA 72 bp | ACTCTGATTGGGAGACTTCACAGACACTACCACCAGTaGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGC | + |
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Preference number: 3 (lower is better) Translates to: TLIGRLHRHYHQ*AAATSATSRCR Trigger: GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAATCAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| 3UTR-3UTR CAA 90 bp | CAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGTCCAAGCTCCTGTCCTaGATGATAAATATGCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: QTLPPVGCCYFCYLQMPQSKLLS*MINMPY Trigger: GTATGGCATATTTATCATCAAGGACAGGAGCTTGGA...CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCATCCAAGCTCCTGTCCTaGATGATAAATATGCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: GDFTDTTTSGLLLLLLPPSKLLS*MINMPY Trigger: GTATGGCATATTTATCATCAAGGACAGGAGCTTGGA...TGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR GCA 90 bp | CAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGGGCTGCTGCTACTTCTaGTACCTCCAGATGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTLPPVGCCYFCYLQMPQGCCYF*YLQMPQ Trigger: CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCC...CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR TCA 90 bp | CAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGCCAAGGCGGAGACTCTaGTTGGGAGACTTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTLPPVGCCYFCYLQMPQPRRRL*LGDFTD Trigger: GTCTGTGAAGTCTCCCAATCAGAGTCTCCGCCTTGG...CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR TCA 90 bp | CACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCCCAAGGCGGAGACTCTaGTTGGGAGACTTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRHYHQWAAATSATSRCRPRRRL*LGDFTD Trigger: GTCTGTGAAGTCTCCCAATCAGAGTCTCCGCCTTGG...GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | CAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGTCACAGGCCGCACCATaGTCCCTTTCAAGGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLPPVGCCYFCYLQMPQSQAAP*SLSRLG Trigger: ACCAAGCCTTGAAAGGGACCATGGTGCGGCCTGTGA...CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | CAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGAGACACTACCACCAGTaGGCTGCTGCTACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLPPVGCCYFCYLQMPQRHYHQ*AAATSA Trigger: AGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCT...CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | CACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGACACTACCACCAGTaGGCTGCTGCTACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRHYHQWAAATSATSRCRRHYHQ*AAATSA Trigger: AGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCT...GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | GGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAACCTCCAGATGCCGCTaGTGGGACCCATTTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: GDFTDTTTSGLLLLLLPPTSRCR*WDPFRF Trigger: AAACCTAAATGGGTCCCACCAGCGGCATCTGGAGGT...TGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR TCA 90 bp | GACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCTGGTTCAGGAACACGTGGATaGGTGGTATCAAGAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: DTTTSGLLLLLLPPDAAGSGTRG*VVSRKR Trigger: CCTTTTTCTTGATACCACTCATCCACGTGTTCCTGA...ACCAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR TCA 90 bp | CACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCGAAAAGAACAGCATGTaGTGTGGACTTCATGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: HRHYHQWAAATSATSRCREKNSM*CGLHVE Trigger: TTCGACATGAAGTCCACATCACATGCTGTTCTTTTC...GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR TCA 90 bp | CACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGAGTGGTCAAACTGTaGGTAATTGACTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: HRHYHQWAAATSATSRCRRVVKL*VIDWFL Trigger: AAGAAACCAGTCAATTACTCACAGTTTGACCACTCT...GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR GCA 90 bp | GACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCTGGTCTTTGTACAAGGCACTaGACTAGCTGGAATACTAAA | + |
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Preference number: 4 (lower is better) Translates to: DTTTSGLLLLLLPPDAAGLCTRH*TSWNTK Trigger: TTTAGTATTCCAGCTAGTGCAGTGCCTTGTACAAAG...ACCAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR GCA 90 bp | GGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCACACTATCACCATCACTaGCTTCCAGAAGAATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDFTDTTTSGLLLLLLPPHYHHH*LPEESS Trigger: GGAAGATTCTTCTGGAAGGCAGTGATGGTGATAGTG...TGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR TCA 90 bp | GGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGAAAAGAACAGCATGTaGTGTGGACTTCATGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDFTDTTTSGLLLLLLPPEKNSM*CGLHVE Trigger: TTCGACATGAAGTCCACATCACATGCTGTTCTTTTC...TGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | CAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCAGGTCCCTTTCAAGGCTTaGTATTTACAGTTCTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QTLPPVGCCYFCYLQMPQVPFKA*YLQFSN Trigger: ATTTGAGAACTGTAAATACCAAGCCTTGAAAGGGAC...CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR TCA 90 bp | ATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCGCTTTTCTTTTCCCTTaGACACCACCAACATCATCT | + |
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Preference number: 4 (lower is better) Translates to: IGRLHRHYHQWAAATSATAFLFP*TPPTSS Trigger: AGATGATGTTGGTGGTGTTCAAGGGAAAAGAAAAGC...GGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR GCA 90 bp | CCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAATATGGCTGCTGCTACTTCTaGTACCTCCAGATGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PPDAAVIIFQAPVLDDKYGCCYF*YLQMPQ Trigger: CTGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCC...ATATTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | CACTGCACTAGCTGGAATACTAAAAGTACCTTCAGGGAGTCTGTATATCTGGCTTCACAGGCCGCACCATaGTCCCTTTCAAGGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: HCTSWNTKSTFRESVYLASQAAP*SLSRLG Trigger: ACCAAGCCTTGAAAGGGACCATGGTGCGGCCTGTGA...AGCCAGATATACAGACTCCCTGAAGGTACTTTTAGTATTCCAGCTAGTGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000538817.5 |
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| CDS-3UTR TCA 90 bp | ATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCAGAGTGGTCAAACTGTaGGTAATTGACTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IGRLHRHYHQWAAATSATRVVKL*VIDWFL Trigger: AAGAAACCAGTCAATTACTCACAGTTTGACCACTCT...GGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR GCA 90 bp | CCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAATATCTACCACCAGTGGGCTaGTGCTACTTCTGCTACCTC | + |
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Preference number: 4 (lower is better) Translates to: PPDAAVIIFQAPVLDDKYLPPVG*CYFCYL Trigger: GAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAG...ATATTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR GCA 90 bp | AAAAGTACCTTCAGGGAGTCTGTATATCTGGCTTCTTTCACTCAGAATGATGTTGGCTGCTGCTACTTCTaGTACCTCCAGATGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSTFRESVYLASFTQNDVGCCYF*YLQMPL Trigger: CAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCC...AACATCATTCTGAGTGAAAGAAGCCAGATATACAGACTCCCTGAAGGTACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR CCA 90 bp | ATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCGTCCCTTTCAAGGCTTaGTATTTACAGTTCTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: IGRLHRHYHQWAAATSATVPFKA*YLQFSN Trigger: ATTTGAGAACTGTAAATACCAAGCCTTGAAAGGGAC...GGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398012.7 ENST00000442992.6 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | TCTAAAGCCATCTTTGTACAAGGCACTGCACTAGCTGGAATACTAAAAGTACCTAGACACTACCACCAGTaGGCTGCTGCTACTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKAIFVQGTALAGILKVPRHYHQ*AAATSA Trigger: AGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCT...AGGTACTTTTAGTATTCCAGCTAGTGCAGTGCCTTGTACAAAGATGGCTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR TCA 90 bp | TGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATCCAAGGCGGAGACTCTaGTTGGGAGACTTCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: WLLSLRMMFPRFIHIAVYPRRRL*LGDFTD Trigger: GTCTGTGAAGTCTCCCAATCAGAGTCTCCGCCTTGG...ATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR GCA 90 bp | CTACCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAACACTATCACCATCACTaGCTTCCAGAAGAATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPPDAAVIIFQAPVLDDKHYHHH*LPEESS Trigger: GGAAGATTCTTCTGGAAGGCAGTGATGGTGATAGTG...TTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR GCA 90 bp | CACTGCACTAGCTGGAATACTAAAAGTACCTTCAGGGAGTCTGTATATCTGGCTCACTATCACCATCACTaGCTTCCAGAAGAATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HCTSWNTKSTFRESVYLAHYHHH*LPEESS Trigger: GGAAGATTCTTCTGGAAGGCAGTGATGGTGATAGTG...AGCCAGATATACAGACTCCCTGAAGGTACTTTTAGTATTCCAGCTAGTGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR GCA 90 bp | GCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATATCTACCACCAGTGGGCTaGTGCTACTTCTGCTACCTC | + |
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Preference number: 4 (lower is better) Translates to: ASFTQNDVSKVHPYCSIYLPPVG*CYFCYL Trigger: GAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAG...ATATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR CCA 90 bp | GTACAAGGCACTGCACTAGCTGGAATACTAAAAGTACCTTCAGGGAGTCTGTATAGGCACTGCACTAGCTaGAATACTAAAAGTACCTTC | + |
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Preference number: 4 (lower is better) Translates to: VQGTALAGILKVPSGSLYRHCTS*NTKSTF Trigger: GAAGGTACTTTTAGTATTCCAGCTAGTGCAGTGCCT...ATACAGACTCCCTGAAGGTACTTTTAGTATTCCAGCTAGTGCAGTGCCTTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000538817.5 |
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| CDS-3UTR CCA 90 bp | CTACCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAAATATGCCATACCTGGTaGGACCCATTTAGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPPDAAVIIFQAPVLDDKICHTW*DPFRFL Trigger: AAGAAACCTAAATGGGTCCCACCAGGTATGGCATAT...TTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR TCA 90 bp | CTACCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAAAGAGTGGTCAAACTGTaGGTAATTGACTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPPDAAVIIFQAPVLDDKRVVKL*VIDWFL Trigger: AAGAAACCAGTCAATTACTCACAGTTTGACCACTCT...TTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR CCA 90 bp | TCTAAAGCCATCTTTGTACAAGGCACTGCACTAGCTGGAATACTAAAAGTACCTACCAGGTGCAAAGTCTaGTTCAGTGTCATTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: SKAIFVQGTALAGILKVPTRCKV*FSVIST Trigger: AGTGCTAATGACACTGAACCAGACTTTGCACCTGGT...AGGTACTTTTAGTATTCCAGCTAGTGCAGTGCCTTGTACAAAGATGGCTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR CCA 90 bp | AATACTAAAAGTACCTTCAGGGAGTCTGTATATCTGGCTTCTTTCACTCAGAATTCCAGATGCCGCTGGTaGGACCCATTTAGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NTKSTFRESVYLASFTQNSRCRW*DPFRFL Trigger: AAGAAACCTAAATGGGTCCCACCAGCGGCATCTGGA...ATTCTGAGTGAAAGAAGCCAGATATACAGACTCCCTGAAGGTACTTTTAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR CCA 90 bp | CCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAATATATATGCCATACCTGGTaGGACCCATTTAGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PPDAAVIIFQAPVLDDKYICHTW*DPFRFL Trigger: AAGAAACCTAAATGGGTCCCACCAGGTATGGCATAT...ATATTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR GCA 90 bp | GCTGGAATACTAAAAGTACCTTCAGGGAGTCTGTATATCTGGCTTCTTTCACTCCTTTGTACAAGGCACTaGACTAGCTGGAATACTAAA | + |
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Preference number: 4 (lower is better) Translates to: AGILKVPSGSLYIWLLSLLCTRH*TSWNTK Trigger: TTTAGTATTCCAGCTAGTGCAGTGCCTTGTACAAAG...GAGTGAAAGAAGCCAGATATACAGACTCCCTGAAGGTACTTTTAGTATTCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000538817.5 |
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| CDS-3UTR CCA 90 bp | TGGAATACTAAAAGTACCTTCAGGGAGTCTGTATATCTGGCTTCTTTCACTCAGAGGCACTGCACTAGCTaGAATACTAAAAGTACCTTC | + |
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Preference number: 4 (lower is better) Translates to: WNTKSTFRESVYLASFTQRHCTS*NTKSTF Trigger: GAAGGTACTTTTAGTATTCCAGCTAGTGCAGTGCCT...CTGAGTGAAAGAAGCCAGATATACAGACTCCCTGAAGGTACTTTTAGTATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000538817.5 |
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| CDS-3UTR TCA 90 bp | CCTCCAGATGCCGCAGTGATAATTTTCCAAGCTCCTGTCCTTGATGATAAATATTTTCCTAGTGGTATCTaGAGACAGAGAAACCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: PPDAAVIIFQAPVLDDKYFPSGI*RQRNLF Trigger: AAAAAGGTTTCTCTGTCTTCAGATACCACTAGGAAA...ATATTTATCATCAAGGACAGGAGCTTGGAAAATTATCACTGCGGCATCTGGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR TCA 90 bp | ATACTAAAAGTACCTTCAGGGAGTCTGTATATCTGGCTTCTTTCACTCAGAATGAGAGTGGTCAAACTGTaGGTAATTGACTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ILKVPSGSLYIWLLSLRMRVVKL*VIDWFL Trigger: AAGAAACCAGTCAATTACTCACAGTTTGACCACTCT...CATTCTGAGTGAAAGAAGCCAGATATACAGACTCCCTGAAGGTACTTTTAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000538817.5 |
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| CDS-3UTR TCA 90 bp | TGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATGCTTTTCTTTTCCCTTaGACACCACCAACATCATCT | + |
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Preference number: 4 (lower is better) Translates to: WLLSLRMMFPRFIHIAVYAFLFP*TPPTSS Trigger: AGATGATGTTGGTGGTGTTCAAGGGAAAAGAAAAGC...ATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000544173.5 |
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| CDS-3UTR CCA 90 bp | TGGAATACTAAAAGTACCTTCAGGGAGTCTGTATATCTGGCTTCTTTCACTCAGGTCCCTTTCAAGGCTTaGTATTTACAGTTCTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: WNTKSTFRESVYLASFTQVPFKA*YLQFSN Trigger: ATTTGAGAACTGTAAATACCAAGCCTTGAAAGGGAC...CTGAGTGAAAGAAGCCAGATATACAGACTCCCTGAAGGTACTTTTAGTATTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR CCA 90 bp | TATATCTGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGAACACGTGGATGAGTaGTATCAAGAAAAAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: YIWLLSLRMMFPRFIHIAEHVDE*YQEKGH Trigger: ATGCCCTTTTTCTTGATACCACTCATCCACGTGTTC...TGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCAGATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR CCA 90 bp | TGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATGGGAGTCTGTATATCTaGCTTCTTTCACTCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: WLLSLRMMFPRFIHIAVYGSLYI*LLSLRM Trigger: CATTCTGAGTGAAAGAAGCCAGATATACAGACTCCC...ATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000538817.5 |
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| CDS-3UTR CCA 90 bp | TGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATGCCATCCTGTATATCTaGCTTCTTTCACTCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: WLLSLRMMFPRFIHIAVYAILYI*LLSLRM Trigger: CATTCTGAGTGAAAGAAGCCAGATATACAGGATGGC...ATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544173.5 |
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| CDS-3UTR CCA 90 bp | TGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATACAATCAGGAACACGTaGATGAGTGGTATCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: WLLSLRMMFPRFIHIAVYTIRNT*MSGIKK Trigger: TTTCTTGATACCACTCATCCACGTGTTCCTGATTGT...ATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS-3UTR CCA 90 bp | GCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATATGGGAGTCTGTATATCTaGCTTCTTTCACTCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: ASFTQNDVSKVHPYCSIYGSLYI*LLSLRM Trigger: CATTCTGAGTGAAAGAAGCCAGATATACAGACTCCC...ATATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442992.6 ENST00000538817.5 |
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| CDS-3UTR TCA 90 bp | GCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATATAGAGTGGTCAAACTGTaGGTAATTGACTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ASFTQNDVSKVHPYCSIYRVVKL*VIDWFL Trigger: AAGAAACCAGTCAATTACTCACAGTTTGACCACTCT...ATATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000442992.6 ENST00000538817.5 ENST00000544173.5 |
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| CDS-3UTR TCA 90 bp | GCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTGCAGTATATATTTTCCTAGTGGTATCTaGAGACAGAGAAACCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: ASFTQNDVSKVHPYCSIYFPSGI*RQRNLF Trigger: AAAAAGGTTTCTCTGTCTTCAGATACCACTAGGAAA...ATATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS GCA 90 bp | GACTCTGATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTaGTACTTCTGCTACCTCCAGATGCCGCCAAAGCATTACATTTGG | + |
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Preference number: 5 (lower is better) Translates to: DSDWETSQTLPPVGC*YFCYLQMPPKHYIW Trigger: CCAAATGTAATGCTTTGGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAATCAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544931.1 |
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| CDS-3UTR CAA 90 bp | CACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATGCCGCTCCAAGCTCCTGTCCTaGATGATAAATATGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: HRHYHQWAAATSATSRCRSKLLS*MINMPY Trigger: GTATGGCATATTTATCATCAAGGACAGGAGCTTGGA...GCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS-3UTR CAA 90 bp | ATTGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAAGCTCCTGTCCTaGATGATAAATATGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: IGRLHRHYHQWAAATSATSKLLS*MINMPY Trigger: GTATGGCATATTTATCATCAAGGACAGGAGCTTGGA...GGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398012.7 ENST00000535558.5 |
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| CDS GCA 90 bp | AGACACTACCACCAGTGGGCTGCTGCTACTTCTGCTACCTCCAGATaGCGCTTCACTTCTTTCTTTTTAATTTCTTTAACTTTACTTTTT | + |
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Preference number: 5 (lower is better) Translates to: RHYHQWAAATSATSR*RFTSFFLISLTLLF Trigger: AAAAAGTAAAGTTAAAGAAATTAAAAAGAAAGAAGTGAAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544927.5 |
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| CDS GCA 90 bp | CTGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTaGAGTATATATCAGTTATCAGTTGTCATTTCTTTCTATGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LASFTQNDVSKVHPY*SIYQLSVVISFYGS Trigger: AGAGCCATAGAAAGAAATGACAACTGATAACTGATATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442992.6 |
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| CDS GCA 90 bp | CTGGCTTCTTTCACTCAGAATGATGTTTCCAAGGTTCATCCATATTaGAGTATATATCAGTTATCAGTTGTCATTTCTTTCTATGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LASFTQNDVSKVHPY*SIYQLSVVISFYGF Trigger: AAAGCCATAGAAAGAAATGACAACTGATAACTGATATATACTGCAATATGGATGAACCTTGGAAACATCATTCTGAGTGAAAGAAGCCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538817.5 ENST00000544173.5 |
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| CDS GCA 72 bp | TGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTaGTACTTCTGCTACCTCCAGATGCCGCTTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: WETSQTLPPVGC*YFCYLQMPLHF Trigger: GAAGTGAAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544927.5 |
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| CDS GCA 72 bp | GATTGGGAGACTTCACAGACACTACCACCAGTGGGCTaGTGCTACTTCTGCTACCTCCAGATGCCGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: DWETSQTLPPVG*CYFCYLQMPLH Trigger: GTGAAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544927.5 |
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| CDS GCA 72 bp | TGGGAGACTTCACAGACACTACCACCAGTGGGCTGCTaGTACTTCTGCTACCTCCAGATGCCGCCAAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: WETSQTLPPVGC*YFCYLQMPPKH Trigger: ATGCTTTGGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544931.1 |
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| CDS GCA 72 bp | GATTGGGAGACTTCACAGACACTACCACCAGTGGGCTaGTGCTACTTCTGCTACCTCCAGATGCCGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DWETSQTLPPVG*CYFCYLQMPPK Trigger: CTTTGGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGAAGTCTCCCAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544931.1 |
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| CDS GCA 72 bp | TCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTaGTACCTCCAGATGCCGCCAAAGCATTACATTTGG | + |
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Preference number: 6 (lower is better) Translates to: SQTLPPVGCCYF*YLQMPPKHYIW Trigger: CCAAATGTAATGCTTTGGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544931.1 |
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| CDS GCA 72 bp | TCACAGACACTACCACCAGTGGGCTGCTGCTACTTCTaGTACCTCCAGATGCCGCTTCACTTCTTTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SQTLPPVGCCYF*YLQMPLHFFLF Trigger: AAAAAGAAAGAAGTGAAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAGTGTCTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544927.5 |
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