RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAD51 (Homo sapiens)

Ensembl gene IDs: ENSG00000051180

Ensembl transcript IDs: ENST00000267868.8, ENST00000382643.7, ENST00000423169.6, ENST00000525066.5, ENST00000526763.6, ENST00000527860.5, ENST00000531277.2, ENST00000532743.6, ENST00000533741.1, ENST00000557850.5, ENST00000645673.2

Found 515 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGT +
Preference number: 1 (lower is better)
Translates to: SQKHPQKPGQVHLPG*KLTSTRVVCSVKGG
Trigger: ACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR CCA 90 bp CTACACCAAACTCATCAGCGAGTCGCAGAAGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGT +
Preference number: 1 (lower is better)
Translates to: LHQTHQRVAEASAET*PSASAWLKAHLDPS
Trigger: ACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGTTTGGTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR CCA 90 bp ACTGCCAGAGAGACCATACCTCTCAGCCACTGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGTGTCAATGTACATGGCCTTTCCTTC +
Preference number: 1 (lower is better)
Translates to: TARETIPLSHCQQPF*PKGTLSVNVHGLSF
Trigger: GAAGGAAAGGCCATGTACATTGACACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTATGGTCTCTCTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR GCA 90 bp GGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGGAA +
Preference number: 1 (lower is better)
Translates to: GSHNRKRPVENPREQ*TLIRLQHLRFLTEE
Trigger: TTCCTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR TCA 90 bp TCATGGCTGATGCTTGATAAAGGAGCTGGGTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTACATTATCCAGGACATCACTGCCAG +
Preference number: 1 (lower is better)
Translates to: SWLMLDKGAGSGGLC*TLEHMLHYPGHHCQ
Trigger: CTGGCAGTGATGTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAGCTCCTTTATCAAGCATCAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR GCA 90 bp ATAAAGGAGCTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATaGTACATTATCCAGGACATCACTGCCAGAGAGACCATACCTCTC +
Preference number: 1 (lower is better)
Translates to: IKELGLVVCVERSSI*YIIQDITARETIPL
Trigger: GAGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAGCTCCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR GCA 90 bp GAGGAAAAACCCAATGATTCAGTCTTTGGCATCTCCCACTCCATCTaGATTAATGGCGAACATAGCTTCAGCTTCAGGAAGACAGGGAGA +
Preference number: 1 (lower is better)
Translates to: EEKPNDSVFGISHSI*INGEHSFSFRKTGR
Trigger: TCTCCCTGTCTTCCTGAAGCTGAAGCTATGTTCGCCATTAATGCAGATGGAGTGGGAGATGCCAAAGACTGAATCATTGGGTTTTTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR CCA 90 bp CTTCAGCTTCAGGAAGACAGGGAGAGTCGTAGATTTTGCAGATTCTaGTTTCCCCTCTTCCTTTCCTCAGATACAATCTGGTTGTTGATG +
Preference number: 1 (lower is better)
Translates to: LQLQEDRESRRFCRF*FPLFLSSDTIWLLM
Trigger: CATCAACAACCAGATTGTATCTGAGGAAAGGAAGAGGGGAAACCAGAATCTGCAAAATCTACGACTCTCCCTGTCTTCCTGAAGCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR TCA 90 bp TATCTTGAGTTAGTCTTAGCAATGAAAGACCAAGCAGGTAGATGGTaGAGGGCTAATGGCCTAGTAGGTTTGGCACAAGACTCCATAACC +
Preference number: 1 (lower is better)
Translates to: YLELVLAMKDQAGRW*RANGLVGLAQDSIT
Trigger: GGTTATGGAGTCTTGTGCCAAACCTACTAGGCCATTAGCCCTTCACCATCTACCTGCTTGGTCTTTCATTGCTAAGACTAACTCAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR CCA 90 bp TCTTTGGAGCCAGTAGTAATCTGTATGATCTCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTGAAACCCATTGGAACTAATTTAGCT +
Preference number: 1 (lower is better)
Translates to: SLEPVVICMISDRLW*NSVAVVKPIGTNLA
Trigger: AGCTAAATTAGTTCCAATGGGTTTCACCACTGCAACTGAATTCCACCAAAGGCGGTCAGAGATCATACAGATTACTACTGGCTCCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR CCA 90 bp AGCTCTTTGGAGCCAGTAGTAATCTGTATGATCTCTGACCGCCTTTaGTGGAATTCAGTTGCAGTGGTGAAACCCATTGGAACTAATTTA +
Preference number: 1 (lower is better)
Translates to: SSLEPVVICMISDRL*WNSVAVVKPIGTNL
Trigger: TAAATTAGTTCCAATGGGTTTCACCACTGCAACTGAATTCCACCAAAGGCGGTCAGAGATCATACAGATTACTACTGGCTCCAAAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR CCA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATaGAAACCCTGTCTTGAAATAGCTTGCACTGCAATAATTGCTATA +
Preference number: 1 (lower is better)
Translates to: EATETDHPYTVPKRL*KPCLEIACTAIIAI
Trigger: TATAGCAATTATTGCAGTGCAAGCTATTTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR GCA 90 bp GCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 2 (lower is better)
Translates to: ASAETWPSASAWLKAHLDLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR CCA 90 bp GAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: ETWPSASAWLKAHLDPSSASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...ACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR CCA 90 bp GAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 2 (lower is better)
Translates to: ETWPSASAWLKAHLDPSSPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...ACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR CCA 90 bp TCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGT +
Preference number: 2 (lower is better)
Translates to: SAWLKAHLDPSSLFCKGRCQQPF*PKGTLS
Trigger: ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCA...CCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR-3UTR GCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPNPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp ACCATACCTCTCAGCCACTGCCAGCAGCCGTTCTGGCCTAAAGGTACCCTCAGTTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 2 (lower is better)
Translates to: TIPLSHCQQPFWPKGTLSSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR-3UTR GCA 90 bp TGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGGACAATACCTCTCAGCCACTaGCAGCAGCCGTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: WVWWSVLNARAYATLSRTIPLSH*QQPFWP
Trigger: AGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTAT...TGTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR-3UTR CCA 90 bp GAGCTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 2 (lower is better)
Translates to: ELGLVVCVERSSICYIIQRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...CTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR TCA 90 bp GCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 2 (lower is better)
Translates to: AETWPSASAWLKAHLDPSSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...ACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR-3UTR TCA 90 bp CTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 2 (lower is better)
Translates to: LTSTRVVCSVKGGGTVYNSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...ATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR CCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 2 (lower is better)
Translates to: PREQCTLIRLQHLRFLTERSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR-3UTR TCA 90 bp CTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: LKAHLDPSSLFCKGRWHCFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...ACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR GCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: IIAVFPEALSWQSQQEEANPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGAGGAAAAACCCAATaGTTCAGTCTTTGGCATCTC +
Preference number: 2 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPRGKTQ*FSLWHL
Trigger: GAGATGCCAAAGACTGAATCATTGGGTTTTTCCTCT...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423169.6
ENST00000525066.5
3UTR-3UTR GCA 90 bp AGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTAGATTCTACCATCATGAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: RAVALSTISSAYLDSTIMRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...CATGATGGTAGAATCTAGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR GCA 90 bp TCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGGTCTACAATAAGCAGTaGATACCTAGATTCTACCAT +
Preference number: 2 (lower is better)
Translates to: SAWLKAHLDPSSLFCKGRVYNKQ*IPRFYH
Trigger: ATGGTAGAATCTAGGTATGCACTGCTTATTGTAGAC...CCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR GCA 90 bp ATCAGCAGCAAACATCGCTGCTCCATCCACTTGAGCTACCACCTGATTAGTGATATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 2 (lower is better)
Translates to: ISSKHRCSIHLSYHLISDISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...ATCACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR-3UTR TCA 90 bp TCTGTAAAGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTAGATTCTACTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: SVKGGGTVYNKQCIPRFYFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...GTAGAATCTAGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLNPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR CAA 90 bp GAAGGGTCAGGTCTCTCCAGCTTTAGTTCTCTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCAC +
Preference number: 2 (lower is better)
Translates to: EGSGLSSFSSLGNIR*SSRQLVKPKSFLRH
Trigger: GTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACTAAAGCTGGAGAGACCTGACCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR GCA 90 bp TTAGCTTTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LAFKHNHLQVGLSFLVSNNPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...ATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAAAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR CCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: INILDQFVTTDLSPVYTIASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR-3UTR CCA 90 bp TCGGAATTCTCCAAACATTTCTGTGATAGATCCAGTCTCAATTCCACCTTGAAGTCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: SEFSKHFCDRSSLNSTLKSDRLW*NSVAVV
Trigger: CACCACTGCAACTGAATTCCACCAAAGGCGGTCAGA...CTTCAAGGTGGAATTGAGACTGGATCTATCACAGAAATGTTTGGAGAATTCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR-3UTR TCA 90 bp CGTATGACAGATCTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATGTCTCAATTCCACCTTaGAGTAGTTTGTCAAGCTCT +
Preference number: 2 (lower is better)
Translates to: RMTDLGLPSSEFSKHFCDVSIPP*SSLSSS
Trigger: AGAGCTTGACAAACTACTTCAAGGTGGAATTGAGAC...ATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAGATCTGTCATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR-3UTR GCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: EGINILDQFVTTDLSPVYNPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR GCA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCCAGACCCATTCCCTTTaGTACATAGCTGAGGCATTT +
Preference number: 2 (lower is better)
Translates to: EATETDHPYTVPKRLWKPQTHSL*YIAEAF
Trigger: AAATGCCTCAGCTATGTAGCAAAGGGAATGGGTCTG...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR GCA 90 bp TTAGCTTTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATGCAATCTCGACTCACTaGAACTTCCACCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: LAFKHNHLQVGLSFLVSNAISTH*NFHLPG
Trigger: GCCTGGAAGGTGGAAGTTGCAGTGAGTCGAGATTGC...ATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR CCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCACCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR CCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTACCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp TTAGCTTTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCAAGCAGGTAGATGGTaGAGGGCTAATGGCCTAGTA +
Preference number: 2 (lower is better)
Translates to: LAFKHNHLQVGLSFLVSNQAGRW*RANGLV
Trigger: TACTAGGCCATTAGCCCTTCACCATCTACCTGCTTG...ATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAAAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR TCA 90 bp TCGGAATTCTCCAAACATTTCTGTGATAGATCCAGTCTCAATTCCACCTTGAAGAATCTGTATGATCTCTaGCCGCCTTTGGTGGAATTC +
Preference number: 2 (lower is better)
Translates to: SEFSKHFCDRSSLNSTLKNLYDL*PPLVEF
Trigger: GAATTCCACCAAAGGCGGTCAGAGATCATACAGATT...CTTCAAGGTGGAATTGAGACTGGATCTATCACAGAAATGTTTGGAGAATTCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR-3UTR TCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 2 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTACAGACCCATTCCCTTTaGTACATAGCTGAGGCATTT +
Preference number: 2 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLQTHSL*YIAEAF
Trigger: AAATGCCTCAGCTATGTAGCAAAGGGAATGGGTCTG...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR CCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATCCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: EGINILDQFVTTDLSPVYPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR GCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACATTAGTGATTACCACTaGTACACCAAACTCATCAGC +
Preference number: 2 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYISDYH*YTKLIS
Trigger: GCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAAT...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR-3UTR TCA 90 bp CATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: HLQVGLSFLVSNLEATETYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...AGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR TCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAACCTTTGCTACATAGCTaGGGCATTTTATTTTACCAT +
Preference number: 2 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLEPLLHS*GILFYH
Trigger: ATGGTAAAATAAAATGCCTCAGCTATGTAGCAAAGG...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR TCA 90 bp TTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAATGGAAACCCTGTCTTaGAATAGCTTGCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: FKHNHLQVGLSFLVSNLEMETLS*NSLHCN
Trigger: ATTGCAGTGCAAGCTATTTCAAGACAGGGTTTCCAT...TTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR GCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 2 (lower is better)
Translates to: INILDQFVTTDLSPVYTIISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423169.6
ENST00000525066.5
3UTR-3UTR TCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 2 (lower is better)
Translates to: INILDQFVTTDLSPVYTISVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR TCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTACCTTTGCTACATAGCTaGGGCATTTTATTTTACCAT +
Preference number: 2 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLPLLHS*GILFYH
Trigger: ATGGTAAAATAAAATGCCTCAGCTATGTAGCAAAGG...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
3UTR-3UTR TCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCAGAGGAAAAACCCAATaGTTCAGTCTTTGGCATCTC +
Preference number: 2 (lower is better)
Translates to: INILDQFVTTDLSPVYTIRGKTQ*FSLWHL
Trigger: GAGATGCCAAAGACTGAATCATTGGGTTTTTCCTCT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423169.6
ENST00000525066.5
3UTR GCA 72 bp GCGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGCTCACCTCGACCCGAG +
Preference number: 3 (lower is better)
Translates to: ASRRSIRRNLAK*ICLAESSPRPE
Trigger: CTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR-3UTR CAA 90 bp GCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 3 (lower is better)
Translates to: ASAETWPSASAWLKAHLDVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR CCA 72 bp ACTCATCAGCGAGTCGCAGAAGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTC +
Preference number: 3 (lower is better)
Translates to: THQRVAEASAET*PSASAWLKAHL
Trigger: GAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR CCA 72 bp GAGACCATACCTCTCAGCCACTGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGTGTCAATGTACATGGC +
Preference number: 3 (lower is better)
Translates to: ETIPLSHCQQPF*PKGTLSVNVHG
Trigger: GCCATGTACATTGACACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTATGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR TCA 72 bp CGGTCAATGGGAAGCTGGCAGGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCAGTTCGGAATTCTCCA +
Preference number: 3 (lower is better)
Translates to: RSMGSWQVTASV*QIWVFPVRNSP
Trigger: TGGAGAATTCCGAACTGGGAAGACCCAGATCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR GCA 72 bp CCCTGGCTGGAATGCAGCAGTGCAATCTCGACTCACTaGAACTTCCACCTTCCAGGCTTAAGTGATTCTCCC +
Preference number: 3 (lower is better)
Translates to: PWLECSSAISTH*NFHLPGLSDSP
Trigger: GGGAGAATCACTTAAGCCTGGAAGGTGGAAGTTGCAGTGAGTCGAGATTGCACTGCTGCATTCCAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR GCA 72 bp CTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATaGTACATTATCCAGGACATCACTGCCAGAGAGACC +
Preference number: 3 (lower is better)
Translates to: LGLVVCVERSSI*YIIQDITARET
Trigger: GGTCTCTCTGGCAGTGATGTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
3UTR CCA 72 bp GCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCC +
Preference number: 3 (lower is better)
Translates to: ADIIAVFPEALS*QSQQEEACREP
Trigger: GGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR GCA 72 bp ATCCACTTGAGCTACCACCTGATTAGTGATTACCACTaGTACACCAAACTCATCAGCGAGTCGCAGAAGCAT +
Preference number: 3 (lower is better)
Translates to: IHLSYHLISDYH*YTKLISESQKH
Trigger: ATGCTTCTGCGACTCGCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAATCAGGTGGTAGCTCAAGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR GCA 72 bp CCCAATGATTCAGTCTTTGGCATCTCCCACTCCATCTaGATTAATGGCGAACATAGCTTCAGCTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: PNDSVFGISHSI*INGEHSFSFRK
Trigger: CTTCCTGAAGCTGAAGCTATGTTCGCCATTAATGCAGATGGAGTGGGAGATGCCAAAGACTGAATCATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
3UTR CCA 72 bp GAGCCAGTAGTAATCTGTATGATCTCTGACCGCCTTTaGTGGAATTCAGTTGCAGTGGTGAAACCCATTGGA +
Preference number: 3 (lower is better)
Translates to: EPVVICMISDRL*WNSVAVVKPIG
Trigger: TCCAATGGGTTTCACCACTGCAACTGAATTCCACCAAAGGCGGTCAGAGATCATACAGATTACTACTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR TCA 72 bp AATAAGCAGTGCATACCTAGATTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTGGGTCTGGTGGTCTGT +
Preference number: 3 (lower is better)
Translates to: NKQCIPRFYHHG*CLIKELGLVVC
Trigger: ACAGACCACCAGACCCAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAATCTAGGTATGCACTGCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
3UTR TCA 72 bp AAGCTCTTTGGAGCCAGTAGTAATCTGTATGATCTCTaGCCGCCTTTGGTGGAATTCAGTTGCAGTGGTGAA +
Preference number: 3 (lower is better)
Translates to: KLFGASSNLYDL*PPLVEFSCSGE
Trigger: TTCACCACTGCAACTGAATTCCACCAAAGGCGGTCAGAGATCATACAGATTACTACTGGCTCCAAAGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR CCA 72 bp CCAGTAGTAATCTGTATGATCTCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTGAAACCCATTGGAACT +
Preference number: 3 (lower is better)
Translates to: PVVICMISDRLW*NSVAVVKPIGT
Trigger: AGTTCCAATGGGTTTCACCACTGCAACTGAATTCCACCAAAGGCGGTCAGAGATCATACAGATTACTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
3UTR-3UTR CAA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCAATGGCCTAGTAGGTTaGGCACAAGACTCCATAACC +
Preference number: 3 (lower is better)
Translates to: EATETDHPYTVPKRLWKPNGLVG*AQDSIT
Trigger: GGTTATGGAGTCTTGTGCCAAACCTACTAGGCCATT...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR CAA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 3 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423169.6
ENST00000525066.5
3UTR-3UTR CAA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGTGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 3 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRCPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR CAA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTATGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 3 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLCPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR-3UTR CAA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCCTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: EATETDHPYTVPKRLWKPLGNIR*SSRQLV
Trigger: AACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR CAA 90 bp CATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTCTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: HLQVGLSFLVSNLEATETLGNIR*SSRQLV
Trigger: AACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG...AGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR-3UTR CAA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCCCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 3 (lower is better)
Translates to: INILDQFVTTDLSPVYTIPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423169.6
ENST00000525066.5
CDS-3UTR GCA 90 bp CGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGTTGCAGTTCCCAGCTaGACGCCTCGGGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RVAEASAETWPSASAWLKVAVPS*TPREAP
Trigger: CGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAAC...TTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp GCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: AETWPSASAWLKAHLDPSVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...ACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR TCA 90 bp CGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: RVAEASAETWPSASAWLKVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...TTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTATTAGGGCTCGGTCTCTaGCCGCTGCGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLLGLGL*PLRAVR
Trigger: GCGGACCGCGCGCAGCGGCCAGAGACCGAGCCCTAA...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCGGCCCCCAACGCCCCTaGCTTACGCTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPGPQRP*LTLHFS
Trigger: AGAGAAGTGGAGCGTAAGCCAGGGGCGTTGGGGGCC...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TACCTCTCAGCCACTGCCAGCAGCCGTTCTGGCCTAAAGGTACCCTCAGTGTCAATACCTCTCAGCCACTaGCAGCAGCCGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: YLSATASSRSGLKVPSVSIPLSH*QQPFWP
Trigger: AGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTAT...TGACACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR CCA 90 bp GCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTCCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 4 (lower is better)
Translates to: AETWPSASAWLKAHLDPSPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...ACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR TCA 90 bp GAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTTGGGAAGCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: ETWPSASAWLKAHLDPSSWEAGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCA...ACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR GCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAGTTGCAGTTCCCAGCTaGACGCCTCGGGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLVAVPS*TPREAP
Trigger: CGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAAC...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGACAACCCAGATGAGTTaGAGTTCCCAGCTGCACGCC +
Preference number: 4 (lower is better)
Translates to: SAWLKAHLDPSSLFCKGRTTQMS*SSQLHA
Trigger: GGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGT...CCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR GCA 90 bp GCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AETWPSASAWLKAHLDPSRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...ACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CCA 90 bp ACCATACCTCTCAGCCACTGCCAGCAGCCGTTCTGGCCTAAAGGTACCCTCAGTAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 4 (lower is better)
Translates to: TIPLSHCQQPFWPKGTLSRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR CCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp ATCAGCGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: ISESQKHPQKPGQVHLPGSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...GCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR GCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCCTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGCGGTCAATGGGAAGCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQRSMGS*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR CCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGTGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQCQQPF*PKGTLS
Trigger: ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCA...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR CCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGACCATACCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQTIPGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGGTATGGT...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR GCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATCAGCGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ISESQKHPQKPGQVHLPGALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...GCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CCA 90 bp AGGTACCCTCAGTGTCAATGTACATGGCCTTTCCTTCACCTCCACCCCGGTCAACGGTCAATGGGAAGCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: RYPQCQCTWPFLHLHPGQRSMGS*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG...TTGACCGGGGTGGAGGTGAAGGAAAGGCCATGTACATTGACACTGAGGGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR CCA 90 bp GAGCTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELGLVVCVERSSICYIIQASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...CTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR TCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTATGCGCACAACCCAGATaGGTTGCAGTTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLCAQPR*VAVPSC
Trigger: GCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCA...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEAVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCCAAGCAGGTAGATGGTaGAGGGCTAATGGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPQAGRW*RANGLV
Trigger: TACTAGGCCATTAGCCCTTCACCATCTACCTGCTTG...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACTTTCGCCCCAGCAGCTaGGGGTCGGTCGGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYFRPSS*GSVGRG
Trigger: TCCGCGCCCGACCGACCCTCAGCTGCTGGGGCGAAA...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532743.6
CDS-3UTR GCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCGCTTCAAGCTGCATCTaGATTGCCATTACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPASSCI*IAITRS
Trigger: GGACCGAGTAATGGCAATGCAGATGCAGCTTGAAGC...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TCAGCGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTTTGGTGGAATTCAGTTaGAGTGGTGAAACCCATTGG +
Preference number: 4 (lower is better)
Translates to: SASRRSIRRNLAKCICLALVEFS*SGETHW
Trigger: CCAATGGGTTTCACCACTGCAACTGAATTCCACCAA...AGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR GCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGCTGAGAGGCGGAGGGTaGAGTAGACCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTELRGGG*SRPRSR
Trigger: GCGTGATCTTGGTCTACTGCACCCTCCGCCTCTCAG...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382643.7
ENST00000645673.2
CDS-3UTR CCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAATTAGGGCTCGGTCTCTaGCCGCTGCGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQLGLGL*PLRAVR
Trigger: GCGGACCGCGCGCAGCGGCCAGAGACCGAGCCCTAA...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACACAGCCTCCACAGTATaGAATCCAGCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ASAETWPSASAWLKAHLDTASTV*NPASSN
Trigger: ATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGT...GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR TCA 90 bp AGCAGCCGTTCTGGCCTAAAGGTACCCTCAGTGTCAATGTACATGGCCTTTCCTGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSRSGLKVPSVSMYMAFPVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...AGGAAAGGCCATGTACATTGACACTGAGGGTACCTTTAGGCCAGAACGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR TCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGTGGGAAGCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEWEAGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCA...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGGCATTTATGCCACACTaGTCTAACCGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: SAWLKAHLDPSSLFCKGRAFMPH*SNREMG
Trigger: ACCCATTTCACGGTTAGAGCAGTGTGGCATAAATGC...CCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR GCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGCATCGTTGGCATTTATaGCACACTGCTCTAACCGTG +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQHRWHL*HTALTV
Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAACGATG...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAGCTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ELGLVVCVERSSICYIIQRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...CTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR GCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLNPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGGGCGCGGACACGCCCTaGCACGTCCGGGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRGADTP*HVRVSH
Trigger: GTGTGAAACCCGGACGTGGCAGGGCGTGTCCGCGCC...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532743.6
CDS-3UTR CCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTATTAGGGCTCGGTCTCTaGCCGCTGCGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLLGLGL*PLRAVR
Trigger: GCGGACCGCGCGCAGCGGCCAGAGACCGAGCCCTAA...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CAGATTCTGGTTTCCCCTCTTCCTTTCCTCAGATACAATCTGGTTGTTGATGCAGGCCCCCAACGCCCCTaGCTTACGCTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: QILVSPLPFLRYNLVVDAGPQRP*LTLHFS
Trigger: AGAGAAGTGGAGCGTAAGCCAGGGGCGTTGGGGGCC...TGCATCAACAACCAGATTGTATCTGAGGAAAGGAAGAGGGGAAACCAGAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTATGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLCQQPF*PKGTLS
Trigger: ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCA...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR CCA 90 bp GGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGGACATCTGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GLVVCVERSSICYIIQDICQQPF*PKGTLS
Trigger: ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCA...GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR CCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTACCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEAASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVCSVKGGGTVYNKQCIPASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...AGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CCA 90 bp CGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAACTGGTTGTTGATGCATaGGCGATGATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVAEASAETWPSASAWLKLVVDA*AMIFPP
Trigger: TGGAGGAAATATCATCGCCCATGCATCAACAACCAG...TTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCTGCGCACAACCCAGATaGGTTGCAGTTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGCAQPR*VAVPSC
Trigger: GCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCA...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGGCTTTCTTCTTCCACTaGAGTATCTGCATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAWLKAHLDPSSLFCKGRAFFFH*SICICF
Trigger: GAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGC...CCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR TCA 90 bp TGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCGCTTTCTTCTTCCACTaGAGTATCTGCATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: WPSASAWLKAHLDPSSLFAFFFH*SICICF
Trigger: GAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGC...GAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR TCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAATCTGTATGATCTCTaGCCGCCTTTGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPNLYDL*PPLVEF
Trigger: GAATTCCACCAAAGGCGGTCAGAGATCATACAGATT...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAGTTGCAGTTCCCAGCTaGACGCCTCGGGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQVAVPS*TPREAP
Trigger: CGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAAC...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGAAGCTGCATCTGCATTaGCATTACTCGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEKLHLH*HYSVRS
Trigger: GCTGCGGACCGAGTAATGGCAATGCAGATGCAGCTT...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGGTCTACAATAAGCAGTaGATACCTAGATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: SAETWPSASAWLKAHLDPVYNKQ*IPRFYH
Trigger: ATGGTAGAATCTAGGTATGCACTGCTTATTGTAGAC...CGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR GCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCCTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEALAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGGCAATCTCGACTCACTaGAACTTCCACCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEAISTH*NFHLPG
Trigger: GCCTGGAAGGTGGAAGTTGCAGTGAGTCGAGATTGC...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTACCAAGATCACGCTATTaGACTCCAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLPRSRY*TPAWQQ
Trigger: CTGTTGCCAGGCTGGAGTGCAATAGCGTGATCTTGG...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382643.7
ENST00000645673.2
CDS-3UTR GCA 90 bp CTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATAGATCCAGTCTCCTGAGAGGCGGAGGGTaGAGTAGACCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: LGLPSSEFSKHFCDRSSLLRGGG*SRPRSR
Trigger: GCGTGATCTTGGTCTACTGCACCCTCCGCCTCTCAG...GAGACTGGATCTATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR CCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGGCCCCCAACGCCCCTaGCTTACGCTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQGPQRP*LTLHFS
Trigger: AGAGAAGTGGAGCGTAAGCCAGGGGCGTTGGGGGCC...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGTCCTCAGATACAATCTaGTTGTTGATGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQSSDTI*LLMHGR
Trigger: TCGCCCATGCATCAACAACCAGATTGTATCTGAGGA...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATTACCACTGCTACACCAAACTCATCAGCGAGTCGCAGAAGCATCCGCAGAAACCAGAGAGACCATACCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: ITTATPNSSASRRSIRRNQRDHT*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGGTATGGTCTCTCTG...GTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGTTTGGTGTAGCAGTGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp CTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTGTCTCAATTCCACCTTaGAGTAGTTTGTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LKAHLDPSSLFCKGRWHCVSIPP*SSLSSS
Trigger: AGAGCTTGACAAACTACTTCAAGGTGGAATTGAGAC...ACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp CTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LTSTRVVCSVKGGGTVYNFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...ATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR TCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGTTGCAGTTCCCAGCTaGACGCCTCGGGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSVAVPS*TPREAP
Trigger: CGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAAC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAGTTGCAGTTCCCAGCTaGACGCCTCGGGAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLVAVPS*TPREAP
Trigger: CGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAAC...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TATCGAGTAGCTGGGACTACAGGCACGTGTAACAGTGTGTCCAGATTAAGTTCTACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACA +
Preference number: 4 (lower is better)
Translates to: YRVAGTTGTCNSVSRLSSTSLLA*PSLLRT
Trigger: TGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGT...AGAACTTAATCTGGACACACTGTTACACGTGCCTGTAGTCCCAGCTACTCGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp AGCAGCCGTTCTGGCCTAAAGGTACCCTCAGTGTCAATGTACATGGCCTTTCCTCATCGTTGGCATTTATaGCACACTGCTCTAACCGTG +
Preference number: 4 (lower is better)
Translates to: SSRSGLKVPSVSMYMAFPHRWHL*HTALTV
Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAACGATG...AGGAAAGGCCATGTACATTGACACTGAGGGTACCTTTAGGCCAGAACGGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR GCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCATACCTCTCAGCCACTaGCAGCAGCCGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTIPLSH*QQPFWP
Trigger: AGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTAT...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR GCA 90 bp CTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: LTSTRVVCSVKGGGTVYNERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...ATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR GCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TCTGTAAAGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTAGATTCTACCTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SVKGGGTVYNKQCIPRFYLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...GTAGAATCTAGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR GCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAAGCAGCAAACATCGCTaGTCCATCCACTTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLSSKHR*SIHLSY
Trigger: GTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCT...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCTTAGGGCTCGGTCTCTaGCCGCTGCGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTILGLGL*PLRAVR
Trigger: GCGGACCGCGCGCAGCGGCCAGAGACCGAGCCCTAA...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATTTAGGGCTCGGTCTCTaGCCGCTGCGCGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYLGLGL*PLRAVR
Trigger: GCGGACCGCGCGCAGCGGCCAGAGACCGAGCCCTAA...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAAGGCCCCCAACGCCCCTaGCTTACGCTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLEGPQRP*LTLHFS
Trigger: AGAGAAGTGGAGCGTAAGCCAGGGGCGTTGGGGGCC...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGTCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTESDRLW*NSVAVV
Trigger: CACCACTGCAACTGAATTCCACCAAAGGCGGTCAGA...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR CCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTACCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATTACCACTGCTACACCAAACTCATCAGCGAGTCGCAGAAGCATCCGCAGAAACCCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ITTATPNSSASRRSIRRNPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...GTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGTTTGGTGTAGCAGTGGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp TTGTCAAGCTCTTTGGAGCCAGTAGTAATCTGTATGATCTCTGACCGCCTTTGGGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSSSLEPVVICMISDRLWVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...CCAAAGGCGGTCAGAGATCATACAGATTACTACTGGCTCCAAAGAGCTTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR TCA 90 bp CGTATGACAGATCTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATTGGGAAGCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: RMTDLGLPSSEFSKHFCDWEAGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCA...ATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAGATCTGTCATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR TCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEASGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGATACCTCTCAGCCACTaGCAGCAGCCGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQIPLSH*QQPFWP
Trigger: AGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTAT...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR GCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGTATCCAGGACATCACTaGCAGAGAGACCATACCTCT +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEYPGHH*QRDHTS
Trigger: AGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATA...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTATATCCAGGACATCACTaGCAGAGAGACCATACCTCT +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLYPGHH*QRDHTS
Trigger: AGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATA...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGGACGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: LGLVVCVERSSICYIIQDERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...GTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR GCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCCTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGATTAGTGATTACCACTaGTACACCAAACTCATCAGC +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQISDYH*YTKLIS
Trigger: GCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAAT...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCAGCAGCAAACATCGCTaGTCCATCCACTTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEASSKHR*SIHLSY
Trigger: GTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCT...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACTCGGCCTCCCAAAGTaGTGGGAGTACAGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSLGLPK*WEYRRK
Trigger: CTTGCGCCTGTACTCCCAGCACTTTGGGAGGCCGAG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACTCGGCCTCCCAAAGTaGTGGGAGTACAGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQLGLPK*WEYRRK
Trigger: CTTGCGCCTGTACTCCCAGCACTTTGGGAGGCCGAG...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGGCCCCCAACGCCCCTaGCTTACGCTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSGPQRP*LTLHFS
Trigger: AGAGAAGTGGAGCGTAAGCCAGGGGCGTTGGGGGCC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCCGGTCAATGGGAAGCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTRSMGS*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR CCA 90 bp CGTATGACAGATCTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATCGGTCAATGGGAAGCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: RMTDLGLPSSEFSKHFCDRSMGS*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG...ATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAGATCTGTCATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR CCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EATETDHPYTVPKRLWKPASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
3UTR CAA 72 bp TTTGGGATCAGCAGCAAACATCGCTGCTCCATCCACTaGAGCTACCACCTGATTAGTGATTACCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: FGISSKHRCSIH*SYHLISDYHCY
Trigger: GTAGCAGTGGTAATCACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCTGATCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAATGCGCACAACCCAGATaGGTTGCAGTTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLECAQPR*VAVPSC
Trigger: GCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCA...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATTGCGCACAACCCAGATaGGTTGCAGTTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHCAQPR*VAVPSC
Trigger: GCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCA...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGTGGGAAGCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQWEAGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCA...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTATTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: PEALSWQSQQEEACREPQYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGACAACCCAGATGAGTTaGAGTTCCCAGCTGCACGCC +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQTTQMS*SSQLHA
Trigger: GGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGT...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CACTTGAGCTACCACCTGATTAGTGATTACCACTGCTACACCAAACTCATCAGCGCTTCAAGCTGCATCTaGATTGCCATTACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: HLSYHLISDYHCYTKLISASSCI*IAITRS
Trigger: GGACCGAGTAATGGCAATGCAGATGCAGCTTGAAGC...GCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAATCAGGTGGTAGCTCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR GCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCGCTTCAAGCTGCATCTaGATTGCCATTACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGASSCI*IAITRS
Trigger: GGACCGAGTAATGGCAATGCAGATGCAGCTTGAAGC...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGGCATTTATGCCACACTaGTCTAACCGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEAFMPH*SNREMG
Trigger: ACCCATTTCACGGTTAGAGCAGTGTGGCATAAATGC...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTATTGGTGGAATTCAGTTaGAGTGGTGAAACCCATTGG +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLLVEFS*SGETHW
Trigger: CCAATGGGTTTCACCACTGCAACTGAATTCCACCAA...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR GCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACATACCTCTCAGCCACTaGCAGCAGCCGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYIPLSH*QQPFWP
Trigger: AGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTAT...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR GCA 90 bp AGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTAGATTCTACCATCATGTATCCAGGACATCACTaGCAGAGAGACCATACCTCT +
Preference number: 4 (lower is better)
Translates to: RAVALSTISSAYLDSTIMYPGHH*QRDHTS
Trigger: AGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATA...CATGATGGTAGAATCTAGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR GCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCGTCTACAATAAGCAGTaGATACCTAGATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPVYNKQ*IPRFYH
Trigger: ATGGTAGAATCTAGGTATGCACTGCTTATTGTAGAC...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CGCCTTTGGTGGAATTCAGTTGCAGTGGTGAAACCCATTGGAACTAATTTAGCTCCAAGATCACGCTATTaGACTCCAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: RLWWNSVAVVKPIGTNLAPRSRY*TPAWQQ
Trigger: CTGTTGCCAGGCTGGAGTGCAATAGCGTGATCTTGG...AGCTAAATTAGTTCCAATGGGTTTCACCACTGCAACTGAATTCCACCAAAGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR CCA 90 bp GAGCATATGCTACATTATCCAGGACATCACTGCCAGAGAGACCATACCTCTCAGGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: EHMLHYPGHHCQRDHTSQALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...CTGAGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATAATGTAGCATATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR CCA 90 bp TCAGTGTCAATGTACATGGCCTTTCCTTCACCTCCACCCCGGTCAATGGGAAGCATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: SVSMYMAFPSPPPRSMGSISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...GCTTCCCATTGACCGGGGTGGAGGTGAAGGAAAGGCCATGTACATTGACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR CCA 90 bp CTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATAGATCCAGTCTCTCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGLPSSEFSKHFCDRSSLSDRLW*NSVAVV
Trigger: CACCACTGCAACTGAATTCCACCAAAGGCGGTCAGA...GAGACTGGATCTATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR CCA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGT +
Preference number: 4 (lower is better)
Translates to: EATETDHPYTVPKRLWKPCQQPF*PKGTLS
Trigger: ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCA...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGCCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHASAET*PSASAW
Trigger: CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGC...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGCTGGTTGTTGATGCATaGGCGATGATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PREQCTLIRLQHLRFLTELVVDA*AMIFPP
Trigger: TGGAGGAAATATCATCGCCCATGCATCAACAACCAG...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTATGCGCACAACCCAGATaGGTTGCAGTTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLCAQPR*VAVPSC
Trigger: GCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCA...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATGGGAAGCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSWEAGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCA...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEAFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGGACATACAATCTGGTTGTTaGTGCATGGGCGATGATATT +
Preference number: 4 (lower is better)
Translates to: LGLVVCVERSSICYIIQDIQSGC*CMGDDI
Trigger: AATATCATCGCCCATGCATCAACAACCAGATTGTAT...GTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR GCA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAAACAACCCAGATGAGTTaGAGTTCCCAGCTGCACGCC +
Preference number: 4 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLETTQMS*SSQLHA
Trigger: GGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGT...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGACAACCCAGATGAGTTaGAGTTCCCAGCTGCACGCC +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRTTQMS*SSQLHA
Trigger: GGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGT...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACA +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQTSLLA*PSLLRT
Trigger: TGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGT...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACA +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRTSLLA*PSLLRT
Trigger: TGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGT...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGAAGCTGCATCTGCATTaGCATTACTCGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQKLHLH*HYSVRS
Trigger: GCTGCGGACCGAGTAATGGCAATGCAGATGCAGCTT...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCGCATTTATGCCACACTaGTCTAACCGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEAAFMPH*SNREMG
Trigger: ACCCATTTCACGGTTAGAGCAGTGTGGCATAAATGC...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAATACCTCTCAGCCACTaGCAGCAGCCGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSIPLSH*QQPFWP
Trigger: AGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTAT...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: EATETDHPYTVPKRLWKPRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEAISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAAAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLENPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQNPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATAACCCCAGGGAGCAGTaGACTCTCATTAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHNPREQ*TLIRLQ
Trigger: CTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTT...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TATCGAGTAGCTGGGACTACAGGCACGTGTAACAGTGTGTCCAGATTAAGTTCTGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: YRVAGTTGTCNSVSRLSSALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...AGAACTTAATCTGGACACACTGTTACACGTGCCTGTAGTCCCAGCTACTCGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACGGTCAATGGGAAGCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQRSMGS*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATCGGTCAATGGGAAGCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHRSMGS*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR CCA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAATGCCAGCAGCCGTTCTaGCCTAAAGGTACCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLECQQPF*PKGTLS
Trigger: ACTGAGGGTACCTTTAGGCCAGAACGGCTGCTGGCA...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCCTGGTTGTTGATGCATaGGCGATGATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEALVVDA*AMIFPP
Trigger: TGGAGGAAATATCATCGCCCATGCATCAACAACCAG...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTCCTCAGATACAATCTaGTTGTTGATGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEASSDTI*LLMHGR
Trigger: TCGCCCATGCATCAACAACCAGATTGTATCTGAGGA...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCCCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
3UTR CAA 72 bp GATGCATGGGCGATGATATTTCCTCCAATAGGTTTTTaGGGATCAGCAGCAAACATCGCTGCTCCATCCACT +
Preference number: 4 (lower is better)
Translates to: DAWAMIFPPIGF*GSAANIAAPST
Trigger: AGTGGATGGAGCAGCGATGTTTGCTGCTGATCCCAAAAAACCTATTGGAGGAAATATCATCGCCCATGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCGTCTCAATTCCACCTTaGAGTAGTTTGTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEAVSIPP*SSLSSS
Trigger: AGAGCTTGACAAACTACTTCAAGGTGGAATTGAGAC...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCAGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATGGGAAGCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSWEAGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCA...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAGTGCATCTGCCTGGCTaGAAGCTCACCTCGACCCGA +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKVHLPG*KLTSTR
Trigger: TCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCAC...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp GTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTAGAGGAAAAACCCAATaGTTCAGTCTTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: VVCSVKGGGTVYNKQCIPRGKTQ*FSLWHL
Trigger: GAGATGCCAAAGACTGAATCATTGGGTTTTTCCTCT...AGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp GAGCTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ELGLVVCVERSSICYIIQYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...CTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp ATCAGCAGCAAACATCGCTGCTCCATCCACTTGAGCTACCACCTGATTAGTGATTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: ISSKHRCSIHLSYHLISDSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...ATCACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAACAACCCAGATGAGTTaGAGTTCCCAGCTGCACGCC +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLTTQMS*SSQLHA
Trigger: GGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGT...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACA +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSTSLLA*PSLLRT
Trigger: TGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGT...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAAAAGCTGCATCTGCATTaGCATTACTCGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLEKLHLH*HYSVRS
Trigger: GCTGCGGACCGAGTAATGGCAATGCAGATGCAGCTT...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCGCTTCAAGCTGCATCTaGATTGCCATTACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPASSCI*IAITRS
Trigger: GGACCGAGTAATGGCAATGCAGATGCAGCTTGAAGC...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCCATCGTTGGCATTTATaGCACACTGCTCTAACCGTG +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTHRWHL*HTALTV
Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAACGATG...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTACTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCGCTTCAAGCTGCATCTaGATTGCCATTAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTASSCI*IAISST
Trigger: AGTGGAGCTAATGGCAATGCAGATGCAGCTTGAAGC...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382643.7
CDS-3UTR GCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACCAAGATCACGCTATTaGACTCCAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSPRSRY*TPAWQQ
Trigger: CTGTTGCCAGGCTGGAGTGCAATAGCGTGATCTTGG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382643.7
ENST00000645673.2
CDS-3UTR CCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AGTAGTTTGTCAAGCTCTTTGGAGCCAGTAGTAATCTGTATGATCTCTGACCGCAATCTGTATGATCTCTaGCCGCCTTTGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: SSLSSSLEPVVICMISDRNLYDL*PPLVEF
Trigger: GAATTCCACCAAAGGCGGTCAGAGATCATACAGATT...GCGGTCAGAGATCATACAGATTACTACTGGCTCCAAAGAGCTTGACAAACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR TCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAATCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTATACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TATCGAGTAGCTGGGACTACAGGCACGTGTAACAGTGTGTCCAGATTAAGTTCTTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: YRVAGTTGTCNSVSRLSSSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...AGAACTTAATCTGGACACACTGTTACACGTGCCTGTAGTCCCAGCTACTCGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACAAGCAGGTAGATGGTaGAGGGCTAATGGCCTAGTA +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSQAGRW*RANGLV
Trigger: TACTAGGCCATTAGCCCTTCACCATCTACCTGCTTG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp GACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTGATCACCCCTATACCTTCCAGGCTTAAGTaGTTCTCCCACCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: DFPFWFQILKQQKLITPIPSRLK*FSHLRL
Trigger: TAGCCTGAGGTGGGAGAATCACTTAAGCCTGGAAGG...TATAGGGGTGATCAGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGCATCGTTGGCATTTATaGCACACTGCTCTAACCGTG +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQHRWHL*HTALTV
Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAACGATG...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCTTGGTGGAATTCAGTTaGAGTGGTGAAACCCATTGG +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTLVEFS*SGETHW
Trigger: CCAATGGGTTTCACCACTGCAACTGAATTCCACCAA...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR GCA 90 bp CGTATGACAGATCTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATTTGGTGGAATTCAGTTaGAGTGGTGAAACCCATTGG +
Preference number: 4 (lower is better)
Translates to: RMTDLGLPSSEFSKHFCDLVEFS*SGETHW
Trigger: CCAATGGGTTTCACCACTGCAACTGAATTCCACCAA...ATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAGATCTGTCATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR GCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAAGCAGCAAACATCGCTaGTCCATCCACTTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQSSKHR*SIHLSY
Trigger: GTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCT...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATAGCAGCAAACATCGCTaGTCCATCCACTTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHSSKHR*SIHLSY
Trigger: GTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCT...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: VVCSVKGGGTVYNKQCIPISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...AGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSSDRLW*NSVAVV
Trigger: CACCACTGCAACTGAATTCCACCAAAGGCGGTCAGA...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR CCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATTCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHSDRLW*NSVAVV
Trigger: CACCACTGCAACTGAATTCCACCAAAGGCGGTCAGA...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR CCA 90 bp TTAGCTTTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 4 (lower is better)
Translates to: LAFKHNHLQVGLSFLVSNPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...ATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAAAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp CAGATTCTGGTTTCCCCTCTTCCTTTCCTCAGATACAATCTGGTTGTTGATGCATCCTCAGATACAATCTaGTTGTTGATGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: QILVSPLPFLRYNLVVDASSDTI*LLMHGR
Trigger: TCGCCCATGCATCAACAACCAGATTGTATCTGAGGA...TGCATCAACAACCAGATTGTATCTGAGGAAAGGAAGAGGGGAAACCAGAATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCATTCAGTTGCAGTGGTaGAACCCATTGGAACTAATT +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGIQLQW*NPLELI
Trigger: AATTAGTTCCAATGGGTTTCACCACTGCAACTGAAT...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp CTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATAGATCCAGTCTCATTCAGTTGCAGTGGTaGAACCCATTGGAACTAATT +
Preference number: 4 (lower is better)
Translates to: LGLPSSEFSKHFCDRSSLIQLQW*NPLELI
Trigger: AATTAGTTCCAATGGGTTTCACCACTGCAACTGAAT...GAGACTGGATCTATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR TCA 90 bp CAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCAATCTGTATGATCTCTaGCCGCCTTTGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: QQKLITPIQCQKDYGNPVNLYDL*PPLVEF
Trigger: GAATTCCACCAAAGGCGGTCAGAGATCATACAGATT...GACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267868.8
CDS-3UTR TCA 90 bp AGTAGTTTGTCAAGCTCTTTGGAGCCAGTAGTAATCTGTATGATCTCTGACCGCGTCTCAATTCCACCTTaGAGTAGTTTGTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLSSSLEPVVICMISDRVSIPP*SSLSSS
Trigger: AGAGCTTGACAAACTACTTCAAGGTGGAATTGAGAC...GCGGTCAGAGATCATACAGATTACTACTGGCTCCAAAGAGCTTGACAAACTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR TCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCTGGGAAGCTGGCAGGTaGCAGCTAGCGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIWEAGR*QLAYDR
Trigger: TCTGTCATACGCTAGCTGTCACCTGCCAGCTTCCCA...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTATCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp GTCGTAGATTTTGCAGATTCTGGTTTCCCCTCTTCCTTTCCTCAGATACAATCTTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VVDFADSGFPSSFPQIQSFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...AGATTGTATCTGAGGAAAGGAAGAGGGGAAACCAGAATCTGCAAAATCTACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR TCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCCCTTTGCTACATAGCTaGGGCATTTTATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: IIAVFPEALSWQSQQEEAPLLHS*GILFYH
Trigger: ATGGTAAAATAAAATGCCTCAGCTATGTAGCAAAGG...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp TTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAACCTTCCAGGCTTAAGTaGTTCTCCCACCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: FKHNHLQVGLSFLVSNLEPSRLK*FSHLRL
Trigger: TAGCCTGAGGTGGGAGAATCACTTAAGCCTGGAAGG...TTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTACAACCCAGATGAGTTaGAGTTCCCAGCTGCACGCC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSTTQMS*SSQLHA
Trigger: GGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGT...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACA +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTITSLLA*PSLLRT
Trigger: TGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAGCTTCAAGCTGCATCTaGATTGCCATTACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLASSCI*IAITRS
Trigger: GGACCGAGTAATGGCAATGCAGATGCAGCTTGAAGC...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAACTGGCCAAGTGCATCTaGCTGGCTGAAAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKLAKCI*LAESSP
Trigger: AGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAG...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp GACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTGATCACCCCTATAAGCAGCAAACATCGCTaGTCCATCCACTTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: DFPFWFQILKQQKLITPISSKHR*SIHLSY
Trigger: GTAGCTCAAGTGGATGGAGCAGCGATGTTTGCTGCT...TATAGGGGTGATCAGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCGCATTTGCTTCAAGCTaGATCTGCATTGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPAFASS*ICIAIS
Trigger: GCTAATGGCAATGCAGATGCAGCTTGAAGCAAATGC...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382643.7
CDS-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTATATCCAGGACATCACTaGCAGAGAGACCATACCTGG +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLYPGHH*QRDHTW
Trigger: CCAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATA...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCACAGCCTCCACAGTATaGAATCCAGCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPTASTV*NPASSN
Trigger: ATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGT...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCACAGCCTCCACAGTATaGAATCCAGCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QQKLITPIQCQKDYGNPVTASTV*NPASSN
Trigger: ATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGT...GACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAACGGTCAATGGGAAGCTaGCAGGTGACAGCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKRSMGS*QVTASV
Trigger: TACGCTAGCTGTCACCTGCCAGCTTCCCATTGACCG...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCAGGAGCTGGGTCTGGTaGTCTGTGTTGAACGCTCGA +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIRSWVW*SVLNAR
Trigger: TCGAGCGTTCAACACAGACCACCAGACCCAGCTCCT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCAAGTGCATCTGCCTaGCTGAAAGCTCACCTCGAC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSPSASA*LKAHLD
Trigger: GTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGG...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTGATCACCCCTATACCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DFPFWFQILKQQKLITPIPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...TATAGGGGTGATCAGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGCTTTCTTCTTCCACTaGAGTATCTGCATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQAFFFH*SICICF
Trigger: GAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGC...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACAATCTGTATGATCTCTaGCCGCCTTTGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYNLYDL*PPLVEF
Trigger: GAATTCCACCAAAGGCGGTCAGAGATCATACAGATT...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCGTCTCAATTCCACCTTaGAGTAGTTTGTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPVSIPP*SSLSSS
Trigger: AGAGCTTGACAAACTACTTCAAGGTGGAATTGAGAC...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIVTASV*QIWVFP
Trigger: TGGGAAGACCCAGATCTGTCATACGCTAGCTGTCAC...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCATGGAAACCCTGTCTTaGAATAGCTTGCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPMETLS*NSLHCN
Trigger: ATTGCAGTGCAAGCTATTTCAAGACAGGGTTTCCAT...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCAAGCTGCATCTGCATTaGCATTACTCGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIKLHLH*HYSVRS
Trigger: GCTGCGGACCGAGTAATGGCAATGCAGATGCAGCTT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCGCATTTGCTTCAAGCTaGATCTGCATTGCCATTACT +
Preference number: 4 (lower is better)
Translates to: EATETDHPYTVPKRLWKPAFASS*ICIAIT
Trigger: AGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGC...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCGCATTTGCTTCAAGCTaGATCTGCATTGCCATTACT +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPAFASS*ICIAIT
Trigger: AGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGC...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCAGCATTTATGCCACACTaGTCTAACCGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSAFMPH*SNREMG
Trigger: ACCCATTTCACGGTTAGAGCAGTGTGGCATAAATGC...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAGCATTTATGCCACACTaGTCTAACCGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQAFMPH*SNREMG
Trigger: ACCCATTTCACGGTTAGAGCAGTGTGGCATAAATGC...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCACATCGTTGGCATTTATaGCACACTGCTCTAACCGTG +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSHRWHL*HTALTV
Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAACGATG...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCAGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCAGAAACCTGGCCAAGTaGATCTGCCTGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIRNLAK*ICLAES
Trigger: GCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCAATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTGCAATCTCGACTCACTaGAACTTCCACCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSAISTH*NFHLPG
Trigger: GCCTGGAAGGTGGAAGTTGCAGTGAGTCGAGATTGC...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCAACAGCCTCCACAGTATaGAATCCAGCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSTASTV*NPASSN
Trigger: ATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGT...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAACAGCCTCCACAGTATaGAATCCAGCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQTASTV*NPASSN
Trigger: ATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGT...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACTGGTTGTTGATGCATaGGCGATGATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSLVVDA*AMIFPP
Trigger: TGGAGGAAATATCATCGCCCATGCATCAACAACCAG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGTCCTCAGATACAATCTaGTTGTTGATGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRSSDTI*LLMHGR
Trigger: TCGCCCATGCATCAACAACCAGATTGTATCTGAGGA...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGCTTTCTTCTTCCACTaGAGTATCTGCATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHAFFFH*SICICF
Trigger: GAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGC...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCATTCAGTTGCAGTGGTaGAACCCATTGGAACTAATT +
Preference number: 4 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPIQLQW*NPLELI
Trigger: AATTAGTTCCAATGGGTTTCACCACTGCAACTGAAT...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATTCTGGTGGTCTGTGTTaGACGCTCGAGCATATGCTA +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYSGGLC*TLEHML
Trigger: TAGCATATGCTCGAGCGTTCAACACAGACCACCAGA...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCATACAATCTGGTTGTTaGTGCATGGGCGATGATATT +
Preference number: 4 (lower is better)
Translates to: QQKLITPIQCQKDYGNPVIQSGC*CMGDDI
Trigger: AATATCATCGCCCATGCATCAACAACCAGATTGTAT...GACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAAGAGGAAAAACCCAATaGTTCAGTCTTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQRGKTQ*FSLWHL
Trigger: GAGATGCCAAAGACTGAATCATTGGGTTTTTCCTCT...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACAGAGGAAAAACCCAATaGTTCAGTCTTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYRGKTQ*FSLWHL
Trigger: GAGATGCCAAAGACTGAATCATTGGGTTTTTCCTCT...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAATCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGACTAGTTCTAAAGACTaGGGTCCACTTGTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRTSSKD*GPLVFS
Trigger: CGAAAACACAAGTGGACCTCAGTCTTTAGAACTAGT...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532743.6
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAGCATTTGCTTCAAGCTaGATCTGCATTGCCATTACT +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQAFASS*ICIAIT
Trigger: AGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGC...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGCATTTATGCCACACTaGTCTAACCGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSAFMPH*SNREMG
Trigger: ACCCATTTCACGGTTAGAGCAGTGTGGCATAAATGC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TTAGCTTTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCATCGTTGGCATTTATaGCACACTGCTCTAACCGTG +
Preference number: 4 (lower is better)
Translates to: LAFKHNHLQVGLSFLVSNHRWHL*HTALTV
Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAACGATG...ATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAAAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTATTGGTGGAATTCAGTTaGAGTGGTGAAACCCATTGG +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLLVEFS*SGETHW
Trigger: CCAATGGGTTTCACCACTGCAACTGAATTCCACCAA...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAACAGCCTCCACAGTATaGAATCCAGCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLTASTV*NPASSN
Trigger: ATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGT...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTTCTGACCGCCTTTGGTaGAATTCAGTTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSSDRLW*NSVAVV
Trigger: CACCACTGCAACTGAATTCCACCAAAGGCGGTCAGA...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR CCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAACCGGAAGCTTTATCCTaGCAGTCACAACAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKPEALS*QSQQEE
Trigger: CTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAGCTTTCTTCTTCCACTaGAGTATCTGCATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLAFFFH*SICICF
Trigger: GAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGC...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCAATTCAGTTGCAGTGGTaGAACCCATTGGAACTAATT +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSIQLQW*NPLELI
Trigger: AATTAGTTCCAATGGGTTTCACCACTGCAACTGAAT...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp AACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAACCTGCTTGAGTTCTACCATCATGGCTaGTGCTTGATAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NQNLTQDHSDRQLKNLLEFYHHG*CLIKEL
Trigger: CAGCTCCTTTATCAAGCATCAGCCATGATGGTAGAA...CTCAAGCAGGTTTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACATACAATCTGGTTGTTaGTGCATGGGCGATGATATT +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYIQSGC*CMGDDI
Trigger: AATATCATCGCCCATGCATCAACAACCAGATTGTAT...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp GAAGCAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: EATETDHPYTVPKRLWKPYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...GGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGCCTTTGCTACATAGCTaGGGCATTTTATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: KADIIAVFPEALSWQSQQPLLHS*GILFYH
Trigger: ATGGTAAAATAAAATGCCTCAGCTATGTAGCAAAGG...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGCATTTGCTTCAAGCTaGATCTGCATTGCCATTACT +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSAFASS*ICIAIT
Trigger: AGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCATCGTTGGCATTTATaGCACACTGCTCTAACCGTG +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSHRWHL*HTALTV
Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAACGATG...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTTATCCAGGACATCACTaGCAGAGAGACCATACCTCT +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSYPGHH*QRDHTS
Trigger: AGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATA...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAATATCCAGGACATCACTaGCAGAGAGACCATACCTCT +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKYPGHH*QRDHTS
Trigger: AGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATA...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp AACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAACCTGCTTGAGGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: NQNLTQDHSDRQLKNLLEERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...CTCAAGCAGGTTTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp CAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCGTCTACAATAAGCAGTaGATACCTAGATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: QQKLITPIQCQKDYGNPVVYNKQ*IPRFYH
Trigger: ATGGTAGAATCTAGGTATGCACTGCTTATTGTAGAC...GACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAATTAGTGATTACCACTaGTACACCAAACTCATCAGC +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQISDYH*YTKLIS
Trigger: GCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAAT...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATATTAGTGATTACCACTaGTACACCAAACTCATCAGC +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHISDYH*YTKLIS
Trigger: GCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAAT...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGCTTCAAGCTGCATCTaGATTGCCATTACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSASSCI*IAITSS
Trigger: AGAACTAGTAATGGCAATGCAGATGCAGCTTGAAGC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532743.6
CDS-3UTR CCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCGCTCTAACCGTGAAATaGGTTGTGGGCCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIALTVK*VVGQSF
Trigger: AAAGCTTTGGCCCACAACCCATTTCACGGTTAGAGC...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCAATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATAATCTGTATGATCTCTaGCCGCCTTTGGTGGAATTC +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYNLYDL*PPLVEF
Trigger: GAATTCCACCAAAGGCGGTCAGAGATCATACAGATT...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp TTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGTCTCAATTCCACCTTaGAGTAGTTTGTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FKHNHLQVGLSFLVSNLEVSIPP*SSLSSS
Trigger: AGAGCTTGACAAACTACTTCAAGGTGGAATTGAGAC...TTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267868.8
CDS-3UTR TCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAATACAATCTGGTTGTTaGTGCATGGGCGATGATATT +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSIQSGC*CMGDDI
Trigger: AATATCATCGCCCATGCATCAACAACCAGATTGTAT...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAATACAATCTGGTTGTTaGTGCATGGGCGATGATATT +
Preference number: 4 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLIQSGC*CMGDDI
Trigger: AATATCATCGCCCATGCATCAACAACCAGATTGTAT...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAAGAGGAAAAACCCAATaGTTCAGTCTTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: FKHNHLQVGLSFLVSNLERGKTQ*FSLWHL
Trigger: GAGATGCCAAAGACTGAATCATTGGGTTTTTCCTCT...TTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATCCTTTGCTACATAGCTaGGGCATTTTATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHPLLHS*GILFYH
Trigger: ATGGTAAAATAAAATGCCTCAGCTATGTAGCAAAGG...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR GCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAGCATTTATGCCACACTaGTCTAACCGTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKAFMPH*SNREMG
Trigger: ACCCATTTCACGGTTAGAGCAGTGTGGCATAAATGC...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCGAACGCTCGAGCATATaGTACATTATCCAGGACATC +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIERSSI*YIIQDI
Trigger: GATGTCCTGGATAATGTAGCATATGCTCGAGCGTTC...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp AGAAAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAAGTCTACAATAAGCAGTaGATACCTAGATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: RKADIIAVFPEALSWQSQVYNKQ*IPRFYH
Trigger: ATGGTAGAATCTAGGTATGCACTGCTTATTGTAGAC...TTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACGTCTACAATAAGCAGTaGATACCTAGATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYVYNKQ*IPRFYH
Trigger: ATGGTAGAATCTAGGTATGCACTGCTTATTGTAGAC...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATATCTCCCACTCCATCTaGATTAATGGCGAACATAGC +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYISHSI*INGEHS
Trigger: GCTATGTTCGCCATTAATGCAGATGGAGTGGGAGAT...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATCAGACCCATTCCCTTTaGTACATAGCTGAGGCATTT +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYQTHSL*YIAEAF
Trigger: AAATGCCTCAGCTATGTAGCAAAGGGAATGGGTCTG...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp GACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTGATCACCCCTATATTAAGCACAATCATCTaGAAGTGGGACTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DFPFWFQILKQQKLITPILSTII*KWDFPF
Trigger: GAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAA...TATAGGGGTGATCAGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCTGGTTGTTGATGCATaGGCGATGATATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSLVVDA*AMIFPP
Trigger: TGGAGGAAATATCATCGCCCATGCATCAACAACCAG...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATTCCTCAGATACAATCTaGTTGTTGATGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYSSDTI*LLMHGR
Trigger: TCGCCCATGCATCAACAACCAGATTGTATCTGAGGA...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTTCCTCAGATACAATCTaGTTGTTGATGCATGGGCGA +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSSSDTI*LLMHGR
Trigger: TCGCCCATGCATCAACAACCAGATTGTATCTGAGGA...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTGCTTTCTTCTTCCACTaGAGTATCTGCATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSAFFFH*SICICF
Trigger: GAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGC...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTAGAGGAAAAACCCAATaGTTCAGTCTTTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSRGKTQ*FSLWHL
Trigger: GAGATGCCAAAGACTGAATCATTGGGTTTTTCCTCT...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATTCAGTTTGTGACTACTaGCCTGTCTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYSVCDY*PVSCLY
Trigger: GTATAAACAGGAGACAGGTCAGTAGTCACAAACTGA...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCACCTTTGCTACATAGCTaGGGCATTTTATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSPLLHS*GILFYH
Trigger: ATGGTAAAATAAAATGCCTCAGCTATGTAGCAAAGG...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000532743.6
ENST00000645673.2
CDS-3UTR TCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATATGGAAACCCTGTCTTaGAATAGCTTGCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYMETLS*NSLHCN
Trigger: ATTGCAGTGCAAGCTATTTCAAGACAGGGTTTCCAT...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATGCATTTGCTTCAAGCTaGATCTGCATTGCCATTACT +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYAFASS*ICIAIT
Trigger: AGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGC...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAATTAGTGATTACCACTaGTACACCAAACTCATCAGC +
Preference number: 4 (lower is better)
Translates to: FKHNHLQVGLSFLVSNLEISDYH*YTKLIS
Trigger: GCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAAT...TTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACGACAACTTAAAAACCTaGTTGAGAGTTTTACTGACA +
Preference number: 4 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYDNLKT*LRVLLT
Trigger: TGTCAGTAAAACTCTCAAGCAGGTTTTTAAGTTGTC...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp AACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAACCTGCTTGAGACAATCATCTGCAAGTaGGACTTTCCTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NQNLTQDHSDRQLKNLLETIICK*DFPFWF
Trigger: AAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGT...CTCAAGCAGGTTTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATATTCAGTTGCAGTGGTaGAACCCATTGGAACTAATT +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYIQLQW*NPLELI
Trigger: AATTAGTTCCAATGGGTTTCACCACTGCAACTGAAT...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR TCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCATACAATCTGGTTGTTaGTGCATGGGCGATGATATT +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIIQSGC*CMGDDI
Trigger: AATATCATCGCCCATGCATCAACAACCAGATTGTAT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp AACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAACCTGCTTGAGCCTTTGCTACATAGCTaGGGCATTTTATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: NQNLTQDHSDRQLKNLLEPLLHS*GILFYH
Trigger: ATGGTAAAATAAAATGCCTCAGCTATGTAGCAAAGG...CTCAAGCAGGTTTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTTTAAGCACAATCATCTaGAAGTGGGACTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSLSTII*KWDFPF
Trigger: GAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAA...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: INILDQFVTTDLSPVYTIISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAATTTCTTCACATCGTTaGCATTTATGCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKISSHR*HLCHTA
Trigger: AGCAGTGTGGCATAAATGCCAACGATGTGAAGAAAT...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGTGCCAAAAAGATTATaGAAACCCTGTCTTGAAATA +
Preference number: 4 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSVPKRL*KPCLEI
Trigger: TATTTCAAGACAGGGTTTCCATAATCTTTTTGGCAC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTACAATCATCTGCAAGTaGGACTTTCCTTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSTIICK*DFPFWF
Trigger: AAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGT...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR TCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTTACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR TCA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAATACCATCAGAAAAGCTaGTATAATAGCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKYHQKS*YNSCFP
Trigger: GGGAAAACAGCTATTATATCAGCTTTTCTGATGGTA...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATGTCTACAATAAGCAGTaGATACCTAGATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: EGINILDQFVTTDLSPVYVYNKQ*IPRFYH
Trigger: ATGGTAGAATCTAGGTATGCACTGCTTATTGTAGAC...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR GCA 90 bp TTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGACAACTTAAAAACCTaGTTGAGAGTTTTACTGACA +
Preference number: 4 (lower is better)
Translates to: FKHNHLQVGLSFLVSNLEDNLKT*LRVLLT
Trigger: TGTCAGTAAAACTCTCAAGCAGGTTTTTAAGTTGTC...TTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp TTAGCTTTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATTTGCACTGCAATAATTaGTATAAACAGCACATTCAC +
Preference number: 4 (lower is better)
Translates to: LAFKHNHLQVGLSFLVSNLHCNN*YKQHIH
Trigger: GTGAATGTGCTGTTTATAGCAATTATTGCAGTGCAA...ATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAAAGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CCA 90 bp TTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGTGCCAAAAAGATTATaGAAACCCTGTCTTGAAATA +
Preference number: 4 (lower is better)
Translates to: FKHNHLQVGLSFLVSNLEVPKRL*KPCLEI
Trigger: TATTTCAAGACAGGGTTTCCATAATCTTTTTGGCAC...TTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR GCA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTTTGCACTGCAATAATTaGTATAAACAGCACATTCAC +
Preference number: 4 (lower is better)
Translates to: YTTEGINILDQFVTTDLSLHCNN*YKQHIH
Trigger: GTGAATGTGCTGTTTATAGCAATTATTGCAGTGCAA...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS GCA 90 bp GGTCGGTCGGGCGCGGACACGCCCTGCCACGTCCGGGTTTCACACTaGGCGCGGAGGCCCCAACTGCCGCTGAGCACTGGACCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRSGADTPCHVRVSH*ARRPQLPLSTGPAR
Trigger: CCTGGCCGGTCCAGTGCTCAGCGGCAGTTGGGGCCTCCGCGCGCAGTGTGAAACCCGGACGTGGCAGGGCGTGTCCGCGCCCGACCGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526763.6
CDS TCA 90 bp GCCACGTCCGGGTTTCACACTGCGCGCGGAGGCCCCAACTGCCGCTaGGCACTGGACCGGCCAGGACGCAGGTGGGCGAGGACGAGCCGC +
Preference number: 5 (lower is better)
Translates to: ATSGFHTARGGPNCR*ALDRPGRRWARTSR
Trigger: GCGGCTCGTCCTCGCCCACCTGCGTCCTGGCCGGTCCAGTGCTCAGCGGCAGTTGGGGCCTCCGCGCGCAGTGTGAAACCCGGACGTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526763.6
CDS CCA 90 bp CCGGGTTTCACACTGCGCGCGGAGGCCCCAACTGCCGCTGAGCACTaGACCGGCCAGGACGCAGGTGGGCGAGGACGAGCCGCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PGFTLRAEAPTAAEH*TGQDAGGRGRAAAL
Trigger: CAGAGCCGCGGCTCGTCCTCGCCCACCTGCGTCCTGGCCGGTCCAGTGCTCAGCGGCAGTTGGGGCCTCCGCGCGCAGTGTGAAACCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526763.6
CDS CCA 90 bp CTGCACGCCTCGGGAAGCGCCGCACTCTCCTTAGGGCTCGGTCTCTaGCCGCTGCGCGCGGTCCGCCAGCGGCTTTCAGAATTCCCGCCA +
Preference number: 5 (lower is better)
Translates to: LHASGSAALSLGLGL*PLRAVRQRLSEFPP
Trigger: TGGCGGGAATTCTGAAAGCCGCTGGCGGACCGCGCGCAGCGGCCAGAGACCGAGCCCTAAGGAGAGTGCGGCGCTTCCCGAGGCGTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423169.6
CDS TCA 90 bp CCACTTCTCTACTCGCTTGCCCCAGCCTTCTGCGCACAACCCAGATaGGTTGCAGTTCCCAGCTGCACGCCTCGGGAAGCGCCGCACTCT +
Preference number: 5 (lower is better)
Translates to: PLLYSLAPAFCAQPR*VAVPSCTPREAPHS
Trigger: AGAGTGCGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS GCA 90 bp ACGGCCCCCAACGCCCCTGGCTTACGCTCCACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACAACCCAGATGAGTTGCAGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: TAPNAPGLRSTSLLA*PSLLRTTQMSCSSQ
Trigger: CTGGGAACTGCAACTCATCTGGGTTGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTGGAGCGTAAGCCAGGGGCGTTGGGGGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS GCA 90 bp TCTCTACTCGCTTGCCCCAGCCTTCTGCGCACAACCCAGATGAGTTaGAGTTCCCAGCTGCACGCCTCGGGAAGCGCCGCACTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SLLACPSLLRTTQMS*SSQLHASGSAALSL
Trigger: TAAGGAGAGTGCGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGCACAACCCAGATGAGTaGCAGTTCCCAGCTGCACGC +
Preference number: 5 (lower is better)
Translates to: SAWLKAHLDPSSLFCKGRHNPDE*QFPAAR
Trigger: GCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTG...CCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CAA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGCACTTCTCTACTCGCTaGCCCCAGCCTTCTGCGCAC +
Preference number: 5 (lower is better)
Translates to: PEALSWQSQQEEACREPQHFSTR*PQPSAH
Trigger: GTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTG...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCCACAACCCAGATGAGTaGCAGTTCCCAGCTGCACGC +
Preference number: 5 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPHNPDE*QFPAAR
Trigger: GCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTG...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GCCAGAGAGACCATACCTCTCAGCCACTGCCAGCAGCCGTTCTGGCCTAAAGGTGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 5 (lower is better)
Translates to: ARETIPLSHCQQPFWPKGVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...ACCTTTAGGCCAGAACGGCTGCTGGCAGTGGCTGAGAGGTATGGTCTCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531277.2
CDS-3UTR CAA 90 bp ATCAGCGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCCGCTGCTCCATCCACTaGAGCTACCACCTGATTAGT +
Preference number: 5 (lower is better)
Translates to: ISESQKHPQKPGQVHLPGRCSIH*SYHLIS
Trigger: ACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCG...GCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS CCA 90 bp CAGATACAATCTCATCAGCGAGTCGCAGAAGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGT +
Preference number: 5 (lower is better)
Translates to: QIQSHQRVAEASAET*PSASAWLKAHLDPS
Trigger: ACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGATTGTATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423169.6
CDS-3UTR CAA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGCAAGCTGCATCTGCATaGCCATTACTCGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: PEALSWQSQQEEACREPQQAASA*PLLGPQ
Trigger: CTGCGGACCGAGTAATGGCAATGCAGATGCAGCTTG...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCCAAGCTGCATCTGCATaGCCATTACTCGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPQAASA*PLLGPQ
Trigger: CTGCGGACCGAGTAATGGCAATGCAGATGCAGCTTG...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CGAGTCGCAGAAGCATCCGCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 5 (lower is better)
Translates to: RVAEASAETWPSASAWLKVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...TTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CAA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCACCAAGATCACGCTATaGCACTCCAGCCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPTKITL*HSSLAT
Trigger: TGTTGCCAGGCTGGAGTGCAATAGCGTGATCTTGGT...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382643.7
ENST00000645673.2
CDS-3UTR CAA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTACACAACCCAGATGAGTaGCAGTTCCCAGCTGCACGC +
Preference number: 5 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLHNPDE*QFPAAR
Trigger: GCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTG...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TACCACCTGATTAGTGATTACCACTGCTACACCAAACTCATCAGCGAGTCGCAGCACTTCTCTACTCGCTaGCCCCAGCCTTCTGCGCAC +
Preference number: 5 (lower is better)
Translates to: YHLISDYHCYTKLISESQHFSTR*PQPSAH
Trigger: GTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTG...CTGCGACTCGCTGATGAGTTTGGTGTAGCAGTGGTAATCACTAATCAGGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CAA 90 bp GCAGAAACCTGGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTCGACCCGAGTAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: AETWPSASAWLKAHLDPSNFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...ACTCGGGTCGAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CAA 90 bp CTGAAAGCTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTTTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: LKAHLDPSSLFCKGRWHCLLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...ACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAGCTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CAA 90 bp CCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCAGCCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: PEALSWQSQQEEACREPQPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...CTGGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp ATCTGTATGATCTCTGACCGCCTTTGGTGGAATTCAGTTGCAGTGGTGAAACCCAGGCAGGAGAATCACTaGAACCTGAGAGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: ICMISDRLWWNSVAVVKPRQENH*NLRGGG
Trigger: CCCTCCGCCTCTCAGGTTCAAGTGATTCTCCTGCCT...GGGTTTCACCACTGCAACTGAATTCCACCAAAGGCGGTCAGAGATCATACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS GCA 90 bp ATAAAGGAGCTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATaGTACATTATCCAGGACATCACTGCCAGAGAGACCATACCTGGC +
Preference number: 5 (lower is better)
Translates to: IKELGLVVCVERSSI*YIIQDITARETIPG
Trigger: GCCAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAGCTCCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CAA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 5 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTACGCTGCTCCATCCACTaGAGCTACCACCTGATTAGT +
Preference number: 5 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLRCSIH*SYHLIS
Trigger: ACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCG...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCCACAACCCAGATGAGTaGCAGTTCCCAGCTGCACGC +
Preference number: 5 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTHNPDE*QFPAAR
Trigger: GCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTG...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CAACAGAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCCACTTCTCTACTCGCTaGCCCCAGCCTTCTGCGCAC +
Preference number: 5 (lower is better)
Translates to: QQKLITPIQCQKDYGNPVHFSTR*PQPSAH
Trigger: GTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTG...GACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGCAAGCTGCATCTGCATaGCCATTAGCTCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: PREQCTLIRLQHLRFLTEQAASA*PLAPLL
Trigger: GAGAAGTGGAGCTAATGGCAATGCAGATGCAGCTTG...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382643.7
CDS-3UTR CAA 90 bp ATCTGTATGATCTCTGACCGCCTTTGGTGGAATTCAGTTGCAGTGGTGAAACCCACCAAGATCACGCTATaGCACTCCAGCCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: ICMISDRLWWNSVAVVKPTKITL*HSSLAT
Trigger: TGTTGCCAGGCTGGAGTGCAATAGCGTGATCTTGGT...GGGTTTCACCACTGCAACTGAATTCCACCAAAGGCGGTCAGAGATCATACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR CAA 90 bp CTCACCTCGACCCGAGTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: LTSTRVVCSVKGGGTVYNNFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...ATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525066.5
ENST00000531277.2
CDS-3UTR CAA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTACCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGGACTGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: LGLVVCVERSSICYIIQDCPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...GTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CAA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAAATGGCCTAGTAGGTTaGGCACAAGACTCCATAACC +
Preference number: 5 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLNGLVG*AQDSIT
Trigger: GGTTATGGAGTCTTGTGCCAAACCTACTAGGCCATT...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp TCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTGTAGAGAACCCCCCTCTGAAATGTTTCTaGTTTGAAACATGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SRKLYPGSHNRKRPVENPPLKCF*FETWSH
Trigger: GTGAGACCATGTTTCAAACAAGAAACATTTCAGAGG...GGGGTTCTCTACAGGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTACACTTCTCTACTCGCTaGCCCCAGCCTTCTGCGCAC +
Preference number: 5 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLHFSTR*PQPSAH
Trigger: GTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTG...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCCGCTGCTCCATCCACTaGAGCTACCACCTGATTAGT +
Preference number: 5 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTRCSIH*SYHLIS
Trigger: ACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCG...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GTAGTCTGTTCTGTAAAGGGCGGTGGCACTGTCTACAATAAGCAGTGCATACCTCCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: VVCSVKGGGTVYNKQCIPPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...AGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CAA 90 bp CATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTAGGCAGGAGAATCACTaGAACCTGAGAGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: HLQVGLSFLVSNLEATETRQENH*NLRGGG
Trigger: CCCTCCGCCTCTCAGGTTCAAGTGATTCTCCTGCCT...AGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645673.2
CDS CCA 90 bp CTTCAGCTTCAGGAAGACAGGGAGAGTCGTAGATTTTGCAGATTCTaGTTTCCCCTCTTCCTTTCCTCAGATACAATCTCATCAGCGAGT +
Preference number: 5 (lower is better)
Translates to: LQLQEDRESRRFCRF*FPLFLSSDTISSAS
Trigger: ACTCGCTGATGAGATTGTATCTGAGGAAAGGAAGAGGGGAAACCAGAATCTGCAAAATCTACGACTCTCCCTGTCTTCCTGAAGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423169.6
CDS-3UTR CAA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTACACAACCCAGATGAGTaGCAGTTCCCAGCTGCACGC +
Preference number: 5 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLHNPDE*QFPAAR
Trigger: GCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTG...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACAAGCTGCATCTGCATaGCCATTACTCGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSQAASA*PLLGPQ
Trigger: CTGCGGACCGAGTAATGGCAATGCAGATGCAGCTTG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GAGAACCCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: ENPREQCTLIRLQHLRFLNFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...TAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGGGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CTGGGTCTGGTGGTCTGTGTTGAACGCTCGAGCATATGCTACATTATCCAGGACCTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LGLVVCVERSSICYIIQDLGNIR*SSRQLV
Trigger: AACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG...GTCCTGGATAATGTAGCATATGCTCGAGCGTTCAACACAGACCACCAGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS-3UTR CAA 90 bp CAAGACTCCATAACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAACACTTCTCTACTCGCTaGCCCCAGCCTTCTGCGCAC +
Preference number: 5 (lower is better)
Translates to: QDSITKTLHKIIQTDNLKHFSTR*PQPSAH
Trigger: GTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTG...TTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTTATGGAGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCACAAGCTGCATCTGCATaGCCATTACTCGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSQAASA*PLLGPQ
Trigger: CTGCGGACCGAGTAATGGCAATGCAGATGCAGCTTG...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp ATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: IIAVFPEALSWQSQQEEANFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...GGCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTCCTCCAAAACCTTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: KSFLRHHVKDTSYPSSKTLLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...GGTTTTGGAGGAGGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 5 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATCGCTGCTCCATCCACTaGAGCTACCACCTGATTAGT +
Preference number: 5 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHRCSIH*SYHLIS
Trigger: ACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCG...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACGCTGCTCCATCCACTaGAGCTACCACCTGATTAGT +
Preference number: 5 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSRCSIH*SYHLIS
Trigger: ACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCTGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGCPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CCCAGGGAGCAGTGCACTCTCATTAGGCTGCAGCACTTAAGGTTTTTAACAGAGCTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: PREQCTLIRLQHLRFLTELGNIR*SSRQLV
Trigger: AACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG...CTCTGTTAAAAACCTTAAGTGCTGCAGCCTAATGAGAGTGCACTGCTCCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPLLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGTTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: KADIIAVFPEALSWQSQQLLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTGATCACCCCTATAGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 5 (lower is better)
Translates to: DFPFWFQILKQQKLITPIVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...TATAGGGGTGATCAGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 5 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCAGGCAGGAGAATCACTaGAACCTGAGAGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: INILDQFVTTDLSPVYTIRQENH*NLRGGG
Trigger: CCCTCCGCCTCTCAGGTTCAAGTGATTCTCCTGCCT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382643.7
ENST00000645673.2
CDS-3UTR CAA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCCAAGCTGCATCTGCATaGCCATTACTCGGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: INILDQFVTTDLSPVYTIQAASA*PLLGPQ
Trigger: CTGCGGACCGAGTAATGGCAATGCAGATGCAGCTTG...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGTTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRLLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATTTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHLLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTCCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: HLQVGLSFLVSNLEATETPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...AGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCTGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPCPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGGAAGAGGCCTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: YNSCFPGSFILAVTTGRGLGNIR*SSRQLV
Trigger: AACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG...GCCTCTTCCTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp ATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATAATGGCCTAGTAGGTTaGGCACAAGACTCCATAACC +
Preference number: 5 (lower is better)
Translates to: IRLSSRQLVKPKSFLRHHNGLVG*AQDSIT
Trigger: GGTTATGGAGTCTTGTGCCAAACCTACTAGGCCATT...ATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTAAGACTGAGGTCCACTaGTGTTTTCGCCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: YTTEGINILDQFVTTDLSKTEVH*CFRPSS
Trigger: GCTGCTGGGGCGAAAACACAAGTGGACCTCAGTCTT...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532743.6
CDS-3UTR CAA 90 bp CTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACCCCAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: LVKPKSFLRHHVKDTSYPNFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...GGGGTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTATTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLLLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AAAGCTGATATAATAGCTGTTTTCCCGGAAGCTTTATCCTGGCAGTCACAACAGAGTTTGTCAAGCTCTTaGGAGCCAGTAGTAATCTGT +
Preference number: 5 (lower is better)
Translates to: KADIIAVFPEALSWQSQQSLSSS*EPVVIC
Trigger: ACAGATTACTACTGGCTCCAAAGAGCTTGACAAACT...CTGTTGTGACTGCCAGGATAAAGCTTCCGGGAAAACAGCTATTATATCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR CAA 90 bp ATGACAGATCTGGGTCTTCCCAGTTCGGAATTCTCCAAACATTTCTGTGATAGAAGTTTGTCAAGCTCTTaGGAGCCAGTAGTAATCTGT +
Preference number: 5 (lower is better)
Translates to: MTDLGLPSSEFSKHFCDRSLSSS*EPVVIC
Trigger: ACAGATTACTACTGGCTCCAAAGAGCTTGACAAACT...TCTATCACAGAAATGTTTGGAGAATTCCGAACTGGGAAGACCCAGATCTGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533741.1
CDS-3UTR CAA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCGTCTGGTGGTCTGTGTaGAACGCTCGAGCATATGCT +
Preference number: 5 (lower is better)
Translates to: INILDQFVTTDLSPVYTIVWWSV*NARAYA
Trigger: AGCATATGCTCGAGCGTTCAACACAGACCACCAGAC...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCGCTGCTCCATCCACTaGAGCTACCACCTGATTAGT +
Preference number: 5 (lower is better)
Translates to: YTTEGINILDQFVTTDLSRCSIH*SYHLIS
Trigger: ACTAATCAGGTGGTAGCTCAAGTGGATGGAGCAGCG...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCATACTGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: QLVKPKSFLRHHVKDTSYCPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...GTATGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GAAACTGATCACCCCTATACAGTGCCAAAAAGATTATGGAAACCCTGTCTTGAATGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: ETDHPYTVPKRLWKPCLECPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...TTCAAGACAGGGTTTCCATAATCTTTTTGGCACTGTATAGGGGTGATCAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTACCAAGATCACGCTATaGCACTCCAGCCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: YTTEGINILDQFVTTDLSTKITL*HSSLAT
Trigger: TGTTGCCAGGCTGGAGTGCAATAGCGTGATCTTGGT...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382643.7
ENST00000645673.2
CDS-3UTR CAA 90 bp AACCAAAACCTTACACAAGATCATTCAGACAGACAACTTAAAAACCTGCTTGAGTTATTAGCTCCTTCTTaGGCGCATAGGCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: NQNLTQDHSDRQLKNLLELLAPS*AHRQQP
Trigger: AGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA...CTCAAGCAGGTTTTTAAGTTGTCTGTCTGAATGATCTTGTGTAAGGTTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp GGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAGGAGTTTGTCAAGCTCTTaGGAGCCAGTAGTAATCTGT +
Preference number: 5 (lower is better)
Translates to: GNIRLSSRQLVKPKSFLRSLSSS*EPVVIC
Trigger: ACAGATTACTACTGGCTCCAAAGAGCTTGACAAACT...CCTTAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR CAA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATGTCCAGTAGACAGCTaGTTAAACCCAAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSCPVDS*LNPSHS
Trigger: GGAATGACTTGGGTTTAACAAGCTGTCTACTGGACA...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AGACAGCTTGTTAAACCCAAGTCATTCCTAAGGCACCATGTCAAAGATACTTCACAAGCTGCATCTGCATaGCCATTACTAGTTCTAAAG +
Preference number: 5 (lower is better)
Translates to: RQLVKPKSFLRHHVKDTSQAASA*PLLVLK
Trigger: CTTTAGAACTAGTAATGGCAATGCAGATGCAGCTTG...TGAAGTATCTTTGACATGGTGCCTTAGGAATGACTTGGGTTTAACAAGCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532743.6
CDS-3UTR CAA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTAAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLNFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp AGTTCTCTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCAAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: SSLGNIRLSSRQLVKPKSNFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...TGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAGAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp GACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTGATCACCCCTATAAGTTTGTCAAGCTCTTaGGAGCCAGTAGTAATCTGT +
Preference number: 5 (lower is better)
Translates to: DFPFWFQILKQQKLITPISLSSS*EPVVIC
Trigger: ACAGATTACTACTGGCTCCAAAGAGCTTGACAAACT...TATAGGGGTGATCAGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267868.8
CDS-3UTR CAA 90 bp GAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATCCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: EGINILDQFVTTDLSPVYPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...ATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp TACACTACAGAAGGAATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCAATGATTCAGTCTTaGGCATCTCCCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: YTTEGINILDQFVTTDLSPMIQS*ASPTPS
Trigger: AGATGGAGTGGGAGATGCCAAAGACTGAATCATTGG...AGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTATTCCTTCTGTAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp CATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATCTTGAAGCAACAGAAACTCCTCTGAAATGTTTCTaGTTTGAAACATGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: HLQVGLSFLVSNLEATETPLKCF*FETWSH
Trigger: GTGAGACCATGTTTCAAACAAGAAACATTTCAGAGG...AGTTTCTGTTGCTTCAAGATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp TTAGCTTTTAAGCACAATCATCTGCAAGTGGGACTTTCCTTTCTGGTTTCAAATAATTTCTTCACATCGTaGGCATTTATGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: LAFKHNHLQVGLSFLVSNNFFTS*AFMPHC
Trigger: GCAGTGTGGCATAAATGCCAACGATGTGAAGAAATT...ATTTGAAACCAGAAAGGAAAGTCCCACTTGCAGATGATTGTGCTTAAAAGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267868.8
ENST00000645673.2
CDS-3UTR CAA 90 bp CTTGGAAACATAAGATTGTCCAGTAGACAGCTTGTTAAACCCAAGTCATTCCTACTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LGNIRLSSRQLVKPKSFLLGNIR*SSRQLV
Trigger: AACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG...TAGGAATGACTTGGGTTTAACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS-3UTR CAA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCAGTTTGTCAAGCTCTTaGGAGCCAGTAGTAATCTGT +
Preference number: 5 (lower is better)
Translates to: INILDQFVTTDLSPVYTISLSSS*EPVVIC
Trigger: ACAGATTACTACTGGCTCCAAAGAGCTTGACAAACT...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
CDS-3UTR CAA 90 bp ATAAACATTTTAGATCAGTTTGTGACTACTGACCTGTCTCCTGTTTATACCATCCTTGGAAACATAAGATaGTCCAGTAGACAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: INILDQFVTTDLSPVYTILGNIR*SSRQLV
Trigger: AACAAGCTGTCTACTGGACAATCTTATGTTTCCAAG...GATGGTATAAACAGGAGACAGGTCAGTAGTCACAAACTGATCTAAAATGTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000532743.6
ENST00000557850.5
ENST00000645673.2
CDS GCA 72 bp CCAGCAGCTGAGGGTCGGTCGGGCGCGGACACGCCCTaGCACGTCCGGGTTTCACACTGCGCGCGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PAAEGRSGADTP*HVRVSHCARRP
Trigger: GGGCCTCCGCGCGCAGTGTGAAACCCGGACGTGGCAGGGCGTGTCCGCGCCCGACCGACCCTCAGCTGCTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526763.6
CDS CCA 72 bp ACACTGCGCGCGGAGGCCCCAACTGCCGCTGAGCACTaGACCGGCCAGGACGCAGGTGGGCGAGGACGAGCC +
Preference number: 6 (lower is better)
Translates to: TLRAEAPTAAEH*TGQDAGGRGRA
Trigger: GGCTCGTCCTCGCCCACCTGCGTCCTGGCCGGTCCAGTGCTCAGCGGCAGTTGGGGCCTCCGCGCGCAGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526763.6
CDS TCA 72 bp GGGTTTCACACTGCGCGCGGAGGCCCCAACTGCCGCTaGGCACTGGACCGGCCAGGACGCAGGTGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: GFHTARGGPNCR*ALDRPGRRWAR
Trigger: CCTCGCCCACCTGCGTCCTGGCCGGTCCAGTGCTCAGCGGCAGTTGGGGCCTCCGCGCGCAGTGTGAAACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526763.6
CDS GCA 72 bp GGCGCGGACACGCCCTGCCACGTCCGGGTTTCACACTaGGCGCGGAGGCCCCAACTGCCGCTGAGCACTGGA +
Preference number: 6 (lower is better)
Translates to: GADTPCHVRVSH*ARRPQLPLSTG
Trigger: TCCAGTGCTCAGCGGCAGTTGGGGCCTCCGCGCGCAGTGTGAAACCCGGACGTGGCAGGGCGTGTCCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526763.6
CDS CCA 72 bp TCGGGAAGCGCCGCACTCTCCTTAGGGCTCGGTCTCTaGCCGCTGCGCGCGGTCCGCCAGCGGCTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: SGSAALSLGLGL*PLRAVRQRLSE
Trigger: TTCTGAAAGCCGCTGGCGGACCGCGCGCAGCGGCCAGAGACCGAGCCCTAAGGAGAGTGCGGCGCTTCCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000557850.5
ENST00000645673.2
CDS CAA 90 bp TTCTCTACTCGCTTGCCCCAGCCTTCTGCGCACAACCCAGATGAGTaGCAGTTCCCAGCTGCACGCCTCGGGAAGCGCCGCACTCTCCTT +
Preference number: 6 (lower is better)
Translates to: FSTRLPQPSAHNPDE*QFPAARLGKRRTLL
Trigger: AAGGAGAGTGCGGCGCTTCCCGAGGCGTGCAGCTGGGAACTGCAACTCATCTGGGTTGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267868.8
ENST00000382643.7
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS GCA 72 bp AACGCCCCTGGCTTACGCTCCACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACAACCCAGATGAGTTGC +
Preference number: 6 (lower is better)
Translates to: NAPGLRSTSLLA*PSLLRTTQMSC
Trigger: GCAACTCATCTGGGTTGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTGGAGCGTAAGCCAGGGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS CAA 72 bp CAACGCCCCTGGCTTACGCTCCACTTCTCTACTCGCTaGCCCCAGCCTTCTGCGCACAACCCAGATGAGTTG +
Preference number: 6 (lower is better)
Translates to: QRPWLTLHFSTR*PQPSAHNPDEL
Trigger: CAACTCATCTGGGTTGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTGGAGCGTAAGCCAGGGGCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS CCA 72 bp TCTCATCAGCGAGTCGCAGAAGCATCCGCAGAAACCTaGCCAAGTGCATCTGCCTGGCTGAAAGCTCACCTC +
Preference number: 6 (lower is better)
Translates to: SHQRVAEASAET*PSASAWLKAHL
Trigger: GAGGTGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423169.6
CDS GCA 72 bp ATCTGCATTGCCATTAGCTCCACTTCTCTACTCGCTTaGCCCAGCCTTCTGCGCACAACCCAGATGAGTTGC +
Preference number: 6 (lower is better)
Translates to: ICIAISSTSLLA*PSLLRTTQMSC
Trigger: GCAACTCATCTGGGTTGTGCGCAGAAGGCTGGGGCAAGCGAGTAGAGAAGTGGAGCTAATGGCAATGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382643.7
CDS TCA 72 bp CAGAGAGACCATACCTGGCAGGTGACAGCTAGCGTATaGCAGATCTGGGTCTTCCCAGTTCGGAATTCTCCA +
Preference number: 6 (lower is better)
Translates to: QRDHTWQVTASV*QIWVFPVRNSP
Trigger: TGGAGAATTCCGAACTGGGAAGACCCAGATCTGTCATACGCTAGCTGTCACCTGCCAGGTATGGTCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS GCA 72 bp ACGCTCGAGCATATGCTACATTATCCAGGACATCACTaGCAGAGAGACCATACCTGGCAGGTGACAGCTAGC +
Preference number: 6 (lower is better)
Translates to: TLEHMLHYPGHH*QRDHTWQVTAS
Trigger: GCTAGCTGTCACCTGCCAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATAATGTAGCATATGCTCGAGCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525066.5
CDS GCA 72 bp TCCACTGAAGTATCTGCATTTGCTTCAAGCTGCATCTaGATTGCCATTACTCGGTCCGCAGCGCTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: STEVSAFASSCI*IAITRSAALLS
Trigger: AGAGAGGAGCGCTGCGGACCGAGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS GCA 72 bp ACGCTCGAGCATATGCTACATTATCCAGGACATCACTaGCAGAGAGACCATACCTCTCAGCCACTGCCAGAA +
Preference number: 6 (lower is better)
Translates to: TLEHMLHYPGHH*QRDHTSQPLPE
Trigger: TTCTGGCAGTGGCTGAGAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATAATGTAGCATATGCTCGAGCGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557850.5
CDS GCA 72 bp TCTTCTTCCACTGAAGTATCTGCATTTGCTTCAAGCTaGATCTGCATTGCCATTACTCGGTCCGCAGCGCTC +
Preference number: 6 (lower is better)
Translates to: SSSTEVSAFASS*ICIAITRSAAL
Trigger: GAGCGCTGCGGACCGAGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGAAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267868.8
ENST00000423169.6
ENST00000525066.5
ENST00000557850.5
ENST00000645673.2
CDS GCA 72 bp TCCACTGAAGTATCTGCATTTGCTTCAAGCTGCATCTaGATTGCCATTAGCTCCACTTCTCTACTCGCTTGC +
Preference number: 6 (lower is better)
Translates to: STEVSAFASSCI*IAISSTSLLAC
Trigger: GCAAGCGAGTAGAGAAGTGGAGCTAATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382643.7
CDS GCA 72 bp TCCACTGAAGTATCTGCATTTGCTTCAAGCTGCATCTaGATTGCCATTACGAGTTGCCGTCTTCTGTTTACC +
Preference number: 6 (lower is better)
Translates to: STEVSAFASSCI*IAITSCRLLFT
Trigger: GGTAAACAGAAGACGGCAACTCGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527860.5
CDS GCA 72 bp TCTTCTTCCACTGAAGTATCTGCATTTGCTTCAAGCTaGATCTGCATTGCCATTACGAGTTGCCGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: SSSTEVSAFASS*ICIAITSCRLL
Trigger: CAGAAGACGGCAACTCGTAATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGAAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527860.5
CDS GCA 72 bp TCTTCTTCCACTGAAGTATCTGCATTTGCTTCAAGCTaGATCTGCATTGCCATTAGCTCCACTTCTCTACTC +
Preference number: 6 (lower is better)
Translates to: SSSTEVSAFASS*ICIAISSTSLL
Trigger: GAGTAGAGAAGTGGAGCTAATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382643.7