RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAD50 (Homo sapiens)

Ensembl gene IDs: ENSG00000113522

Ensembl transcript IDs: ENST00000378823.8, ENST00000416135.5, ENST00000423956.5, ENST00000434288.1, ENST00000453394.5, ENST00000455677.1, ENST00000496204.1, ENST00000533482.5, ENST00000651160.1, ENST00000651249.1, ENST00000651541.1, ENST00000651658.1, ENST00000651723.1, ENST00000652016.1, ENST00000652485.1

Found 920 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCCAGGTCTGGTTGGACCCTACAGGGAGCAGGCCTTGACTCTGTaGGTGAGCCTGGCTTGCCTTCCACATGGCAATGCCCACTTAGAG +
Preference number: 1 (lower is better)
Translates to: LPGLVGPYREQALTL*VSLACLPHGNAHLE
Trigger: CTCTAAGTGGGCATTGCCATGTGGAAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTGCTCCCTGTAGGGTCCAACCAGACCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 90 bp GTCTCGGCTGTACTGCTGAACCCTGAAGGCCTGACAGAGGCTGCCTaGAATGGGATGAAGAGCAGCAAATCAGAAACAGGCAATCTGTCC +
Preference number: 1 (lower is better)
Translates to: VSAVLLNPEGLTEAA*NGMKSSKSETGNLS
Trigger: GGACAGATTGCCTGTTTCTGATTTGCTGCTCTTCATCCCATTCCAGGCAGCCTCTGTCAGGCCTTCAGGGTTCAGCAGTACAGCCGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR CCA 90 bp GGAGCAGGCCTTGACTCTGTGAGTGAGCCTGGCTTGCCTTCCACATaGCAATGCCCACTTAGAGAGGAATCAGGATTGATGGTGAAGCCA +
Preference number: 1 (lower is better)
Translates to: GAGLDSVSEPGLPST*QCPLREESGLMVKP
Trigger: TGGCTTCACCATCAATCCTGATTCCTCTCTAAGTGGGCATTGCCATGTGGAAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 90 bp GAAGCCAGAAAGGCACCTATCCCACCTCCAAACCCATGGGCTTCTTaGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCAC +
Preference number: 1 (lower is better)
Translates to: EARKAPIPPPNPWAS*NESSHSQKCCQGCH
Trigger: GTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTTTCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 90 bp GGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAAGGTGGGTGTaGACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTG +
Preference number: 1 (lower is better)
Translates to: GQIRPQVVRAFQRWV*TVENFLSVERALSL
Trigger: CAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 90 bp CACGATGGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAAGGTaGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTG +
Preference number: 1 (lower is better)
Translates to: HDGQIRPQVVRAFQR*VCTVENFLSVERAL
Trigger: CAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATaGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAAGGTGGGT +
Preference number: 1 (lower is better)
Translates to: ATQDRRRGVLQASSR*ADQASSGQSFPKVG
Trigger: ACCCACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 90 bp ATAACTTGCTCAAGGTCCCCAGCTAGTGAGTGGTGTGCTAGGATTTaGGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTG +
Preference number: 1 (lower is better)
Translates to: ITCSRSPASEWCARI*AQAVWLILTSIHAV
Trigger: CACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATCCTAGCACACCACTCACTAGCTGGGGACCTTGAGCAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 90 bp AGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTaGTCAGAGCTTTCCAAAGGTGGGTGTGCACAGTGGAGAATTTCC +
Preference number: 1 (lower is better)
Translates to: RSVTGFFTMGRSGLK*SELSKGGCAQWRIS
Trigger: GGAAATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 90 bp CAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAATaGGGAGGAAACAGCAAAGGAAACGGGATGTGCAGGTGTTGCAGG +
Preference number: 1 (lower is better)
Translates to: QTLSTKTCDIEGPGK*GGNSKGNGMCRCCR
Trigger: CCTGCAACACCTGCACATCCCGTTTCCTTTGCTGTTTCCTCCTCATTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 90 bp CCAAACCCATGGGCTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTaGTGCCAAGGATGCCACATATTCAGGGGGAAACCAGATTTAAAA +
Preference number: 1 (lower is better)
Translates to: PNPWASWNESSHSQK*CQGCHIFRGKPDLK
Trigger: TTTTAAATCTGGTTTCCCCCTGAATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 90 bp GCTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATaGCACATATTCAGGGGGAAACCAGATTTAAAATTGGGAAGTCTG +
Preference number: 1 (lower is better)
Translates to: ASWNESSHSQKCCQG*HIFRGKPDLKLGSL
Trigger: CAGACTTCCCAATTTTAAATCTGGTTTCCCCCTGAATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 90 bp AACCCATGGGCTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTaGCAAGGATGCCACATATTCAGGGGGAAACCAGATTTAAAATTG +
Preference number: 1 (lower is better)
Translates to: NPWASWNESSHSQKC*QGCHIFRGKPDLKL
Trigger: CAATTTTAAATCTGGTTTCCCCCTGAATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 90 bp AGCATGTGCAAGAGATTCAATGTTTTCTCGGTCAAGATTTGTTGTTaGCTCATCCAAGGCAATGATGCCACAGTTGAGGCAGAACGTTTC +
Preference number: 1 (lower is better)
Translates to: SMCKRFNVFSVKICC*LIQGNDATVEAERF
Trigger: GAAACGTTCTGCCTCAACTGTGGCATCATTGCCTTGGATGAGCCAACAACAAATCTTGACCGAGAAAACATTGAATCTCTTGCACATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR TCA 90 bp TCCACATATTCAGAACGTCCTAAAAGCTCCACAAAATCTTCATCATaGGTGATTACCAGAAGCTGGAAGTTACGCTGCTGTGAGCGACTT +
Preference number: 1 (lower is better)
Translates to: STYSERPKSSTKSSS*VITRSWKLRCCERL
Trigger: AAGTCGCTCACAGCAGCGTAACTTCCAGCTTCTGGTAATCACTCATGATGAAGATTTTGTGGAGCTTTTAGGACGTTCTGAATATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR CCA 90 bp GTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGT +
Preference number: 1 (lower is better)
Translates to: VSNLCCFSCFSWLTC*TVRSKSIPCSLAAC
Trigger: ACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR TCA 90 bp CATTGGCTGCTTTCTCTTTCATACACAATTTCCCCAATTTCCTACTaGTTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCTGGGA +
Preference number: 1 (lower is better)
Translates to: HWLLSLSYTISPISY*LLSREALFYALLLG
Trigger: TCCCAGAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAAGCAGCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 90 bp CTACAAAGCATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTaGAATGGAAGGATTCAAGATGTCAGCTGGCAATTCCAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: LQSIIQKRVTWLHSV*NGRIQDVSWQFQEK
Trigger: TTTTTCCTGGAATTGCCAGCTGACATCTTGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATGCTTTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 90 bp TCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTaGAGCATTGTTTTACGCTCTGCTTCTGGGAGAACCCAAACTAAG +
Preference number: 1 (lower is better)
Translates to: SFIHNFPNFLLITFT*SIVLRSASGRTQTK
Trigger: CTTAGTTTGGGTTCTCCCAGAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 90 bp TGCAGCTGTAGACGACCCTGTTCAACAAGCAGTTCTGATTTTTCCTaGTTGAGAAGCCTAGATTCTTTATTTAGTTTTTCCAGTTCACGA +
Preference number: 1 (lower is better)
Translates to: CSCRRPCSTSSSDFS*LRSLDSLFSFSSSR
Trigger: TCGTGAACTGGAAAAACTAAATAAAGAATCTAGGCTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAACAGGGTCGTCTACAGCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR TCA 90 bp ATGAACATTGAATCCCAGGGAGCTAACACTGCATTTCACAATCTCTaGGCACTGATCGATGTTCTTTTTAATCCTGTAGAATTTCTCCAC +
Preference number: 1 (lower is better)
Translates to: MNIESQGANTAFHNL*ALIDVLFNPVEFLH
Trigger: GTGGAGAAATTCTACAGGATTAAAAAGAACATCGATCAGTGCTCAGAGATTGTGAAATGCAGTGTTAGCTCCCTGGGATTCAATGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR CCA 90 bp TTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGC +
Preference number: 1 (lower is better)
Translates to: LLETVSNLCCFSCFS*LTCWTVRSKSIPCS
Trigger: GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR TCA 90 bp CAGCATCACCACTCGGTAGTTATAATTCCGCCTTTTATCAGAAGCTaGTACATTTTCATCGGCATCAGACCGTATTTCTATGTATTCAAT +
Preference number: 1 (lower is better)
Translates to: QHHHSVVIIPPFIRS*YIFIGIRPYFYVFN
Trigger: ATTGAATACATAGAAATACGGTCTGATGCCGATGAAAATGTATCAGCTTCTGATAAAAGGCGGAATTATAACTACCGAGTGGTGATGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR CCA 90 bp CAGGCAGCTGAATATATCAGTCAAGCATTTAGGAGAGATCTGGATTaGACACAAACATTTATGAGTTATCAGTGTATAGATGGTGGTTGT +
Preference number: 1 (lower is better)
Translates to: QAAEYISQAFRRDLD*TQTFMSYQCIDGGC
Trigger: ACAACCACCATCTATACACTGATAACTCATAAATGTTTGTGTCCAATCCAGATCTCTCCTAAATGCTTGACTGATATATTCAGCTGCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR TCA 90 bp AGAGCCCCAATTAAACTGAAGCAAGAACAAGTATCAAATTTATGGTaGAGTGTGGGTGGAAGAATGGTGAAATCATTGATACTTTACAAC +
Preference number: 1 (lower is better)
Translates to: RAPIKLKQEQVSNLW*SVGGRMVKSLILYN
Trigger: GTTGTAAAGTATCAATGATTTCACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGCTTCAGTTTAATTGGGGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434288.1
3UTR CAA 90 bp TGGACCCTACAGGGAGCAGGCCTTGACTCTGTGAGTGAGCCTGGCTaGCCTTCCACATGGCAATGCCCACTTAGAGAGGAATCAGGATTG +
Preference number: 2 (lower is better)
Translates to: WTLQGAGLDSVSEPG*PSTWQCPLREESGL
Trigger: CAATCCTGATTCCTCTCTAAGTGGGCATTGCCATGTGGAAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTGCTCCCTGTAGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCACTGTTCTTCCAGGTCTaGTTGGACCCTACAGGGAGC +
Preference number: 2 (lower is better)
Translates to: SQLTAALNPQTPGILSQPLFFQV*LDPTGS
Trigger: GCTCCCTGTAGGGTCCAACCAGACCTGGAAGAACAG...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGTGTACTGCTGAACCCTaGAGGCCTGACAGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLCTAEP*RPDRGC
Trigger: GCAGCCTCTGTCAGGCCTTCAGGGTTCAGCAGTACA...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR-3UTR TCA 90 bp ACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAAGACCATGCCATGTGACTaGATCAAGACCCGGTATGGT +
Preference number: 2 (lower is better)
Translates to: TAHCSLEPSDSRDPISAKTMPCD*IKTRYG
Trigger: ACCATACCGGGTCTTGATTCAGTCACATGGCATGGT...CTTGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR GCA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCGAAGAAGCATGCATTTaGACTGGGGAGGGAGGCACA +
Preference number: 2 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGEEACI*TGEGGT
Trigger: TGTGCCTCCCTCCCCAGTGCAAATGCATGCTTCTTC...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR-3UTR CCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAAGAGGCTGCCTGGAATaGGATGAAGAGCAGCAAATC +
Preference number: 2 (lower is better)
Translates to: SQLTAALNPQTPGILSQPRGCLE*DEEQQI
Trigger: GATTTGCTGCTCTTCATCCCATTCCAGGCAGCCTCT...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR CAA 90 bp CGGTCAAGATTTGTTGTTGGCTCATCCAAGGCAATGATGCCACAGTaGAGGCAGAACGTTTCAGCCAGGGCCAGGCGAATGATGAGTGAG +
Preference number: 2 (lower is better)
Translates to: RSRFVVGSSKAMMPQ*RQNVSARARRMMSE
Trigger: CTCACTCATCATTCGCCTGGCCCTGGCTGAAACGTTCTGCCTCAACTGTGGCATCATTGCCTTGGATGAGCCAACAACAAATCTTGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR TCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAGGGATATTTGGAGACTaGTCTAGAAGCAGCAATGAG +
Preference number: 2 (lower is better)
Translates to: SQLTAALNPQTPGILSQPGIFGD*SRSSNE
Trigger: CTCATTGCTGCTTCTAGATCAGTCTCCAAATATCCC...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR GCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAAAAAGGAAACGGGATGTaGAGGTGTTGCAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKKGNGM*RCCREE
Trigger: CTCCTCCCTGCAACACCTGCACATCCCGTTTCCTTT...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCACAAAAGCGTGTGACTTaGTTGCATTCTGTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: SQLTAALNPQTPGILSQPQKRVT*LHSVWN
Trigger: ATTCCACACAGAATGCAACCAAGTCACACGCTTTTG...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCCTGGCTGACTCTGAATaGCAAAACTCTACAAAGCAT +
Preference number: 2 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGLADSE*QNSTKH
Trigger: ATGCTTTGTAGAGTTTTGTCATTCAGAGTCAGCCAG...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGGCTAAAGTCACACAGTaGGTAAGTTGTAGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: QINYALPHGHKSQHFITPAKVTQ*VSCRAR
Trigger: CCTGGCTCTACAACTTACTCACTGTGTGACTTTAGC...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAACCTTCCACATGGCAATaGCCACTTAGAGAGGAATCA +
Preference number: 2 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKPSTWQ*PLREES
Trigger: TGATTCCTCTCTAAGTGGGCATTGCCATGTGGAAGG...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR GCA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGACATCCTTCCGAGACTaGTTCAGGCAAACTCCTAAG +
Preference number: 2 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLTSFRD*FRQTPK
Trigger: CTTAGGAGTTTGCCTGAAGCAGTCTCGGAAGGATGT...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR CCA 90 bp CTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCACATATCATCTGAAGAGCAAATaGAGAGGCCTGTTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: LLGMKAATLRSAAKDATYHLKSK*RGLFFQ
Trigger: CTGGAAGAACAGGCCTCTCCATTTGCTCTTCAGATG...ATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CCA 90 bp GGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTGGCTCCAGCCAGCATaGCTCGCTGTTTTGATGATT +
Preference number: 2 (lower is better)
Translates to: GYHKHQTACLRNWTTALPWLQPA*LAVLMI
Trigger: AATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCA...AGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR GCA 90 bp AGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAAGTTTTCCTTAACAGTTACCTaGCAGTCCTACTCATGGGCC +
Preference number: 2 (lower is better)
Translates to: SLLLQLLTTLQISGYLKFSLTVT*QSYSWA
Trigger: GGCCCATGAGTAGGACTGGCAGGTAACTGTTAAGGA...AAACTTCAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR-3UTR GCA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAAGGTCGCTGTAGCCTaGAGGCCACACCCTAAGGCA +
Preference number: 2 (lower is better)
Translates to: MSFFRRCMSLLTFCSLFLKVAVA*RPHPKA
Trigger: TGCCTTAGGGTGTGGCCTGCAGGCTACAGCGACCTT...AAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR CCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCCAGGCTTCTTCACGATaGGCAGATCAGGCCTCAAGT +
Preference number: 2 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFQASSR*ADQASS
Trigger: ACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTG...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CCA 90 bp AGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAAGTTTTGGCTCCAGCCAGCATaGCTCGCTGTTTTGATGATT +
Preference number: 2 (lower is better)
Translates to: SLLLQLLTTLQISGYLKFWLQPA*LAVLMI
Trigger: AATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCA...AAACTTCAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CCA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCAAGGGCCTACACCTGTaGAGCCCTAGGGACGCTTCT +
Preference number: 2 (lower is better)
Translates to: NFSNVVSKGLTCSLASFIKGLHL*SPRDAS
Trigger: AGAAGCGTCCCTAGGGCTCCACAGGTGTAGGCCCTT...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR TCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGCTCCTCCAGTTGCTaGCGACGTTGCAAATTAGTG +
Preference number: 2 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAACSSSC*RRCKLV
Trigger: CACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCA...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAANCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CCA 90 bp CTGTGTCTCCCTTCAGCATCACCACTCGGTAGTTATAATTCCGCCTTTTATCAGTGTCAGCTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 2 (lower is better)
Translates to: LCLPSASPLGSYNSAFYQCQLCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA...CTGATAAAAGGCGGAATTATAACTACCGAGTGGTGATGCTGAAGGGAGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR CCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTGCCAGTCCTACTCATaGGCCTGCTCCCAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSCQSYS*ACSQKN
Trigger: ATTTTTCTGGGAGCAGGCCCATGAGTAGGACTGGCA...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR-3UTR CCA 90 bp CTCCATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTGGCTCCAGCCAGCATaGCTAAAGTCACACAGTGAG +
Preference number: 2 (lower is better)
Translates to: LHNCNICQAYFGTFFFRHWLQPA*LKSHSE
Trigger: CTCACTGTGTGACTTTAGCCATGCTGGCTGGAGCCA...ATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
3UTR-3UTR CCA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCATGGCTCCAGCCAGCATaGCTAAAGTCACACAGTGAG +
Preference number: 2 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSWLQPA*LKSHSE
Trigger: CTCACTGTGTGACTTTAGCCATGCTGGCTGGAGCCA...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
3UTR CAA 90 bp ACCATAAATTTTCAAGGCAGTAATTATCTCCTTCTCAACAGTGCTTaGAGAAGAAGCATGCATTTGCACTGGGGAGGGAGGCACAGAGTC +
Preference number: 2 (lower is better)
Translates to: TINFQGSNYLLLNSA*RRSMHLHWGGRHRV
Trigger: GACTCTGTGCCTCCCTCCCCAGTGCAAATGCATGCTTCTTCTCAAAGCACTGTTGAGAAGGAGATAATTACTGCCTTGAAAATTTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR CAA 90 bp TGTCAGCTTTGTCTTTGGTCAGCATCTCCATTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACGCA +
Preference number: 2 (lower is better)
Translates to: CQLCLWSASPFGYVL*YDGLTAPSPGQVYA
Trigger: TGCGTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR TCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGCAGGCCTTGACTCTGTaGGTGAGCCTGGCTTGCCTT +
Preference number: 2 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKQALTL*VSLACL
Trigger: AAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTG...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCCAAAACCATGCCATGTaGCTGAATCAAGACCCGGTA +
Preference number: 2 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFQNHAM*LNQDPV
Trigger: TACCGGGTCTTGATTCAGTCACATGGCATGGTTTTG...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCCCTCCATCCATGCTGTaGTGGCTATTCATTCCAATG +
Preference number: 2 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFPPSML*WLFIPM
Trigger: CATTGGAATGAATAGCCATCACAGCATGGATGGAGG...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTCTCACATCTGTTTCTTaGGCAACCTTGGGATCGTGT +
Preference number: 2 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVLTSVS*ATLGSC
Trigger: ACACGATCCCAAGGTTGCTCAAGAAACAGATGTGAG...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR CAA 90 bp CTTTGTCAGCTTTGTCTTTGGTCAGCATCTCCATTTGGGTACGTGTaGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: LCQLCLWSASPFGYV*LYDGLTAPSPGQVY
Trigger: GTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAATGGAGATGCTGACCAAAGACAAAGCTGACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR CAA 90 bp CCTTTTCACCATGCCATAGATCTTTGCACAGCTATAAGTTCTCCATaGACATCACGAAATTGCAGACGAATCTGGGCTCTCACATCTGTT +
Preference number: 2 (lower is better)
Translates to: PFHHAIDLCTAISSP*TSRNCRRIWALTSV
Trigger: AACAGATGTGAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAATGGAGAACTTATAGCTGTGCAAAGATCTATGGCATGGTGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR TCA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATCAAAACCATGCCATGTaGCTGAATCAAGACCCGGTA +
Preference number: 2 (lower is better)
Translates to: RSTGIRETTCEKAIESMDQNHAM*LNQDPV
Trigger: TACCGGGTCTTGATTCAGTCACATGGCATGGTTTTG...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp CTGTGTCTCCCTTCAGCATCACCACTCGGTAGTTATAATTCCGCCTTTTATCAGAAACCCCAAGAGAACTaGTCATTTCTCGGTCAATTT +
Preference number: 2 (lower is better)
Translates to: LCLPSASPLGSYNSAFYQKPQEN*SFLGQF
Trigger: AAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTT...CTGATAAAAGGCGGAATTATAACTACCGAGTGGTGATGCTGAAGGGAGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR TCA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCAGCTCGGATATGTTCTTaGTGGCGATCTGCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSARICS*WRSACS
Trigger: GCTGCAAGCAGATCGCCATCAAGAACATATCCGAGC...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR TCA 90 bp ACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTTGTGCTAAAGTCACACAGTaGGTAAGTTGTAGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: TCWTVRSKSIPCSLAACCAKVTQ*VSCRAR
Trigger: CCTGGCTCTACAACTTACTCACTGTGTGACTTTAGC...ACAACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
3UTR-3UTR CCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGCTGTTCTTCCAGGTCTaGTTGGACCCTACAGGGAGC +
Preference number: 2 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKLFFQV*LDPTGS
Trigger: GCTCCCTGTAGGGTCCAACCAGACCTGGAAGAACAG...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CCA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATAACCCATGGGCTTCTTaGAATGAAAGCAGCCACTCT +
Preference number: 2 (lower is better)
Translates to: RSTGIRETTCEKAIESMDNPWAS*NESSHS
Trigger: AGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTT...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CAA 90 bp CATAGATCTTTGCACAGCTATAAGTTCTCCATTGACATCACGAAATaGCAGACGAATCTGGGCTCTCACATCTGTTTCTTGAGCAACCTT +
Preference number: 2 (lower is better)
Translates to: HRSLHSYKFSIDITK*QTNLGSHICFLSNL
Trigger: AAGGTTGCTCAAGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAATGGAGAACTTATAGCTGTGCAAAGATCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR TCA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR TCA 90 bp GGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACAAACCCCAAGAGAACTaGTCATTTCTCGGTCAATTT +
Preference number: 2 (lower is better)
Translates to: GYVLLYDGLTAPSPGQVYKPQEN*SFLGQF
Trigger: AAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTT...GTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR TCA 90 bp ACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTAGAGCTCAGATCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 2 (lower is better)
Translates to: TPRELIISRSISAHLELRSLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...TCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CCA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCATGGCTCCAGCCAGCATaGCTCGCTGTTTTGATGATT +
Preference number: 2 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSWLQPA*LAVLMI
Trigger: AATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCA...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR TCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGAGCTCTGAGTCTGGATaGCCATCTGGAAGGGATATG +
Preference number: 2 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKSSESG*PSGRDM
Trigger: CATATCCCTTCCAGATGGTCATCCAGACTCAGAGCT...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR-3UTR TCA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR TCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: VSKGLTCSLASFISLYKDAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR TCA 90 bp CCCAAGAGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 2 (lower is better)
Translates to: PKSVSCSSMSFFRRCMSLSLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...TAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACTCTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR GCA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCATCTCCTTCTCAACAGTaGTTTGAGAAGAAGCATGCA +
Preference number: 2 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSSPSQQ*FEKKHA
Trigger: TGCATGCTTCTTCTCAAAGCACTGTTGAGAAGGAGA...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR-3UTR GCA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTAGTCGCAGTTTAGACTaGAAATCACTGATGACTTCT +
Preference number: 2 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSSRSLD*KSLMTS
Trigger: AGAAGTCATCAGTGATTTGCAGTCTAAACTGCGACT...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCTGGTTGCATTCTGTGTaGAATGGAAGGATTCAAGAT +
Preference number: 2 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFWLHSV*NGRIQD
Trigger: ATCTTGAATCCTTCCATTCCACACAGAATGCAACCA...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTAAGACTGAACTTCAGTaGATAATTCCACAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAAKTELQ*IIPQSA
Trigger: AGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR CAA 90 bp TCTGTCTTAAGGTCCTTAGCTTTAATCACATCTGCAAAGTTTCCTTaGCTGTATAAAGTAACAGTCACGGGTTCTAGAAATCAGGACCTG +
Preference number: 2 (lower is better)
Translates to: SVLRSLALITSAKFP*LYKVTVTGSRNQDL
Trigger: CAGGTCCTGATTTCTAGAACCCGTGACTGTTACTTTATACAGCAAAGGAAACTTTGCAGATGTGATTAAAGCTAAGGACCTTAAGACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CAA 90 bp CTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTA +
Preference number: 2 (lower is better)
Translates to: LETVSNLCCFSCFSW*TCWTVRSKSIPCSL
Trigger: TAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR TCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTCTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 2 (lower is better)
Translates to: CWSCISLRFNSILLETVSLVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR TCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTCTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 2 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTLVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR TCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTGTTGCCAAAGACTaGATTAATGAATCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAACVAKD*INESLA
Trigger: AGCTAGAGATTCATTAATTCAGTCTTTGGCAACACA...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR GCA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
3UTR-3UTR GCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTATGTACACAGAATTCTaGCTGGTTTCTGGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTMYTEF*LVSGGS
Trigger: TGAACCCCCAGAAACCAGGCAGAATTCTGTGTACAT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR-3UTR GCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTTTGACATCACGAAATTaGAGACGAATCTGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: CWSCISLRFNSILLETVSLTSRN*RRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAA...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR CCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCAAATCAAGACCCGGTATaGTCCTGGCTGACTCTGAAT +
Preference number: 2 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAANQDPV*SWLTLN
Trigger: ATTCAGAGTCAGCCAGGACCATACCGGGTCTTGATT...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTATTCTGCCTGGTTTCTaGGGGTTCATGGTCTTTGAT +
Preference number: 2 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTILPGF*GFMVFD
Trigger: ATCAAAGACCATGAACCCCCAGAAACCAGGCAGAAT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR-3UTR CCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTACACAGAATTCTGCCTaGTTTCTGGGGGTTCATGGT +
Preference number: 2 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSTQNSA*FLGVHG
Trigger: ACCATGAACCCCCAGAAACCAGGCAGAATTCTGTGT...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR CAA 90 bp TCTAATTGCCCACTTACCGTAGCTGGCTTAATAGTAAACTTTTCATaGGCTGCTTTCTCTTTCATACACAATTTCCCCAATTTCCTACTG +
Preference number: 2 (lower is better)
Translates to: SNCPLTVAGLIVNFS*AAFSFIHNFPNFLL
Trigger: CAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAAGCAGCCAATGAAAAGTTTACTATTAAGCCAGCTACGGTAAGTGGGCAATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR TCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: CWSCISLRFNSILLETVSKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 2 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVLSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR GCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTTCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 2 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVSKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 2 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR GCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTATCTCATCAAACTTTTaGTTCAAAGCCTTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAAISSNF*FKAFPS
Trigger: TGAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGAT...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 2 (lower is better)
Translates to: VSKGLTCSLASFISLYKDSLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTTCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCT +
Preference number: 2 (lower is better)
Translates to: CWSCISLRFNSILLETVSSWLTC*TVRSKS
Trigger: AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGA...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACTTTGAAGATGTTAACTaGGCTTCCTTACTTGTAATC +
Preference number: 2 (lower is better)
Translates to: VSKGLTCSLASFISLYKDFEDVN*ASLLVI
Trigger: GATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR CAA 90 bp GTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATaGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VSCSSMSFFRRCMSL*TFCSLFLNSGISFS
Trigger: GGAGAAGGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR TCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: CWSCISLRFNSILLETVSAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGCCTTCAAATCAATTATaGTTTGCCTCATGGGCACAA +
Preference number: 2 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQPSNQL*FASWAQ
Trigger: TTGTGCCCATGAGGCAAAGCATAATTGATTTGAAGG...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp ATACATTTTCATCGGCATCAGACCGTATTTCTATGTATTCAATATCTTGTCCACTCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 2 (lower is better)
Translates to: IHFHRHQTVFLCIQYLVHSKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...GTGGACAAGATATTGAATACATAGAAATACGGTCTGATGCCGATGAAAATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR GCA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACTTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 2 (lower is better)
Translates to: WSCISLRFNSILLETVSNFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CCA 90 bp CTCCATTTGCTTCTTTCGGCTATCCAAGGCTTTAATTTCATTGTCAAGTTTCATTTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTT +
Preference number: 2 (lower is better)
Translates to: LHLLLSAIQGFNFIVKFHFSCFS*LTCWTV
Trigger: AACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAA...ATGAAACTTGACAATGAAATTAAAGCCTTGGATAGCCGAAAGAAGCAAATGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGTTTCTTGAGCAACCTTaGGATCGTGTACAAATGTAT +
Preference number: 2 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLFLEQP*DRVQMY
Trigger: ATACATTTGTACACGATCCCAAGGTTGCTCAAGAAA...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR TCA 90 bp ATAACAATCATCATTTCTCTATACTTTTCCTCAGCATCCCGAAATTGTGGTTCTGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: ITIIISLYFSSASRNCGSAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...AGAACCACAATTTCGGGATGCTGAGGAAAAGTATAGAGAAATGATGATTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR GCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 2 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLLSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCAACTTCAAATTTTAGTTaGGGAAACCAAGTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAATSNFS*GNQVPE
Trigger: CTCTGGGACTTGGTTTCCCCAACTAAAATTTGAAGT...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR-3UTR CCA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 2 (lower is better)
Translates to: NFSNVVSKGLTCSLASFISLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
3UTR-3UTR CCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 2 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLSLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR CAA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTaGTTTCTTAATTCTGGTATTTCCTTCTCCTTCAAATCAATTATG +
Preference number: 2 (lower is better)
Translates to: MSFFRRCMSLLTFCS*FLNSGISFSFKSIM
Trigger: CATAATTGATTTGAAGGAGAAGGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 2 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTLSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR GCA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTATCTCATCAAACTTTTaGTTCAAAGCCTTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: IIVTSVRHTLALSSSGIIISSNF*FKAFPS
Trigger: TGAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGAT...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR TCA 72 bp CTGGTTGGACCCTACAGGGAGCAGGCCTTGACTCTGTaGGTGAGCCTGGCTTGCCTTCCACATGGCAATGCC +
Preference number: 3 (lower is better)
Translates to: LVGPYREQALTL*VSLACLPHGNA
Trigger: GGCATTGCCATGTGGAAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTGCTCCCTGTAGGGTCCAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 72 bp TTGTCCCCAGGCCAGGTCCGGACATCCTTCCGAGACTaGTTCAGGCAAACTCCTAAGGTCGCTGTAGCCTGC +
Preference number: 3 (lower is better)
Translates to: LSPGQVRTSFRD*FRQTPKVAVAC
Trigger: GCAGGCTACAGCGACCTTAGGAGTTTGCCTGAAGCAGTCTCGGAAGGATGTCCGGACCTGGCCTGGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR CCA 72 bp GGCCACACCCTAAGGCACTTTAAGGGCCTACACCTGTaGAGCCCTAGGGACGCTTCTGCTCCTAAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: GHTLRHFKGLHL*SPRDASAPKES
Trigger: ACTCTCCTTAGGAGCAGAAGCGTCCCTAGGGCTCCACAGGTGTAGGCCCTTAAAGTGCCTTAGGGTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR GCA 72 bp GGAGGAAACAGCAAAGGAAACGGGATGTGCAGGTGTTaGAGGGAGGAGGCAGAGCTGGATTCCAGTAGGGCT +
Preference number: 3 (lower is better)
Translates to: GGNSKGNGMCRC*REEAELDSSRA
Trigger: AGCCCTACTGGAATCCAGCTCTGCCTCCTCCCTGCAACACCTGCACATCCCGTTTCCTTTGCTGTTTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCTTCTTCCAGGTCTGGTaGGACCCTACAGGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGFFQVW*DPTGSR
Trigger: CCTGCTCCCTGTAGGGTCCAACCAGACCTGGAAGAA...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 72 bp ATGATGGTCAAAGGGCATCCAGTGGGAACTGAACTCTaGGTGAGCGGCGACAGCTCCCGGTATCGTGGGATT +
Preference number: 3 (lower is better)
Translates to: MMVKGHPVGTEL*VSGDSSRYRGI
Trigger: AATCCCACGATACCGGGAGCTGTCGCCGCTCACTCAGAGTTCAGTTCCCACTGGATGCCCTTTGACCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR CCA 72 bp ACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTaGTCAGAGCTTTCCAAAGGTGGGTGTGCACAGTGG +
Preference number: 3 (lower is better)
Translates to: TGFFTMGRSGLK*SELSKGGCAQW
Trigger: CCACTGTGCACACCCACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 72 bp AGAGCAAATGGAGAGGCCTGTTCTTCCAGGTCTGGTTaGACCCTACAGGGAGCAGGCCTTGACTCTGTGAGT +
Preference number: 3 (lower is better)
Translates to: RANGEACSSRSG*TLQGAGLDSVS
Trigger: ACTCACAGAGTCAAGGCCTGCTCCCTGTAGGGTCCAACCAGACCTGGAAGAACAGGCCTCTCCATTTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 72 bp TCAAGGTCCCCAGCTAGTGAGTGGTGTGCTAGGATTTaGGCCCAGGCAGTCTGGCTCATTCTAACCTCCATC +
Preference number: 3 (lower is better)
Translates to: SRSPASEWCARI*AQAVWLILTSI
Trigger: GATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATCCTAGCACACCACTCACTAGCTGGGGACCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 72 bp ACATTCAATGATGGTCAAAGGGCATCCAGTGGGAACTaGACTCTGAGTGAGCGGCGACAGCTCCCGGTATCG +
Preference number: 3 (lower is better)
Translates to: TFNDGQRASSGN*TLSERRQLPVS
Trigger: CGATACCGGGAGCTGTCGCCGCTCACTCAGAGTTCAGTTCCCACTGGATGCCCTTTGACCATCATTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR GCA 72 bp GTCAGTGCCCTGCCTATATCCTATGATCCTAGGAACTaGCAGTGTGCTCCTGCCAACTTTCAGCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VSALPISYDPRN*QCAPANFQLLL
Trigger: CAGCAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATATAGGCAGGGCACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR CCA 72 bp GTACTGCTGAACCCTGAAGGCCTGACAGAGGCTGCCTaGAATGGGATGAAGAGCAGCAAATCAGAAACAGGC +
Preference number: 3 (lower is better)
Translates to: VLLNPEGLTEAA*NGMKSSKSETG
Trigger: GCCTGTTTCTGATTTGCTGCTCTTCATCCCATTCCAGGCAGCCTCTGTCAGGCCTTCAGGGTTCAGCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR TCA 72 bp ACCTATCCCACCTCCAAACCCATGGGCTTCTTGGAATaGAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATG +
Preference number: 3 (lower is better)
Translates to: TYPTSKPMGFLE*KQPLSEVLPRM
Trigger: CATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTTTGGAGGTGGGATAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 72 bp AGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATaGTGTGATGGCTATTCATTCCAATGTGGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: SPGSLAHSNLHP*CDGYSFQCGEG
Trigger: CCCTTCCCCACATTGGAATGAATAGCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 72 bp GATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATaGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: DRRRGVLQASSR*ADQASSGQSFP
Trigger: TGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 72 bp AAGGCACCTATCCCACCTCCAAACCCATGGGCTTCTTaGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAA +
Preference number: 3 (lower is better)
Translates to: KAPIPPPNPWAS*NESSHSQKCCQ
Trigger: TTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 72 bp GAAGCCAGAAAGGCACCTATCCCACCTCCAAACCCATaGGCTTCTTGGAATGAAAGCAGCCACTCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: EARKAPIPPPNP*ASWNESSHSQK
Trigger: CTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTTTCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCAAGCGTGTGACTTGGTaGCATTCTGTGTGGAATGGA +
Preference number: 3 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGKRVTW*HSVWNG
Trigger: TCCATTCCACACAGAATGCAACCAAGTCACACGCTT...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAAAAGAATTGCTGGGGTaGAGGACCACAGGAAAATTG +
Preference number: 3 (lower is better)
Translates to: SQLTAALNPQTPGILSQPKELLG*RTTGKL
Trigger: CAATTTTCCTGTGGTCCTCAACCCCAGCAATTCTTT...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 72 bp AGGCCTCAAGTGGTCAGAGCTTTCCAAAGGTGGGTGTaGACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: RPQVVRAFQRWV*TVENFLSVERA
Trigger: AGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCTGACCACTTGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 72 bp TGGGCTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTaGTGCCAAGGATGCCACATATTCAGGGGGAAACCA +
Preference number: 3 (lower is better)
Translates to: WASWNESSHSQK*CQGCHIFRGKP
Trigger: TGGTTTCCCCCTGAATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CCA 72 bp CAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAAGGTaGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAG +
Preference number: 3 (lower is better)
Translates to: QIRPQVVRAFQR*VCTVENFLSVE
Trigger: CTCTACAGAGAGGAAATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCACTTCTCAACAGTGCTTaGAGAAGAAGCATGCATTTG +
Preference number: 3 (lower is better)
Translates to: SQLTAALNPQTPGILSQPLLNSA*RRSMHL
Trigger: CAAATGCATGCTTCTTCTCAAAGCACTGTTGAGAAG...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR TCA 72 bp AGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAATaGGGAGGAAACAGCAAAGGAAACGGGATGTGCAGG +
Preference number: 3 (lower is better)
Translates to: STKTCDIEGPGK*GGNSKGNGMCR
Trigger: CCTGCACATCCCGTTTCCTTTGCTGTTTCCTCCTCATTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 72 bp GCTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTaGCAAGGATGCCACATATTCAGGGGGAAACCAGAT +
Preference number: 3 (lower is better)
Translates to: ASWNESSHSQKC*QGCHIFRGKPD
Trigger: ATCTGGTTTCCCCCTGAATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 72 bp ACTCCCCAGAGTCTCCCTGGGGCACCAAACTCTAATTaGCCACTTACCGTAGCTGGCTTAATAGTAAACTTT +
Preference number: 3 (lower is better)
Translates to: TPQSLPGAPNSN*PLTVAGLIVNF
Trigger: AAAGTTTACTATTAAGCCAGCTACGGTAAGTGGGCAATTAGAGTTTGGTGCCCCAGGGAGACTCTGGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR GCA 72 bp TCCTTAACAGTTACCTGCCAGTCCTACTCATGGGCCTaGTCCCAGAAAAATGTACACAGAATTCTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: SLTVTCQSYSWA*SQKNVHRILPG
Trigger: ACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATGAGTAGGACTGGCAGGTAACTGTTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR CCA 72 bp TCCCCATCCTTAACAGTTACCTGCCAGTCCTACTCATaGGCCTGCTCCCAGAAAAATGTACACAGAATTCTG +
Preference number: 3 (lower is better)
Translates to: SPSLTVTCQSYS*ACSQKNVHRIL
Trigger: CAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATGAGTAGGACTGGCAGGTAACTGTTAAGGATGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR-3UTR CAA 90 bp AGTAGGGCTGGGGATTGTCGGGACAGTTTGAGTACAATGCAGTGGAGGGTGACAGTTTCACTGCCTATATaGATCGTGTATTGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: SRAGDCRDSLSTMQWRVTVSLPI*IVYCLC
Trigger: ACAAAGGCAATACACGATCAATATAGGCAGTGAAAC...TGTCACCCTCCACTGCATTGTACTCAAACTGTCCCGACAATCCCCAGCCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp AATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTTTATTTAGCACAGCCTaGGAAACCCCAAGAGAACTG +
Preference number: 3 (lower is better)
Translates to: NQLCFASWAQVPAFHHAALFSTA*ETPREL
Trigger: CAGTTCTCTTGGGGTTTCCAAGGCTGTGCTAAATAA...AGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp AAGACTGAACTTCAGTGGATAATTCCACAGTCTGCTCCTCCAGTTGCTGACGACCCATGCCATAGATCTTaGCACAGCTATAAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: KTELQWIIPQSAPPVADDPCHRS*HSYKFS
Trigger: GGAGAACTTATAGCTGTGCAAAGATCTATGGCATGG...GTCGTCAGCAACTGGAGGAGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR-3UTR CAA 90 bp TGTGATGGCTATTCATTCCAATGTGGGGAAGGGGGATATTTGGAGACTGATCTAGGTTCCTGTCAAACTTaGAGACCCCATTCAACTACT +
Preference number: 3 (lower is better)
Translates to: CDGYSFQCGEGGYLETDLGSCQT*RPHSTT
Trigger: AGTAGTTGAATGGGGTCTCAAAGTTTGACAGGAACC...TAGATCAGTCTCCAAATATCCCCCTTCCCCACATTGGAATGAATAGCCATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR-3UTR CAA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAACATAGAATCAATGGATaGAAATCTCAGTGGGGTCAA +
Preference number: 3 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKHRING*KSQWGQ
Trigger: TTGACCCCACTGAGATTTCAATCCATTGATTCTATG...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 3 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLTQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp AGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAAGTTTTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 3 (lower is better)
Translates to: SLLLQLLTTLQISGYLKFSCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...AAACTTCAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 3 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 3 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR TCA 72 bp ATGAGTGATTACCAGAAGCTGGAAGTTACGCTGCTGTaGGCGACTTTTTATTATCTCAACCAGAGCATGTGC +
Preference number: 3 (lower is better)
Translates to: MSDYQKLEVTLL*ATFYYLNQSMC
Trigger: GCACATGCTCTGGTTGAGATAATAAAAAGTCGCTCACAGCAGCGTAACTTCCAGCTTCTGGTAATCACTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR TCA 72 bp AACGTCCTAAAAGCTCCACAAAATCTTCATCATGAGTaGTTACCAGAAGCTGGAAGTTACGCTGCTGTGAGC +
Preference number: 3 (lower is better)
Translates to: NVLKAPQNLHHE*LPEAGSYAAVS
Trigger: GCTCACAGCAGCGTAACTTCCAGCTTCTGGTAATCACTCATGATGAAGATTTTGTGGAGCTTTTAGGACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR GCA 72 bp AATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATaGCACATATTCAGGGGGAAACCAGATTTAAAATTG +
Preference number: 3 (lower is better)
Translates to: NESSHSQKCCQG*HIFRGKPDLKL
Trigger: CAATTTTAAATCTGGTTTCCCCCTGAATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp GGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 3 (lower is better)
Translates to: GYHKHQTACLRNWTTALPSDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...AGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 3 (lower is better)
Translates to: NFSNVVSKGLTCSLASFISLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
3UTR-3UTR CAA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAATTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 3 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACATTGACATCACGAAATaGCAGACGAATCTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: VSKGLTCSLASFISLYKDIDITK*QTNLGS
Trigger: AGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAAT...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR TCA 72 bp TTGGTCAGCATCTCCATTTGGGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATCTCCTGGTCAAGTTTA +
Preference number: 3 (lower is better)
Translates to: LVSISIWVRVVV*WFNCSISWSSL
Trigger: TAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAATGGAGATGCTGACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR TCA 72 bp TCAGAACGTCCTAAAAGCTCCACAAAATCTTCATCATaGGTGATTACCAGAAGCTGGAAGTTACGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SERPKSSTKSSS*VITRSWKLRCC
Trigger: ACAGCAGCGTAACTTCCAGCTTCTGGTAATCACTCATGATGAAGATTTTGTGGAGCTTTTAGGACGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR CAA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCGCATGGCTCGCTGTTTaGATGATTTTTCAATTTCCT +
Preference number: 3 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCAWLAV*MIFQFP
Trigger: AGGAAATTGAAAAATCATCAAAACAGCGAGCCATGC...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp GGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACGCATGGCTCGCTGTTTaGATGATTTTTCAATTTCCT +
Preference number: 3 (lower is better)
Translates to: GYVLLYDGLTAPSPGQVYAWLAV*MIFQFP
Trigger: AGGAAATTGAAAAATCATCAAAACAGCGAGCCATGC...GTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 3 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTSLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp CTGTGTCTCCCTTCAGCATCACCACTCGGTAGTTATAATTCCGCCTTTTATCAGCTGTGTATCAATATCTaGTCTCATGAGTCTCATATC +
Preference number: 3 (lower is better)
Translates to: LCLPSASPLGSYNSAFYQLCINI*SHESHI
Trigger: GATATGAGACTCATGAGACAAGATATTGATACACAG...CTGATAAAAGGCGGAATTATAACTACCGAGTGGTGATGCTGAAGGGAGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR TCA 72 bp GAATCCCAGGGAGCTAACACTGCATTTCACAATCTCTaGGCACTGATCGATGTTCTTTTTAATCCTGTAGAA +
Preference number: 3 (lower is better)
Translates to: ESQGANTAFHNL*ALIDVLFNPVE
Trigger: TTCTACAGGATTAAAAAGAACATCGATCAGTGCTCAGAGATTGTGAAATGCAGTGTTAGCTCCCTGGGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR CCA 72 bp ATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTaGAATGGAAGGATTCAAGATGTCAGCTGGCAATTC +
Preference number: 3 (lower is better)
Translates to: IIQKRVTWLHSV*NGRIQDVSWQF
Trigger: GAATTGCCAGCTGACATCTTGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTTGCCTTTGTTATTCTTaGCTGCAACAACTAGCACTT +
Preference number: 3 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTCLCYS*LQQLAL
Trigger: AAGTGCTAGTTGTTGCAGCAAAGAATAACAAAGGCA...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTGCATGGCTCGCTGTTTaGATGATTTTTCAATTTCCT +
Preference number: 3 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAAAWLAV*MIFQFP
Trigger: AGGAAATTGAAAAATCATCAAAACAGCGAGCCATGC...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 3 (lower is better)
Translates to: VSKGLTCSLASFISLYKDSDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: MSFFRRCMSLLTFCSLFLQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...AAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 3 (lower is better)
Translates to: NFSNVVSKGLTCSLASFISCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
3UTR-3UTR CAA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTTATTTAGCACAGCCTaGGAAACCCCAAGAGAACTG +
Preference number: 3 (lower is better)
Translates to: NFSNVVSKGLTCSLASFILFSTA*ETPREL
Trigger: CAGTTCTCTTGGGGTTTCCAAGGCTGTGCTAAATAA...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATTGCAAAACTGTGAGTTaGCTAAAGCTAGGAGATGTT +
Preference number: 3 (lower is better)
Translates to: RSTGIRETTCEKAIESMDCKTVS*LKLGDV
Trigger: AACATCTCCTAGCTTTAGCAAACTCACAGTTTTGCA...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATTGCCTTTGTTATTCTTaGCTGCAACAACTAGCACTT +
Preference number: 3 (lower is better)
Translates to: RSTGIRETTCEKAIESMDCLCYS*LQQLAL
Trigger: AAGTGCTAGTTGTTGCAGCAAAGAATAACAAAGGCA...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATGATCGTGTATTGCCTTaGTTATTCTTTGCTGCAACA +
Preference number: 3 (lower is better)
Translates to: RSTGIRETTCEKAIESMDDRVLP*LFFAAT
Trigger: TGTTGCAGCAAAGAATAACAAAGGCAATACACGATC...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR-3UTR CAA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCACTTGTGCTGTTTCTCTaGTTTCTCCTGGTTGACTTG +
Preference number: 3 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSLVLFL*FLLVDL
Trigger: CAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAG...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGAATCTCATCAAACTTTaGCTTCAAAGCCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMNLIKL*LQSLSF
Trigger: GAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGATT...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTTTAAGGTTTCTACATaGCTGTTTTTCTCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVFKVST*LFFSAL
Trigger: CAAGGCTGAGAAAAACAGCAATGTAGAAACCTTAAA...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACTCTCACATCTGTTTCTaGAGCAACCTTGGGATCGTG +
Preference number: 3 (lower is better)
Translates to: WSCISLRFNSILLETVSNSHICF*SNLGIV
Trigger: CACGATCCCAAGGTTGCTCAAGAAACAGATGTGAGA...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR TCA 72 bp TGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGATCTAAGTCTATTCCTT +
Preference number: 3 (lower is better)
Translates to: CLTCAVSLVSPG*LVGQFDLSLFL
Trigger: AAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR GCA 72 bp TGGAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATCTCTCTGTACAAAGAC +
Preference number: 3 (lower is better)
Translates to: WNFSNVVSKGLT*SLASFISLYKD
Trigger: GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
3UTR CCA 72 bp TTGTGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTA +
Preference number: 3 (lower is better)
Translates to: LCCFSCFSWLTC*TVRSKSIPCSL
Trigger: TAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp ATACATTTTCATCGGCATCAGACCGTATTTCTATGTATTCAATATCTTGTCCACCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: IHFHRHQTVFLCIQYLVHQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...GTGGACAAGATATTGAATACATAGAAATACGGTCTGATGCCGATGAAAATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR CAA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: WSCISLRFNSILLETVSNQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 3 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYTQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
3UTR-3UTR CAA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCAAATCTCATCAAACTTTaGCTTCAAAGCCTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSNLIKL*LQSLSF
Trigger: GAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGATT...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR TCA 72 bp AACTGCAACAAGAGTGAAATGAAGACAGCTTTTTCTTaGACACTTACACAGTATTTAGTAGGTGGCAAGCAG +
Preference number: 3 (lower is better)
Translates to: NCNKSEMKTAFS*TLTQYLVGGKQ
Trigger: CTGCTTGCCACCTACTAAATACTGTGTAAGTGTTCAAGAAAAAGCTGTCTTCATTTCACTCTTGTTGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR TCA 72 bp GCAGTTTACAAATGGATAACTCAGTTTAAGAAGGGATaGGACGATATTAAAGATGAAGCCCACAGTGACAGA +
Preference number: 3 (lower is better)
Translates to: AVYKWITQFKKG*DDIKDEAHSDR
Trigger: TCTGTCACTGTGGGCTTCATCTTTAATATCGTCTCATCCCTTCTTAAACTGAGTTATCCATTTGTAAACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
3UTR TCA 72 bp CACTCGGTAGTTATAATTCCGCCTTTTATCAGAAGCTaGTACATTTTCATCGGCATCAGACCGTATTTCTAT +
Preference number: 3 (lower is better)
Translates to: HSVVIIPPFIRS*YIFIGIRPYFY
Trigger: ATAGAAATACGGTCTGATGCCGATGAAAATGTATCAGCTTCTGATAAAAGGCGGAATTATAACTACCGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
3UTR-3UTR CAA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCATCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 3 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSSDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR-3UTR CAA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 3 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGISDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 3 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 3 (lower is better)
Translates to: WSCISLRFNSILLETVSNTQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR-3UTR CAA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACGCTATAAGTTCTCCATaGACATCACGAAATTGCAGA +
Preference number: 3 (lower is better)
Translates to: WSCISLRFNSILLETVSNAISSP*TSRNCR
Trigger: TCTGCAATTTCGTGATGTCAATGGAGAACTTATAGC...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
3UTR TCA 72 bp TTTGAAGATGTTAACTGGGCTTCCTTACTTGTAATCTaGTCACGAATCTCACAAGCTTTTTCCTTATATTGC +
Preference number: 3 (lower is better)
Translates to: FEDVNWASLLVI*SRISQAFSLYC
Trigger: GCAATATAAGGAAAAAGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR TCA 72 bp AGCAAATCAGAAACAGGCAATCTGTCCAATTTTCAGTaGAACAAGTTTCATGATTTTAGAACCTCTCAACAT +
Preference number: 3 (lower is better)
Translates to: SKSETGNLSNFQ*NKFHDFRTSQH
Trigger: ATGTTGAGAGGTTCTAAAATCATGAAACTTGTTTCACTGAAAATTGGACAGATTGCCTGTTTCTGATTTGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR CCA 72 bp GCAAGAACAAGTATCAAATTTATGGTGAAGTGTGGGTaGAAGAATGGTGAAATCATTGATACTTTACAACAA +
Preference number: 3 (lower is better)
Translates to: ARTSIKFMVKCG*KNGEIIDTLQQ
Trigger: TTGTTGTAAAGTATCAATGATTTCACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR GCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCTCCTCCCACACCAGCTaGTTTCCCCGCCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQASSHTS*FPRRWG
Trigger: TCCCCACCGGCGGGGAAAGCAGCTGGTGTGGGAGGA...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCGCACTCACAGCTTCCTaGCTCGGCCGCCCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGALTAS*LGRPAD
Trigger: ATCCGCAGGGCGGCCGAGGCAGGAAGCTGTGAGTGC...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACGGACCAGCCTGGGGCTaGCCGCCGGGGACGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RIDGEASMLHRIDAEECYGPAWG*PPGTQS
Trigger: GCTTTGCGTCCCCGGCGGGCAGCCCCAGGCTGGTCC...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAGGGAGGAGGCAGAGCTaGATTCCAGTAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQLTAALNPQTPGILSQPGRRQS*IPVGLG
Trigger: CCCCAGCCCTACTGGAATCCAGCTCTGCCTCCTCCC...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGGGCGTGCACGGGACGTaGGACCCGCGAATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLGVHGT*DPRISG
Trigger: CCCTGAGATTCGCGGGTCTCACGTCCCGTGCACGCC...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAAGCTCACTGCAGCCTTaGACCCTCAGACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SQLTAALNPQTPGILSQPSSLQP*TLRLQG
Trigger: TCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCT...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCACATATGGCCGAAGCAAGGCGTaGACGGGACGTGAGACCCGC +
Preference number: 4 (lower is better)
Translates to: LLGMKAATLRSAAKDATYGRSKA*TGRETR
Trigger: GCGGGTCTCACGTCCCGTGCACGCCTTGCTTCGGCC...ATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp GATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTGACAGGGTCTCACTCTaGCACCCACCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DGEASMLHRIDAEECYRLDRVSL*HPPRLG
Trigger: CCCCAGCCTGGGTGGGTGGCAGAGTGAGACCCTGTC...AAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCACCCACCCAGGCTaGGGTGCAGTGGCACAAATC +
Preference number: 4 (lower is better)
Translates to: TQDRRRGVLQASSRWADQATHPG*GAVAQI
Trigger: GATTTGTGCCACTGCACCCCAGCCTGGGTGGGTGGC...CTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CAA 72 bp CAGGGAGCAGGCCTTGACTCTGTGAGTGAGCCTGGCTaGCCTTCCACATGGCAATGCCCACTTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QGAGLDSVSEPG*PSTWQCPLREE
Trigger: TTCCTCTCTAAGTGGGCATTGCCATGTGGAAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTGCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp AAGACTGAACTTCAGTGGATAATTCCACAGTCTGCTCCTCCAGTTGCTGACGACGCACTCACAGCTTCCTaGCTCGGCCGCCCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: KTELQWIIPQSAPPVADDALTAS*LGRPAD
Trigger: ATCCGCAGGGCGGCCGAGGCAGGAAGCTGTGAGTGC...GTCGTCAGCAACTGGAGGAGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTTCCTCCCACACCAGCTaGTTTCCCCGCCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NQLCFASWAQVPAFHHAASSHTS*FPRRWG
Trigger: TCCCCACCGGCGGGGAAAGCAGCTGGTGTGGGAGGA...AGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CTGTGTCTCCCTTCAGCATCACCACTCGGTAGTTATAATTCCGCCTTTTATCAGCTGCCTCGGCCGCCCTaGGGATCACGTGGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LCLPSASPLGSYNSAFYQLPRPP*GSRGPL
Trigger: TAGAGGCCCACGTGATCCGCAGGGCGGCCGAGGCAG...CTGATAAAAGGCGGAATTATAACTACCGAGTGGTGATGCTGAAGGGAGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR GCA 90 bp GAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGCGAGGCCACAGGACTaGCAAAAGATCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EASMLHRIDAEECYRLLHARPQD*QKILPA
Trigger: GGCTGGCAGGATCTTTTGGCAGTCCTGTGGCCTCGC...GTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCCAGGCTTCTTCACGATaGGCAGATCAGGCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQAQASSR*ADQASS
Trigger: ACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTG...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CCA 90 bp CACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCAGGCTGGGGTGCAGTaGCACAAATCACAGCTCACT +
Preference number: 4 (lower is better)
Translates to: HRIDAEECYRLLHDGQIRQAGVQ*HKSQLT
Trigger: AGTGAGCTGTGATTTGTGCCACTGCACCCCAGCCTG...CCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACGCCACCCACCCAGGCTaGGGTGCAGTGGCACAAATC +
Preference number: 4 (lower is better)
Translates to: RIDGEASMLHRIDAEECYATHPG*GAVAQI
Trigger: GATTTGTGCCACTGCACCCCAGCCTGGGTGGGTGGC...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCGGCGTGCACGGGACGTaGGACCCGCGAATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSGVHGT*DPRISG
Trigger: CCCTGAGATTCGCGGGTCTCACGTCCCGTGCACGCC...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCGGCGTGCACGGGACGTaGGACCCGCGAATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPGVHGT*DPRISG
Trigger: CCCTGAGATTCGCGGGTCTCACGTCCCGTGCACGCC...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAAGGTACAGGCCTTGACTCTGTaGGTGAGCCTGGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TEYLLTGGNKKGLREAKVQALTL*VSLACL
Trigger: AAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTG...TACCTTGGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCATGGTGTGCTAGGATTTaGGCCCAGGCAGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YATQDRRRGVLQASSRWAWCARI*AQAVWL
Trigger: GAGCCAGACTGCCTGGGCTCAAATCCTAGCACACCA...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGGAGGGGCCAGGGAAATaGGGAGGAAACAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQEGPGK*GGNSKG
Trigger: TCCTTTGCTGTTTCCTCCTCATTTCCCTGGCCCCTC...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCGTGGGAACTGAACTCTaGGTGAGCGGCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRVGTEL*VSGDSS
Trigger: GGAGCTGTCGCCGCTCACTCAGAGTTCAGTTCCCAC...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR GCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCATATGATCCTAGGAACTaGCAGTGTGCTCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SQLTAALNPQTPGILSQPYDPRN*QCAPAN
Trigger: GTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATA...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp TGTGATGGCTATTCATTCCAATGTGGGGAAGGGGGATATTTGGAGACTGATCTAAGAGGGGGCGGGGGATaGAGCCTTTCCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: CDGYSFQCGEGGYLETDLRGGGG*SLSSHT
Trigger: GGTGTGGGAGGAAAGGCTCCATCCCCCGCCCCCTCT...TAGATCAGTCTCCAAATATCCCCCTTCCCCACATTGGAATGAATAGCCATCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000378823.8
3UTR CAA 72 bp TTTGTTGTTGGCTCATCCAAGGCAATGATGCCACAGTaGAGGCAGAACGTTTCAGCCAGGGCCAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: FVVGSSKAMMPQ*RQNVSARARRM
Trigger: CATTCGCCTGGCCCTGGCTGAAACGTTCTGCCTCAACTGTGGCATCATTGCCTTGGATGAGCCAACAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACTGTACTGCTGAACCCTaGAGGCCTGACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RIDGEASMLHRIDAEECYCTAEP*RPDRGC
Trigger: GCAGCCTCTGTCAGGCCTTCAGGGTTCAGCAGTACA...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCCAATGCAGTGGAGGGTaGCATAATGATGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGQCSGG*HNDEPW
Trigger: CCATGGCTCATCATTATGTCACCCTCCACTGCATTG...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCGAGGGGCCAGGGAAATaGGGAGGAAACAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HRTEYLLTGGNKKGLREAEGPGK*GGNSKG
Trigger: TCCTTTGCTGTTTCCTCCTCATTTCCCTGGCCCCTC...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CCCAAGAGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTAGCACTCACAGCTTCCTaGCTCGGCCGCCCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: PKSVSCSSMSFFRRCMSLALTAS*LGRPAD
Trigger: ATCCGCAGGGCGGCCGAGGCAGGAAGCTGTGAGTGC...TAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACTCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGGCCGAAGCAAGGCGTaGACGGGACGTGAGACCCGC +
Preference number: 4 (lower is better)
Translates to: GILWHFLLQALLYPRVFLGRSKA*TGRETR
Trigger: GCGGGTCTCACGTCCCGTGCACGCCTTGCTTCGGCC...AAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTTACCGGCCGAAGCAAGGCGTaGACGGGACGTGAGACCCGC +
Preference number: 4 (lower is better)
Translates to: KPLGSITRFLNSPSLTVTGRSKA*TGRETR
Trigger: GCGGGTCTCACGTCCCGTGCACGCCTTGCTTCGGCC...GGTAACTGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp ACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAAGCCTTCCACATGGCAATaGCCACTTAGAGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: TAHCSLEPSDSRDPISAKPSTWQ*PLREES
Trigger: TGATTCCTCTCTAAGTGGGCATTGCCATGTGGAAGG...CTTGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTAGAGGGGGCGGGGGATaGAGCCTTTCCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSRGGGG*SLSSHT
Trigger: GGTGTGGGAGGAAAGGCTCCATCCCCCGCCCCCTCT...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCAGAGCTTTCCAAAGGTaGGTGTGCACAGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQARAFQR*VCTVEN
Trigger: ATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCT...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGCAGGCTTCTTCACGATaGGCAGATCAGGCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQQASSR*ADQASS
Trigger: ACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTG...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CCA 90 bp ACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAAGAATCAAGACCCGGTATaGTCCTGGCTGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TAHCSLEPSDSRDPISAKNQDPV*SWLTLN
Trigger: ATTCAGAGTCAGCCAGGACCATACCGGGTCTTGATT...CTTGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACAGCCCTGCGGATCACGTaGGCCTCTAGGCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTALRIT*ASRPAR
Trigger: GCGTGCGGGCCTAGAGGCCCACGTGATCCGCAGGGC...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGGGCGTGCACGGGACGTaGGACCCGCGAATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLGVHGT*DPRISG
Trigger: CCCTGAGATTCGCGGGTCTCACGTCCCGTGCACGCC...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCACTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: SQLTAALNPQTPGILSQPLVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGTGCTCCTCCAGTTGCTaGCGACGTTGCAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQCSSSC*RRCKLV
Trigger: CACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCA...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp GGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGCACTCACAGCTTCCTaGCTCGGCCGCCCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: GILWHFLLQALLYPRVFLALTAS*LGRPAD
Trigger: ATCCGCAGGGCGGCCGAGGCAGGAAGCTGTGAGTGC...AAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACTCCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG +
Preference number: 4 (lower is better)
Translates to: RIDGEASMLHRIDAEECYSARPE*SSFRSG
Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGA...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp AGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGAGAAGAAGCATGCATTTaGACTGGGGAGGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: SQYATQDRRRGVLQASSREEACI*TGEGGT
Trigger: TGTGCCTCCCTCCCCAGTGCAAATGCATGCTTCTTC...TCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGCTGAGGCAGGAGGATTaGTTGTATCAGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLLRQED*LYQGGR
Trigger: TCTGCCTCCCTGATACAAGCAATCCTCCTGCCTCAG...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TQDRRRGVLQASSRWADQNCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...CTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCATGTCAGCTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: SQLTAALNPQTPGILSQPCQLCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAAAGAGGCTGCCTGGAATaGGATGAAGAGCAGCAAATC +
Preference number: 4 (lower is better)
Translates to: TGFFTMGRSGLKWSELSKRGCLE*DEEQQI
Trigger: GATTTGCTGCTCTTCATCCCATTCCAGGCAGCCTCT...TTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp GCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGCTTGCCTTCCACATaGCAATGCCCACTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: ASMLHRIDAEECYRLLHDGLPST*QCPLRE
Trigger: CTCTCTAAGTGGGCATTGCCATGTGGAAGGCAAGCC...ATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp CTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCACATATCTGTTCTTCCAGGTCTaGTTGGACCCTACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLGMKAATLRSAAKDATYLFFQV*LDPTGS
Trigger: GCTCCCTGTAGGGTCCAACCAGACCTGGAAGAACAG...ATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACCTGTTCTTCCAGGTCTaGTTGGACCCTACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RIDGEASMLHRIDAEECYLFFQV*LDPTGS
Trigger: GCTCCCTGTAGGGTCCAACCAGACCTGGAAGAACAG...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGTAGGGCTGGGGATTGTCGGGACAGTTTGAGTACAATGCAGTGGAGGGTGACACATCTGAAGAGCAAATaGAGAGGCCTGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SRAGDCRDSLSTMQWRVTHLKSK*RGLFFQ
Trigger: CTGGAAGAACAGGCCTCTCCATTTGCTCTTCAGATG...TGTCACCCTCCACTGCATTGTACTCAAACTGTCCCGACAATCCCCAGCCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQAVRVVV*WFNCSI
Trigger: GATGGAGCAGTTAAACCATCATACAACAACACGTAC...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGAGCTCTGAGTCTGGATaGCCATCTGGAAGGGATATG +
Preference number: 4 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLSSESG*PSGRDM
Trigger: CATATCCCTTCCAGATGGTCATCCAGACTCAGAGCT...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp GCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATACCATGCCATGTGACTaGATCAAGACCCGGTATGGT +
Preference number: 4 (lower is better)
Translates to: ASMLHRIDAEECYRLLHDTMPCD*IKTRYG
Trigger: ACCATACCGGGTCTTGATTCAGTCACATGGCATGGT...ATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCCGGCCGAAGCAAGGCGTaGACGGGACGTGAGACCCGC +
Preference number: 4 (lower is better)
Translates to: RCMSLLTFCSLFLNSGISGRSKA*TGRETR
Trigger: GCGGGTCTCACGTCCCGTGCACGCCTTGCTTCGGCC...GGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTGGCCGAAGCAAGGCGTaGACGGGACGTGAGACCCGC +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTGRSKA*TGRETR
Trigger: GCGGGTCTCACGTCCCGTGCACGCCTTGCTTCGGCC...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCCTTTTGTCCAGCACTaGATCGTCCTCGCATATCCA +
Preference number: 4 (lower is better)
Translates to: DGEASMLHRIDAEECYRLPFVQH*IVLAYP
Trigger: TGGATATGCGAGGACGATGCAGTGCTGGACAAAAGG...AAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR GCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCAGCTGGAAGTTACGCTaGTGTGAGCGACTTTTTATT +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQASWKLR*CERLFI
Trigger: AATAAAAAGTCGCTCACAGCAGCGTAACTTCCAGCT...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAGCCACTCTCAGAAGTaGTGCCAAGGATGCCACATA +
Preference number: 4 (lower is better)
Translates to: HRTEYLLTGGNKKGLREASHSQK*CQGCHI
Trigger: TATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCT...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAAGCCACTCTCAGAAGTaGTGCCAAGGATGCCACATA +
Preference number: 4 (lower is better)
Translates to: YATQDRRRGVLQASSRWASHSQK*CQGCHI
Trigger: TATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCT...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGAAAGGAAACGGGATGTaGAGGTGTTGCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IDGEASMLHRIDAEECYRKGNGM*RCCREE
Trigger: CTCCTCCCTGCAACACCTGCACATCCCGTTTCCTTT...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACAAGAGGGGGCGGGGGATaGAGCCTTTCCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTRGGGG*SLSSHT
Trigger: GGTGTGGGAGGAAAGGCTCCATCCCCCGCCCCCTCT...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTTGGCTCCAGCCAGCATaGCTCGCTGTTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFWLQPA*LAVLMI
Trigger: AATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCA...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGAGATCAGGCCTCAAGTaGTCAGAGCTTTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQRSGLK*SELSKG
Trigger: ACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCT...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CCA 90 bp ACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAAGCAAAAGCGTGTGACTTaGTTGCATTCTGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: TAHCSLEPSDSRDPISAKQKRVT*LHSVWN
Trigger: ATTCCACACAGAATGCAACCAAGTCACACGCTTTTG...CTTGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCTCACATCTGTTTCTTaGGCAACCTTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: GEASMLHRIDAEECYRLLLTSVS*ATLGSC
Trigger: ACACGATCCCAAGGTTGCTCAAGAAACAGATGTGAG...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCCCTTTTATCAGAAGCTaGTACATTTTCATCGGCATC +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQAPFIRS*YIFIGI
Trigger: GATGCCGATGAAAATGTATCAGCTTCTGATAAAAGG...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR TCA 90 bp AGTAGGGCTGGGGATTGTCGGGACAGTTTGAGTACAATGCAGTGGAGGGTGACAGTTCCTGTCAAACTTTaGGACCCCATTCAACTACTT +
Preference number: 4 (lower is better)
Translates to: SRAGDCRDSLSTMQWRVTVPVKL*DPIQLL
Trigger: AAGTAGTTGAATGGGGTCTCAAAGTTTGACAGGAAC...TGTCACCCTCCACTGCATTGTACTCAAACTGTCCCGACAATCCCCAGCCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp AGAGGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGCTTAGAAGTGGCATCTaGAGAGCAAATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RGIRIDGEASMLHRIDAELRSGI*RANGEA
Trigger: GGCCTCTCCATTTGCTCTTCAGATGCCACTTCTAAG...CTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACACCATGCCATGTGACTaGATCAAGACCCGGTATGGT +
Preference number: 4 (lower is better)
Translates to: RIDGEASMLHRIDAEECYTMPCD*IKTRYG
Trigger: ACCATACCGGGTCTTGATTCAGTCACATGGCATGGT...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCCAAAACCATGCCATGTaGCTGAATCAAGACCCGGTA +
Preference number: 4 (lower is better)
Translates to: HRTEYLLTGGNKKGLREAQNHAM*LNQDPV
Trigger: TACCGGGTCTTGATTCAGTCACATGGCATGGTTTTG...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCTCTTCTGGACCCAGTTaGGAAAAGCTGTCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: HRTEYLLTGGNKKGLREASSGPS*EKLSRQ
Trigger: TTGCCTAGACAGCTTTTCTCAACTGGGTCCAGAAGA...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATGGGATATTTGGAGACTaGTCTAGAAGCAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: ATQDRRRGVLQASSRWADGIFGD*SRSSNE
Trigger: CTCATTGCTGCTTCTAGATCAGTCTCCAAATATCCC...ATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCCCTCCATCCATGCTGTaGTGGCTATTCATTCCAATG +
Preference number: 4 (lower is better)
Translates to: HRTEYLLTGGNKKGLREAPPSML*WLFIPM
Trigger: CATTGGAATGAATAGCCATCACAGCATGGATGGAGG...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAACAATGCAGTGGAGGGTaGCATAATGATGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKQCSGG*HNDEPW
Trigger: CCATGGCTCATCATTATGTCACCCTCCACTGCATTG...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGCAGCAATGAGAAGCCAGAAAGGCACCTATCCCACCTCCAAACCCATGGGCTTAGCTATGAGACTGGATaGGATCACCAAATAAGTGAG +
Preference number: 4 (lower is better)
Translates to: SSNEKPERHLSHLQTHGLSYETG*DHQISE
Trigger: CTCACTTATTTGGTGATCTCATCCAGTCTCATAGCT...AAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTTTCTGGCTTCTCATTGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCGCATCCAGTGGGAACTaGACTCTGAGTGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSASSGN*TLSERR
Trigger: TCGCCGCTCACTCAGAGTTCAGTTCCCACTGGATGC...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR GCA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCATCCTCCCACACCAGCTaGTTTCCCCGCCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSSSHTS*FPRRWG
Trigger: TCCCCACCGGCGGGGAAAGCAGCTGGTGTGGGAGGA...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR GCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTTCCTCCCACACCAGCTaGTTTCCCCGCCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTSSHTS*FPRRWG
Trigger: TCCCCACCGGCGGGGAAAGCAGCTGGTGTGGGAGGA...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CTCCATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATGCGAGGCCACAGGACTaGCAAAAGATCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LHNCNICQAYFGTFFFRHARPQD*QKILPA
Trigger: GGCTGGCAGGATCTTTTGGCAGTCCTGTGGCCTCGC...ATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCACCACCCAGGCTGGGGTaGAGTGGCACAAATCACAGC +
Preference number: 4 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSPPRLG*SGTNHS
Trigger: GCTGTGATTTGTGCCACTGCACCCCAGCCTGGGTGG...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATCCACCCAGGCTGGGGTaGAGTGGCACAAATCACAGC +
Preference number: 4 (lower is better)
Translates to: RSTGIRETTCEKAIESMDPPRLG*SGTNHS
Trigger: GCTGTGATTTGTGCCACTGCACCCCAGCCTGGGTGG...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp GCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGAGTGGTCAGTGCCCTaGCTATATCCTATGATCCTA +
Preference number: 4 (lower is better)
Translates to: ASMLHRIDAEECYRLLHDEWSVP*LYPMIL
Trigger: TAGGATCATAGGATATAGGCAGGGCACTGACCACTC...ATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp ACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTTCTAAGGTCGCTGTAGCCTaGAGGCCACACCCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: TTNIKQLVFVTGQLLFLSKVAVA*RPHPKA
Trigger: TGCCTTAGGGTGTGGCCTGCAGGCTACAGCGACCTT...AGAAAGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR CCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAGGGGGCGGGGGATaGAGCCTTTCCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTRGGGG*SLSSHT
Trigger: GGTGTGGGAGGAAAGGCTCCATCCCCCGCCCCCTCT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGGCTTTTATGAGCTCCTaGTCCAGTTCAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQAFMSS*SSSRIL
Trigger: CAGGATTCTTGAACTGGACCAGGAGCTCATAAAAGC...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp CAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGAGAGCTTTCCAAAGGTaGGTGTGCACAGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QYATQDRRRGVLQASSRWRAFQR*VCTVEN
Trigger: ATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCT...CCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CCA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAGATCAGGCCTCAAGTaGTCAGAGCTTTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: HRTEYLLTGGNKKGLREARSGLK*SELSKG
Trigger: ACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCT...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAAGATCAGGCCTCAAGTaGTCAGAGCTTTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: YATQDRRRGVLQASSRWARSGLK*SELSKG
Trigger: ACCTTTGGAAAGCTCTGACCACTTGAGGCCTGATCT...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CCA 90 bp GAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACCATCTGAAGAGCAAATaGAGAGGCCTGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EASMLHRIDAEECYRLLHHLKSK*RGLFFQ
Trigger: CTGGAAGAACAGGCCTCTCCATTTGCTCTTCAGATG...GTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAAGACCCGGTATGGTCCTaGCTGACTCTGAATGACAAA +
Preference number: 4 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKDPVWS*LTLNDK
Trigger: TTTGTCATTCAGAGTCAGCCAGGACCATACCGGGTC...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCACACCATGGGGTTATTaGAGAGTGAGATGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQATPWGY*RVRCLK
Trigger: TTTTAAGCATCTCACTCTCCAATAACCCCATGGTGT...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTGGCTCCAGCCAGCATaGCTAAAGTCACACAGTGAG +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFWLQPA*LKSHSE
Trigger: CTCACTGTGTGACTTTAGCCATGCTGGCTGGAGCCA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGCTCACATCTGTTTCTTaGGCAACCTTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLLTSVS*ATLGSC
Trigger: ACACGATCCCAAGGTTGCTCAAGAAACAGATGTGAG...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGTCTTTCACTGAATGGTCCACGCTCAAAGCCATCCAATTCTAGCTGTGTTGCCCACGTTCAGCTTTTATaGGCTCCTGGTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: CLSLNGPRSKPSNSSCVAHVQLL*APGPVQ
Trigger: TTGAACTGGACCAGGAGCTCATAAAAGCTGAACGTG...GGCAACACAGCTAGAATTGGATGGCTTTGAGCGTGGACCATTCAGTGAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGGCATTTCACAATCTCTaGGCACTGATCGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQAFHNL*ALIDVL
Trigger: AAGAACATCGATCAGTGCTCAGAGATTGTGAAATGC...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCTGGCTGACTCTGAATaGCAAAACTCTACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: ATQDRRRGVLQASSRWADLADSE*QNSTKH
Trigger: ATGCTTTGTAGAGTTTTGTCATTCAGAGTCAGCCAG...ATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCAAAACCATGCCATGTaGCTGAATCAAGACCCGGTA +
Preference number: 4 (lower is better)
Translates to: IDGEASMLHRIDAEECYRQNHAM*LNQDPV
Trigger: TACCGGGTCTTGATTCAGTCACATGGCATGGTTTTG...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGGGGATATTTGGAGACTaGTCTAGAAGCAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: SMLHRIDAEECYRLLHDGGIFGD*SRSSNE
Trigger: CTCATTGCTGCTTCTAGATCAGTCTCCAAATATCCC...CCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAAAGAATTGCTGGGGTTaGGGACCACAGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: YATQDRRRGVLQASSRWAKNCWG*GPQENC
Trigger: ACAATTTTCCTGTGGTCCTCAACCCCAGCAATTCTT...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAAAGCTATGAGACTGGATaGGATCACCAAATAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGFFTMGRSGLKWSELSKSYETG*DHQISE
Trigger: CTCACTTATTTGGTGATCTCATCCAGTCTCATAGCT...TTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTCCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAASARPE*SSFRSG
Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGA...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTCCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG +
Preference number: 4 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVSARPE*SSFRSG
Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGA...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp CAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGTTGACATCACGAAATTaGAGACGAATCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QYATQDRRRGVLQASSRWLTSRN*RRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAA...CCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp CATGGGCCTGCTCCCAGAAAAATGTACACAGAATTCTGCCTGGTTTCTGGGGGTTTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: HGPAPRKMYTEFCLVSGGFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...ACCCCCAGAAACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR GCA 90 bp AGTAGGGCTGGGGATTGTCGGGACAGTTTGAGTACAATGCAGTGGAGGGTGACATGTTTTTCTCAGCCTTaGTTAACTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SRAGDCRDSLSTMQWRVTCFSQP*LTHVQL
Trigger: AAGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACA...TGTCACCCTCCACTGCATTGTACTCAAACTGTCCCGACAATCCCCAGCCCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGTCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQSKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCTGAGGTATATATTTTaGCAAACTCCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ATQDRRRGVLQASSRWADLRYIF*QTPQSL
Trigger: GAGACTCTGGGGAGTTTGGCAAAATATATACCTCAG...ATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp GCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATATACTCCAGGTCTCTTaGCCCTTAGGTGGGATAATT +
Preference number: 4 (lower is better)
Translates to: ASMLHRIDAEECYRLLHDILQVS*PLGGII
Trigger: AATTATCCCACCTAAGGGGCAAGAGACCTGGAGTAT...ATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCTTCAACCAGAGCATGTaGAAGAGATTCAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: QDRRRGVLQASSRWADQAFNQSM*KRFNVF
Trigger: GAAAACATTGAATCTCTTGCACATGCTCTGGTTGAA...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455677.1
CDS-3UTR CCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTGTCTTTCACTGAATaGTCCACGCTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPLSFTE*STLKAI
Trigger: GATGGCTTTGAGCGTGGACCATTCAGTGAAAGACAG...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp CTGGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LATTNIKQLVFVTGQLLFNCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...GAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp GAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGTTCCTTGTTCAATTTaGCAAGTCTGTCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: EASMLHRIDAEECYRLLHVPCSI*QVCPWS
Trigger: AGACCAGGGACAGACTTGCCAAATTGAACAAGGAAC...GTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTGGCTCCAGCCAGCATaGCTCGCTGTTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFWLQPA*LAVLMI
Trigger: AATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp ACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAATCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: TGFFTMGRSGLKWSELSKSWLTC*TVRSKS
Trigger: AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGA...TTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp AGTAGGGCTGGGGATTGTCGGGACAGTTTGAGTACAATGCAGTGGAGGGTGACAAAGACTGAACTTCAGTaGATAATTCCACAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SRAGDCRDSLSTMQWRVTKTELQ*IIPQSA
Trigger: AGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT...TGTCACCCTCCACTGCATTGTACTCAAACTGTCCCGACAATCCCCAGCCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCAGCATCCCGAAATTGTaGTTCTCGAAGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGSIPKL*FSKFFL
Trigger: AAGAAAGAACTTCGAGAACCACAATTTCGGGATGCT...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGAGGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGAGAGCTTTCCAAAGGTaGGTGTGCACAGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: RGIRIDGEASMLHRIDAERAFQR*VCTVEN
Trigger: ATTCTCCACTGTGCACACCCACCTTTGGAAAGCTCT...CTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CCA 90 bp TGTGATGGCTATTCATTCCAATGTGGGGAAGGGGGATATTTGGAGACTGATCTACAGGCTTCTTCACGATaGGCAGATCAGGCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: CDGYSFQCGEGGYLETDLQASSR*ADQASS
Trigger: ACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTG...TAGATCAGTCTCCAAATATCCCCCTTCCCCACATTGGAATGAATAGCCATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp ATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTAACCCATGGGCTTCTTaGAATGAAAGCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: IRIDGEASMLHRIDAEECNPWAS*NESSHS
Trigger: AGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTT...ACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGGGATTGAAATCTCAGTaGGGTCAAAGAATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLGLKSQ*GQRIAG
Trigger: CCCAGCAATTCTTTGACCCCACTGAGATTTCAATCC...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp AGTAGGGCTGGGGATTGTCGGGACAGTTTGAGTACAATGCAGTGGAGGGTGACAGTCTTTTTGCTTTTCTaGGTACACACCATAGATCTT +
Preference number: 4 (lower is better)
Translates to: SRAGDCRDSLSTMQWRVTVFLLF*VHTIDL
Trigger: AAGATCTATGGTGTGTACTCAGAAAAGCAAAAAGAC...TGTCACCCTCCACTGCATTGTACTCAAACTGTCCCGACAATCCCCAGCCCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATAAACCCCAAGAGAACTaGTCATTTCTCGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: ATQDRRRGVLQASSRWADKPQEN*SFLGQF
Trigger: AAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTT...ATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCGCTCGGATATGTTCTTaGTGGCGATCTGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSARICS*WRSACS
Trigger: GCTGCAAGCAGATCGCCATCAAGAACATATCCGAGC...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTGAAGTTACGCTGCTGTaGGCGACTTTTTATTATCTC +
Preference number: 4 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFEVTLL*ATFYYL
Trigger: GAGATAATAAAAAGTCGCTCACAGCAGCGTAACTTC...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATAATCTTCATCATGAGTaGTTACCAGAAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ATQDRRRGVLQASSRWADNLHHE*LPEAGS
Trigger: ACTTCCAGCTTCTGGTAATCACTCATGATGAAGATT...ATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGCATTTCACAATCTCTaGGCACTGATCGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: YATQDRRRGVLQASSRWAAFHNL*ALIDVL
Trigger: AAGAACATCGATCAGTGCTCAGAGATTGTGAAATGC...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCTGGCTGACTCTGAATaGCAAAACTCTACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SMLHRIDAEECYRLLHDGLADSE*QNSTKH
Trigger: ATGCTTTGTAGAGTTTTGTCATTCAGAGTCAGCCAG...CCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGTTTCACTGCCTATATTaGTCGTGTATTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: HRIDAEECYRLLHDGQIRFHCLY*SCIAFV
Trigger: AACAAAGGCAATACACGATCAATATAGGCAGTGAAA...CCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCCAGGGAAACAACCTGTaGAAAAGCCATAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: LHRIDAEECYRLLHDGQIQGNNL*KSHRIN
Trigger: ATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTG...GATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATCCCCAATTTCCTACTaGTTACTTTCACGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SQYATQDRRRGVLQASSRSPISY*LLSREA
Trigger: TGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGGA...TCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTGAACTGAACTCTGAGTaGGCGGCGACAGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: CWSCISLRFNSILLETVSELNSE*AATAPG
Trigger: ACCGGGAGCTGTCGCCGCTCACTCAGAGTTCAGTTC...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR TCA 90 bp AGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGAAGCTCTGAGTCTGGATaGCCATATTTCTATGGCATT +
Preference number: 4 (lower is better)
Translates to: SQYATQDRRRGVLQASSRSSESG*PYFYGI
Trigger: AATGCCATAGAAATATGGTCATCCAGACTCAGAGCT...TCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651249.1
CDS-3UTR GCA 90 bp CTCCATTTGCTTCTTTCGGCTATCCAAGGCTTTAATTTCATTGTCAAGTTTCATGCGAGGCCACAGGACTaGCAAAAGATCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LHLLLSAIQGFNFIVKFHARPQD*QKILPA
Trigger: GGCTGGCAGGATCTTTTGGCAGTCCTGTGGCCTCGC...ATGAAACTTGACAATGAAATTAAAGCCTTGGATAGCCGAAAGAAGCAAATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTCCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSSARPE*SSFRSG
Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGA...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGCACACCATAGATCTTTaGACAGCTATAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQHTIDL*TAISSP
Trigger: TGGAGAACTTATAGCTGTGCAAAGATCTATGGTGTG...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp AGCAGCAATGAGAAGCCAGAAAGGCACCTATCCCACCTCCAAACCCATGGGCTTCTGACCTTTTCACCATaGTTTGTTCTAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: SSNEKPERHLSHLQTHGLLTFSP*FVLVMT
Trigger: AGTCATTACTAGAACAAAGCATGGTGAAAAGGTCAG...AAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTTTCTGGCTTCTCATTGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCGAAGATCCTTCCAACTaGTGTAATTCATACTTCACA +
Preference number: 4 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGEDPSN*CNSYFT
Trigger: TGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTC...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp AGTAATGAACTGGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTAGTCGCAGTTTAGACTaGAAATCACTGATGACTTCT +
Preference number: 4 (lower is better)
Translates to: SNELGVNCCGSSQHGSLFSRSLD*KSLMTS
Trigger: AGAAGTCATCAGTGATTTGCAGTCTAAACTGCGACT...AAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCCAGTTCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp GAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: EASMLHRIDAEECYRLLHKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...GTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp ACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTAGAGCTCAGACCTTTTGTCCAGCACTaGATCGTCCTCGCATATCCA +
Preference number: 4 (lower is better)
Translates to: TPRELIISRSISAHLELRPFVQH*IVLAYP
Trigger: TGGATATGCGAGGACGATGCAGTGCTGGACAAAAGG...TCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR GCA 90 bp GGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGAGCTGGAAGTTACGCTaGTGTGAGCGACTTTTTATT +
Preference number: 4 (lower is better)
Translates to: GIRIDGEASMLHRIDAEESWKLR*CERLFI
Trigger: AATAAAAAGTCGCTCACAGCAGCGTAACTTCCAGCT...CTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTCTGAGGCAGGAGGATTaGTTGTATCAGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTLRQED*LYQGGR
Trigger: TCTGCCTCCCTGATACAAGCAATCCTCCTGCCTCAG...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCACATATATACTCCAGGTCTCTTaGCCCTTAGGTGGGATAATT +
Preference number: 4 (lower is better)
Translates to: LLGMKAATLRSAAKDATYILQVS*PLGGII
Trigger: AATTATCCCACCTAAGGGGCAAGAGACCTGGAGTAT...ATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCATCTCACCAGGGACCTaGAGCCCACAAAGGCTTAAC +
Preference number: 4 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFISPGT*SPQRLN
Trigger: GTTAAGCCTTTGTGGGCTCCAGGTCCCTGGTGAGAT...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGAATTGCAGACGAATCTaGGCTCTCACATCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLNCRRI*ALTSVS
Trigger: AGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATT...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCGCTTTTATGAGCTCCTaGTCCAGTTCAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRAFMSS*SSSRIL
Trigger: CAGGATTCTTGAACTGGACCAGGAGCTCATAAAAGC...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTGCTTTTATGAGCTCCTaGTCCAGTTCAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: NQLCFASWAQVPAFHHAAAFMSS*SSSRIL
Trigger: CAGGATTCTTGAACTGGACCAGGAGCTCATAAAAGC...AGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGTGTCAGCTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPCQLCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATTCAAGATGTCAGCTaGCAATTCCAGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQIQDVS*QFQEKL
Trigger: CAGTTTTTCCTGGAATTGCCAGCTGACATCTTGAAT...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp GCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATCAAAAGCGTGTGACTTaGTTGCATTCTGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ASMLHRIDAEECYRLLHDQKRVT*LHSVWN
Trigger: ATTCCACACAGAATGCAACCAAGTCACACGCTTTTG...ATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTATACAAAAATTAGCCTaGTGTGGTGGTACATGCCTG +
Preference number: 4 (lower is better)
Translates to: GEASMLHRIDAEECYRLLIQKLA*CGGTCL
Trigger: CAGGCATGTACCACCACACCAGGCTAATTTTTGTAT...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGACACCATGGGGTTATTaGAGAGTGAGATGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQTPWGY*RVRCLK
Trigger: TTTTAAGCATCTCACTCTCCAATAACCCCATGGTGT...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCAGGGAGGAGGCAGAGCTaGATTCCAGTAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAAGRRQS*IPVGLG
Trigger: CCCCAGCCCTACTGGAATCCAGCTCTGCCTCCTCCC...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCACAGGCTGGGGTGCAGTaGCACAAATCACAGCTCACT +
Preference number: 4 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSQAGVQ*HKSQLT
Trigger: AGTGAGCTGTGATTTGTGCCACTGCACCCCAGCCTG...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGGCTCCAGCCAGCATaGCTAAAGTCACACAGTGAG +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAAWLQPA*LKSHSE
Trigger: CTCACTGTGTGACTTTAGCCATGCTGGCTGGAGCCA...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
3UTR CAA 72 bp GATGGCTATTCATTCCAATGTGGGGAAGGGGGATATTaGGAGACTGATCTAGAAGCAGCAATGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DGYSFQCGEGGY*ETDLEAAMRSQ
Trigger: CTGGCTTCTCATTGCTGCTTCTAGATCAGTCTCCAAATATCCCCCTTCCCCACATTGGAATGAATAGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ACATCTGCAAAGTTTCCTTTGCTGTATAAAGTAACAGTCACGGGTTCTAGAAATCCACAAAGGCTTAACTaGGGCCGAAGCAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: TSAKFPLLYKVTVTGSRNPQRLN*GRSKAC
Trigger: GCACGCCTTGCTTCGGCCTCAGTTAAGCCTTTGTGG...ATTTCTAGAACCCGTGACTGTTACTTTATACAGCAAAGGAAACTTTGCAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp CAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGTCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: QYATQDRRRGVLQASSRWSLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...CCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp ACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAAGGTATTTTCCAGTTCACGATaGCAGTCTACCAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: TEYLLTGGNKKGLREAKVFSSSR*QSTNFL
Trigger: AAGGAAATTGGTAGACTGTCATCGTGAACTGGAAAA...TACCTTGGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATGCTCGGATATGTTCTTaGTGGCGATCTGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSTGIRETTCEKAIESMDARICS*WRSACS
Trigger: GCTGCAAGCAGATCGCCATCAAGAACATATCCGAGC...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp GGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGCTCGGATATGTTCTTaGTGGCGATCTGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GILWHFLLQALLYPRVFLARICS*WRSACS
Trigger: GCTGCAAGCAGATCGCCATCAAGAACATATCCGAGC...AAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGCTCGGATATGTTCTTaGTGGCGATCTGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQARICS*WRSACS
Trigger: GCTGCAAGCAGATCGCCATCAAGAACATATCCGAGC...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAAGGTAGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TEYLLTGGNKKGLREAKVAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...TACCTTGGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp GGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTCTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: GYHKHQTACLRNWTTALPLVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...AGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACTGCTCCTCCAGTTGCTaGCGACGTTGCAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: VSKGLTCSLASFISLYKDCSSSC*RRCKLV
Trigger: CACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCA...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTTGCTCCTCCAGTTGCTaGCGACGTTGCAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSCSSSC*RRCKLV
Trigger: CACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCA...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCCTTTTATCAGAAGCTaGTACATTTTCATCGGCATC +
Preference number: 4 (lower is better)
Translates to: SMLHRIDAEECYRLLHDGPFIRS*YIFIGI
Trigger: GATGCCGATGAAAATGTATCAGCTTCTGATAAAAGG...CCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR TCA 90 bp AGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGAATCTTCATCATGAGTaGTTACCAGAAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SMLHRIDAEECYRLLHDGNLHHE*LPEAGS
Trigger: ACTTCCAGCTTCTGGTAATCACTCATGATGAAGATT...CCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ACATCTGCAAAGTTTCCTTTGCTGTATAAAGTAACAGTCACGGGTTCTAGAAATCAGGCCTTGACTCTGTaGGTGAGCCTGGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TSAKFPLLYKVTVTGSRNQALTL*VSLACL
Trigger: AAGGCAAGCCAGGCTCACTCACAGAGTCAAGGCCTG...ATTTCTAGAACCCGTGACTGTTACTTTATACAGCAAAGGAAACTTTGCAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTCTTAGAAGTGGCATCTaGAGAGCAAATGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTLRSGI*RANGEA
Trigger: GGCCTCTCCATTTGCTCTTCAGATGCCACTTCTAAG...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGTCCCCAATTTCCTACTaGTTACTTTCACGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IDGEASMLHRIDAEECYRSPISY*LLSREA
Trigger: TGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGGA...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGCGAGGCCACAGGACTaGCAAAAGATCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IIVTSVRHTLALSSSGIIARPQD*QKILPA
Trigger: GGCTGGCAGGATCTTTTGGCAGTCCTGTGGCCTCGC...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGCGAGGCCACAGGACTaGCAAAAGATCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSARPQD*QKILPA
Trigger: GGCTGGCAGGATCTTTTGGCAGTCCTGTGGCCTCGC...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATTCCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG +
Preference number: 4 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYSARPE*SSFRSG
Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGA...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR GCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTTGACATCACGAAATTaGAGACGAATCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFLTSRN*RRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AGTAATGAACTGGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTGAAGATCCTTCCAACTaGTGTAATTCATACTTCACA +
Preference number: 4 (lower is better)
Translates to: SNELGVNCCGSSQHGSLFEDPSN*CNSYFT
Trigger: TGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTC...AAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCCAGTTCATTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp TCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTTTAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SIMLCLMGTSPSISSRRFKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...AAAGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TGTCTTTCACTGAATGGTCCACGCTCAAAGCCATCCAATTCTAGCTGTGTTGCCTCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 4 (lower is better)
Translates to: CLSLNGPRSKPSNSSCVASKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...GGCAACACAGCTAGAATTGGATGGCTTTGAGCGTGGACCATTCAGTGAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGTCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 4 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLSKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TGGAAGGATTCAAGATGTCAGCTGGCAATTCCAGGAAAAACTGTGATTAGGCTTCCTTTTGTCCAGCACTaGATCGTCCTCGCATATCCA +
Preference number: 4 (lower is better)
Translates to: WKDSRCQLAIPGKTVIRLPFVQH*IVLAYP
Trigger: TGGATATGCGAGGACGATGCAGTGCTGGACAAAAGG...AAGCCTAATCACAGTTTTTCCTGGAATTGCCAGCTGACATCTTGAATCCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTCCTTTTGTCCAGCACTaGATCGTCCTCGCATATCCA +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTPFVQH*IVLAYP
Trigger: TGGATATGCGAGGACGATGCAGTGCTGGACAAAAGG...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp ACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAAGGTACTCAACCAGAGCATGTaGAAGAGATTCAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: TEYLLTGGNKKGLREAKVLNQSM*KRFNVF
Trigger: GAAAACATTGAATCTCTTGCACATGCTCTGGTTGAG...TACCTTGGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCGGAATGAAAGATAACTaGAACAAGAGTGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGGMKDN*NKSEMK
Trigger: CTTCATTTCACTCTTGTTGCAGTTATCTTTCATTCC...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAACTGAGGTATATATTTTaGCAAACTCCCCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKLRYIF*QTPQSL
Trigger: GAGACTCTGGGGAGTTTGGCAAAATATATACCTCAG...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp AGTAGGGCTGGGGATTGTCGGGACAGTTTGAGTACAATGCAGTGGAGGGTGACAGGGATGTCACTATGTTaGTCAGACTTTCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SRAGDCRDSLSTMQWRVTGMSLC*SDFLFK
Trigger: TTTAAAAAGAAAGTCTGAGCAACATAGTGACATCCC...TGTCACCCTCCACTGCATTGTACTCAAACTGTCCCGACAATCCCCAGCCCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGAGGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGCATTCATCAGTTGGTTaGCAGTTTTTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RGIRIDGEASMLHRIDAEHSSVG*QFLLPL
Trigger: AAGGGGAAGCAAAAACTGCCAACCAACTGATGAATG...CTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp AGAGCCAGGACTGAAATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RARTEIQAIRLHNQVFKFNCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...GAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGATTTCAGTCCTGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTGTCAGCTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFCQLCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRSWLTC*TVRSKS
Trigger: AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGA...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTACTTCAAATTTTAGTTaGGGAAACCAAGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GEASMLHRIDAEECYRLLTSNFS*GNQVPE
Trigger: CTCTGGGACTTGGTTTCCCCAACTAAAATTTGAAGT...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAATTCAAGATGTCAGCTaGCAATTCCAGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: YATQDRRRGVLQASSRWAIQDVS*QFQEKL
Trigger: CAGTTTTTCCTGGAATTGCCAGCTGACATCTTGAAT...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp GATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCATTATAGCTACAGATaGCACAAAACCATGCCATGT +
Preference number: 4 (lower is better)
Translates to: DGEASMLHRIDAEECYRLHYSYR*HKTMPC
Trigger: ACATGGCATGGTTTTGTGCCATCTGTAGCTATAATG...AAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp CAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGCATTATAGCTACAGATaGCACAAAACCATGCCATGT +
Preference number: 4 (lower is better)
Translates to: QYATQDRRRGVLQASSRWHYSYR*HKTMPC
Trigger: ACATGGCATGGTTTTGTGCCATCTGTAGCTATAATG...CCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATTTTCTTTTTAAACTGTaGAAAGCAGCTGTGTCGGTA +
Preference number: 4 (lower is better)
Translates to: ATQDRRRGVLQASSRWADFLFKL*KAAVSV
Trigger: TACCGACACAGCTGCTTTCCACAGTTTAAAAAGAAA...ATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAAGGGCCTACACCTGTaGAGCCCTAGGGACGCTTCT +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTKGLHL*SPRDAS
Trigger: AGAAGCGTCCCTAGGGCTCCACAGGTGTAGGCCCTT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR TCA 90 bp ACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTTCTCTCACATCTGTTTCTTaGGCAACCTTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: TTNIKQLVFVTGQLLFLSLTSVS*ATLGSC
Trigger: ACACGATCCCAAGGTTGCTCAAGAAACAGATGTGAG...AGAAAGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTCTCACATCTGTTTCTTaGGCAACCTTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAALTSVS*ATLGSC
Trigger: ACACGATCCCAAGGTTGCTCAAGAAACAGATGTGAG...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGAAACCCCAAGAGAACTaGTCATTTCTCGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPKPQEN*SFLGQF
Trigger: AAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTT...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTTCAACAAGCAGTTCTaGTTTTTCCTGATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GIRIDGEASMLHRIDAEEFNKQF*FFLIEK
Trigger: CTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAA...CTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTCACGTTCAGCTTTTATaGGCTCCTGGTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTHVQLL*APGPVQ
Trigger: TTGAACTGGACCAGGAGCTCATAAAAGCTGAACGTG...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCCACGTTCAGCTTTTATaGGCTCCTGGTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSHVQLL*APGPVQ
Trigger: TTGAACTGGACCAGGAGCTCATAAAAGCTGAACGTG...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTCACGTTCAGCTTTTATaGGCTCCTGGTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAAHVQLL*APGPVQ
Trigger: TTGAACTGGACCAGGAGCTCATAAAAGCTGAACGTG...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCCTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCLVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTTGCTCCTCCAGTTGCTaGCGACGTTGCAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: IQAIRLHNQVFKFPILNSCSSSC*RRCKLV
Trigger: CACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCA...ACTGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTACAAAATCTTCATCATaGGTGATTACCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IRIDGEASMLHRIDAEECTKSSS*VITRSW
Trigger: CCAGCTTCTGGTAATCACTCATGATGAAGATTTTGT...ACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATTTCACTGCCTATATTaGTCGTGTATTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SQYATQDRRRGVLQASSRFHCLY*SCIAFV
Trigger: AACAAAGGCAATACACGATCAATATAGGCAGTGAAA...TCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGTGGTGTGCTAGGATTTaGGCCCAGGCAGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKWCARI*AQAVWL
Trigger: GAGCCAGACTGCCTGGGCTCAAATCCTAGCACACCA...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGATAGAATCAATGGATTaGAATCTCAGTGGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLIESMD*NLSGVK
Trigger: TTTGACCCCACTGAGATTTCAATCCATTGATTCTAT...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp AGAGGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGCAGGGAAACAACCTGTaGAAAAGCCATAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: RGIRIDGEASMLHRIDAEQGNNL*KSHRIN
Trigger: ATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTG...CTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTGATAATTTAAAGCTATaGGACTGGATGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: GEASMLHRIDAEECYRLLDNLKL*DWMRSP
Trigger: TGGTGATCTCATCCAGTCTCATAGCTTTAAATTATC...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGAGATAATTTAAAGCTATaGGACTGGATGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: SQYATQDRRRGVLQASSRDNLKL*DWMRSP
Trigger: TGGTGATCTCATCCAGTCTCATAGCTTTAAATTATC...TCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGAGCTCACTGCAGCCTTaGACCCTCAGACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKSSLQP*TLRLQG
Trigger: TCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCT...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTGAAGATCCTTCCAACTaGTGTAATTCATACTTCACA +
Preference number: 4 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFEDPSN*CNSYFT
Trigger: TGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTC...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGAGTCGCAGTTTAGACTaGAAATCACTGATGACTTCT +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPSRSLD*KSLMTS
Trigger: AGAAGTCATCAGTGATTTGCAGTCTAAACTGCGACT...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TGTCTTTCACTGAATGGTCCACGCTCAAAGCCATCCAATTCTAGCTGTGTTGCCAGTCGCAGTTTAGACTaGAAATCACTGATGACTTCT +
Preference number: 4 (lower is better)
Translates to: CLSLNGPRSKPSNSSCVASRSLD*KSLMTS
Trigger: AGAAGTCATCAGTGATTTGCAGTCTAAACTGCGACT...GGCAACACAGCTAGAATTGGATGGCTTTGAGCGTGGACCATTCAGTGAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp AAGACTGAACTTCAGTGGATAATTCCACAGTCTGCTCCTCCAGTTGCTGACGACAGTCGCAGTTTAGACTaGAAATCACTGATGACTTCT +
Preference number: 4 (lower is better)
Translates to: KTELQWIIPQSAPPVADDSRSLD*KSLMTS
Trigger: AGAAGTCATCAGTGATTTGCAGTCTAAACTGCGACT...GTCGTCAGCAACTGGAGGAGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCACATATCCTTCAAATCAATTATaGTTTGCCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: LLGMKAATLRSAAKDATYPSNQL*FASWAQ
Trigger: TTGTGCCCATGAGGCAAAGCATAATTGATTTGAAGG...ATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGCCTTCAAATCAATTATaGTTTGCCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLPSNQL*FASWAQ
Trigger: TTGTGCCCATGAGGCAAAGCATAATTGATTTGAAGG...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CTGCCAGTCCTACTCATGGGCCTGCTCCCAGAAAAATGTACACAGAATTCTGCCCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 4 (lower is better)
Translates to: LPVLLMGLLPEKCTQNSALSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...GGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATGAGTAGGACTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR GCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCCCTTCCACATGGCAATaGCCACTTAGAGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFPSTWQ*PLREES
Trigger: TGATTCCTCTCTAAGTGGGCATTGCCATGTGGAAGG...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCACATCCTTCCGAGACTaGTTCAGGCAAACTCCTAAG +
Preference number: 4 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPTSFRD*FRQTPK
Trigger: CTTAGGAGTTTGCCTGAAGCAGTCTCGGAAGGATGT...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR CCA 90 bp GGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTTTCTTGAGCAACCTTaGGATCGTGTACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: GIRIDGEASMLHRIDAEEFLEQP*DRVQMY
Trigger: ATACATTTGTACACGATCCCAAGGTTGCTCAAGAAA...CTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCAAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSNCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAATTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKFSCFS*LTCWTV
Trigger: AACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAA...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGTTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPFSCFS*LTCWTV
Trigger: AACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAA...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTAAGACTGAACTTCAGTaGATAATTCCACAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: NQLCFASWAQVPAFHHAAKTELQ*IIPQSA
Trigger: AGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT...AGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAAAGCATCCCGAAATTGTaGTTCTCGAAGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKSIPKL*FSKFFL
Trigger: AAGAAAGAACTTCGAGAACCACAATTTCGGGATGCT...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp ACATCTGCAAAGTTTCCTTTGCTGTATAAAGTAACAGTCACGGGTTCTAGAAATCTGACAGAGGCTGCCTaGAATGGGATGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSAKFPLLYKVTVTGSRNLTEAA*NGMKSS
Trigger: GCTGCTCTTCATCCCATTCCAGGCAGCCTCTGTCAG...ATTTCTAGAACCCGTGACTGTTACTTTATACAGCAAAGGAAACTTTGCAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp CCAGAGAGAGAGGTCACTGGATTTATAAAGTTAAAAGCAGAGCCAAACATACATGGCTTGCCTTCCACATaGCAATGCCCACTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: PEREVTGFIKLKAEPNIHGLPST*QCPLRE
Trigger: CTCTCTAAGTGGGCATTGCCATGTGGAAGGCAAGCC...ATGTATGTTTGGCTCTGCTTTTAACTTTATAAATCCAGTGACCTCTCTCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGTGGTTGCATTCTGTGTaGAATGGAAGGATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: IDGEASMLHRIDAEECYRWLHSV*NGRIQD
Trigger: ATCTTGAATCCTTCCATTCCACACAGAATGCAACCA...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATGACCCGGTATGGTCCTaGCTGACTCTGAATGACAAA +
Preference number: 4 (lower is better)
Translates to: RSTGIRETTCEKAIESMDDPVWS*LTLNDK
Trigger: TTTGTCATTCAGAGTCAGCCAGGACCATACCGGGTC...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTAACCCATGGGCTTCTTaGAATGAAAGCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTNPWAS*NESSHS
Trigger: AGAGTGGCTGCTTTCATTCCAAGAAGCCCATGGGTT...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
3UTR CAA 72 bp TGTCTTTGGTCAGCATCTCCATTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCTCCATCTCCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: CLWSASPFGYVL*YDGLTAPSPGQ
Trigger: TTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAATGGAGATGCTGACCAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR CAA 72 bp CTTTGTCTTTGGTCAGCATCTCCATTTGGGTACGTGTaGTTGTATGATGGTTTAACTGCTCCATCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LCLWSASPFGYV*LYDGLTAPSPG
Trigger: ACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAATGGAGATGCTGACCAAAGACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
3UTR CAA 72 bp CATGCCATAGATCTTTGCACAGCTATAAGTTCTCCATaGACATCACGAAATTGCAGACGAATCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HAIDLCTAISSP*TSRNCRRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAATGGAGAACTTATAGCTGTGCAAAGATCTATGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR TCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTTTTCCAGTTCACGATaGCAGTCTACCAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFFSSSR*QSTNFL
Trigger: AAGGAAATTGGTAGACTGTCATCGTGAACTGGAAAA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGTGTGTTGCCAAAGACTaGATTAATGAATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: IDGEASMLHRIDAEECYRCVAKD*INESLA
Trigger: AGCTAGAGATTCATTAATTCAGTCTTTGGCAACACA...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGTGTGTTGCCAAAGACTaGATTAATGAATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPCVAKD*INESLA
Trigger: AGCTAGAGATTCATTAATTCAGTCTTTGGCAACACA...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTCACGTTCAGCTTTTATaGGCTCCTGGTCCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSHVQLL*APGPVQ
Trigger: TTGAACTGGACCAGGAGCTCATAAAAGCTGAACGTG...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AGAGCCAGGACTGAAATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: RARTEIQAIRLHNQVFKFLVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...GAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGATTTCAGTCCTGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTCTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAALVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GYVLLYDGLTAPSPGQVYVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...GTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGTTCTCTTCCAACTTCTaGTGTTCACTTTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: IDGEASMLHRIDAEECYRFSSNF*CSLFIC
Trigger: GCAAATGAAAAGTGAACATCAGAAGTTGGAAGAGAA...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp TGTGATGGCTATTCATTCCAATGTGGGGAAGGGGGATATTTGGAGACTGATCTAGAAGTTACGCTGCTGTaGGCGACTTTTTATTATCTC +
Preference number: 4 (lower is better)
Translates to: CDGYSFQCGEGGYLETDLEVTLL*ATFYYL
Trigger: GAGATAATAAAAAGTCGCTCACAGCAGCGTAACTTC...TAGATCAGTCTCCAAATATCCCCCTTCCCCACATTGGAATGAATAGCCATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AGAGGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGATAGAATCAATGGATTaGAATCTCAGTGGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RGIRIDGEASMLHRIDAEIESMD*NLSGVK
Trigger: TTTGACCCCACTGAGATTTCAATCCATTGATTCTAT...CTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAACCATGGAATTTAAGTTaGATAAGGAGAGAAGTACAG +
Preference number: 4 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKPWNLS*IRREVQ
Trigger: CTGTACTTCTCTCCTTATTCAACTTAAATTCCATGG...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTGGGGTTCATGGTCTTTaGTCCCAGGTTAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVGVHGL*SQVKPQ
Trigger: CTGAGGCTTAACCTGGGATCAAAGACCATGAACCCC...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR TCA 90 bp CGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCCACTGAAGGCGGCTACTaGAGACTTACCGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RCMSLLTFCSLFLNSGISTEGGY*RLTVFP
Trigger: GGGAAAGACGGTAAGTCTTCAGTAGCCGCCTTCAGT...GGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR GCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTTCCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSSARPE*SSFRSG
Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGA...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTTGACATCACGAAATTaGAGACGAATCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVLTSRN*RRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAA...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTTGACATCACGAAATTaGAGACGAATCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVLTSRN*RRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAA...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGCTGACCTTTTCACCATaGTTTGTTCTAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLLTFSP*FVLVMT
Trigger: AGTCATTACTAGAACAAAGCATGGTGAAAAGGTCAG...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTACTGTGTCTAACTTGTaGTGTTTCTCTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GYHKHQTACLRNWTTALPTVSNL*CFSCFS
Trigger: GGAGAAACAAGAGAAACAGCACAAGTTAGACACAGT...AGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp GGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTCTCAACCAGAGCATGTaGAAGAGATTCAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: GYHKHQTACLRNWTTALPLNQSM*KRFNVF
Trigger: GAAAACATTGAATCTCTTGCACATGCTCTGGTTGAG...AGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR GCA 90 bp TGTGATGGCTATTCATTCCAATGTGGGGAAGGGGGATATTTGGAGACTGATCTATCTCCTTCTCAACAGTaGTTTGAGAAGAAGCATGCA +
Preference number: 4 (lower is better)
Translates to: CDGYSFQCGEGGYLETDLSPSQQ*FEKKHA
Trigger: TGCATGCTTCTTCTCAAAGCACTGTTGAGAAGGAGA...TAGATCAGTCTCCAAATATCCCCCTTCCCCACATTGGAATGAATAGCCATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp TGGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATAGCTTTAATCACATCTaGAAAGTTTCCTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: WVCTVENFLSVERALSLDSFNHI*KVSFAV
Trigger: TACAGCAAAGGAAACTTTGCAGATGTGATTAAAGCT...ATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp AGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGAAGCTTTAATCACATCTaGAAAGTTTCCTTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SQYATQDRRRGVLQASSRSFNHI*KVSFAV
Trigger: TACAGCAAAGGAAACTTTGCAGATGTGATTAAAGCT...TCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp TGGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATGGGATGTCACTATGTTaGTCAGACTTTCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: WVCTVENFLSVERALSLDGMSLC*SDFLFK
Trigger: TTTAAAAAGAAAGTCTGAGCAACATAGTGACATCCC...ATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp CTGTGTCTCCCTTCAGCATCACCACTCGGTAGTTATAATTCCGCCTTTTATCAGCATGCCATAGATCTTTaGACAGCTATAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCLPSASPLGSYNSAFYQHAIDL*TAISSP
Trigger: TGGAGAACTTATAGCTGTGCAAAGATCTATGGCATG...CTGATAAAAGGCGGAATTATAACTACCGAGTGGTGATGCTGAAGGGAGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR GCA 90 bp CTGGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCATGCCATAGATCTTTaGACAGCTATAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LATTNIKQLVFVTGQLLFHAIDL*TAISSP
Trigger: TGGAGAACTTATAGCTGTGCAAAGATCTATGGCATG...GAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGCTGACCTTTTCACCATaGCATAGATCTTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMLTFSP*HRSLHS
Trigger: GCTGTGCAAAGATCTATGGCATGGTGAAAAGGTCAG...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACATGTACACAGAATTCTaGCTGGTTTCTGGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VSKGLTCSLASFISLYKDMYTEF*LVSGGS
Trigger: TGAACCCCCAGAAACCAGGCAGAATTCTGTGTACAT...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CCA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGTTTCTTGAGCAACCTTaGGATCGTGTACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: QINYALPHGHKSQHFITPFLEQP*DRVQMY
Trigger: ATACATTTGTACACGATCCCAAGGTTGCTCAAGAAA...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAAGTTTAATTGCAGACGAATCTaGGCTCTCACATCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLLLQLLTTLQISGYLKFNCRRI*ALTSVS
Trigger: AGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATT...AAACTTCAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCATTTGAAGATGTTAACTaGGCTTCCTTACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: YATQDRRRGVLQASSRWAFEDVN*ASLLVI
Trigger: GATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGTCTTTCACTGAATaGTCCACGCTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSLSFTE*STLKAI
Trigger: GATGGCTTTGAGCGTGGACCATTCAGTGAAAGACAG...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTCTGTCTTTCACTGAATaGTCCACGCTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: GILWHFLLQALLYPRVFLLSFTE*STLKAI
Trigger: GATGGCTTTGAGCGTGGACCATTCAGTGAAAGACAG...AAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTGCTTTTATGAGCTCCTaGTCCAGTTCAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAAAFMSS*SSSRIL
Trigger: CAGGATTCTTGAACTGGACCAGGAGCTCATAAAAGC...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLNCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTCAGCTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAACQLCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGGTTCCTTGTTCAATTTaGCAAGTCTGTCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMVPCSI*QVCPWS
Trigger: AGACCAGGGACAGACTTGCCAAATTGAACAAGGAAC...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp CCAGAGAGAGAGGTCACTGGATTTATAAAGTTAAAAGCAGAGCCAAACATACATTGGCTCCAGCCAGCATaGCTCGCTGTTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: PEREVTGFIKLKAEPNIHWLQPA*LAVLMI
Trigger: AATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCA...ATGTATGTTTGGCTCTGCTTTTAACTTTATAAATCCAGTGACCTCTCTCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGTGGCTCCAGCCAGCATaGCTCGCTGTTTTGATGATT +
Preference number: 4 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLWLQPA*LAVLMI
Trigger: AATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCA...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 4 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFSLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp ACAGCCTTGGAAACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: TALETPRELIISRSISAHFSCFS*LTCWTV
Trigger: AACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAA...GTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTTCCAAGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCAAATCAAGACCCGGTATaGTCCTGGCTGACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSNQDPV*SWLTLN
Trigger: ATTCAGAGTCAGCCAGGACCATACCGGGTCTTGATT...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAATTTCTTTTTAAACTGTaGAAAGCAGCTGTGTCGGTA +
Preference number: 4 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKFLFKL*KAAVSV
Trigger: TACCGACACAGCTGCTTTCCACAGTTTAAAAAGAAA...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAACTTCCTCAATAAGTaGGATCAAGTTCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLNFLNK*DQVPKA
Trigger: TGCTTTAGGAACTTGATCCCACTTATTGAGGAAGTT...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651160.1
3UTR CAA 72 bp TTGCACAGCTATAAGTTCTCCATTGACATCACGAAATaGCAGACGAATCTGGGCTCTCACATCTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LHSYKFSIDITK*QTNLGSHICFL
Trigger: CAAGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAATGGAGAACTTATAGCTGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR TCA 90 bp ACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTAGAGCTCAGAAAACCCCAAGAGAACTaGTCATTTCTCGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: TPRELIISRSISAHLELRKPQEN*SFLGQF
Trigger: AAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTT...TCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAACCCCAAGAGAACTaGTCATTTCTCGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCKPQEN*SFLGQF
Trigger: AAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTT...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCTTTTCCAGTTCACGATaGCAGTCTACCAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCFSSSR*QSTNFL
Trigger: AAGGAAATTGGTAGACTGTCATCGTGAACTGGAAAA...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACGCTCGGATATGTTCTTaGTGGCGATCTGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: WSCISLRFNSILLETVSNARICS*WRSACS
Trigger: GCTGCAAGCAGATCGCCATCAAGAACATATCCGAGC...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGCTCGGATATGTTCTTaGTGGCGATCTGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSARICS*WRSACS
Trigger: GCTGCAAGCAGATCGCCATCAAGAACATATCCGAGC...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VSKGLTCSLASFISLYKDVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGTGCTCCTCCAGTTGCTaGCGACGTTGCAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQCSSSC*RRCKLV
Trigger: CACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCA...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCAAAGAATTGCTGGGGTTaGGGACCACAGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSKNCWG*GPQENC
Trigger: ACAATTTTCCTGTGGTCCTCAACCCCAGCAATTCTT...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp AGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAAGTTTCACACCATAGATCTTTaGACAGCTATAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLLQLLTTLQISGYLKFHTIDL*TAISSP
Trigger: TGGAGAACTTATAGCTGTGCAAAGATCTATGGTGTG...AAACTTCAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGTTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCATCTCATCAAACTTTTaGTTCAAAGCCTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRISSNF*FKAFPS
Trigger: TGAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGAT...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTGAAGATCCTTCCAACTaGTGTAATTCATACTTCACA +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFEDPSN*CNSYFT
Trigger: TGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTC...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACTGTTTTTCTCAGCCTTaGTTAACTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GYVLLYDGLTAPSPGQVYCFSQP*LTHVQL
Trigger: AAGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACA...GTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp AGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAAGTTTTGTTTTTCTCAGCCTTaGTTAACTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLLLQLLTTLQISGYLKFCFSQP*LTHVQL
Trigger: AAGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACA...AAACTTCAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: VSKGLTCSLASFISLYKDKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp ACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTAGAGCTCAGACCTTCAAATCAATTATaGTTTGCCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: TPRELIISRSISAHLELRPSNQL*FASWAQ
Trigger: TTGTGCCCATGAGGCAAAGCATAATTGATTTGAAGG...TCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp AAGACTGAACTTCAGTGGATAATTCCACAGTCTGCTCCTCCAGTTGCTGACGACCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 4 (lower is better)
Translates to: KTELQWIIPQSAPPVADDLSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...GTCGTCAGCAACTGGAGGAGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCTCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 4 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPSKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCAAAAGGAAACGGGATGTaGAGGTGTTGCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAAKGNGM*RCCREE
Trigger: CTCCTCCCTGCAACACCTGCACATCCCGTTTCCTTT...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTTCCTTAACAGTTACCTaGCAGTCCTACTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVSLTVT*QSYSWA
Trigger: GGCCCATGAGTAGGACTGGCAGGTAACTGTTAAGGA...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CCA 90 bp GGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTTTCTTGAGCAACCTTaGGATCGTGTACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: GYHKHQTACLRNWTTALPFLEQP*DRVQMY
Trigger: ATACATTTGTACACGATCCCAAGGTTGCTCAAGAAA...AGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTAATTGCAGACGAATCTaGGCTCTCACATCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVNCRRI*ALTSVS
Trigger: AGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATT...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GAAATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACGCTTTTATGAGCTCCTaGTCCAGTTCAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: EIQAIRLHNQVFKFPILNAFMSS*SSSRIL
Trigger: CAGGATTCTTGAACTGGACCAGGAGCTCATAAAAGC...GTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ATGGTGAAGTGTGGGTGGAAGAATGGTGAAATCATTGATACTTTACAACAAGTTAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: MVKCGWKNGEIIDTLQQVNCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...AACTTGTTGTAAAGTATCAATGATTTCACCATTCTTCCACCCACACTTCACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CCA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCTCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPSWLTC*TVRSKS
Trigger: AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGA...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCTTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCFSCFS*LTCWTV
Trigger: AACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAA...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GAGCCAGGACTGAAATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCTTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: EPGLKSKPLGSITRFLNSFSCFS*LTCWTV
Trigger: AACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAA...GGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGATTTCAGTCCTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACACATCTCACCATTTCTaGTCATCCTCAGATATTAAT +
Preference number: 4 (lower is better)
Translates to: RIDGEASMLHRIDAEECYTSHHF*SSSDIN
Trigger: ATTAATATCTGAGGATGACCAGAAATGGTGAGATGT...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTCTATTCATTCCAATGTaGGGAAGGGGGATATTTGGA +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTLFIPM*GRGIFG
Trigger: TCCAAATATCCCCCTTCCCCACATTGGAATGAATAG...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATGGATTGAAATCTCAGTaGGGTCAAAGAATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSTGIRETTCEKAIESMDGLKSQ*GQRIAG
Trigger: CCCAGCAATTCTTTGACCCCACTGAGATTTCAATCC...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTTGCCAGTCCTACTCATaGGCCTGCTCCCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVCQSYS*ACSQKN
Trigger: ATTTTTCTGGGAGCAGGCCCATGAGTAGGACTGGCA...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR CAA 72 bp GTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGATCTAAGTCTATTCCT +
Preference number: 4 (lower is better)
Translates to: VSNLCCFSCFSW*TCWTVRSKSIP
Trigger: AGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCACTCACATCTGTTTCTTaGGCAACCTTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSLTSVS*ATLGSC
Trigger: ACACGATCCCAAGGTTGCTCAAGAAACAGATGTGAG...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp CTCCATTTGCTTCTTTCGGCTATCCAAGGCTTTAATTTCATTGTCAAGTTTCATCTCACATCTGTTTCTTaGGCAACCTTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: LHLLLSAIQGFNFIVKFHLTSVS*ATLGSC
Trigger: ACACGATCCCAAGGTTGCTCAAGAAACAGATGTGAG...ATGAAACTTGACAATGAAATTAAAGCCTTGGATAGCCGAAAGAAGCAAATGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTTCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSSLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAASLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVSLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSVRVVV*WFNCSI
Trigger: GATGGAGCAGTTAAACCATCATACAACAACACGTAC...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GAAATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: EIQAIRLHNQVFKFPILNVRVVV*WFNCSI
Trigger: GATGGAGCAGTTAAACCATCATACAACAACACGTAC...GTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACACTTGTTTCTCCTGGTTaGCTTGTTGGACAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTLVSPG*LVGQFD
Trigger: ATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAG...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTTGCTCCTCCAGTTGCTaGCGACGTTGCAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSCSSSC*RRCKLV
Trigger: CACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCA...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCCCTTTTATCAGAAGCTaGTACATTTTCATCGGCATC +
Preference number: 4 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPPFIRS*YIFIGI
Trigger: GATGCCGATGAAAATGTATCAGCTTCTGATAAAAGG...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp GGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACACAATCTCTGAGCACTaGTCGATGTTCTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: GYVLLYDGLTAPSPGQVYTISEH*SMFFLI
Trigger: GATTAAAAAGAACATCGATCAGTGCTCAGAGATTGT...GTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTGCTAAAGTCACACAGTaGGTAAGTTGTAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVAKVTQ*VSCRAR
Trigger: CCTGGCTCTACAACTTACTCACTGTGTGACTTTAGC...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTGCTAAAGTCACACAGTaGGTAAGTTGTAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTAKVTQ*VSCRAR
Trigger: CCTGGCTCTACAACTTACTCACTGTGTGACTTTAGC...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTTGACATCACGAAATTaGAGACGAATCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NFSNVVSKGLTCSLASFILTSRN*RRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAA...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR GCA 90 bp ACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTTCTAGTCGCAGTTTAGACTaGAAATCACTGATGACTTCT +
Preference number: 4 (lower is better)
Translates to: TTNIKQLVFVTGQLLFLSSRSLD*KSLMTS
Trigger: AGAAGTCATCAGTGATTTGCAGTCTAAACTGCGACT...AGAAAGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTCCTTCAAATCAATTATaGTTTGCCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSPSNQL*FASWAQ
Trigger: TTGTGCCCATGAGGCAAAGCATAATTGATTTGAAGG...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp ACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTTCTACTGTGTCTAACTTGTaGTGTTTCTCTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TTNIKQLVFVTGQLLFLSTVSNL*CFSCFS
Trigger: GGAGAAACAAGAGAAACAGCACAAGTTAGACACAGT...AGAAAGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCACTGTGTCTAACTTGTaGTGTTTCTCTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSTVSNL*CFSCFS
Trigger: GGAGAAACAAGAGAAACAGCACAAGTTAGACACAGT...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCATCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 4 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSSKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTCTCAACCAGAGCATGTaGAAGAGATTCAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTLNQSM*KRFNVF
Trigger: GAAAACATTGAATCTCTTGCACATGCTCTGGTTGAG...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTGACCTTTTCACCATaGCATAGATCTTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYLTFSP*HRSLHS
Trigger: GCTGTGCAAAGATCTATGGCATGGTGAAAAGGTCAG...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCTTTCTTGAGCAACCTTaGGATCGTGTACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCFLEQP*DRVQMY
Trigger: ATACATTTGTACACGATCCCAAGGTTGCTCAAGAAA...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTAATTGCAGACGAATCTaGGCTCTCACATCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSNCRRI*ALTSVS
Trigger: AGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATT...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTAATTGCAGACGAATCTaGGCTCTCACATCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GILWHFLLQALLYPRVFLNCRRI*ALTSVS
Trigger: AGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATT...AAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ACAGCCTTGGAAACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTTGAAGATGTTAACTaGGCTTCCTTACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: TALETPRELIISRSISAHFEDVN*ASLLVI
Trigger: GATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA...GTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTTCCAAGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTCTGTCTTTCACTGAATaGTCCACGCTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVLSFTE*STLKAI
Trigger: GATGGCTTTGAGCGTGGACCATTCAGTGAAAGACAG...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTCATTCATCAGTTGGTTaGCAGTTTTTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSHSSVG*QFLLPL
Trigger: AAGGGGAAGCAAAAACTGCCAACCAACTGATGAATG...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTTACCCATTCATCAGTTGGTTaGCAGTTTTTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KPLGSITRFLNSPSLTVTHSSVG*QFLLPL
Trigger: AAGGGGAAGCAAAAACTGCCAACCAACTGATGAATG...GGTAACTGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATGCTTTTATGAGCTCCTaGTCCAGTTCAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYAFMSS*SSSRIL
Trigger: CAGGATTCTTGAACTGGACCAGGAGCTCATAAAAGC...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR CCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTAACTGCTCCATCTCCTaGTCAAGTTTACGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSNCSIS*SSLRRV
Trigger: GACCCTGCGTAAACTTGACCAGGAGATGGAGCAGTT...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 4 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFSLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTTGTTCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: TCWTVRSKSIPCSLAACCSWLTC*TVRSKS
Trigger: AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGA...ACAACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACAAGACTGAACTTCAGTaGATAATTCCACAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSKGLTCSLASFISLYKDKTELQ*IIPQSA
Trigger: AGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGAAGACTGAACTTCAGTaGATAATTCCACAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMKTELQ*IIPQSA
Trigger: AGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTTGGTTGCATTCTGTGTaGAATGGAAGGATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTWLHSV*NGRIQD
Trigger: ATCTTGAATCCTTCCATTCCACACAGAATGCAACCA...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAATTCCTTGTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQFLVCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAACAAGGAA...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423956.5
CDS-3UTR CCA 90 bp AAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTTACCGGAGGTGATGGAATGTaGCTTTACCAGTACAATCTT +
Preference number: 4 (lower is better)
Translates to: KPLGSITRFLNSPSLTVTGGDGM*LYQYNL
Trigger: AAGATTGTACTGGTAAAGCCACATTCCATCACCTCC...GGTAACTGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651160.1
CDS-3UTR CCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTACACAGAATTCTGCCTaGTTTCTGGGGGTTCATGGT +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTTQNSA*FLGVHG
Trigger: ACCATGAACCCCCAGAAACCAGGCAGAATTCTGTGT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR TCA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTGTCTTTTTGCTTTTCTaGGTACACACCATAGATCTT +
Preference number: 4 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSVFLLF*VHTIDL
Trigger: AAGATCTATGGTGTGTACTCAGAAAAGCAAAAAGAC...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAATCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQSLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AGAGCCAGGACTGAAATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCTTCAACAAGCAGTTCTaGTTTTTCCTGATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RARTEIQAIRLHNQVFKFFNKQF*FFLIEK
Trigger: CTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAA...GAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGATTTCAGTCCTGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTGTGTTGCCAAAGACTaGATTAATGAATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVCVAKD*INESLA
Trigger: AGCTAGAGATTCATTAATTCAGTCTTTGGCAACACA...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR TCA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCTGTGTTGCCAAAGACTaGATTAATGAATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPCVAKD*INESLA
Trigger: AGCTAGAGATTCATTAATTCAGTCTTTGGCAACACA...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ACTGAAGCAAGAACAAGTATCAAATTTATGGTGAAGTGTGGGTGGAAGAATGGTGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: TEARTSIKFMVKCGWKNGVRVVV*WFNCSI
Trigger: GATGGAGCAGTTAAACCATCATACAACAACACGTAC...ACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGCTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR TCA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACAGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTVRVVV*WFNCSI
Trigger: GATGGAGCAGTTAAACCATCATACAACAACACGTAC...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCATCTTCTGGACCCAGTTaGGAAAAGCTGTCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAASSGPS*EKLSRQ
Trigger: TTGCCTAGACAGCTTTTCTCAACTGGGTCCAGAAGA...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTCCATGGAATTTAAGTTaGATAAGGAGAGAAGTACAG +
Preference number: 4 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTPWNLS*IRREVQ
Trigger: CTGTACTTCTCTCCTTATTCAACTTAAATTCCATGG...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAAGTAAACGTTCTACTTaGTGGATGCCCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQSKRST*WMPKIT
Trigger: AGTGATTTTGGGCATCCATCAAGTAGAACGTTTACT...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651160.1
CDS-3UTR GCA 90 bp ACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTTGTCACACCATAGATCTTTaGACAGCTATAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TCWTVRSKSIPCSLAACCHTIDL*TAISSP
Trigger: TGGAGAACTTATAGCTGTGCAAAGATCTATGGTGTG...ACAACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTCTGACCTTTTCACCATaGTTTGTTCTAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVLTFSP*FVLVMT
Trigger: AGTCATTACTAGAACAAAGCATGGTGAAAAGGTCAG...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGGAAGATCCTTCCAACTaGTGTAATTCATACTTCACA +
Preference number: 4 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMEDPSN*CNSYFT
Trigger: TGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTC...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATAGTCGCAGTTTAGACTaGAAATCACTGATGACTTCT +
Preference number: 4 (lower is better)
Translates to: RSTGIRETTCEKAIESMDSRSLD*KSLMTS
Trigger: AGAAGTCATCAGTGATTTGCAGTCTAAACTGCGACT...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp CTCCATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATCCTTCAAATCAATTATaGTTTGCCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: LHNCNICQAYFGTFFFRHPSNQL*FASWAQ
Trigger: TTGTGCCCATGAGGCAAAGCATAATTGATTTGAAGG...ATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTATGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CTCCATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATACTGTGTCTAACTTGTaGTGTTTCTCTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHNCNICQAYFGTFFFRHTVSNL*CFSCFS
Trigger: GGAGAAACAAGAGAAACAGCACAAGTTAGACACAGT...ATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTATGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAACTGTGTCTAACTTGTaGTGTTTCTCTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQTVSNL*CFSCFS
Trigger: GGAGAAACAAGAGAAACAGCACAAGTTAGACACAGT...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATCCAAAGGGCTTACCTaGTCTTTAGCATCCTTTATC +
Preference number: 4 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTSKGLT*SLASFI
Trigger: GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGA...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCAGCTGGAAGTTACGCTaGTGTGAGCGACTTTTTATT +
Preference number: 4 (lower is better)
Translates to: NFSNVVSKGLTCSLASFISWKLR*CERLFI
Trigger: AATAAAAAGTCGCTCACAGCAGCGTAACTTCCAGCT...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR GCA 90 bp ACTGAAGCAAGAACAAGTATCAAATTTATGGTGAAGTGTGGGTGGAAGAATGGTGTTCTACTTGATGGATaGCCAAAATCACTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TEARTSIKFMVKCGWKNGVLLDG*PKSLLP
Trigger: TGGAAGCAGTGATTTTGGGCATCCATCAAGTAGAAC...ACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR GCA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACAGTTCTACTTGATGGATaGCCAAAATCACTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTVLLDG*PKSLLP
Trigger: TGGAAGCAGTGATTTTGGGCATCCATCAAGTAGAAC...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651160.1
CDS-3UTR GCA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTTCCTACTCATGGGCCTaGTCCCAGAAAAATGTACAC +
Preference number: 4 (lower is better)
Translates to: IIVTSVRHTLALSSSGIISYSWA*SQKNVH
Trigger: GTGTACATTTTTCTGGGAGCAGGCCCATGAGTAGGA...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CCA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTGCAGACGAATCTaGGCTCTCACATCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: MSFFRRCMSLLTFCSLFLNCRRI*ALTSVS
Trigger: AGAAACAGATGTGAGAGCCCAGATTCGTCTGCAATT...AAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCACTGTCTTTCACTGAATaGTCCACGCTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAALSFTE*STLKAI
Trigger: GATGGCTTTGAGCGTGGACCATTCAGTGAAAGACAG...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTCTGTCTTTCACTGAATaGTCCACGCTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSLSFTE*STLKAI
Trigger: GATGGCTTTGAGCGTGGACCATTCAGTGAAAGACAG...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ATGGTGAAGTGTGGGTGGAAGAATGGTGAAATCATTGATACTTTACAACAAGTTTGTCAGCTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: MVKCGWKNGEIIDTLQQVCQLCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA...AACTTGTTGTAAAGTATCAATGATTTCACCATTCTTCCACCCACACTTCACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CCA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTTCCTGGTTGACTTGTTaGACAGTTCGATCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: MSFFRRCMSLLTFCSLFLSWLTC*TVRSKS
Trigger: AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGA...AAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAATTCTCTTGTTTCTCCTaGTTGACTTGTTGGACAGTT +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQFSCFS*LTCWTV
Trigger: AACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAA...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AAATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTACAATCTTCAATTTaGCAAGTCTGTCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSKPLGSITRFLNSPSLTVQSSI*QVCPWS
Trigger: AGACCAGGGACAGACTTGCCAAATTGAAGATTGTAC...TGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651160.1
CDS-3UTR CCA 90 bp ACTGAAGCAAGAACAAGTATCAAATTTATGGTGAAGTGTGGGTGGAAGAATGGTGGAGGTGATGGAATGTaGCTTTACCAGTACAATCTT +
Preference number: 4 (lower is better)
Translates to: TEARTSIKFMVKCGWKNGGGDGM*LYQYNL
Trigger: AAGATTGTACTGGTAAAGCCACATTCCATCACCTCC...ACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGCTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CCA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTATTCTGCCTGGTTTCTaGGGGTTCATGGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIILPGF*GFMVFD
Trigger: ATCAAAGACCATGAACCCCCAGAAACCAGGCAGAAT...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652016.1
3UTR CAA 72 bp ACTCTACAAAGCATAATTCAAAAGCGTGTGACTTGGTaGCATTCTGTGTGGAATGGAAGGATTCAAGATGTC +
Preference number: 4 (lower is better)
Translates to: TLQSIIQKRVTW*HSVWNGRIQDV
Trigger: GACATCTTGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATGCTTTGTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCCTTACTTGTAATCTaGTCACGAATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: NFSNVVSKGLTCSLASFISLLVI*SRISQA
Trigger: AGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGA...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR TCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGTTTTCCAGTTCACGATaGCAGTCTACCAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLFSSSR*QSTNFL
Trigger: AAGGAAATTGGTAGACTGTCATCGTGAACTGGAAAA...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTCAACAAGCAGTTCTaGTTTTTCCTGATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSFNKQF*FFLIEK
Trigger: CTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAA...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTTTCAACAAGCAGTTCTaGTTTTTCCTGATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GILWHFLLQALLYPRVFLFNKQF*FFLIEK
Trigger: CTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAA...AAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCATGTGTTGCCAAAGACTaGATTAATGAATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSCVAKD*INESLA
Trigger: AGCTAGAGATTCATTAATTCAGTCTTTGGCAACACA...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQVRVVV*WFNCSI
Trigger: GATGGAGCAGTTAAACCATCATACAACAACACGTAC...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATGCTGTATGTCTCTATTaGCATTCTGCAGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYAVCLY*HSAVCF
Trigger: GAAACAAACTGCAGAATGTCAATAGAGACATACAGC...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR TCA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCATTCTCTTCCAACTTCTaGTGTTCACTTTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSFSSNF*CSLFIC
Trigger: GCAAATGAAAAGTGAACATCAGAAGTTGGAAGAGAA...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGAATCTTCATCATGAGTaGTTACCAGAAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLNLHHE*LPEAGS
Trigger: ACTTCCAGCTTCTGGTAATCACTCATGATGAAGATT...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATACAAAATCTTCATCATaGGTGATTACCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYTKSSS*VITRSW
Trigger: CCAGCTTCTGGTAATCACTCATGATGAAGATTTTGT...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCAACAATCTCTGAGCACTaGTCGATGTTCTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSTISEH*SMFFLI
Trigger: GATTAAAAAGAACATCGATCAGTGCTCAGAGATTGT...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCAGCATTTCACAATCTCTaGGCACTGATCGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSAFHNL*ALIDVL
Trigger: AAGAACATCGATCAGTGCTCAGAGATTGTGAAATGC...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp ATGGTGAAGTGTGGGTGGAAGAATGGTGAAATCATTGATACTTTACAACAAGTTAATTGTAACAGGAGGTaGTGGAATGTGGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: MVKCGWKNGEIIDTLQQVNCNRR*WNVALP
Trigger: TGGTAAAGCCACATTCCATCACCTCCTGTTACAATT...AACTTGTTGTAAAGTATCAATGATTTCACCATTCTTCCACCCACACTTCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR TCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAATTGTAACAGGAGGTaGTGGAATGTGGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: CWSCISLRFNSILLETVSNCNRR*WNVALP
Trigger: TGGTAAAGCCACATTCCATCACCTCCTGTTACAATT...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651160.1
CDS-3UTR TCA 90 bp ACTGAAGCAAGAACAAGTATCAAATTTATGGTGAAGTGTGGGTGGAAGAATGGTAGTAAACGTTCTACTTaGTGGATGCCCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: TEARTSIKFMVKCGWKNGSKRST*WMPKIT
Trigger: AGTGATTTTGGGCATCCATCAAGTAGAACGTTTACT...ACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGCTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR TCA 90 bp ACTGAAGCAAGAACAAGTATCAAATTTATGGTGAAGTGTGGGTGGAAGAATGGTGTATCAAATTTATGGTaGAGTGTGGGTGGAAGAATG +
Preference number: 4 (lower is better)
Translates to: TEARTSIKFMVKCGWKNGVSNLW*SVGGRM
Trigger: CATTCTTCCACCCACACTTCACCATAAATTTGATAC...ACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGCTTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR GCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTCTGACCTTTTCACCATaGTTTGTTCTAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSLTFSP*FVLVMT
Trigger: AGTCATTACTAGAACAAAGCATGGTGAAAAGGTCAG...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTTTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTTTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGTTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCATCTCATCAAACTTTTaGTTCAAAGCCTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFISSNF*FKAFPS
Trigger: TGAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGAT...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCATCTCATCAAACTTTTaGTTCAAAGCCTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPISSNF*FKAFPS
Trigger: TGAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGAT...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATTGTTTTTCTCAGCCTTaGTTAACTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYCFSQP*LTHVQL
Trigger: AAGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACA...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR GCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAAATCAATTATGCTTTaGCTCATGGGCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTKSIML*LMGTSP
Trigger: GGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp CCCCAATTTCCTACTGATTACTTTCACGTGAAGCATTGTTTTACGCTCTGCTTCCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 4 (lower is better)
Translates to: PQFPTDYFHVKHCFTLCFLSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...GAAGCAGAGCGTAAAACAATGCTTCACGTGAAAGTAATCAGTAGGAAATTGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSLSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTCATTCATCAGTTGGTTaGCAGTTTTTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTHSSVG*QFLLPL
Trigger: AAGGGGAAGCAAAAACTGCCAACCAACTGATGAATG...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp CGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCCCATTCATCAGTTGGTTaGCAGTTTTTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RCMSLLTFCSLFLNSGISHSSVG*QFLLPL
Trigger: AAGGGGAAGCAAAAACTGCCAACCAACTGATGAATG...GGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACTGTCAGCTTTGTCTTTaGTCAGCATCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: WSCISLRFNSILLETVSNCQLCL*SASPFG
Trigger: CCCAAATGGAGATGCTGACCAAAGACAAAGCTGACA...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 4 (lower is better)
Translates to: CFSWLTCWTVRSKSIPCSSLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...GCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp ACATCTGCAAAGTTTCCTTTGCTGTATAAAGTAACAGTCACGGGTTCTAGAAATCTATTCATTCCAATGTaGGGAAGGGGGATATTTGGA +
Preference number: 4 (lower is better)
Translates to: TSAKFPLLYKVTVTGSRNLFIPM*GRGIFG
Trigger: TCCAAATATCCCCCTTCCCCACATTGGAATGAATAG...ATTTCTAGAACCCGTGACTGTTACTTTATACAGCAAAGGAAACTTTGCAGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTTTTTCCAGTTCACGATaGCAGTCTACCAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTFSSSR*QSTNFL
Trigger: AAGGAAATTGGTAGACTGTCATCGTGAACTGGAAAA...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACGTGTTGTTGTATaGTGGTTTAACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: IIVTSVRHTLALSSSGIIVRVVV*WFNCSI
Trigger: GATGGAGCAGTTAAACCATCATACAACAACACGTAC...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCAGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAAVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR TCA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WSCISLRFNSILLETVSNVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACTTTTTAGATGTTaGATCTGTTCCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: IIVTSVRHTLALSSSGIIVLFRC*ICSCWS
Trigger: GGACCAGCAGGAACAGATTCAACATCTAAAAAGTAC...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp CCAGAGAGAGAGGTCACTGGATTTATAAAGTTAAAAGCAGAGCCAAACATACATACAATCTCTGAGCACTaGTCGATGTTCTTTTTAATC +
Preference number: 4 (lower is better)
Translates to: PEREVTGFIKLKAEPNIHTISEH*SMFFLI
Trigger: GATTAAAAAGAACATCGATCAGTGCTCAGAGATTGT...ATGTATGTTTGGCTCTGCTTTTAACTTTATAAATCCAGTGACCTCTCTCTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTCACACCATAGATCTTTaGACAGCTATAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CWSCISLRFNSILLETVSHTIDL*TAISSP
Trigger: TGGAGAACTTATAGCTGTGCAAAGATCTATGGTGTG...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR GCA 90 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTTGTTATTCTTTGCTGCATTCTCGGTCAATTTCTaGACACTTAGAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: FCFTAYIDRVLPLLFFAAFSVNF*TLRAQT
Trigger: AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAA...TGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR GCA 90 bp CGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCCTGTTTTTCTCAGCCTTaGTTAACTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RCMSLLTFCSLFLNSGISCFSQP*LTHVQL
Trigger: AAGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACA...GGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCATGTTTTTCTCAGCCTTaGTTAACTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSCFSQP*LTHVQL
Trigger: AAGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACA...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR GCA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTCCTTCAAATCAATTATaGTTTGCCTCATGGGCACAA +
Preference number: 4 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVPSNQL*FASWAQ
Trigger: TTGTGCCCATGAGGCAAAGCATAATTGATTTGAAGG...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAATTTGAAGATGTTAACTaGGCTTCCTTACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQFEDVN*ASLLVI
Trigger: GATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 4 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSSLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAAGACTGAACTTCAGTaGATAATTCCACAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTKTELQ*IIPQSA
Trigger: AGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCAAGCATCCCGAAATTGTaGTTCTCGAAGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSSIPKL*FSKFFL
Trigger: AAGAAAGAACTTCGAGAACCACAATTTCGGGATGCT...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR CCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGATACAAAAATTAGCCTaGTGTGGTGGTACATGCCTG +
Preference number: 4 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKIQKLA*CGGTCL
Trigger: CAGGCATGTACCACCACACCAGGCTAATTTTTGTAT...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CCA 90 bp GTCTACAAATTTTCAAGGGACAAGAGGCCTAAATTACTATCCGTTACCATTTTAGTACAATCTTCAATTTaGCAAGTCTGTCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VYKFSRDKRPKLLSVTILVQSSI*QVCPWS
Trigger: AGACCAGGGACAGACTTGCCAAATTGAAGATTGTAC...TAAAATGGTAACGGATAGTAATTTAGGCCTCTTGTCCCTTGAAAATTTGTAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CCA 90 bp ACTGAAGCAAGAACAAGTATCAAATTTATGGTGAAGTGTGGGTGGAAGAATGGTAACTTCCTCAATAAGTaGGATCAAGTTCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: TEARTSIKFMVKCGWKNGNFLNK*DQVPKA
Trigger: TGCTTTAGGAACTTGATCCCACTTATTGAGGAAGTT...ACCATTCTTCCACCCACACTTCACCATAAATTTGATACTTGTTCTTGCTTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CCA 90 bp AGGTCTACAAATTTTCAAGGGACAAGAGGCCTAAATTACTATCCGTTACCATTTATGGTGAAGTGTGGGTaGAAGAATGGTGAAATCATT +
Preference number: 4 (lower is better)
Translates to: RSTNFQGTRGLNYYPLPFMVKCG*KNGEII
Trigger: AATGATTTCACCATTCTTCCACCCACACTTCACCAT...AAATGGTAACGGATAGTAATTTAGGCCTCTTGTCCCTTGAAAATTTGTAGACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434288.1
3UTR CAA 72 bp AGGTCCTTAGCTTTAATCACATCTGCAAAGTTTCCTTaGCTGTATAAAGTAACAGTCACGGGTTCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: RSLALITSAKFP*LYKVTVTGSRN
Trigger: ATTTCTAGAACCCGTGACTGTTACTTTATACAGCAAAGGAAACTTTGCAGATGTGATTAAAGCTAAGGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR TCA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTGTCTTTTTGCTTTTCTaGGTACACACCATAGATCTT +
Preference number: 4 (lower is better)
Translates to: CWSCISLRFNSILLETVSVFLLF*VHTIDL
Trigger: AAGATCTATGGTGTGTACTCAGAAAAGCAAAAAGAC...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTAAACCCCAAGAGAACTaGTCATTTCTCGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSKPQEN*SFLGQF
Trigger: AAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTT...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp ATACATTTTCATCGGCATCAGACCGTATTTCTATGTATTCAATATCTTGTCCACTTTTCCAGTTCACGATaGCAGTCTACCAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: IHFHRHQTVFLCIQYLVHFSSSR*QSTNFL
Trigger: AAGGAAATTGGTAGACTGTCATCGTGAACTGGAAAA...GTGGACAAGATATTGAATACATAGAAATACGGTCTGATGCCGATGAAAATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR TCA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTTCAACAAGCAGTTCTaGTTTTTCCTGATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIFNKQF*FFLIEK
Trigger: CTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAA...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGCCTTTTATCAGAAGCTaGTACATTTTCATCGGCATC +
Preference number: 4 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKPFIRS*YIFIGI
Trigger: GATGCCGATGAAAATGTATCAGCTTCTGATAAAAGG...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTATCTCATCAAACTTTTaGTTCAAAGCCTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: MSFFRRCMSLLTFCSLFLISSNF*FKAFPS
Trigger: TGAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGAT...AAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTGAAGATCCTTCCAACTaGTGTAATTCATACTTCACA +
Preference number: 4 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIEDPSN*CNSYFT
Trigger: TGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTC...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR GCA 90 bp AACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCCTTAGCTGCTTGTTGTaGAATTTTTCTTTCAACATC +
Preference number: 4 (lower is better)
Translates to: NFSNVVSKGLTCSLASFILSCLL*NFSFNI
Trigger: GATGTTGAAAGAAAAATTGCACAACAAGCAGCTAAG...GATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR GCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGACTGTGTCTAACTTGTaGTGTTTCTCTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKTVSNL*CFSCFS
Trigger: GGAGAAACAAGAGAAACAGCACAAGTTAGACACAGT...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CCA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGTTTGAAGATGTTAACTaGGCTTCCTTACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLFEDVN*ASLLVI
Trigger: GATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTTGAAGATGTTAACTaGGCTTCCTTACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTFEDVN*ASLLVI
Trigger: GATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGTCTTTTTGCTTTTCTaGGTACACACCATAGATCTT +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSVFLLF*VHTIDL
Trigger: AAGATCTATGGTGTGTACTCAGAAAAGCAAAAAGAC...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTTTCAACAAGCAGTTCTaGTTTTTCCTGATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSFNKQF*FFLIEK
Trigger: CTTCTCAATCAGGAAAAATCAGAACTGCTTGTTGAA...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR TCA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACTGTGTTGCCAAAGACTaGATTAATGAATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: WSCISLRFNSILLETVSNCVAKD*INESLA
Trigger: AGCTAGAGATTCATTAATTCAGTCTTTGGCAACACA...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACTTTCTTGAGCAACCTTaGGATCGTGTACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: WSCISLRFNSILLETVSNFLEQP*DRVQMY
Trigger: ATACATTTGTACACGATCCCAAGGTTGCTCAAGAAA...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTTTTCTTGAGCAACCTTaGGATCGTGTACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSFLEQP*DRVQMY
Trigger: ATACATTTGTACACGATCCCAAGGTTGCTCAAGAAA...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTTTGAAGATGTTAACTaGGCTTCCTTACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIFEDVN*ASLLVI
Trigger: GATTACAAGTAAGGAAGCCCAGTTAACATCTTCAAA...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
3UTR CAA 72 bp TTTTGTTTCACTGCCTATATTGATCGTGTATTGCCTTaGTTATTCTTTGCTGCAACAACTAGCACTTTCATT +
Preference number: 4 (lower is better)
Translates to: FCFTAYIDRVLP*LFFAATTSTFI
Trigger: AATGAAAGTGCTAGTTGTTGCAGCAAAGAATAACAAAGGCAATACACGATCAATATAGGCAGTGAAACAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR GCA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACATCTCATCAAACTTTTaGTTCAAAGCCTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: WSCISLRFNSILLETVSNISSNF*FKAFPS
Trigger: TGAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGAT...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CCA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGTCTTTAAGTTCCATCTaGAACCTCTCCATAATTGTA +
Preference number: 4 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKSLSSI*NLSIIV
Trigger: TACAATTATGGAGAGGTTCCAGATGGAACTTAAAGA...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS GCA 90 bp GCGACCCCGCAACCGCGCACTCACAGCTTCCTGCCTCGGCCGCCCTaGGGATCACGTGGGCCTCTAGGCCCGCACGCGTCCACGCCGCTC +
Preference number: 5 (lower is better)
Translates to: ATPQPRTHSFLPRPP*GSRGPLGPHASTPL
Trigger: GAGCGGCGTGGACGCGTGCGGGCCTAGAGGCCCACGTGATCCGCAGGGCGGCCGAGGCAGGAAGCTGTGAGTGCGCGGTTGCGGGGTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS TCA 90 bp ACGTTTCTAATCTCACCAGGGACCTGGAGCCCACAAAGGCTTAACTaGGGCCGAAGCAAGGCGTGCACGGGACGTGAGACCCGCGAATCT +
Preference number: 5 (lower is better)
Translates to: TFLISPGTWSPQRLN*GRSKACTGRETRES
Trigger: AGATTCGCGGGTCTCACGTCCCGTGCACGCCTTGCTTCGGCCTCAGTTAAGCCTTTGTGGGCTCCAGGTCCCTGGTGAGATTAGAAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378823.8
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
ENST00000652485.1
CDS-3UTR CAA 90 bp CTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCTTCTTCCAGGTCTGGTaGGACCCTACAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHRIDAEECYRLLHDGQIFFQVW*DPTGSR
Trigger: CCTGCTCCCTGTAGGGTCCAACCAGACCTGGAAGAA...GATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCCAGCTCACTGCAGCCTaGAACCCTCAGACTCCAGGG +
Preference number: 5 (lower is better)
Translates to: HRTEYLLTGGNKKGLREAQLTAA*NPQTPG
Trigger: CCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTG...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAGTCTTTCCCGCCCCATaGGGTCCAACCAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: SQLTAALNPQTPGILSQPVFPAP*GPTKIV
Trigger: TACAATTTTGGTTGGACCCAATGGGGCGGGAAAGAC...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AGCAGCAATGAGAAGCCAGAAAGGCACCTATCCCACCTCCAAACCCATGGGCTTGCAATGATGCCACAGTaGAGGCAGAACGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SSNEKPERHLSHLQTHGLAMMPQ*RQNVSA
Trigger: GGCTGAAACGTTCTGCCTCAACTGTGGCATCATTGC...AAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTTTCTGGCTTCTCATTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGGTGAGTGAGCCTGGCTaGCCTTCCACATGGCAATGC +
Preference number: 5 (lower is better)
Translates to: GIRIDGEASMLHRIDAEEVSEPG*PSTWQC
Trigger: GCATTGCCATGTGGAAGGCAAGCCAGGCTCACTCAC...CTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp ACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAAGGTATTCTTCCAGGTCTGGTaGGACCCTACAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TEYLLTGGNKKGLREAKVFFQVW*DPTGSR
Trigger: CCTGCTCCCTGTAGGGTCCAACCAGACCTGGAAGAA...TACCTTGGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCGATTGTCGGGACAGTTaGAGTACAATGCAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: QDRRRGVLQASSRWADQADCRDS*STMQWR
Trigger: CCTCCACTGCATTGTACTCAAACTGTCCCGACAATC...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCGTTGGTTGGCAGTTTTaGCTTCCCCTTCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: QDRRRGVLQASSRWADQAVGWQF*LPLLVS
Trigger: AGAGACAAGAAGGGGAAGCAAAAACTGCCAACCAAC...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGCCCTCGGTCAAGATTTGTaGTTGGCTCATCCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: QDRRRGVLQASSRWADQALGQDL*LAHPRQ
Trigger: TTGCCTTGGATGAGCCAACAACAAATCTTGACCGAG...GGCCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CAA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGAGAAGAAGCATGCATTaGCACTGGGGAGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLRRSMH*HWGGRH
Trigger: GTGCCTCCCTCCCCAGTGCAAATGCATGCTTCTTCT...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CATGGGCCTGCTCCCAGAAAAATGTACACAGAATTCTGCCTGGTTTCTGGGGGTAGCTCGGATATGTTCTaGATGGCGATCTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: HGPAPRKMYTEFCLVSGGSSDMF*MAICLQ
Trigger: CTGCAAGCAGATCGCCATCAAGAACATATCCGAGCT...ACCCCCAGAAACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CAA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCATCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 5 (lower is better)
Translates to: SQLTAALNPQTPGILSQPSCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp ACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAAAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: TGFFTMGRSGLKWSELSKSLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...TTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAAGTGGGGTCAAAGAATaGCTGGGGTTGAGGACCACA +
Preference number: 5 (lower is better)
Translates to: YATQDRRRGVLQASSRWASGVKE*LGLRTT
Trigger: TGTGGTCCTCAACCCCAGCAATTCTTTGACCCCACT...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS CCA 90 bp TGGGCCTGCTCCCAGAAAAATGTACACAGAATTCTGCCTGGTTTCTaGGGGTTCATGGTCTTTGATCCCAGGTTAAGCCTCAGCAAGATG +
Preference number: 5 (lower is better)
Translates to: WACSQKNVHRILPGF*GFMVFDPRLSLSKM
Trigger: CATCTTGCTGAGGCTTAACCTGGGATCAAAGACCATGAACCCCCAGAAACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651658.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGTTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp GAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACAGCTCGGATATGTTCTaGATGGCGATCTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: EASMLHRIDAEECYRLLHSSDMF*MAICLQ
Trigger: CTGCAAGCAGATCGCCATCAAGAACATATCCGAGCT...GTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AGAGGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGCAATGATGCCACAGTaGAGGCAGAACGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RGIRIDGEASMLHRIDAEAMMPQ*RQNVSA
Trigger: GGCTGAAACGTTCTGCCTCAACTGTGGCATCATTGC...CTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CAA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCTTTCTCGGTCAAGATTaGTTGTTGGCTCATCCAAGG +
Preference number: 5 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGFLGQD*LLAHPR
Trigger: CCTTGGATGAGCCAACAACAAATCTTGACCGAGAAA...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGGTCTTTCCCGCCCCATaGGGTCCAACCAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: QINYALPHGHKSQHFITPVFPAP*GPTKIV
Trigger: TACAATTTTGGTTGGACCCAATGGGGCGGGAAAGAC...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTTCTCACATCTGTTTCTaGAGCAACCTTGGGATCGTG +
Preference number: 5 (lower is better)
Translates to: GEASMLHRIDAEECYRLLSHICF*SNLGIV
Trigger: CACGATCCCAAGGTTGCTCAAGAAACAGATGTGAGA...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CATGGGCCTGCTCCCAGAAAAATGTACACAGAATTCTGCCTGGTTTCTGGGGGTTTATTTAGCACAGCCTaGGAAACCCCAAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: HGPAPRKMYTEFCLVSGGLFSTA*ETPREL
Trigger: CAGTTCTCTTGGGGTTTCCAAGGCTGTGCTAAATAA...ACCCCCAGAAACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CAA 90 bp AAGACTGAACTTCAGTGGATAATTCCACAGTCTGCTCCTCCAGTTGCTGACGACAGCTCGGATATGTTCTaGATGGCGATCTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KTELQWIIPQSAPPVADDSSDMF*MAICLQ
Trigger: CTGCAAGCAGATCGCCATCAAGAACATATCCGAGCT...GTCGTCAGCAACTGGAGGAGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGCTGTTTTTCTCAGCCTaGCTTAACTCACGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQLFFSA*LNSRSA
Trigger: AGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACAG...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AGTAATGAACTGGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTCTGTTTTTCTCAGCCTaGCTTAACTCACGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: SNELGVNCCGSSQHGSLFLFFSA*LNSRSA
Trigger: AGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACAG...AAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCCAGTTCATTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCAGTTCCTTGTTCAATTaGGCAAGTCTGTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: HRTEYLLTGGNKKGLREASSLFN*ASLSLV
Trigger: GACCAGGGACAGACTTGCCAAATTGAACAAGGAACT...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp ATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGCTTGTGCTGTTTCTCTaGTTTCTCCTGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: MLHRIDAEECYRLLHDGQLVLFL*FLLVDL
Trigger: CAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAG...CTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLSLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATGGTTCCTGTCAAACTTaGAGACCCCATTCAACTACT +
Preference number: 5 (lower is better)
Translates to: ATQDRRRGVLQASSRWADGSCQT*RPHSTT
Trigger: AGTAGTTGAATGGGGTCTCAAAGTTTGACAGGAACC...ATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGAAGCGTGTGACTTGGTaGCATTCTGTGTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: SMLHRIDAEECYRLLHDGKRVTW*HSVWNG
Trigger: TCCATTCCACACAGAATGCAACCAAGTCACACGCTT...CCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TCACAGCTCACTGCAGCCTTGAACCCTCAGACTCCAGGGATCCTATCTCAGCCAGTTTCACTGCCTATATaGATCGTGTATTGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SQLTAALNPQTPGILSQPVSLPI*IVYCLC
Trigger: ACAAAGGCAATACACGATCAATATAGGCAGTGAAAC...TGGCTGAGATAGGATCCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACGGGGAAGGGGGATATTaGGAGACTGATCTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RIDGEASMLHRIDAEECYGEGGY*ETDLEA
Trigger: TGCTTCTAGATCAGTCTCCAAATATCCCCCTTCCCC...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCACATATGATTGTCGGGACAGTTaGAGTACAATGCAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LLGMKAATLRSAAKDATYDCRDS*STMQWR
Trigger: CCTCCACTGCATTGTACTCAAACTGTCCCGACAATC...ATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCGATCCGGGACATGTTaGCAAACGTTTCTAATCTCA +
Preference number: 5 (lower is better)
Translates to: GEASMLHRIDAEECYRLLRSGTC*QTFLIS
Trigger: TGAGATTAGAAACGTTTGCAAACATGTCCCGGATCG...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTCGATCCGGGACATGTTaGCAAACGTTTCTAATCTCA +
Preference number: 5 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFRSGTC*QTFLIS
Trigger: TGAGATTAGAAACGTTTGCAAACATGTCCCGGATCG...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp AAGACTGAACTTCAGTGGATAATTCCACAGTCTGCTCCTCCAGTTGCTGACGACTCTCACATCTGTTTCTaGAGCAACCTTGGGATCGTG +
Preference number: 5 (lower is better)
Translates to: KTELQWIIPQSAPPVADDSHICF*SNLGIV
Trigger: CACGATCCCAAGGTTGCTCAAGAAACAGATGTGAGA...GTCGTCAGCAACTGGAGGAGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTTTATTTAGCACAGCCTaGGAAACCCCAAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: GEASMLHRIDAEECYRLLLFSTA*ETPREL
Trigger: CAGTTCTCTTGGGGTTTCCAAGGCTGTGCTAAATAA...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTTTATTTAGCACAGCCTaGGAAACCCCAAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFLFSTA*ETPREL
Trigger: CAGTTCTCTTGGGGTTTCCAAGGCTGTGCTAAATAA...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp CTGGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCAGCTCGGATATGTTCTaGATGGCGATCTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LATTNIKQLVFVTGQLLFSSDMF*MAICLQ
Trigger: CTGCAAGCAGATCGCCATCAAGAACATATCCGAGCT...GAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp AGCAGCAATGAGAAGCCAGAAAGGCACCTATCCCACCTCCAAACCCATGGGCTTTTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCT +
Preference number: 5 (lower is better)
Translates to: SSNEKPERHLSHLQTHGLFGYVL*YDGLTA
Trigger: AGCAGTTAAACCATCATACAACAACACGTACCCAAA...AAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTTTCTGGCTTCTCATTGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAAGGTCAGCATCTCCATTaGGGTACGTGTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKGQHLH*GTCCCM
Trigger: CATACAACAACACGTACCCAAATGGAGATGCTGACC...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCGGTCAGCATCTCCATTaGGGTACGTGTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRGQHLH*GTCCCM
Trigger: CATACAACAACACGTACCCAAATGGAGATGCTGACC...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp CAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGTCATCTTTGTCAGCTTaGTCTTTGGTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: QYATQDRRRGVLQASSRWSSLSA*SLVSIS
Trigger: GGAGATGCTGACCAAAGACAAAGCTGACAAAGATGA...CCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCAGATCAGGGCATGGCTCGCTGTTTaGATGATTTTTCAATTTCCT +
Preference number: 5 (lower is better)
Translates to: HRIDAEECYRLLHDGQIRAWLAV*MIFQFP
Trigger: AGGAAATTGAAAAATCATCAAAACAGCGAGCCATGC...CCTGATCTGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: GEASMLHRIDAEECYRLLQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFSLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGCTCAGCATCCCGAAATaGTGGTTCTCGAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: GIRIDGEASMLHRIDAEELSIPK*WFSKFF
Trigger: AAAGAACTTCGAGAACCACAATTTCGGGATGCTGAG...CTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp ATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTCTCGGTCAAGATTTGTaGTTGGCTCATCCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: IRIDGEASMLHRIDAEECLGQDL*LAHPRQ
Trigger: TTGCCTTGGATGAGCCAACAACAAATCTTGACCGAG...ACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CAA 90 bp TGTCTTTCACTGAATGGTCCACGCTCAAAGCCATCCAATTCTAGCTGTGTTGCCCTCGGTCAAGATTTGTaGTTGGCTCATCCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: CLSLNGPRSKPSNSSCVALGQDL*LAHPRQ
Trigger: TTGCCTTGGATGAGCCAACAACAAATCTTGACCGAG...GGCAACACAGCTAGAATTGGATGGCTTTGAGCGTGGACCATTCAGTGAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR CAA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCTTTCTCGGTCAAGATTaGTTGTTGGCTCATCCAAGG +
Preference number: 5 (lower is better)
Translates to: HRTEYLLTGGNKKGLREAFLGQD*LLAHPR
Trigger: CCTTGGATGAGCCAACAACAAATCTTGACCGAGAAA...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp AGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGTTTCTCGGTCAAGATTaGTTGTTGGCTCATCCAAGG +
Preference number: 5 (lower is better)
Translates to: SMLHRIDAEECYRLLHDGFLGQD*LLAHPR
Trigger: CCTTGGATGAGCCAACAACAAATCTTGACCGAGAAA...CCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CAA 90 bp ATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTAGAGAGGAATCAGGATaGATGGTGAAGCCAGTATGC +
Preference number: 5 (lower is better)
Translates to: IRIDGEASMLHRIDAEECREESG*MVKPVC
Trigger: GCATACTGGCTTCACCATCAATCCTGATTCCTCTCT...ACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGAAGCGTGTGACTTGGTaGCATTCTGTGTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: IDGEASMLHRIDAEECYRKRVTW*HSVWNG
Trigger: TCCATTCCACACAGAATGCAACCAAGTCACACGCTT...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTTCAAAAGCGTGTGACTaGGTTGCATTCTGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: GEASMLHRIDAEECYRLLSKACD*VAFCVE
Trigger: TTCCACACAGAATGCAACCAAGTCACACGCTTTTGA...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTAAAGAATTGCTGGGGTaGAGGACCACAGGAAAATTG +
Preference number: 5 (lower is better)
Translates to: GEASMLHRIDAEECYRLLKELLG*RTTGKL
Trigger: CAATTTTCCTGTGGTCCTCAACCCCAGCAATTCTTT...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TGGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATAAAGAATTGCTGGGGTaGAGGACCACAGGAAAATTG +
Preference number: 5 (lower is better)
Translates to: WVCTVENFLSVERALSLDKELLG*RTTGKL
Trigger: CAATTTTCCTGTGGTCCTCAACCCCAGCAATTCTTT...ATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCCATAGAATCAATGGATaGAAATCTCAGTGGGGTCAA +
Preference number: 5 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGHRING*KSQWGQ
Trigger: TTGACCCCACTGAGATTTCAATCCATTGATTCTATG...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CCAGAGAGAGAGGTCACTGGATTTATAAAGTTAAAAGCAGAGCCAAACATACATCAGCTCACTGCAGCCTaGAACCCTCAGACTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PEREVTGFIKLKAEPNIHQLTAA*NPQTPG
Trigger: CCCTGGAGTCTGAGGGTTCAAGGCTGCAGTGAGCTG...ATGTATGTTTGGCTCTGCTTTTAACTTTATAAATCCAGTGACCTCTCTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTGTTCCTTGTTTGTCTTaGGTCAGCATCTCCATTTGG +
Preference number: 5 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFVPCLS*VSISIW
Trigger: CCAAATGGAGATGCTGACCAAAGACAAACAAGGAAC...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423956.5
CDS-3UTR CAA 90 bp CTGCTCCCAGAAAAATGTACACAGAATTCTGCCTGGTTTCTGGGGGTTCATGGTGCCTCAGCAAGATGCTaGCTAGGATTCAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: LLPEKCTQNSAWFLGVHGASARC*LGFNLA
Trigger: TGCCAAATTGAATCCTAGCAAGCATCTTGCTGAGGC...ACCATGAACCCCCAGAAACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CAA 90 bp AGTAATGAACTGGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTGCTATAAGTTCTCCATaGACATCACGAAATTGCAGA +
Preference number: 5 (lower is better)
Translates to: SNELGVNCCGSSQHGSLFAISSP*TSRNCR
Trigger: TCTGCAATTTCGTGATGTCAATGGAGAACTTATAGC...AAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCCAGTTCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp ATATCCTATGATCCTAGGAACTGCCAGTGTGCTCCTGCCAACTTTCAGCTGCTGACACACCATAGATCTTaGCACAGCTATAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ISYDPRNCQCAPANFQLLTHHRS*HSYKFS
Trigger: GGAGAACTTATAGCTGTGCAAAGATCTATGGTGTGT...CAGCAGCTGAAAGTTGGCAGGAGCACACTGGCAGTTCCTAGGATCATAGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCAATCTCATCAAACTTTaGCTTCAAAGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGNLIKL*LQSLSF
Trigger: GAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGATT...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCCTGTTTTTCTCAGCCTaGCTTAACTCACGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRLFFSA*LNSRSA
Trigger: AGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACAG...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AAGACTGAACTTCAGTGGATAATTCCACAGTCTGCTCCTCCAGTTGCTGACGACCTGTTTTTCTCAGCCTaGCTTAACTCACGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: KTELQWIIPQSAPPVADDLFFSA*LNSRSA
Trigger: AGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACAG...GTCGTCAGCAACTGGAGGAGCAGACTGTGGAATTATCCACTGAAGTTCAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGTAATGAACTGGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: SNELGVNCCGSSQHGSLFTQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...AAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCCAGTTCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp GATTTGAGCCCAGGCAGTCTGGCTCATTCTAACCTCCATCCATGCTGTGATGGCTATGTATTCAATATCTaGTCCACGATAGGTACTTCG +
Preference number: 5 (lower is better)
Translates to: DLSPGSLAHSNLHPCCDGYVFNI*STIGTS
Trigger: CGAAGTACCTATCGTGGACAAGATATTGAATACATA...GCCATCACAGCATGGATGGAGGTTAGAATGAGCCAGACTGCCTGGGCTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CAGGTCTCTTGCCCCTTAGGTGGGATAATTCTGAGGTATATATTTTGCCAAACTGCAATGATGCCACAGTaGAGGCAGAACGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: QVSCPLGGIILRYIFCQTAMMPQ*RQNVSA
Trigger: GGCTGAAACGTTCTGCCTCAACTGTGGCATCATTGC...AGTTTGGCAAAATATATACCTCAGAATTATCCCACCTAAGGGGCAAGAGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAATCAAAAGCGTGTGACTaGGTTGCATTCTGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKSKACD*VAFCVE
Trigger: TTCCACACAGAATGCAACCAAGTCACACGCTTTTGA...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp AGCAGCAATGAGAAGCCAGAAAGGCACCTATCCCACCTCCAAACCCATGGGCTTTCTGCAAAGTTTCCTTaGCTGTATAAAGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: SSNEKPERHLSHLQTHGLSAKFP*LYKVTV
Trigger: GACTGTTACTTTATACAGCAAAGGAAACTTTGCAGA...AAGCCCATGGGTTTGGAGGTGGGATAGGTGCCTTTCTGGCTTCTCATTGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp ACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAATGCAAAACTGTGAGTTaGCTAAAGCTAGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: TGFFTMGRSGLKWSELSKCKTVS*LKLGDV
Trigger: AACATCTCCTAGCTTTAGCAAACTCACAGTTTTGCA...TTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp ACAGGCTTCTTCACGATGGGCAGATCAGGCCTCAAGTGGTCAGAGCTTTCCAAACATAGAATCAATGGATaGAAATCTCAGTGGGGTCAA +
Preference number: 5 (lower is better)
Translates to: TGFFTMGRSGLKWSELSKHRING*KSQWGQ
Trigger: TTGACCCCACTGAGATTTCAATCCATTGATTCTATG...TTTGGAAAGCTCTGACCACTTGAGGCCTGATCTGCCCATCGTGAAGAAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS TCA 90 bp CACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATaGCCATTCAACCAGAGCATGTGCAAGAGATTCAATGTTTTCTCG +
Preference number: 5 (lower is better)
Translates to: HSGEFPLCRESSESG*PFNQSMCKRFNVFS
Trigger: CGAGAAAACATTGAATCTCTTGCACATGCTCTGGTTGAATGGTCATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455677.1
CDS-3UTR CAA 90 bp GGGAGTAAACTGCTGTGGCTCCAGCCAGCATGGCTCGCTGTTTTGATGATTTTTACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: GSKLLWLQPAWLAVLMIFTNVFP*VPGGKS
Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...AAAAATCATCAAAACAGCGAGCCATGCTGGCTGGAGCCACAGCAGTTTACTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCTCTCACATCTGTTTCTaGAGCAACCTTGGGATCGTG +
Preference number: 5 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCSHICF*SNLGIV
Trigger: CACGATCCCAAGGTTGCTCAAGAAACAGATGTGAGA...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTATTGACATCACGAAATaGCAGACGAATCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFIDITK*QTNLGS
Trigger: AGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAAT...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGCTATAAGTTCTCCATaGACATCACGAAATTGCAGA +
Preference number: 5 (lower is better)
Translates to: ASMLHRIDAEECYRLLHDAISSP*TSRNCR
Trigger: TCTGCAATTTCGTGATGTCAATGGAGAACTTATAGC...ATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CTGGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCTTATTTAGCACAGCCTaGGAAACCCCAAGAGAACTG +
Preference number: 5 (lower is better)
Translates to: LATTNIKQLVFVTGQLLFLFSTA*ETPREL
Trigger: CAGTTCTCTTGGGGTTTCCAAGGCTGTGCTAAATAA...GAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp CATGGGCCTGCTCCCAGAAAAATGTACACAGAATTCTGCCTGGTTTCTGGGGGTAATCTCATCAAACTTTaGCTTCAAAGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: HGPAPRKMYTEFCLVSGGNLIKL*LQSLSF
Trigger: GAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGATT...ACCCCCAGAAACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CAA 90 bp AGCTATAAGTTCTCCATTGACATCACGAAATTGCAGACGAATCTGGGCTCTCACTTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: SYKFSIDITKLQTNLGSHFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...GTGAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAATGGAGAACTTATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651723.1
CDS-3UTR CAA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCCCATTTGGGTACGTGTaGTTGTATGATGGTTTAACT +
Preference number: 5 (lower is better)
Translates to: HRTEYLLTGGNKKGLREAPFGYV*LYDGLT
Trigger: AGTTAAACCATCATACAACAACACGTACCCAAATGG...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp ACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTAGAGCTCAGAGGTCAGCATCTCCATTaGGGTACGTGTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: TPRELIISRSISAHLELRGQHLH*GTCCCM
Trigger: CATACAACAACACGTACCCAAATGGAGATGCTGACC...TCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTCATCTTTGTCAGCTTaGTCTTTGGTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFSSLSA*SLVSIS
Trigger: GGAGATGCTGACCAAAGACAAAGCTGACAAAGATGA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATCTGATTTGTTCATCTTaGTCAGCTTTGTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: WVCTVENFLSVERALSLDLICSS*SALSLV
Trigger: GACCAAAGACAAAGCTGACAAAGATGAACAAATCAG...ATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAGTTCCTTGTTCAATTaGGCAAGTCTGTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCSSLFN*ASLSLV
Trigger: GACCAGGGACAGACTTGCCAAATTGAACAAGGAACT...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp GATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: DGEASMLHRIDAEECYRLSDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...AAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 5 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFSCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: SMLHRIDAEECYRLLHDGETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...CCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CTCCATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATGCAATGATGCCACAGTaGAGGCAGAACGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LHNCNICQAYFGTFFFRHAMMPQ*RQNVSA
Trigger: GGCTGAAACGTTCTGCCTCAACTGTGGCATCATTGC...ATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR CAA 90 bp AAAGAGGTGCAGACTCTGAGTACTAAAACCTGTGACATTGAGGGGCCAGGGAAACTTCTCAACAGTGCTTaGAGAAGAAGCATGCATTTG +
Preference number: 5 (lower is better)
Translates to: KEVQTLSTKTCDIEGPGKLLNSA*RRSMHL
Trigger: CAAATGCATGCTTCTTCTCAAAGCACTGTTGAGAAG...TTTCCCTGGCCCCTCAATGTCACAGGTTTTAGTACTCAGAGTCTGCACCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp TATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATGGGCATGCCTTTGTTATTCTTaGCTGCAACAACTAGCACTT +
Preference number: 5 (lower is better)
Translates to: YATQDRRRGVLQASSRWACLCYS*LQQLAL
Trigger: AAGTGCTAGTTGTTGCAGCAAAGAATAACAAAGGCA...TGCCCATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp AGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGAGATCGTGTATTGCCTTaGTTATTCTTTGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: SQYATQDRRRGVLQASSRDRVLP*LFFAAT
Trigger: TGTTGCAGCAAAGAATAACAAAGGCAATACACGATC...TCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACGATCTTAAAACTGAGATTTaGGAGGGGTGCAGTTATTGT +
Preference number: 5 (lower is better)
Translates to: ASMLHRIDAEECYRLLHDLKTEI*EGCSYC
Trigger: ACAATAACTGCACCCCTCCAAAATCTCAGTTTTAAG...ATCGTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGTCTTTCCCGCCCCATaGGGTCCAACCAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQVFPAP*GPTKIV
Trigger: TACAATTTTGGTTGGACCCAATGGGGCGGGAAAGAC...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTTGTGTCTTTCCCGCCCCATaGGGTCCAACCAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: TCWTVRSKSIPCSLAACCVFPAP*GPTKIV
Trigger: TACAATTTTGGTTGGACCCAATGGGGCGGGAAAGAC...ACAACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTGTCTTTCCCGCCCCATaGGGTCCAACCAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSVFPAP*GPTKIV
Trigger: TACAATTTTGGTTGGACCCAATGGGGCGGGAAAGAC...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: IDGEASMLHRIDAEECYRTNVFP*VPGGKS
Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp TTCCACAGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGGCTATAAGTTCTCCATaGACATCACGAAATTGCAGA +
Preference number: 5 (lower is better)
Translates to: FHSLLLQLLTTLQISGYLAISSP*TSRNCR
Trigger: TCTGCAATTTCGTGATGTCAATGGAGAACTTATAGC...CAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCAAGCTCGGATATGTTCTaGATGGCGATCTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSSSDMF*MAICLQ
Trigger: CTGCAAGCAGATCGCCATCAAGAACATATCCGAGCT...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTGTTGGTTGGCAGTTTTaGCTTCCCCTTCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAAVGWQF*LPLLVS
Trigger: AGAGACAAGAAGGGGAAGCAAAAACTGCCAACCAAC...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCACTTTAAGGTTTCTACATaGCTGTTTTTCTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: EASMLHRIDAEECYRLLHFKVST*LFFSAL
Trigger: CAAGGCTGAGAAAAACAGCAATGTAGAAACCTTAAA...GTGAAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCCCATTTGGGTACGTGTaGTTGTATGATGGTTTAACT +
Preference number: 5 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRPFGYV*LYDGLT
Trigger: AGTTAAACCATCATACAACAACACGTACCCAAATGG...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGTCTTTCACTGAATGGTCCACGCTCAAAGCCATCCAATTCTAGCTGTGTTGCCCTGATTTGTTCATCTTaGTCAGCTTTGTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: CLSLNGPRSKPSNSSCVALICSS*SALSLV
Trigger: GACCAAAGACAAAGCTGACAAAGATGAACAAATCAG...GGCAACACAGCTAGAATTGGATGGCTTTGAGCGTGGACCATTCAGTGAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp CAAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: QINYALPHGHKSQHFITPSDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...CGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp CTTCTTGGAATGAAAGCAGCCACTCTCAGAAGTGCTGCCAAGGATGCCACATATACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: LLGMKAATLRSAAKDATYTQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...ATATGTGGCATCCTTGGCAGCACTTCTGAGAGTGGCTGCTTTCATTCCAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: NQLCFASWAQVPAFHHAAETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...AGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTCTTCTGTGTATCAATATCTaGTCTCATGAGTCTCATATC +
Preference number: 5 (lower is better)
Translates to: GEASMLHRIDAEECYRLLLCINI*SHESHI
Trigger: GATATGAGACTCATGAGACAAGATATTGATACACAG...AAGAAGCCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CATAGAACTGAGTATCTTCTCACTGGAGGAAACAAAAAGGGGCTGAGGGAGGCCATGTTCACTTTTCATTaGCAAAACCTGCATTTGACC +
Preference number: 5 (lower is better)
Translates to: HRTEYLLTGGNKKGLREAMFTFH*QNLHLT
Trigger: GGTCAAATGCAGGTTTTGCAAATGAAAAGTGAACAT...GGCCTCCCTCAGCCCCTTTTTGTTTCCTCCAGTGAGAAGATACTCAGTTCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp TGGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATTATGTATTCAATATCTaGTCCACGATAGGTACTTCG +
Preference number: 5 (lower is better)
Translates to: WVCTVENFLSVERALSLDYVFNI*STIGTS
Trigger: CGAAGTACCTATCGTGGACAAGATATTGAATACATA...ATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GGAATCAGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTATGTATTCAATATCTaGTCCACGATAGGTACTTCG +
Preference number: 5 (lower is better)
Translates to: GIRIDGEASMLHRIDAEEYVFNI*STIGTS
Trigger: CGAAGTACCTATCGTGGACAAGATATTGAATACATA...CTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCTGATTCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378823.8
ENST00000455677.1
ENST00000651249.1
CDS-3UTR CAA 90 bp TGGAAGGATTCAAGATGTCAGCTGGCAATTCCAGGAAAAACTGTGATTAGGCTTCTCGGTCAAGATTTGTaGTTGGCTCATCCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: WKDSRCQLAIPGKTVIRLLGQDL*LAHPRQ
Trigger: TTGCCTTGGATGAGCCAACAACAAATCTTGACCGAG...AAGCCTAATCACAGTTTTTCCTGGAATTGCCAGCTGACATCTTGAATCCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGGTGAGTGAGCCTGGCTaGCCTTCCACATGGCAATGC +
Preference number: 5 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKVSEPG*PSTWQC
Trigger: GCATTGCCATGTGGAAGGCAAGCCAGGCTCACTCAC...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TGGGTGTGCACAGTGGAGAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATTCTGCAAAGTTTCCTTaGCTGTATAAAGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: WVCTVENFLSVERALSLDSAKFP*LYKVTV
Trigger: GACTGTTACTTTATACAGCAAAGGAAACTTTGCAGA...ATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTCTCCACTGTGCACACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp AGGATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACTGCCTTTGTTATTCTTaGCTGCAACAACTAGCACTT +
Preference number: 5 (lower is better)
Translates to: RIDGEASMLHRIDAEECYCLCYS*LQQLAL
Trigger: AAGTGCTAGTTGTTGCAGCAAAGAATAACAAAGGCA...GTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCAGGGGAAGGGGGATATTaGGAGACTGATCTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSGEGGY*ETDLEA
Trigger: TGCTTCTAGATCAGTCTCCAAATATCCCCCTTCCCC...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp ATTGATGGTGAAGCCAGTATGCTACACAGGATAGACGCAGAGGAGTGTTACAGGCTTAAAACTGAGATTTaGGAGGGGTGCAGTTATTGT +
Preference number: 5 (lower is better)
Translates to: IDGEASMLHRIDAEECYRLKTEI*EGCSYC
Trigger: ACAATAACTGCACCCCTCCAAAATCTCAGTTTTAAG...CCTGTAACACTCCTCTGCGTCTATCCTGTGTAGCATACTGGCTTCACCATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp ACCCCAAGAGAACTGATCATTTCTCGGTCAATTTCTGCACACTTAGAGCTCAGACCATGCCATAGATCTTaGCACAGCTATAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TPRELIISRSISAHLELRPCHRS*HSYKFS
Trigger: GGAGAACTTATAGCTGTGCAAAGATCTATGGCATGG...TCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS TCA 90 bp ATTATGCTTTGCCTGCACTCCAGTAGACTGCCTATATTGGTTGCATaGATAGACAGTTCTCATGATAGTGGTGGCATCAAGGGCATATTC +
Preference number: 5 (lower is better)
Translates to: IMLCLHSSRLPILVA*IDSSHDSGGIKGIF
Trigger: GAATATGCCCTTGATGCCACCACTATCATGAGAACTGTCTATTCATGCAACCAATATAGGCAGTCTACTGGAGTGCAGGCAAAGCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496204.1
CDS-3UTR CAA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCCGATCCGGGACATGTTaGCAAACGTTTCTAATCTCA +
Preference number: 5 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPRSGTC*QTFLIS
Trigger: TGAGATTAGAAACGTTTGCAAACATGTCCCGGATCG...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFTNVFP*VPGGKS
Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTGCTATAAGTTCTCCATaGACATCACGAAATTGCAGA +
Preference number: 5 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFAISSP*TSRNCR
Trigger: TCTGCAATTTCGTGATGTCAATGGAGAACTTATAGC...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTAATCTCATCAAACTTTaGCTTCAAAGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: NQLCFASWAQVPAFHHAANLIKL*LQSLSF
Trigger: GAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGATT...AGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTTTAATCTCATCAAACTTTaGCTTCAAAGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SIMLCLMGTSPSISSRRFNLIKL*LQSLSF
Trigger: GAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGATT...AAAGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCATTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTTGTTTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: TCWTVRSKSIPCSLAACCFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...ACAACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCAGTTGGTTGGCAGTTTTaGCTTCCCCTTCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSVGWQF*LPLLVS
Trigger: AGAGACAAGAAGGGGAAGCAAAAACTGCCAACCAAC...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTTACCGTTGGTTGGCAGTTTTaGCTTCCCCTTCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: KPLGSITRFLNSPSLTVTVGWQF*LPLLVS
Trigger: AGAGACAAGAAGGGGAAGCAAAAACTGCCAACCAAC...GGTAACTGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTTTTAAGGTTTCTACATaGCTGTTTTTCTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: NQLCFASWAQVPAFHHAAFKVST*LFFSAL
Trigger: CAAGGCTGAGAAAAACAGCAATGTAGAAACCTTAAA...AGCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AAATCAATTATGCTTTGCCTCATGGGCACAAGTCCCAGCATTTCATCACGCCGCTTTAAGGTTTCTACATaGCTGTTTTTCTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: KSIMLCLMGTSPSISSRRFKVST*LFFSAL
Trigger: CAAGGCTGAGAAAAACAGCAATGTAGAAACCTTAAA...GCGGCGTGATGAAATGCTGGGACTTGTGCCCATGAGGCAAAGCATAATTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCATCTTTGTCAGCTTaGTCTTTGGTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVSSLSA*SLVSIS
Trigger: GGAGATGCTGACCAAAGACAAAGCTGACAAAGATGA...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACTCATCTTTGTCAGCTTaGTCTTTGGTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: VSKGLTCSLASFISLYKDSSLSA*SLVSIS
Trigger: GGAGATGCTGACCAAAGACAAAGCTGACAAAGATGA...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGCTTGTGCTGTTTCTCTaGTTTCTCCTGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMLVLFL*FLLVDL
Trigger: CAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAG...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGGTTGACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTCTTGTGCTGTTTCTCTaGTTTCTCCTGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: WLTCWTVRSKSIPCSLAALVLFL*FLLVDL
Trigger: CAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAG...AGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTCTTGTGCTGTTTCTCTaGTTTCTCCTGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVLVLFL*FLLVDL
Trigger: CAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAG...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCCTTGTGCTGTTTCTCTaGTTTCTCCTGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPLVLFL*FLLVDL
Trigger: CAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAG...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCCAGTTGCTGACGACGTaGCAAATTAGTGGATATCTG +
Preference number: 5 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPQLLTT*QISGYL
Trigger: CAGATATCCACTAATTTGCAACGTCGTCAGCAACTG...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCCTTTCTCAGTTGCTGACGACGTaGCAAATTAGTGGATATCTG +
Preference number: 5 (lower is better)
Translates to: TTNIKQLVFVTGQLLFLSQLLTT*QISGYL
Trigger: CAGATATCCACTAATTTGCAACGTCGTCAGCAACTG...AGAAAGGAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp CCCAAGAGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTACAGTTGCTGACGACGTaGCAAATTAGTGGATATCTG +
Preference number: 5 (lower is better)
Translates to: PKSVSCSSMSFFRRCMSLQLLTT*QISGYL
Trigger: CAGATATCCACTAATTTGCAACGTCGTCAGCAACTG...TAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACTCTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYSLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR CAA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLSLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAGTCTGCTCCTCCAGTaGCTGACGACGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: MSFFRRCMSLLTFCSLFLSLLLQ*LTTLQI
Trigger: AATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT...AAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCAAGAGAGGAATCAGGATaGATGGTGAAGCCAGTATGC +
Preference number: 5 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSREESG*MVKPVC
Trigger: GCATACTGGCTTCACCATCAATCCTGATTCCTCTCT...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTCCATGCCATAGATCTTaGCACAGCTATAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVPCHRS*HSYKFS
Trigger: GGAGAACTTATAGCTGTGCAAAGATCTATGGCATGG...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAACGATCCGGGACATGTTaGCAAACGTTTCTAATCTCA +
Preference number: 5 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQRSGTC*QTFLIS
Trigger: TGAGATTAGAAACGTTTGCAAACATGTCCCGGATCG...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATCTCACATCTGTTTCTaGAGCAACCTTGGGATCGTG +
Preference number: 5 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTSHICF*SNLGIV
Trigger: CACGATCCCAAGGTTGCTCAAGAAACAGATGTGAGA...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAATTGACATCACGAAATaGCAGACGAATCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQIDITK*QTNLGS
Trigger: AGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAAT...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCACACACCATAGATCTTaGCACAGCTATAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPTHHRS*HSYKFS
Trigger: GGAGAACTTATAGCTGTGCAAAGATCTATGGTGTGT...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGCTGTTTCTCTTGTTTCTCCTGGTTGACTTGTTGGACAGTTCGATCTAAGTCTACACACCATAGATCTTaGCACAGCTATAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CCFSCFSWLTCWTVRSKSTHHRS*HSYKFS
Trigger: GGAGAACTTATAGCTGTGCAAAGATCTATGGTGTGT...AGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGAGAAACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGGTTGGTTGGCAGTTTTaGCTTCCCCTTCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLVGWQF*LPLLVS
Trigger: AGAGACAAGAAGGGGAAGCAAAAACTGCCAACCAAC...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTCAGCCTCTGTCTGAAAAACTCTCTGACAAACGGGGCAACATGACTGGTTTTTTTAAGGTTTCTACATaGCTGTTTTTCTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: TQPLSEKLSDKRGNMTGFFKVST*LFFSAL
Trigger: CAAGGCTGAGAAAAACAGCAATGTAGAAACCTTAAA...AAAACCAGTCATGTTGCCCCGTTTGTCAGAGAGTTTTTCAGACAGAGGCTGAGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGCTCTGATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCTTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCT +
Preference number: 5 (lower is better)
Translates to: SSDSVDLSLSGASRSLDCFGYVL*YDGLTA
Trigger: AGCAGTTAAACCATCATACAACAACACGTACCCAAA...GCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGGGTCAGCATCTCCATTaGGGTACGTGTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLGQHLH*GTCCCM
Trigger: CATACAACAACACGTACCCAAATGGAGATGCTGACC...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATGGTCAGCATCTCCATTaGGGTACGTGTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYGQHLH*GTCCCM
Trigger: CATACAACAACACGTACCCAAATGGAGATGCTGACC...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR CAA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCATCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 5 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSSCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTCTTGTGCTGTTTCTCTaGTTTCTCCTGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSLVLFL*FLLVDL
Trigger: CAAGTCAACCAGGAGAAACAAGAGAAACAGCACAAG...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: GYVLLYDGLTAPSPGQVYETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...GTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATCAGTTGCTGACGACGTaGCAAATTAGTGGATATCTG +
Preference number: 5 (lower is better)
Translates to: RSTGIRETTCEKAIESMDQLLTT*QISGYL
Trigger: CAGATATCCACTAATTTGCAACGTCGTCAGCAACTG...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAACTCAGCATCCCGAAATaGTGGTTCTCGAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQLSIPK*WFSKFF
Trigger: AAAGAACTTCGAGAACCACAATTTCGGGATGCTGAG...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR CAA 90 bp CATAATTCAAAAGCGTGTGACTTGGTTGCATTCTGTGTGGAATGGAAGGATTCACTCAGCATCCCGAAATaGTGGTTCTCGAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: HNSKACDLVAFCVEWKDSLSIPK*WFSKFF
Trigger: AAAGAACTTCGAGAACCACAATTTCGGGATGCTGAG...TGAATCCTTCCATTCCACACAGAATGCAACCAAGTCACACGCTTTTGAATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp CTGGCTACCACAAACATCAAACAGCTTGTCTTCGTAACTGGACAACTGCTCTTCTATGTATTCAATATCTaGTCCACGATAGGTACTTCG +
Preference number: 5 (lower is better)
Translates to: LATTNIKQLVFVTGQLLFYVFNI*STIGTS
Trigger: CGAAGTACCTATCGTGGACAAGATATTGAATACATA...GAAGAGCAGTTGTCCAGTTACGAAGACAAGCTGTTTGATGTTTGTGGTAGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR CAA 90 bp TGTGATGGCTATTCATTCCAATGTGGGGAAGGGGGATATTTGGAGACTGATCTAGATCGTGTATTGCCTTaGTTATTCTTTGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: CDGYSFQCGEGGYLETDLDRVLP*LFFAAT
Trigger: TGTTGCAGCAAAGAATAACAAAGGCAATACACGATC...TAGATCAGTCTCCAAATATCCCCCTTCCCCACATTGGAATGAATAGCCATCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TTTCTCTTTCATACACAATTTCCCCAATTTCCTACTGATTACTTTCACGTGAAGAGTGGGGTCAAAGAATaGCTGGGGTTGAGGACCACA +
Preference number: 5 (lower is better)
Translates to: FLFHTQFPQFPTDYFHVKSGVKE*LGLRTT
Trigger: TGTGGTCCTCAACCCCAGCAATTCTTTGACCCCACT...CTTCACGTGAAAGTAATCAGTAGGAAATTGGGGAAATTGTGTATGAAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp GTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGATGGATGAAGCTAGTTCCTaGTTTGTCTTTGGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: VDLSLSGASRSLDCKSLMDEASS*FVFGQH
Trigger: ATGCTGACCAAAGACAAACAAGGAACTAGCTTCATC...CATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423956.5
CDS CCA 90 bp CCTAAAGCATTTCTTCAAAGAATTGTAACAGGAGGTGATGGAATGTaGCTTTACCAGTACAATCTTCAATTTGGCAAGTCTGTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: PKAFLQRIVTGGDGM*LYQYNLQFGKSVPG
Trigger: ACCAGGGACAGACTTGCCAAATTGAAGATTGTACTGGTAAAGCCACATTCCATCACCTCCTGTTACAATTCTTTGAAGAAATGCTTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434288.1
ENST00000651160.1
CDS CCA 90 bp TGCTTCCAGATCAGCTGCAGACAACAGCAGAACTTCCTCAATAAGTaGGATCAAGTTCCTAAAGCATTTCTTCAAAGAATTGTAACAGGA +
Preference number: 5 (lower is better)
Translates to: CFQISCRQQQNFLNK*DQVPKAFLQRIVTG
Trigger: TCCTGTTACAATTCTTTGAAGAAATGCTTTAGGAACTTGATCCCACTTATTGAGGAAGTTCTGCTGTTGTCTGCAGCTGATCTGGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434288.1
ENST00000651160.1
CDS-3UTR CAA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGCGATCCGGGACATGTTaGCAAACGTTTCTAATCTCA +
Preference number: 5 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLRSGTC*QTFLIS
Trigger: TGAGATTAGAAACGTTTGCAAACATGTCCCGGATCG...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTCTTTCCCGCCCCATaGGGTCCAACCAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: IIVTSVRHTLALSSSGIIVFPAP*GPTKIV
Trigger: TACAATTTTGGTTGGACCCAATGGGGCGGGAAAGAC...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTCTCTGTACAAAGACACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: VSKGLTCSLASFISLYKDTNVFP*VPGGKS
Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...GTCTTTGTACAGAGAGATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCAACACACCATAGATCTTaGCACAGCTATAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSTHHRS*HSYKFS
Trigger: GGAGAACTTATAGCTGTGCAAAGATCTATGGTGTGT...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTGAATCTGTTCCTGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTTTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: LNLFLLVLYKLTIQFNLTFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...AGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp CGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCCTTTTACTTTCTGACCTaGTGTCTGACGTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: RCMSLLTFCSLFLNSGISFYFLT*CLTYLP
Trigger: CGGCAGGTACGTCAGACACAAGGTCAGAAAGTAAAA...GGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTAGCTCGGATATGTTCTaGATGGCGATCTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSSSDMF*MAICLQ
Trigger: CTGCAAGCAGATCGCCATCAAGAACATATCCGAGCT...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCTGTTTTTCTCAGCCTaGCTTAACTCACGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYLFFSA*LNSRSA
Trigger: AGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACAG...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR CAA 90 bp CCCAAGAGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTACCATTTGGGTACGTGTaGTTGTATGATGGTTTAACT +
Preference number: 5 (lower is better)
Translates to: PKSVSCSSMSFFRRCMSLPFGYV*LYDGLT
Trigger: AGTTAAACCATCATACAACAACACGTACCCAAATGG...TAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACTCTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCCCATTTGGGTACGTGTaGTTGTATGATGGTTTAACT +
Preference number: 5 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPPFGYV*LYDGLT
Trigger: AGTTAAACCATCATACAACAACACGTACCCAAATGG...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATGGTGAAGTGTGGGTGGAAGAATGGTGAAATCATTGATACTTTACAACAAGTTGGTCAGCATCTCCATTaGGGTACGTGTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: MVKCGWKNGEIIDTLQQVGQHLH*GTCCCM
Trigger: CATACAACAACACGTACCCAAATGGAGATGCTGACC...AACTTGTTGTAAAGTATCAATGATTTCACCATTCTTCCACCCACACTTCACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CAA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGTCATCTTTGTCAGCTTaGTCTTTGGTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLSSLSA*SLVSIS
Trigger: GGAGATGCTGACCAAAGACAAAGCTGACAAAGATGA...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTTGGGTACGTGTTGTTGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTCTGATTTGTTCATCTTaGTCAGCTTTGTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: FGYVLLYDGLTAPSPGQVLICSS*SALSLV
Trigger: GACCAAAGACAAAGCTGACAAAGATGAACAAATCAG...AACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAGTTCCTTGTTCAATTaGGCAAGTCTGTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: CWSCISLRFNSILLETVSSSLFN*ASLSLV
Trigger: GACCAGGGACAGACTTGCCAAATTGAACAAGGAACT...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTGCATGGCTCGCTGTTTaGATGATTTTTCAATTTCCT +
Preference number: 5 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVAWLAV*MIFQFP
Trigger: AGGAAATTGAAAAATCATCAAAACAGCGAGCCATGC...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCGCATGGCTCGCTGTTTaGATGATTTTTCAATTTCCT +
Preference number: 5 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPAWLAV*MIFQFP
Trigger: AGGAAATTGAAAAATCATCAAAACAGCGAGCCATGC...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp GTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: VTSVRHTLALSSSGIIVPSDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...GGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GAACTTTTCCAATGTTGTTTCCAAAGGGCTTACCTGCTCTTTAGCATCCTTTATCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: ELFQCCFQRAYLLFSILYQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...ATAAAGGATGCTAAAGAGCAGGTAAGCCCTTTGGAAACAACATTGGAAAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
CDS-3UTR CAA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVTQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: VRHTLALSSSGIIVPKSVETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...AACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGTCTGCTCCTCCAGTTGCTGACGACGTTGCAAATTAGTGGATATCTGAAGTTTCTGTGTATCAATATCTaGTCTCATGAGTCTCATATC +
Preference number: 5 (lower is better)
Translates to: SLLLQLLTTLQISGYLKFLCINI*SHESHI
Trigger: GATATGAGACTCATGAGACAAGATATTGATACACAG...AAACTTCAGATATCCACTAATTTGCAACGTCGTCAGCAACTGGAGGAGCAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp TGGAAGGATTCAAGATGTCAGCTGGCAATTCCAGGAAAAACTGTGATTAGGCTTTGCAAAACTGTGAGTTaGCTAAAGCTAGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: WKDSRCQLAIPGKTVIRLCKTVS*LKLGDV
Trigger: AACATCTCCTAGCTTTAGCAAACTCACAGTTTTGCA...AAGCCTAATCACAGTTTTTCCTGGAATTGCCAGCTGACATCTTGAATCCTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGTTGCTAGGATTCAATTaGGCAAGTCTGTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQLLGFN*ASLSLV
Trigger: GACCAGGGACAGACTTGCCAAATTGAATCCTAGCAA...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652016.1
CDS-3UTR CAA 90 bp ATCCAAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: IQAIRLHNQVFKFPILNSTNVFP*VPGGKS
Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...ACTGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTTCTCACATCTGTTTCTaGAGCAACCTTGGGATCGTG +
Preference number: 5 (lower is better)
Translates to: IIVTSVRHTLALSSSGIISHICF*SNLGIV
Trigger: CACGATCCCAAGGTTGCTCAAGAAACAGATGTGAGA...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACATCTGCAAAGTTTCCTTTGCTGTATAAAGTAACAGTCACGGGTTCTAGAAATATTGACATCACGAAATaGCAGACGAATCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: TSAKFPLLYKVTVTGSRNIDITK*QTNLGS
Trigger: AGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAAT...ATTTCTAGAACCCGTGACTGTTACTTTATACAGCAAAGGAAACTTTGCAGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378823.8
CDS-3UTR CAA 90 bp CGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTCCATTGACATCACGAAATaGCAGACGAATCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RCMSLLTFCSLFLNSGISIDITK*QTNLGS
Trigger: AGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAAT...GGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTATTGACATCACGAAATaGCAGACGAATCTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIIDITK*QTNLGS
Trigger: AGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAAT...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTTGTGCTATAAGTTCTCCATaGACATCACGAAATTGCAGA +
Preference number: 5 (lower is better)
Translates to: TCWTVRSKSIPCSLAACCAISSP*TSRNCR
Trigger: TCTGCAATTTCGTGATGTCAATGGAGAACTTATAGC...ACAACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGTTGGTTGGCAGTTTTaGCTTCCCCTTCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSVGWQF*LPLLVS
Trigger: AGAGACAAGAAGGGGAAGCAAAAACTGCCAACCAAC...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp CTCCATTTGCTTCTTTCGGCTATCCAAGGCTTTAATTTCATTGTCAAGTTTCATCTGTTTTTCTCAGCCTaGCTTAACTCACGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LHLLLSAIQGFNFIVKFHLFFSA*LNSRSA
Trigger: AGCTGAACGTGAGTTAAGCAAGGCTGAGAAAAACAG...ATGAAACTTGACAATGAAATTAAAGCCTTGGATAGCCGAAAGAAGCAAATGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp AAGCCATTAGGCTCCATAACCAGGTTTTTAAATTCCCCATCCTTAACAGTTACCTTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCT +
Preference number: 5 (lower is better)
Translates to: KPLGSITRFLNSPSLTVTFGYVL*YDGLTA
Trigger: AGCAGTTAAACCATCATACAACAACACGTACCCAAA...GGTAACTGTTAAGGATGGGGAATTTAAAAACCTGGTTATGGAGCCTAATGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651160.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ACTTGTTGGACAGTTCGATCTAAGTCTATTCCTTGTAGCTTAGCTGCTTGTTGTTTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCT +
Preference number: 5 (lower is better)
Translates to: TCWTVRSKSIPCSLAACCFGYVL*YDGLTA
Trigger: AGCAGTTAAACCATCATACAACAACACGTACCCAAA...ACAACAAGCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAACCATTTGGGTACGTGTaGTTGTATGATGGTTTAACT +
Preference number: 5 (lower is better)
Translates to: NICQAYFGTFFFRHYCTQPFGYV*LYDGLT
Trigger: AGTTAAACCATCATACAACAACACGTACCCAAATGG...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTCAGCATCTCCATTaGGGTACGTGTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSGQHLH*GTCCCM
Trigger: CATACAACAACACGTACCCAAATGGAGATGCTGACC...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTCAAATCAATTATGCTTaGCCTCATGGGCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVQINYA*PHGHKS
Trigger: GGACTTGTGCCCATGAGGCAAAGCATAATTGATTTG...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 5 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQSCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTCAGTTGCTGACGACGTaGCAAATTAGTGGATATCTG +
Preference number: 5 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVQLLTT*QISGYL
Trigger: CAGATATCCACTAATTTGCAACGTCGTCAGCAACTG...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GAATCCTGTCTGAAGATCCTTCCAACTGCTGTAATTCATACTTCACATTTTTCATTTCTCGGTCAAGATTaGTTGTTGGCTCATCCAAGG +
Preference number: 5 (lower is better)
Translates to: ESCLKILPTAVIHTSHFSFLGQD*LLAHPR
Trigger: CCTTGGATGAGCCAACAACAAATCTTGACCGAGAAA...TGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR CAA 90 bp AGAAGTACAGGCATCAGGGAAACAACCTGTGAAAAAGCCATAGAATCAATGGATGTTTCACTGCCTATATaGATCGTGTATTGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: RSTGIRETTCEKAIESMDVSLPI*IVYCLC
Trigger: ACAAAGGCAATACACGATCAATATAGGCAGTGAAAC...ATCCATTGATTCTATGGCTTTTTCACAGGTTGTTTCCCTGATGCCTGTACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378823.8
ENST00000651249.1
CDS-3UTR CAA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAAGCTAGTTCCTTGTTaGTCTTTGGTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: CWSCISLRFNSILLETVSKLVPC*SLVSIS
Trigger: GGAGATGCTGACCAAAGACAAACAAGGAACTAGCTT...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423956.5
CDS TCA 90 bp TACACAATTCTGACTGAAAAATTAAAGTTGAGTAAACGTTCTACTTaGTGGATGCCCAAAATCACTGCTTCCAGATCAGCTGCAGACAAC +
Preference number: 5 (lower is better)
Translates to: YTILTEKLKLSKRST*WMPKITASRSAADN
Trigger: GTTGTCTGCAGCTGATCTGGAAGCAGTGATTTTGGGCATCCATCAAGTAGAACGTTTACTCAACTTTAATTTTTCAGTCAGAATTGTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434288.1
ENST00000651160.1
CDS-3UTR CAA 90 bp CAAGGGACAAGAGGCCTAAATTACTATCCGTTACCATTTTACTTAATTTGCAAATCATCTTTGTCAGCTTaGTCTTTGGTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: QGTRGLNYYPLPFYLICKSSLSA*SLVSIS
Trigger: GGAGATGCTGACCAAAGACAAAGCTGACAAAGATGA...TTTGCAAATTAAGTAAAATGGTAACGGATAGTAATTTAGGCCTCTTGTCCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CAA 90 bp ATCTTACTAGAAACTGTGTCTAACTTGTGCTGTTTCTCTTGTTTCTCCTGGTTGCTGATTTGTTCATCTTaGTCAGCTTTGTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: ILLETVSNLCCFSCFSWLLICSS*SALSLV
Trigger: GACCAAAGACAAAGCTGACAAAGATGAACAAATCAG...CAACCAGGAGAAACAAGAGAAACAGCACAAGTTAGACACAGTTTCTAGTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 5 (lower is better)
Translates to: WSCISLRFNSILLETVSNSCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTTCTTGTTTCTCCTGGTaGACTTGTTGGACAGTTCGA +
Preference number: 5 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSSCFSW*TCWTVR
Trigger: TCGAACTGTCCAACAAGTCAACCAGGAGAAACAAGA...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: MSFFRRCMSLLTFCSLFLETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...AAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACCAGTTGCTGACGACGTaGCAAATTAGTGGATATCTG +
Preference number: 5 (lower is better)
Translates to: WSCISLRFNSILLETVSNQLLTT*QISGYL
Trigger: CAGATATCCACTAATTTGCAACGTCGTCAGCAACTG...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp GATTCTGTTGACTTGAGTTTATCTGGAGCAAGTCGCAGTTTAGACTGCAAATCACTGTGTATCAATATCTaGTCTCATGAGTCTCATATC +
Preference number: 5 (lower is better)
Translates to: DSVDLSLSGASRSLDCKSLCINI*SHESHI
Trigger: GATATGAGACTCATGAGACAAGATATTGATACACAG...TGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp TGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTATGTTCACTTTTCATTaGCAAAACCTGCATTTGACC +
Preference number: 5 (lower is better)
Translates to: CSSMSFFRRCMSLLTFCSMFTFH*QNLHLT
Trigger: GGTCAAATGCAGGTTTTGCAAATGAAAAGTGAACAT...ACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS-3UTR CAA 90 bp GTCTACAAATTTTCAAGGGACAAGAGGCCTAAATTACTATCCGTTACCATTTTAAGTACAATCTTCAATTaGGCAAGTCTGTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VYKFSRDKRPKLLSVTILSTIFN*ASLSLV
Trigger: GACCAGGGACAGACTTGCCAAATTGAAGATTGTACT...TAAAATGGTAACGGATAGTAATTTAGGCCTCTTGTCCCTTGAAAATTTGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CAA 90 bp TTCTTTAGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTAGTACAATCTTCAATTaGGCAAGTCTGTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: FFRRCMSLLTFCSLFLNSSTIFN*ASLSLV
Trigger: GACCAGGGACAGACTTGCCAAATTGAAGATTGTACT...AGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651160.1
CDS GCA 90 bp GTTTGTTTCTTAATTCTGGTATTTCCTTCTCCTTCAAATCAATTATaGTTTGCCTGCACTCCAGTAGACTGCCTATATTGGTTGCATGAA +
Preference number: 5 (lower is better)
Translates to: VCFLILVFPSPSNQL*FACTPVDCLYWLHE
Trigger: TTCATGCAACCAATATAGGCAGTCTACTGGAGTGCAGGCAAAGCATAATTGATTTGAAGGAGAAGGAAATACCAGAATTAAGAAACAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496204.1
CDS-3UTR CAA 90 bp AGTGTTTCTTGTTCTTCTATGTCGTTCTTTAGGCGCTGTATGTCTCTATTGACATTTAAGGTTTCTACATaGCTGTTTTTCTCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: SVSCSSMSFFRRCMSLLTFKVST*LFFSAL
Trigger: CAAGGCTGAGAAAAACAGCAATGTAGAAACCTTAAA...TGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAGAAACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGCTGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTTTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCT +
Preference number: 5 (lower is better)
Translates to: CWSCISLRFNSILLETVSFGYVL*YDGLTA
Trigger: AGCAGTTAAACCATCATACAACAACACGTACCCAAA...AGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTTTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCT +
Preference number: 5 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIFGYVL*YDGLTA
Trigger: AGCAGTTAAACCATCATACAACAACACGTACCCAAA...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTCCATTTGGGTACGTGTaGTTGTATGATGGTTTAACT +
Preference number: 5 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVPFGYV*LYDGLT
Trigger: AGTTAAACCATCATACAACAACACGTACCCAAATGG...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp AGGCGCTGTATGTCTCTATTGACATTCTGCAGTTTGTTTCTTAATTCTGGTATTGCATGGCTCGCTGTTTaGATGATTTTTCAATTTCCT +
Preference number: 5 (lower is better)
Translates to: RRCMSLLTFCSLFLNSGIAWLAV*MIFQFP
Trigger: AGGAAATTGAAAAATCATCAAAACAGCGAGCCATGC...AATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651723.1
CDS-3UTR CAA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQSDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQTQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TTCAACATCTTTAAGTTCCATCTGGAACCTCTCCATAATTGTAACATCTGTCAGGAAACTGTGTCTAACTaGTGCTGTTTCTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: FNIFKFHLEPLHNCNICQETVSN*CCFSCF
Trigger: GAAACAAGAGAAACAGCACAAGTTAGACACAGTTTC...CTGACAGATGTTACAATTATGGAGAGGTTCCAGATGGAACTTAAAGATGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp TGGTCCTGTATAAGCTTACGATTCAATTCAATCTTACTAGAAACTGTGTCTAACACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: WSCISLRFNSILLETVSNTNVFP*VPGGKS
Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...GTTAGACACAGTTTCTAGTAAGATTGAATTGAATCGTAAGCTTATACAGGACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTGCTATAAGTTCTCCATaGACATCACGAAATTGCAGA +
Preference number: 5 (lower is better)
Translates to: IIVTSVRHTLALSSSGIIAISSP*TSRNCR
Trigger: TCTGCAATTTCGTGATGTCAATGGAGAACTTATAGC...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATACTTTGGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCTTGTTAATCTCATCAAACTTTaGCTTCAAAGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ILWHFLLQALLYPRVFLVNLIKL*LQSLSF
Trigger: GAAGGAAAGGCTTTGAAGCAAAAGTTTGATGAGATT...AACAAGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp CAAGGGACAAGAGGCCTAAATTACTATCCGTTACCATTTTACTTAATTTGCAAATTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCT +
Preference number: 5 (lower is better)
Translates to: QGTRGLNYYPLPFYLICKFGYVL*YDGLTA
Trigger: AGCAGTTAAACCATCATACAACAACACGTACCCAAA...TTTGCAAATTAAGTAAAATGGTAACGGATAGTAATTTAGGCCTCTTGTCCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CAA 90 bp GTCTACAAATTTTCAAGGGACAAGAGGCCTAAATTACTATCCGTTACCATTTTACCATTTGGGTACGTGTaGTTGTATGATGGTTTAACT +
Preference number: 5 (lower is better)
Translates to: VYKFSRDKRPKLLSVTILPFGYV*LYDGLT
Trigger: AGTTAAACCATCATACAACAACACGTACCCAAATGG...TAAAATGGTAACGGATAGTAATTTAGGCCTCTTGTCCCTTGAAAATTTGTAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CAA 90 bp CAAGGGACAAGAGGCCTAAATTACTATCCGTTACCATTTTACTTAATTTGCAAACTGATTTGTTCATCTTaGTCAGCTTTGTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: QGTRGLNYYPLPFYLICKLICSS*SALSLV
Trigger: GACCAAAGACAAAGCTGACAAAGATGAACAAATCAG...TTTGCAAATTAAGTAAAATGGTAACGGATAGTAATTTAGGCCTCTTGTCCCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434288.1
CDS-3UTR CAA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTCTGATTTGTTCATCTTaGTCAGCTTTGTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: IIVTSVRHTLALSSSGIILICSS*SALSLV
Trigger: GACCAAAGACAAAGCTGACAAAGATGAACAAATCAG...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTTCTGATTCTGTTGACTaGAGTTTATCTGGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: IIVTSVRHTLALSSSGIISDSVD*SLSGAS
Trigger: ACTTGCTCCAGATAAACTCAAGTCAACAGAATCAGA...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS-3UTR CAA 90 bp ATAATTGTAACATCTGTCAGGCATACTTTGGCACTTTCTTCTTCAGGCATTATTACCCAAGAGTGTTTCTaGTTCTTCTATGTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: IIVTSVRHTLALSSSGIITQECF*FFYVVL
Trigger: AAGAACGACATAGAAGAACAAGAAACACTCTTGGGT...AATAATGCCTGAAGAAGAAAGTGCCAAAGTATGCCTGACAGATGTTACAATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000423956.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
CDS GCA 72 bp CAACCGCGCACTCACAGCTTCCTGCCTCGGCCGCCCTaGGGATCACGTGGGCCTCTAGGCCCGCACGCGTCC +
Preference number: 6 (lower is better)
Translates to: QPRTHSFLPRPP*GSRGPLGPHAS
Trigger: GGACGCGTGCGGGCCTAGAGGCCCACGTGATCCGCAGGGCGGCCGAGGCAGGAAGCTGTGAGTGCGCGGTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS CCA 72 bp TCACAGCTTCCTGCCTCGGCCGCCCTGCGGATCACGTaGGCCTCTAGGCCCGCACGCGTCCACGCCGCTCTC +
Preference number: 6 (lower is better)
Translates to: SQLPASAALRIT*ASRPARVHAAL
Trigger: GAGAGCGGCGTGGACGCGTGCGGGCCTAGAGGCCCACGTGATCCGCAGGGCGGCCGAGGCAGGAAGCTGTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533482.5
CDS GCA 72 bp ACATTCAATGATGGTAGCTTCCTGCCTCGGCCGCCCTaGGGATCACGTGGGCCTCTAGGCCCGCACGCGTCC +
Preference number: 6 (lower is better)
Translates to: TFNDGSFLPRPP*GSRGPLGPHAS
Trigger: GGACGCGTGCGGGCCTAGAGGCCCACGTGATCCGCAGGGCGGCCGAGGCAGGAAGCTACCATCATTGAATGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651541.1
CDS TCA 72 bp ATCTCACCAGGGACCTGGAGCCCACAAAGGCTTAACTaGGGCCGAAGCAAGGCGTGCACGGGACGTGAGACC +
Preference number: 6 (lower is better)
Translates to: ISPGTWSPQRLN*GRSKACTGRET
Trigger: GGTCTCACGTCCCGTGCACGCCTTGCTTCGGCCTCAGTTAAGCCTTTGTGGGCTCCAGGTCCCTGGTGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378823.8
ENST00000423956.5
ENST00000453394.5
ENST00000533482.5
ENST00000651160.1
ENST00000651723.1
ENST00000652016.1
ENST00000652485.1
CDS CAA 90 bp AACTCCGCACGCCCAGAATGCTCATCTTTTCGATCCGGGACATGTTaGCAAACGTTTCTAATCTCACCAGGGACCTGGAGCCCACAAAGG +
Preference number: 6 (lower is better)
Translates to: NSARPECSSFRSGTC*QTFLISPGTWSPQR
Trigger: CCTTTGTGGGCTCCAGGTCCCTGGTGAGATTAGAAACGTTTGCAAACATGTCCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000378823.8
ENST00000423956.5
ENST00000453394.5
ENST00000533482.5
ENST00000651160.1
ENST00000651658.1
ENST00000651723.1
ENST00000652016.1
ENST00000652485.1
CDS CAA 72 bp CGCCCAGAATGCTCATCTTTTCGATCCGGGACATGTTaGCAAACGTTTCTAATCTCACCAGGGACCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RPECSSFRSGTC*QTFLISPGTWS
Trigger: GCTCCAGGTCCCTGGTGAGATTAGAAACGTTTGCAAACATGTCCCGGATCGAAAAGATGAGCATTCTGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000378823.8
ENST00000423956.5
ENST00000453394.5
ENST00000533482.5
ENST00000651160.1
ENST00000651658.1
ENST00000651723.1
ENST00000652016.1
ENST00000652485.1
CDS GCA 72 bp AAGCTAGTTCCTTGCTGCCAGTCCTACTCATGGGCCTaGTCCCAGAAAAATGTACACAGAATTCTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: KLVPCCQSYSWA*SQKNVHRILPG
Trigger: ACCAGGCAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATGAGTAGGACTGGCAGCAAGGAACTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651658.1
CDS GCA 72 bp CTTTGTCCTCTATTCCAAAACTCCGCACGCCCAGAATaGTCATCTTTTCGATCCGGGACATGTTTGCAAACG +
Preference number: 6 (lower is better)
Translates to: LCPLFQNSARPE*SSFRSGTCLQT
Trigger: CGTTTGCAAACATGTCCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGGAGTTTTGGAATAGAGGACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378823.8
ENST00000423956.5
ENST00000453394.5
ENST00000533482.5
ENST00000651160.1
ENST00000651658.1
ENST00000651723.1
ENST00000652016.1
ENST00000652485.1
CDS CCA 72 bp CAGATGAAGCTAGTTCCTTGCTGCCAGTCCTACTCATaGGCCTGCTCCCAGAAAAATGTACACAGAATTCTG +
Preference number: 6 (lower is better)
Translates to: QMKLVPCCQSYS*ACSQKNVHRIL
Trigger: CAGAATTCTGTGTACATTTTTCTGGGAGCAGGCCCATGAGTAGGACTGGCAGCAAGGAACTAGCTTCATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651658.1
CDS CCA 72 bp TCCCAGAAAAATGTACACAGAATTCTGCCTGGTTTCTaGGGGTTCATGGTCTTTGATCCCAGGTTAAGCCTC +
Preference number: 6 (lower is better)
Translates to: SQKNVHRILPGF*GFMVFDPRLSL
Trigger: GAGGCTTAACCTGGGATCAAAGACCATGAACCCCCAGAAACCAGGCAGAATTCTGTGTACATTTTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651658.1
ENST00000652016.1
CDS TCA 72 bp TGCCTGCACTCCAGTAGACTGCCTATATTGGTTGCATaGATAGACAGTTCTCATGATAGTGGTGGCATCAAG +
Preference number: 6 (lower is better)
Translates to: CLHSSRLPILVA*IDSSHDSGGIK
Trigger: CTTGATGCCACCACTATCATGAGAACTGTCTATTCATGCAACCAATATAGGCAGTCTACTGGAGTGCAGGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496204.1
CDS TCA 72 bp GAATTTCCTCTCTGTAGAGAGAGCTCTGAGTCTGGATaGCCATTCAACCAGAGCATGTGCAAGAGATTCAAT +
Preference number: 6 (lower is better)
Translates to: EFPLCRESSESG*PFNQSMCKRFN
Trigger: ATTGAATCTCTTGCACATGCTCTGGTTGAATGGTCATCCAGACTCAGAGCTCTCTCTACAGAGAGGAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455677.1
CDS CAA 72 bp GTAAGGGGGCTGAAGAAAGTGATAATTTGCTTATCTTaGTCCTCTATTCCAAAACTCCGCACGCCCAGAATG +
Preference number: 6 (lower is better)
Translates to: VRGLKKVIICLS*SSIPKLRTPRM
Trigger: CATTCTGGGCGTGCGGAGTTTTGGAATAGAGGACAAAGATAAGCAAATTATCACTTTCTTCAGCCCCCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000378823.8
ENST00000423956.5
ENST00000453394.5
ENST00000533482.5
ENST00000651160.1
ENST00000651658.1
ENST00000651723.1
ENST00000652016.1
ENST00000652485.1
CDS CAA 72 bp CACACCATAGATCTTTGCACAGCTATAAGTTCTCCATaGACATCACGAAATTGCAGACGAATCTGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: HTIDLCTAISSP*TSRNCRRIWAL
Trigger: GAGAGCCCAGATTCGTCTGCAATTTCGTGATGTCAATGGAGAACTTATAGCTGTGCAAAGATCTATGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000378823.8
ENST00000416135.5
ENST00000423956.5
ENST00000453394.5
ENST00000651160.1
ENST00000651541.1
ENST00000651658.1
ENST00000652016.1
ENST00000652485.1
CDS CAA 72 bp GTTTGTCTTTGGTCAGCATCTCCATTTGGGTACGTGTaGTTGTATGATGGTTTAACTGCTCCATCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: VCLWSASPFGYV*LYDGLTAPSPG
Trigger: ACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAATGGAGATGCTGACCAAAGACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423956.5
CDS CAA 90 bp TTCCTTGTTTGTCTTTGGTCAGCATCTCCATTTGGGTACGTGTTGTaGTATGATGGTTTAACTGCTCCATCTCCTGGTCAAGTTTACGCA +
Preference number: 6 (lower is better)
Translates to: FLVCLWSASPFGYVL*YDGLTAPSPGQVYA
Trigger: TGCGTAAACTTGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACACGTACCCAAATGGAGATGCTGACCAAAGACAAACAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423956.5
CDS GCA 72 bp GTATTTCCTTCTCCTTCAAATCAATTATGCTTTGCCTaGACTCCAGTAGACTGCCTATATTGGTTGCATGAA +
Preference number: 6 (lower is better)
Translates to: VFPSPSNQLCFA*TPVDCLYWLHE
Trigger: TTCATGCAACCAATATAGGCAGTCTACTGGAGTGCAGGCAAAGCATAATTGATTTGAAGGAGAAGGAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496204.1
CDS CCA 72 bp ATCAGCTGCAGACAACAGCAGAACTTCCTCAATAAGTaGGATCAAGTTCCTAAAGCATTTCTTCAAAGAATT +
Preference number: 6 (lower is better)
Translates to: ISCRQQQNFLNK*DQVPKAFLQRI
Trigger: AATTCTTTGAAGAAATGCTTTAGGAACTTGATCCCACTTATTGAGGAAGTTCTGCTGTTGTCTGCAGCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434288.1
ENST00000651160.1
CDS GCA 72 bp CAAATTTGGAATTACTGTAGTGGTATAATTTGCCTCTaGCTGCCTTGGAAAAATGTAGGAAATGTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: QIWNYCSGIICL*LPWKNVGNVSP
Trigger: TGGAGAAACATTTCCTACATTTTTCCAAGGCAGGCAGAGGCAAATTATACCACTACAGTAATTCCAAATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416135.5
CDS CCA 72 bp TTTCTTCAAAGAATTGTAACAGGAGGTGATGGAATGTaGCTTTACCAGTACAATCTTCAATTTGGCAAGTCT +
Preference number: 6 (lower is better)
Translates to: FLQRIVTGGDGM*LYQYNLQFGKS
Trigger: AGACTTGCCAAATTGAAGATTGTACTGGTAAAGCCACATTCCATCACCTCCTGTTACAATTCTTTGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434288.1
ENST00000651160.1
CDS CAA 72 bp TGTCTTTTTGCTTTTCTGAGTACACACCATAGATCTTaGCACAGCTATAAGTTCTCCATTGACATCACGAAA +
Preference number: 6 (lower is better)
Translates to: CLFAFLSTHHRS*HSYKFSIDITK
Trigger: TTTCGTGATGTCAATGGAGAACTTATAGCTGTGCAAAGATCTATGGTGTGTACTCAGAAAAGCAAAAAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000378823.8
ENST00000416135.5
ENST00000423956.5
ENST00000453394.5
ENST00000651160.1
ENST00000651541.1
ENST00000651658.1
ENST00000652016.1
ENST00000652485.1
CDS CAA 90 bp TTTAAATTCTGTCTTTTTGCTTTTCTGAGTACACACCATAGATCTTaGCACAGCTATAAGTTCTCCATTGACATCACGAAATTGCAGACG +
Preference number: 6 (lower is better)
Translates to: FKFCLFAFLSTHHRS*HSYKFSIDITKLQT
Trigger: CGTCTGCAATTTCGTGATGTCAATGGAGAACTTATAGCTGTGCAAAGATCTATGGTGTGTACTCAGAAAAGCAAAAAGACAGAATTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000378823.8
ENST00000416135.5
ENST00000423956.5
ENST00000453394.5
ENST00000651160.1
ENST00000651541.1
ENST00000651658.1
ENST00000652016.1
ENST00000652485.1