Pregenerated sensors for RAD23B (Homo sapiens)
Ensembl gene IDs: ENSG00000119318Ensembl transcript IDs: ENST00000358015.8, ENST00000416373.6, ENST00000419616.5, ENST00000442587.1, ENST00000457811.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATaGCAGTATACCTCGAATGCAAAATTCCAAAGTCAAATAGCTACT | + |
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Preference number: 1 (lower is better) Translates to: HISHRATKREKDFKK*QYTSNAKFQSQIAT Trigger: AGTAGCTATTTGACTTTGGAATTTTGCATTCGAGGTATACTGTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| 3UTR-3UTR CCA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCAGCCTGTCATGTTTATaGCAGTGGTGTGATCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: VQGHKLHATFCCHFPRRGSLSCL*QWCDLS Trigger: GCTGAGATCACACCACTGCCATAAACATGACAGGCT...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR TCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTTATGGCAGTGGTGTaGTCTCAGCTCACGGCAACC | + |
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Preference number: 2 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTFMAVV*SQLTAT Trigger: GGTTGCCGTGAGCTGAGATCACACCACTGCCATAAA...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR GCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTAGGGAGAGTGAATGCTaGATTTCTCCATTGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTRESEC*ISPLAP Trigger: TGGGGCCAATGGAGAAATGCAGCATTCACTCTCCCT...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR GCA 90 bp | ATATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACGACAGGGAGAGTGAATaGTGCATTTCTCCATTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ISRFVVQGHKLHATFCCHDRESE*CISPLA Trigger: GGCCAATGGAGAAATGCAGCATTCACTCTCCCTGTC...GTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCGACAGGGAGAGTGAATaGTGCATTTCTCCATTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SKVLSSHISQPIQKTLPVDRESE*CISPLA Trigger: GGCCAATGGAGAAATGCAGCATTCACTCTCCCTGTC...GACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR CCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTAGCCTGTCATGTTTATaGCAGTGGTGTGATCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTSLSCL*QWCDLS Trigger: GCTGAGATCACACCACTGCCATAAACATGACAGGCT...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR TCA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCCTCATTGCTCTGACTTaGAAGATGAACGTATATATG | + |
|
Preference number: 2 (lower is better) Translates to: VQGHKLHATFCCHFPRRGLIALT*KMNVYM Trigger: CATATATACGTTCATCTTTCAAGTCAGAGCAATGAG...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR GCA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCTGCCAGTCTTTCCAATaGAATAAAAGATGCTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: VQGHKLHATFCCHFPRRGCQSFQ*NKRCWI Trigger: AATCCAGCATCTTTTATTGCATTGGAAAGACTGGCA...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR TCA 90 bp | ATATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACCATCTGCCCCGTTTATaGTTAAATAACAATGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: ISRFVVQGHKLHATFCCHHLPRL*LNNNAN Trigger: ATTGGCATTGTTATTTAATCATAAACGGGGCAGATG...GTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR-3UTR GCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTCTTTTCCCAACTCATTaGTCTGACTTGAAAGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTLFPTH*SDLKDE Trigger: TTCATCTTTCAAGTCAGAGCAATGAGTTGGGAAAAG...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR GCA 72 bp | ATCCGATCAGAAATGCCACCTCTTTTCCCAACTCATTaGTCTGACTTGAAAGATGAACGTATATATGAATTC | + |
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Preference number: 3 (lower is better) Translates to: IRSEMPPLFPTH*SDLKDERIYEF Trigger: GAATTCATATATACGTTCATCTTTCAAGTCAGAGCAATGAGTTGGGAAAAGAGGTGGCATTTCTGATCGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| 3UTR TCA 72 bp | CACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATaGCAGTATACCTCGAATGCAAAATTCCAAAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: HRATKREKDFKK*QYTSNAKFQSQ Trigger: TTGACTTTGGAATTTTGCATTCGAGGTATACTGTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR GCA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCGCCAGCCACGGAGTCTaGAGAAGGCGCGAGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQGHKLHATFCCHFPRRGASHGV*RRREGV Trigger: GACCCCCTCGCGCCTTCTGCAGACTCCGTGGCTGGC...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS-3UTR CCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTGCGCTCCTCGCGCTCTaGGGAGGAAGGCGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTALLAL*GGRRWG Trigger: CCCCCACCGCCTTCCTCCCCAGAGCGCGAGGAGCGC...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS-3UTR GCA 90 bp | TCCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCGAACTCGGGCCGCCGTaGTTCCTCACGCGCCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKVLSSHISQPIQKTLPVELGPP*FLTRRA Trigger: CGCTCGGCGCGTGAGGAAGCACGGCGGCCCGAGTTC...GACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS-3UTR GCA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCAGGGAGAGTGAATGCTaGATTTCTCCATTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQGHKLHATFCCHFPRRGRESEC*ISPLAP Trigger: TGGGGCCAATGGAGAAATGCAGCATTCACTCTCCCT...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR TCA 90 bp | GGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCTGTTTTTTTATGGCAGTGGTGTaGTCTCAGCTCACGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GHKLHATFCCHFPRRGCFFMAVV*SQLTAT Trigger: GGTTGCCGTGAGCTGAGATCACACCACTGCCATAAA...AAAACAGCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCC 51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACCGCTGCCTCCGCGACTaGGGCCTTCCCCGCGAACTC | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDRCLRD*GLPREL Trigger: GAGTTCGCGGGGAAGGCCGCAGTCGCGGAGGCAGCG...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS-3UTR GCA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCTTCTCTCGACCTATCTaGTGTAGTAACGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VQGHKLHATFCCHFPRRGFSRPI*CSNAGS Trigger: GCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAA...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | GGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCTGTTTTAGGACACAAGCTCCATaGCACCTTCTGCTGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GHKLHATFCCHFPRRGCFRTQAP*HLLLSL Trigger: AAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCT...AAAACAGCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | ATATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACAGCTGCACTAGCAGGTaGAGGTTCAGAAGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISRFVVQGHKLHATFCCHSCTSR*RFRRCC Trigger: ACAGCATCTTCTGAACCTGCACCTGCTAGTGCAGCT...GTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTGACAGGGAGAGTGAATaGTGCATTTCTCCATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTDRESE*CISPLA Trigger: GGCCAATGGAGAAATGCAGCATTCACTCTCCCTGTC...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTAGGACACAAGCTCCATaGCACCTTCTGCTGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTRTQAP*HLLLSL Trigger: AAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCT...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | ATATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACAATCTTCTCTTTCAGTaGTTTCACCGTCTCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: ISRFVVQGHKLHATFCCHNLLFQ*FHRLLG Trigger: CCCGAGGAGACGGTGAAAGCACTGAAAGAGAAGATT...GTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS-3UTR GCA 90 bp | TCCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCCTGACCCGTCACAAGTaGACTCGTTGCATCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SKVLSSHISQPIQKTLPVLTRHK*TRCIFK Trigger: TTTGAAGATGCAACGAGTGCACTTGTGACGGGTCAG...GACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | CCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCTTTCTCTCGACCTATCTaGTGTAGTAACGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PKYFPATSPNPSKRLCQSFSRPI*CSNAGS Trigger: GCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAA...AGACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCCCATCCAAAAGACTTTaGCAGTCTTTCCAATGCAAT | + |
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Preference number: 4 (lower is better) Translates to: VQGHKLHATFCCHFPRRGPSKRL*QSFQCN Trigger: ATTGCATTGGAAAGACTGGCAAAGTCTTTTGGATGG...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | CCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCTCTCCATGCCACCTTCTaGTGTCACTTTCCAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PKYFPATSPNPSKRLCQSLHATF*CHFPRR Trigger: TCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAG...AGACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | ATATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACAATCTTCTCTTTCAGTaGTTTCACCTCTCGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISRFVVQGHKLHATFCCHNLLFQ*FHLSAA Trigger: TGCCGCCGAGAGGTGAAAGCACTGAAAGAGAAGATT...GTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416373.6 |
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| CDS-3UTR CCA 90 bp | ATATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACAGCCTGTCATGTTTATaGCAGTGGTGTGATCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: ISRFVVQGHKLHATFCCHSLSCL*QWCDLS Trigger: GCTGAGATCACACCACTGCCATAAACATGACAGGCT...GTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR CCA 90 bp | CCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCTGGAACGATCAAAACTTaGCCTGAGCTGTCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PKYFPATSPNPSKRLCQSGTIKT*PELSSD Trigger: ATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCC...AGACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR TCA 90 bp | GGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCTGTTTTTTATGGTGTCTCGGCTaGTTCTTTAAGAAGCAGATA | + |
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Preference number: 4 (lower is better) Translates to: GHKLHATFCCHFPRRGCFLWCLG*FFKKQI Trigger: TATCTGCTTCTTAAAGAATCAGCCGAGACACCATAA...AAAACAGCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR TCA 90 bp | GGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCTGTTTTCATCTGCCCCGTTTATaGTTAAATAACAATGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: GHKLHATFCCHFPRRGCFHLPRL*LNNNAN Trigger: ATTGGCATTGTTATTTAATCATAAACGGGGCAGATG...AAAACAGCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR TCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTACAGATTTGAAAAACTaGACAAGTAGACATCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTTDLKN*TSRHLP Trigger: GGGCAGATGTCTACTTGTTCAGTTTTTCAAATCTGT...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTCCATCCAAAAGACTTTaGCAGTCTTTCCAATGCAAT | + |
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Preference number: 4 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTPSKRL*QSFQCN Trigger: ATTGCATTGGAAAGACTGGCAAAGTCTTTTGGATGG...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR CCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTAAACAAGGTACTGTATaGAACGATCAAAACTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTKQGTV*NDQNLA Trigger: GGCCAAGTTTTGATCGTTCCATACAGTACCTTGTTT...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR TCA 90 bp | TATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTCTCATTGCTCTGACTTaGAAGATGAACGTATATATG | + |
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Preference number: 4 (lower is better) Translates to: YPDLLSKDTSSMPPSAVTLIALT*KMNVYM Trigger: CATATATACGTTCATCTTTCAAGTCAGAGCAATGAG...AGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TACTGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTAGCTGCACTAGCAGGTaGAGGTTCAGAAGATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YCMERSKLGLSCLLIINPSCTSR*RFRRCC Trigger: ACAGCATCTTCTGAACCTGCACCTGCTAGTGCAGCT...AGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR GCA 90 bp | ATATCCAGATTTGTTGTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACCTTTTCCCAACTCATTaGTCTGACTTGAAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: ISRFVVQGHKLHATFCCHLFPTH*SDLKDE Trigger: TTCATCTTTCAAGTCAGAGCAATGAGTTGGGAAAAG...GTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGACAACAAATCTGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | CCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCTCTTTTCCCAACTCATTaGTCTGACTTGAAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: PKYFPATSPNPSKRLCQSLFPTH*SDLKDE Trigger: TTCATCTTTCAAGTCAGAGCAATGAGTTGGGAAAAG...AGACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TACTGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTAGGACACAAGCTCCATaGCACCTTCTGCTGTCACTT | + |
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Preference number: 4 (lower is better) Translates to: YCMERSKLGLSCLLIINPRTQAP*HLLLSL Trigger: AAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCT...AGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR GCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACTGCTGGTGTGGACACTaGTTTGGGTTTGGTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDCWCGH*FGFGHH Trigger: ATGGTGACCAAACCCAAAGCAGTGTCCACACCAGCA...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACAGCTGCACTAGCAGGTaGAGGTTCAGAAGATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDSCTSR*RFRRCC Trigger: ACAGCATCTTCTGAACCTGCACCTGCTAGTGCAGCT...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR GCA 90 bp | TACTGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTCTGACCCGTCACAAGTaGACTCGTTGCATCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: YCMERSKLGLSCLLIINPLTRHK*TRCIFK Trigger: TTTGAAGATGCAACGAGTGCACTTGTGACGGGTCAG...AGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR GCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACGACAGGGAGAGTGAATaGTGCATTTCTCCATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDDRESE*CISPLA Trigger: GGCCAATGGAGAAATGCAGCATTCACTCTCCCTGTC...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACCTGACCCGTCACAAGTaGACTCGTTGCATCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDLTRHK*TRCIFK Trigger: TTTGAAGATGCAACGAGTGCACTTGTGACGGGTCAG...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR GCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACCTCCATGCCACCTTCTaGTGTCACTTTCCAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDLHATF*CHFPRR Trigger: TCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAG...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR CCA 90 bp | TACTGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTGGAACGATCAAAACTTaGCCTGAGCTGTCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: YCMERSKLGLSCLLIINPGTIKT*PELSSD Trigger: ATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCC...AGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR TCA 90 bp | TACTGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTACAGATTTGAAAAACTaGACAAGTAGACATCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: YCMERSKLGLSCLLIINPTDLKN*TSRHLP Trigger: GGGCAGATGTCTACTTGTTCAGTTTTTCAAATCTGT...AGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR TCA 90 bp | TGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTAGTTTATGGTGTCTCGGCTaGTTCTTTAAGAAGCAGATA | + |
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Preference number: 4 (lower is better) Translates to: CMERSKLGLSCLLIINPSLWCLG*FFKKQI Trigger: TATCTGCTTCTTAAAGAATCAGCCGAGACACCATAA...ACTAGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR CCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACAAACAAGGTACTGTATaGAACGATCAAAACTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDKQGTV*NDQNLA Trigger: GGCCAAGTTTTGATCGTTCCATACAGTACCTTGTTT...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS-3UTR TCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACCATCTGCCCCGTTTATaGTTAAATAACAATGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDHLPRL*LNNNAN Trigger: ATTGGCATTGTTATTTAATCATAAACGGGGCAGATG...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR TCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACCTCATTGCTCTGACTTaGAAGATGAACGTATATATG | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDLIALT*KMNVYM Trigger: CATATATACGTTCATCTTTCAAGTCAGAGCAATGAG...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR GCA 90 bp | TTCCTCACATTTCCCACAGAGCAACTAAACGAGAAAAAGATTTCAAGAAATGACTGCCAGTCTTTCCAATaGAATAAAAGATGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: FLTFPTEQLNEKKISRNDCQSFQ*NKRCWI Trigger: AATCCAGCATCTTTTATTGCATTGGAAAGACTGGCA...GTCATTTCTTGAAATCTTTTTCTCGTTTAGTTGCTCTGTGGGAAATGTGAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS GCA 90 bp | CGCTGCCTCCGCGACTGCGGCCTTCCCCGCGAACTCGGGCCGCCGTaGTTCCTCACGCGCCGAGCGCCAGCCACGGAGTCTGCAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: RCLRDCGLPRELGPP*FLTRRAPATESAEG Trigger: GCCTTCTGCAGACTCCGTGGCTGGCGCTCGGCGCGTGAGGAAGCACGGCGGCCCGAGTTCGCGGGGAAGGCCGCAGTCGCGGAGGCAGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS-3UTR CAA 90 bp | TGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTAGTGGTGGGGGTGGGGGCTaGTCACATTCGCCCAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: CMERSKLGLSCLLIINPSGGGGG*SHSPSG Trigger: TCCGCTGGGCGAATGTGACAAGCCCCCACCCCCACC...ACTAGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS-3UTR CAA 90 bp | GTCCAAGGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCCTAGTATATCCAGATTaGTTGTCCAAGGACACAAGC | + |
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Preference number: 5 (lower is better) Translates to: VQGHKLHATFCCHFPRRGLVYPD*LSKDTS Trigger: GCTTGTGTCCTTGGACAACAAATCTGGATATACTAG...GCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCCTTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR CAA 90 bp | CCAAAGTACTTTCCAGCCACATCTCCCAACCCATCCAAAAGACTTTGCCAGTCTGTATATCCAGATTTGTaGTCCAAGGACACAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PKYFPATSPNPSKRLCQSVYPDL*SKDTSS Trigger: GGAGCTTGTGTCCTTGGACAACAAATCTGGATATAC...AGACTGGCAAAGTCTTTTGGATGGGTTGGGAGATGTGGCTGGAAAGTACTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR CAA 90 bp | GGACACAAGCTCCATGCCACCTTCTGCTGTCACTTTCCAAGAAGAGGCTGTTTTCTAGTATATCCAGATTaGTTGTCCAAGGACACAAGC | + |
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Preference number: 5 (lower is better) Translates to: GHKLHATFCCHFPRRGCFLVYPD*LSKDTS Trigger: GCTTGTGTCCTTGGACAACAAATCTGGATATACTAG...AAAACAGCCTCTTCTTGGAAAGTGACAGCAGAAGGTGGCATGGAGCTTGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000358015.8 ENST00000416373.6 |
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| CDS-3UTR CAA 90 bp | TGTATGGAACGATCAAAACTTGGCCTGAGCTGTCTTCTGATAATTAATCCTAGTGTATATCCAGATTTGTaGTCCAAGGACACAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CMERSKLGLSCLLIINPSVYPDL*SKDTSS Trigger: GGAGCTTGTGTCCTTGGACAACAAATCTGGATATAC...ACTAGGATTAATTATCAGAAGACAGCTCAGGCCAAGTTTTGATCGTTCCATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000358015.8 ENST00000416373.6 ENST00000457811.1 |
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| CDS GCA 72 bp | AGCCCGTGCCCCGGACCGCGCCGCTGCCTCCGCGACTaGGGCCTTCCCCGCGAACTCGGGCCGCCGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPCPGPRRCLRD*GLPRELGPPCF Trigger: GAAGCACGGCGGCCCGAGTTCGCGGGGAAGGCCGCAGTCGCGGAGGCAGCGGCGCGGTCCGGGGCACGGGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS GCA 72 bp | GGGCGAAGCGCGCAGGCGTGGGGTGCGGCGACGCTTTaGGCCGGCGCGGCCGAGGACTCCGCCCCAGAATTG | + |
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Preference number: 6 (lower is better) Translates to: GRSAQAWGAATL*AGAAEDSAPEL Trigger: CAATTCTGGGGCGGAGTCCTCGGCCGCGCCGGCGCAAAGCGTCGCCGCACCCCACGCCTGCGCGCTTCGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419616.5 |
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| CDS GCA 72 bp | CGCGACTGCGGCCTTCCCCGCGAACTCGGGCCGCCGTaGTTCCTCACGCGCCGAGCGCCAGCCACGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: RDCGLPRELGPP*FLTRRAPATES Trigger: AGACTCCGTGGCTGGCGCTCGGCGCGTGAGGAAGCACGGCGGCCCGAGTTCGCGGGGAAGGCCGCAGTCGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358015.8 |
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| CDS TCA 72 bp | CTCCTCGCGCTCACAGGATGGTGGCCGCCATCATCGTaGCTCGCCGAGACGTGCCCCCTCCCCCACGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLALTGWWPPSS*LAETCPLPHAK Trigger: TTTCGCGTGGGGGAGGGGGCACGTCTCGGCGAGTCACGATGATGGCGGCCACCATCCTGTGAGCGCGAGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000419616.5 |
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| CDS CCA 72 bp | CCCAAGGTCATAGCAAATAAGTTACAAAACCACAAATaGAACTCAGGTCTACTTAACACCAAAGCCCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PKVIANKLQNHK*NSGLLNTKAPD Trigger: ATCAGGGGCTTTGGTGTTAAGTAGACCTGAGTTCCATTTGTGGTTTTGTAACTTATTTGCTATGACCTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442587.1 |
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| CDS CAA 72 bp | TATCCCTATTATACAGAGAATGAAACTAACCGTAATTaGCCCAAGGTCATAGCAAATAAGTTACAAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: YPYYTENETNRN*PKVIANKLQNH Trigger: GTGGTTTTGTAACTTATTTGCTATGACCTTGGGCAAATTACGGTTAGTTTCATTCTCTGTATAATAGGGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442587.1 |
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