Pregenerated sensors for RAD21L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000244588Ensembl transcript IDs: ENST00000246108.3, ENST00000402452.5, ENST00000409241.5, ENST00000683101.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCGCGTGCGGGCGAGGAGACCCCGGGTCGCGCCTCCAGCCCCAGCTaGGCTGCGGGCGACGACCTTTCTTCCTCAGGCGGGACCCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: PRAGEETPGRASSPS*AAGDDLSSSGGTLR Trigger: CCGGAGGGTCCCGCCTGAGGAAGAAAGGTCGTCGCCCGCAGCCCAGCTGGGGCTGGAGGCGCGACCCGGGGTCTCCTCGCCCGCACGCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246108.3 |
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| CDS CCA 90 bp | GCTGCGGGCGACGACCTTTCTTCCTCAGGCGGGACCCTCCGGGCTTaGCGCCGCGAGCTAACACGGCGTGAGGCGCCGGCGCCGGGTGCG | + |
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Preference number: 5 (lower is better) Translates to: AAGDDLSSSGGTLRA*RRELTRREAPAPGA Trigger: CGCACCCGGCGCCGGCGCCTCACGCCGTGTTAGCTCGCGGCGCCAAGCCCGGAGGGTCCCGCCTGAGGAAGAAAGGTCGTCGCCCGCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246108.3 |
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| CDS CCA 90 bp | TGTGAGTTTCTTCTCCCAGTGAGCTGCAAGCCATATTTTGGCCAATaGCCCTCGTTTACTCATAAGCACATGTGTGTAGAACATGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: CEFLLPVSCKPYFGQ*PSFTHKHMCVEHVA Trigger: GGCAACATGTTCTACACACATGTGCTTATGAGTAAACGAGGGCCATTGGCCAAAATATGGCTTGCAGCTCACTGGGAGAAGAAACTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246108.3 ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS TCA 90 bp | AGATTACATTCAAATACATGGGCCTTTGTGAGTTTCTTCTCCCAGTaGGCTGCAAGCCATATTTTGGCCAATGGCCCTCGTTTACTCATA | + |
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Preference number: 5 (lower is better) Translates to: RLHSNTWAFVSFFSQ*AASHILANGPRLLI Trigger: TATGAGTAAACGAGGGCCATTGGCCAAAATATGGCTTGCAGCTCACTGGGAGAAGAAACTCACAAAGGCCCATGTATTTGAATGTAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246108.3 ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS TCA 90 bp | CTCCAAACCCATCTCCACTGTCATAGAATAGAGATCGTTCTCCAGTaGGGCTTCCAGAACTATGTTCAATTAAAGGACCACTGGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: LQTHLHCHRIEIVLQ*GFQNYVQLKDHWNS Trigger: TGAATTCCAGTGGTCCTTTAATTGAACATAGTTCTGGAAGCCTCACTGGAGAACGATCTCTATTCTATGACAGTGGAGATGGGTTTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS TCA 90 bp | AAACAACATTTTCAGTTCAGCATGAATCAAATCCTGGGCAGCAGTTaGCAGAAGTGTATGCACTCCTCCCCTCTTCTTCCACATCATCAA | + |
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Preference number: 5 (lower is better) Translates to: KQHFQFSMNQILGSS*QKCMHSSPLLPHHQ Trigger: TTGATGATGTGGAAGAAGAGGGGAGGAGTGCATACACTTCTGTCAACTGCTGCCCAGGATTTGATTCATGCTGAACTGAAAATGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS TCA 90 bp | TTTCAATGGTTATCTCTAGATTACATTCAAATACATGGGCCTTTGTaGGTTTCTTCTCCCAGTGAGCTGCAAGCCATATTTTGGCCAATG | + |
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Preference number: 5 (lower is better) Translates to: FQWLSLDYIQIHGPL*VSSPSELQAIFWPM Trigger: CATTGGCCAAAATATGGCTTGCAGCTCACTGGGAGAAGAAACTCACAAAGGCCCATGTATTTGAATGTAATCTAGAGATAACCATTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246108.3 ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS CCA 72 bp | GGCGTGAGGCGCCGGCGCCGGGTGCGTGTGGGAATGTaGGTGGCGGCGGCCCCCATCTCCCAGCCCGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: GVRRRRRVRVGM*VAAAPISQPAY Trigger: GTAGGCGGGCTGGGAGATGGGGGCCGCCGCCACCCACATTCCCACACGCACCCGGCGCCGGCGCCTCACGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246108.3 |
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| CDS CCA 72 bp | GACGACCTTTCTTCCTCAGGCGGGACCCTCCGGGCTTaGCGCCGCGAGCTAACACGGCGTGAGGCGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: DDLSSSGGTLRA*RRELTRREAPA Trigger: CGCCGGCGCCTCACGCCGTGTTAGCTCGCGGCGCCAAGCCCGGAGGGTCCCGCCTGAGGAAGAAAGGTCGTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246108.3 |
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| CDS TCA 72 bp | TTTCAGTTCAGCATGAATCAAATCCTGGGCAGCAGTTaGCAGAAGTGTATGCACTCCTCCCCTCTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FQFSMNQILGSS*QKCMHSSPLLP Trigger: TGGAAGAAGAGGGGAGGAGTGCATACACTTCTGTCAACTGCTGCCCAGGATTTGATTCATGCTGAACTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS CCA 72 bp | CTTCTCCCAGTGAGCTGCAAGCCATATTTTGGCCAATaGCCCTCGTTTACTCATAAGCACATGTGTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLPVSCKPYFGQ*PSFTHKHMCVE Trigger: TTCTACACACATGTGCTTATGAGTAAACGAGGGCCATTGGCCAAAATATGGCTTGCAGCTCACTGGGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246108.3 ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS CAA 72 bp | TTTTCAGTTCAGCATGAATCAAATCCTGGGCAGCAGTaGACAGAAGTGTATGCACTCCTCCCCTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSVQHESNPGQQ*TEVYALLPSSS Trigger: GGAAGAAGAGGGGAGGAGTGCATACACTTCTGTCAACTGCTGCCCAGGATTTGATTCATGCTGAACTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS GCA 72 bp | GTTATAAAACATTGGTCCCATCGTAGCTATAATATCTaGATAGGGAGCACTCTGGCTCAGCTCAATAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VIKHWSHRSYNI*IGSTLAQLNSQ Trigger: CTGGCTATTGAGCTGAGCCAGAGTGCTCCCTATGCAGATATTATAGCTACGATGGGACCAATGTTTTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409241.5 ENST00000683101.1 |
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| CDS TCA 72 bp | CATCTCCACTGTCATAGAATAGAGATCGTTCTCCAGTaGGGCTTCCAGAACTATGTTCAATTAAAGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: HLHCHRIEIVLQ*GFQNYVQLKDH Trigger: GTGGTCCTTTAATTGAACATAGTTCTGGAAGCCTCACTGGAGAACGATCTCTATTCTATGACAGTGGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS CAA 90 bp | ACCATGAGTGTGTCCGCAAAGGAAGTAAGCTGTTTATGTATAACTTaGCTACTGAGCTCCTTGATAGGATCTATGAGCAATCTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TMSVSAKEVSCLCIT*LLSSLIGSMSNLLF Trigger: AAAGAGGAGATTGCTCATAGATCCTATCAAGGAGCTCAGTAGCAAAGTTATACATAAACAGCTTACTTCCTTTGCGGACACACTCATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS GCA 72 bp | AATGGATCAGACCTTCAGCTGCTTCCAGATGGCTTCTaGATTAAATTGAACAATCTACACAGAAATTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: NGSDLQLLPDGF*IKLNNLHRNSS Trigger: ACTGGAATTTCTGTGTAGATTGTTCAATTTAATGCAGAAGCCATCTGGAAGCAGCTGAAGGTCTGATCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683101.1 |
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| CDS CAA 72 bp | GTGTCCGCAAAGGAAGTAAGCTGTTTATGTATAACTTaGCTACTGAGCTCCTTGATAGGATCTATGAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VSAKEVSCLCIT*LLSSLIGSMSN Trigger: ATTGCTCATAGATCCTATCAAGGAGCTCAGTAGCAAAGTTATACATAAACAGCTTACTTCCTTTGCGGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS TCA 72 bp | TTATCTCTAGATTACATTCAAATACATGGGCCTTTGTaGGTTTCTTCTCCCAGTGAGCTGCAAGCCATATTT | + |
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Preference number: 6 (lower is better) Translates to: LSLDYIQIHGPL*VSSPSELQAIF Trigger: AAATATGGCTTGCAGCTCACTGGGAGAAGAAACTCACAAAGGCCCATGTATTTGAATGTAATCTAGAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000246108.3 ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS GCA 72 bp | TCACTATTTCTACAGAGCTTCATCAGACTAAAGGACTaGATTCCCATCTTGTTAGATTCCCGTAAACGATTT | + |
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Preference number: 6 (lower is better) Translates to: SLFLQSFIRLKD*IPILLDSRKRF Trigger: AAATCGTTTACGGGAATCTAACAAGATGGGAATGCAGTCCTTTAGTCTGATGAAGCTCTGTAGAAATAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409241.5 ENST00000683101.1 |
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| CDS CAA 72 bp | GTAAGCTGTTTATGTATAACTTTGCTACTGAGCTCCTaGATAGGATCTATGAGCAATCTCCTCTTTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VSCLCITLLLSS*IGSMSNLLFLP Trigger: AGGCAAAAAGAGGAGATTGCTCATAGATCCTATCAAGGAGCTCAGTAGCAAAGTTATACATAAACAGCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000402452.5 ENST00000409241.5 ENST00000683101.1 |
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| CDS TCA 72 bp | GTGAAAGAAGCCCGTATCGAAAGCTTACATGCTATATaGTTCCATCTGTGTGACATTTTCAAAAAGACAAAA | + |
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Preference number: 6 (lower is better) Translates to: VKEARIESLHAI*FHLCDIFKKTK Trigger: TTTTGTCTTTTTGAAAATGTCACACAGATGGAATCATATAGCATGTAAGCTTTCGATACGGGCTTCTTTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000683101.1 |
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| CDS GCA 72 bp | AACATTTATTTTGGTGATCTTTACTCAGACCGTAGCTaGAAACAACATGAGGAACAAGTGTCTGCTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: NIYFGDLYSDRS*KQHEEQVSANF Trigger: AAAATTAGCAGACACTTGTTCCTCATGTTGTTTGCAGCTACGGTCTGAGTAAAGATCACCAAAATAAATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683101.1 |
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