Pregenerated sensors for RAD21 (Homo sapiens)
Ensembl gene IDs: ENSG00000164754Ensembl transcript IDs: ENST00000297338.7, ENST00000517485.5, ENST00000517749.1, ENST00000519837.5, ENST00000520992.5, ENST00000522699.1, ENST00000523986.5
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCTCCGCAGCCCAGGGTTTCCCCGGCCTCCTGGGGGACGTGAGATaGACCTGCAGGGTAACAGCCTTTGTAGATCTCAGAATGGATCAG | + |
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Preference number: 5 (lower is better) Translates to: PSAAQGFPGLLGDVR*TCRVTAFVDLRMDQ Trigger: CTGATCCATTCTGAGATCTACAAAGGCTGTTACCCTGCAGGTCCATCTCACGTCCCCCAGGAGGCCGGGGAAACCCTGGGCTGCGGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000519837.5 ENST00000522699.1 |
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| CDS TCA 90 bp | GTAGATCTCAGAATGGATCAGAATCATTTGTTACCGAACAAGCGATaGTGCGGGCCCAAGCTGCATGGGTCCGGGCCGAGGGCGGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: VDLRMDQNHLLPNKR*CGPKLHGSGPRAGP Trigger: CGGGCCCGCCCTCGGCCCGGACCCATGCAGCTTGGGCCCGCATCATCGCTTGTTCGGTAACAAATGATTCTGATCCATTCTGAGATCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520992.5 |
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| CDS GCA 90 bp | GCAGCCCAGGGTTTCCCCGGCCTCCTGGGGGACGTGAGATGGACCTaGAGGGTAACAGCCTTTGTAGATCTCAGAATGGATCAGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: AAQGFPGLLGDVRWT*RVTAFVDLRMDQNH Trigger: ATGATTCTGATCCATTCTGAGATCTACAAAGGCTGTTACCCTGCAGGTCCATCTCACGTCCCCCAGGAGGCCGGGGAAACCCTGGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000519837.5 ENST00000522699.1 |
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| CDS CCA 90 bp | AGGAAAGACTGCACCGACTCCCAGAACATATTCTCTCACTCCGAGTaGACTGTCTATATCCTGTTGCTCTTCTTCCTCTGGACTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: RKDCTDSQNIFSHSE*TVYILLLFFLWTHS Trigger: GGAATGAGTCCAGAGGAAGAAGAGCAACAGGATATAGACAGTCCACTCGGAGTGAGAGAATATGTTCTGGGAGTCGGTGCAGTCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS TCA 90 bp | ATAAGGATGCTATCTACACACACTATGTGGTCTGTGGACTGCTGCTaGTCATGGAGGTTTTGGTTACTGGCCCCTCTTAAAGAACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: IRMLSTHTMWSVDCC*SWRFWLLAPLKELQ Trigger: CTGAAGTTCTTTAAGAGGGGCCAGTAACCAAAACCTCCATGATCAGCAGCAGTCCACAGACCACATAGTGTGTGTAGATAGCATCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517749.1 |
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| CDS GCA 90 bp | TGGAGCACTCTAAAGCAATACTATTCAAAAAGAGTCAGGAAAGACTaGACCGACTCCCAGAACATATTCTCTCACTCCGAGTGGACTGTC | + |
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Preference number: 5 (lower is better) Translates to: WSTLKQYYSKRVRKD*TDSQNIFSHSEWTV Trigger: GACAGTCCACTCGGAGTGAGAGAATATGTTCTGGGAGTCGGTGCAGTCTTTCCTGACTCTTTTTGAATAGTATTGCTTTAGAGTGCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS GCA 90 bp | CCTCTATGTGCAAGCAAACATTTGGCTGAAAGTATGCTTCTATATTaGGCTATAAGGATGCTATCTACACACACTATGTGGTCTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: PLCASKHLAESMLLY*AIRMLSTHTMWSVD Trigger: GTCCACAGACCACATAGTGTGTGTAGATAGCATCCTTATAGCGCAATATAGAAGCATACTTTCAGCCAAATGTTTGCTTGCACATAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517749.1 |
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| CDS CCA 90 bp | CAAATAATAAATCAGAACCAACTTCAGAGTCAAGGATGCTCACTCTaGAGCACTCTAAAGCAATACTATTCAAAAAGAGTCAGGAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: QIINQNQLQSQGCSL*STLKQYYSKRVRKD Trigger: GTCTTTCCTGACTCTTTTTGAATAGTATTGCTTTAGAGTGCTCCAGAGTGAGCATCCTTGACTCTGAAGTTGGTTCTGATTTATTATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS GCA 90 bp | AATGTTTGCCAAATAATAAATCAGAACCAACTTCAGAGTCAAGGATaGTCACTCTGGAGCACTCTAAAGCAATACTATTCAAAAAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: NVCQIINQNQLQSQG*SLWSTLKQYYSKRV Trigger: GACTCTTTTTGAATAGTATTGCTTTAGAGTGCTCCAGAGTGAGCATCCTTGACTCTGAAGTTGGTTCTGATTTATTATTTGGCAAACATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS TCA 90 bp | GATACTTTAAAAGGCCTCCCTAAATACCACTTGCTACTGACTGTATaGATACCTTCAAATGACTTAATGGATAGATTTGCTTACTTACAG | + |
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Preference number: 5 (lower is better) Translates to: DTLKGLPKYHLLLTV*IPSNDLMDRFAYLQ Trigger: CTGTAAGTAAGCAAATCTATCCATTAAGTCATTTGAAGGTATTCATACAGTCAGTAGCAAGTGGTATTTAGGGAGGCCTTTTAAAGTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS CCA 72 bp | AAAACCGAACAAGCGATGATGCGGGCCCAAGCTGCATaGGTCCGGGCCGAGGGCGGGCCCGGGGCGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: KTEQAMMRAQAA*VRAEGGPGAKG Trigger: CCCCTTCGCCCCGGGCCCGCCCTCGGCCCGGACCCATGCAGCTTGGGCCCGCATCATCGCTTGTTCGGTTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517485.5 |
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| CDS CCA 72 bp | GCCCAGGGTTTCCCCGGCCTCCTGGGGGACGTGAGATaGACCTGCAGGGTAACAGCCTTTGTAGATCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: AQGFPGLLGDVR*TCRVTAFVDLR Trigger: TCTGAGATCTACAAAGGCTGTTACCCTGCAGGTCCATCTCACGTCCCCCAGGAGGCCGGGGAAACCCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000519837.5 ENST00000522699.1 |
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| CDS TCA 72 bp | AGAATGGATCAGAATCATTTGTTACCGAACAAGCGATaGTGCGGGCCCAAGCTGCATGGGTCCGGGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: RMDQNHLLPNKR*CGPKLHGSGPR Trigger: CCTCGGCCCGGACCCATGCAGCTTGGGCCCGCATCATCGCTTGTTCGGTAACAAATGATTCTGATCCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520992.5 |
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| CDS CCA 72 bp | TGCACCGACTCCCAGAACATATTCTCTCACTCCGAGTaGACTGTCTATATCCTGTTGCTCTTCTTCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CTDSQNIFSHSE*TVYILLLFFLW Trigger: CCAGAGGAAGAAGAGCAACAGGATATAGACAGTCCACTCGGAGTGAGAGAATATGTTCTGGGAGTCGGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS TCA 72 bp | TCTTCAATAATGGGCTCATCGATAACATCACGCTGCTaGTGCTGCTGTTGCTGGTCCTCTCTAGGAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSIMGSSITSRC*CCCCWSSLGTS Trigger: AGAGGTTCCTAGAGAGGACCAGCAACAGCAGCATCAGCAGCGTGATGTTATCGATGAGCCCATTATTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297338.7 |
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| CDS CAA 90 bp | TCCCAGAACATATTCTCTCACTCCGAGTGGACTGTCTATATCCTGTaGCTCTTCTTCCTCTGGACTCATTCCTTACCATTTTCTGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SQNIFSHSEWTVYIL*LFFLWTHSLPFSVK Trigger: TTTGACAGAAAATGGTAAGGAATGAGTCCAGAGGAAGAAGAGCAACAGGATATAGACAGTCCACTCGGAGTGAGAGAATATGTTCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS GCA 72 bp | CTAAAGCAATACTATTCAAAAAGAGTCAGGAAAGACTaGACCGACTCCCAGAACATATTCTCTCACTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LKQYYSKRVRKD*TDSQNIFSHSE Trigger: CTCGGAGTGAGAGAATATGTTCTGGGAGTCGGTGCAGTCTTTCCTGACTCTTTTTGAATAGTATTGCTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS CAA 72 bp | GCCCTAAACCAAACCCTACTATTTCCTCCTTCATACTaGCTTAGCTTTCCTATCCTAGCTGAACTCAATGGT | + |
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Preference number: 6 (lower is better) Translates to: ALNQTLLFPPSY*LSFPILAELNG Trigger: ACCATTGAGTTCAGCTAGGATAGGAAAGCTAAGCAAGTATGAAGGAGGAAATAGTAGGGTTTGGTTTAGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS CAA 90 bp | GATTGGAAAGCCCTAAACCAAACCCTACTATTTCCTCCTTCATACTaGCTTAGCTTTCCTATCCTAGCTGAACTCAATGGTAGTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: DWKALNQTLLFPPSY*LSFPILAELNGSQS Trigger: ACTTTGACTACCATTGAGTTCAGCTAGGATAGGAAAGCTAAGCAAGTATGAAGGAGGAAATAGTAGGGTTTGGTTTAGGGCTTTCCAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS GCA 72 bp | GCAAGCAAACATTTGGCTGAAAGTATGCTTCTATATTaGGCTATAAGGATGCTATCTACACACACTATGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASKHLAESMLLY*AIRMLSTHTMW Trigger: CCACATAGTGTGTGTAGATAGCATCCTTATAGCGCAATATAGAAGCATACTTTCAGCCAAATGTTTGCTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517749.1 |
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| CDS CCA 72 bp | AATCAGAACCAACTTCAGAGTCAAGGATGCTCACTCTaGAGCACTCTAAAGCAATACTATTCAAAAAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: NQNQLQSQGCSL*STLKQYYSKRV Trigger: GACTCTTTTTGAATAGTATTGCTTTAGAGTGCTCCAGAGTGAGCATCCTTGACTCTGAAGTTGGTTCTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS CAA 72 bp | CTAAAACTGCCTAGTACTGAAGGTGTGCAGGAATGTTaGCCAAATAATAAATCAGAACCAACTTCAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LKLPSTEGVQEC*PNNKSEPTSES Trigger: TGACTCTGAAGTTGGTTCTGATTTATTATTTGGCAAACATTCCTGCACACCTTCAGTACTAGGCAGTTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS TCA 72 bp | AAAGGCCTCCCTAAATACCACTTGCTACTGACTGTATaGATACCTTCAAATGACTTAATGGATAGATTTGCT | + |
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Preference number: 6 (lower is better) Translates to: KGLPKYHLLLTV*IPSNDLMDRFA Trigger: AGCAAATCTATCCATTAAGTCATTTGAAGGTATTCATACAGTCAGTAGCAAGTGGTATTTAGGGAGGCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS TCA 72 bp | AAAGAAACTAAAGAATTACCAGAAGGAGGGTGGTTATaGAAGTCACCTACTCATTACTGTGTTCCTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: KETKELPEGGWL*KSPTHYCVPIP Trigger: AGGAATAGGAACACAGTAATGAGTAGGTGACTTTCATAACCACCCTCCTTCTGGTAATTCTTTAGTTTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS GCA 72 bp | CAAATAATAAATCAGAACCAACTTCAGAGTCAAGGATaGTCACTCTGGAGCACTCTAAAGCAATACTATTCA | + |
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Preference number: 6 (lower is better) Translates to: QIINQNQLQSQG*SLWSTLKQYYS Trigger: TGAATAGTATTGCTTTAGAGTGCTCCAGAGTGAGCATCCTTGACTCTGAAGTTGGTTCTGATTTATTATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS CAA 90 bp | AAAAGCCTCCCTTTGCACAAATTCATTTATTCTATGGACTTAAGATaGGAAAGCCCTAAACCAAACCCTACTATTTCCTCCTTCATACTT | + |
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Preference number: 6 (lower is better) Translates to: KSLPLHKFIYSMDLR*ESPKPNPTISSFIL Trigger: AAGTATGAAGGAGGAAATAGTAGGGTTTGGTTTAGGGCTTTCCAATCTTAAGTCCATAGAATAAATGAATTTGTGCAAAGGGAGGCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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| CDS CAA 72 bp | TTTCCTATCCTAGCTGAACTCAATGGTAGTCAAAGTTaGAATGAAGCAGACAGATACTGCTTTACATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FPILAELNGSQS*NEADRYCFTFS Trigger: AGAAAATGTAAAGCAGTATCTGTCTGCTTCATTCAAACTTTGACTACCATTGAGTTCAGCTAGGATAGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523986.5 |
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