RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAD18 (Homo sapiens)

Ensembl gene IDs: ENSG00000070950

Ensembl transcript IDs: ENST00000264926.7, ENST00000413832.1, ENST00000415439.5, ENST00000418463.5, ENST00000421052.5, ENST00000427329.5, ENST00000429790.1, ENST00000469793.1, ENST00000495087.5

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACAGGAAGGCAGGGCTGCCCTAGCACTTGGCAGGTTTGCATCTTaGGGCTATATCGGGGATGGCGTCCTAGGCAAGGTAGGACTTTCC +
Preference number: 1 (lower is better)
Translates to: GQEGRAALALGRFAS*GYIGDGVLGKVGLS
Trigger: GGAAAGTCCTACCTTGCCTAGGACGCCATCCCCGATATAGCCCCAAGATGCAAACCTGCCAAGTGCTAGGGCAGCCCTGCCTTCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 90 bp CTGAAATGGACAGGAAGGCAGGGCTGCCCTAGCACTTGGCAGGTTTaGATCTTGGGGCTATATCGGGGATGGCGTCCTAGGCAAGGTAGG +
Preference number: 1 (lower is better)
Translates to: LKWTGRQGCPSTWQV*ILGLYRGWRPRQGR
Trigger: CCTACCTTGCCTAGGACGCCATCCCCGATATAGCCCCAAGATGCAAACCTGCCAAGTGCTAGGGCAGCCCTGCCTTCCTGTCCATTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 90 bp CGGCCTGGCATACTAGGCCATCTAAAGTGCATCCAGCAGCTCACCTaGACCCCCACAAACCATAAGCATCACTGCCATTCTGAGCTGATG +
Preference number: 1 (lower is better)
Translates to: RPGILGHLKCIQQLT*TPTNHKHHCHSELM
Trigger: CATCAGCTCAGAATGGCAGTGATGCTTATGGTTTGTGGGGGTGCAGGTGAGCTGCTGGATGCACTTTAGATGGCCTAGTATGCCAGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 90 bp CTGGCAGATTCCGTGTCTGGTGAGGACTGCTCTCTGCTTCCAAGATaGTGTGTTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTC +
Preference number: 1 (lower is better)
Translates to: LADSVSGEDCSLLPR*CVVAESSRGNEDCV
Trigger: GACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGGAATCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 90 bp CAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTaGATCGGTACTTACACACACCAAGGATGTGAACTGACATCCCGC +
Preference number: 1 (lower is better)
Translates to: QQPSWSCCNTGMVVA*IGTYTHQGCELTSR
Trigger: GCGGGATGTCAGTTCACATCCTTGGTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 90 bp GCAGTATCTTGTGACGGCAGCCCTGGCAAACTAATCCATGAGGGTTaGGTGTTTAGCCTCATCCCTGGCCTCCACCCATTGATACTGGTA +
Preference number: 1 (lower is better)
Translates to: AVSCDGSPGKLIHEG*VFSLIPGLHPLILV
Trigger: TACCAGTATCAATGGGTGGAGGCCAGGGATGAGGCTAAACACCCAACCCTCATGGATTAGTTTGCCAGGGCTGCCGTCACAAGATACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 90 bp AAGTCCAAGATCAAGGCACTGGCAGATTCCGTGTCTGGTGAGGACTaGTCTCTGCTTCCAAGATGGTGTGTTGTTGCTGAGTCCTCCAGA +
Preference number: 1 (lower is better)
Translates to: KSKIKALADSVSGED*SLLPRWCVVAESSR
Trigger: TCTGGAGGACTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGGAATCTGCCAGTGCCTTGATCTTGGACTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 90 bp TTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATaGTGGTGGCGTGCATCGGTACTTACACACACCAAGGATGTGAAC +
Preference number: 1 (lower is better)
Translates to: LTSGNNHHGAAVTQA*WWRASVLTHTKDVN
Trigger: GTTCACATCCTTGGTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 90 bp ACAGGTCTAACAAACAACTACATTAACCTCGGGCAACAACCATCATaGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACT +
Preference number: 1 (lower is better)
Translates to: TGLTNNYINLGQQPS*SCCNTGMVVACIGT
Trigger: AGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGTTAGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 90 bp TATTTCTCACAGGTATGGAGGCTGGTAAGTCCAAGATCAAGGCACTaGCAGATTCCGTGTCTGGTGAGGACTGCTCTCTGCTTCCAAGAT +
Preference number: 1 (lower is better)
Translates to: YFSQVWRLVSPRSRH*QIPCLVRTALCFQD
Trigger: ATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGGAATCTGCCAGTGCCTTGATCTTGGACTTACCAGCCTCCATACCTGTGAGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 90 bp CTAACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTaGTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACA +
Preference number: 1 (lower is better)
Translates to: LTNNYINLGQQPSWS*CNTGMVVACIGTYT
Trigger: TGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 90 bp TGCATCCAGCAGCTCACCTGCACCCCCACAAACCATAAGCATCACTaGCATTCTGAGCTGATGTTGATGGGAGATGTTATAACTTTGAGG +
Preference number: 1 (lower is better)
Translates to: CIQQLTCTPTNHKHH*HSELMLMGDVITLR
Trigger: CCTCAAAGTTATAACATCTCCCATCAACATCAGCTCAGAATGGCAGTGATGCTTATGGTTTGTGGGGGTGCAGGTGAGCTGCTGGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 90 bp ACCATGAGTGGAAGCCAAGGAGAGAGGCCGAAGAAGAAACCCTACTaGTCTTGGACTTCCAGCCTCCAGAATTCTGAGAATACACATTTC +
Preference number: 1 (lower is better)
Translates to: TMSGSQGERPKKKPY*SWTSSLQNSENTHF
Trigger: GAAATGTGTATTCTCAGAATTCTGGAGGCTGGAAGTCCAAGATCAGTAGGGTTTCTTCTTCGGCCTCTCTCCTTGGCTTCCACTCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 90 bp AGGCATGGTGGTGGCGTGCATCGGTACTTACACACACCAAGGATGTaGACTGACATCCCGCCTTTCCAAAAACAAACATTTAACTCAACT +
Preference number: 1 (lower is better)
Translates to: RHGGGVHRYLHTPRM*TDIPPFQKQTFNST
Trigger: AGTTGAGTTAAATGTTTGTTTTTGGAAAGGCGGGATGTCAGTTCACATCCTTGGTGTGTGTAAGTACCGATGCACGCCACCACCATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 90 bp AGTGTCAGCACAGTGACAGACATAGATAACCAAATATTTGCTGAATaGACTCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCC +
Preference number: 1 (lower is better)
Translates to: SVSTVTDIDNQIFAE*THVPTFPILGLTAP
Trigger: GGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGAGTTCATTCAGCAAATATTTGGTTATCTATGTCTGTCACTGTGCTGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 90 bp TACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTaGGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTGAAGATCGT +
Preference number: 1 (lower is better)
Translates to: YACFLVQSQHFQRLL*GDSVLDLFLCLEDR
Trigger: ACGATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CCA 90 bp TGTCAATTAACAACGGATGTGGCTAAACAATCCCTGTTAATGAATTaGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGCCCA +
Preference number: 1 (lower is better)
Translates to: CQLTTDVAKQSLLMN*PQPLHSPCVGTVGP
Trigger: TGGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTGTTTAGCCACATCCGTTGTTAATTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
3UTR TCA 90 bp CAAAGTGCCAAAGAGTCTACCTCCTCTGCAAAGCTGGTACCTGTGTaGAATGTCAGTATTTTTAGAGAGAGATGTTTTAGAGGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: QSAKESTSSAKLVPV*NVSIFRERCFRGRR
Trigger: CCTCCTGCCTCTAAAACATCTCTCTCTAAAAATACTGACATTTCACACAGGTACCAGCTTTGCAGAGGAGGTAGACTCTTTGGCACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 90 bp TCTTCTCTGTCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTTGATTaGGAAAAGTGGTTTGTTACTGAGGTCATATTATCTTCCTGTCCC +
Preference number: 1 (lower is better)
Translates to: SSLSGSNSSGESSFD*EKWFVTEVILSSCP
Trigger: GGGACAGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAGAGGAATTGGAACCTGACAGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CCA 90 bp AAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCTTaGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTG +
Preference number: 1 (lower is better)
Translates to: KSQQKPTLIPITLVS*FNLSTFSGSCAAIL
Trigger: CAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CCA 90 bp TGTATTTTGGAATCAAAGGAGTCAGAAGATGCATGCATCAGTTTCTaGGTGTCCATTTGTGCTGCCAGAAGAAAATACCACAGTCTGGGT +
Preference number: 1 (lower is better)
Translates to: CILESKESEDACISF*VSICAARRKYHSLG
Trigger: ACCCAGACTGTGGTATTTTCTTCTGGCAGCACAAATGGACACCCAGAAACTGATGCATGCATCTTCTGACTCCTTTGATTCCAAAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 90 bp AACTCAACTGTTTCTTGCAATAAAGAAGTTGAAAGAATCCTTTTGTaGGGCTGGATTCTCCATGGAAGAGAAGGAGAATGGCCTAAGGAC +
Preference number: 1 (lower is better)
Translates to: NSTVSCNKEVERILL*GWILHGREGEWPKD
Trigger: GTCCTTAGGCCATTCTCCTTCTCTTCCATGGAGAATCCAGCCTCACAAAAGGATTCTTTCAACTTCTTTATTGCAAGAAACAGTTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 90 bp CTTGGGAGTTCCTTTACATTACAGGTTTCTCAGTCTTGGCACAACTaGCATGTTAGACTGGATAATTCTTTACTGTGGAGTGTTGTAGTC +
Preference number: 1 (lower is better)
Translates to: LGSSFTLQVSQSWHN*HVRLDNSLLWSVVV
Trigger: GACTACAACACTCCACAGTAAAGAATTATCCAGTCTAACATGTCAGTTGTGCCAAGACTGAGAAACCTGTAATGTAAAGGAACTCCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 90 bp CTGGAACTATTGCATGAATCTGATTCTGATGAAGAAAGAACTTCTTaGATATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCC +
Preference number: 1 (lower is better)
Translates to: LELLHESDSDEERTS*ISIQLEESSSLSGS
Trigger: GGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGATATTCAAGAAGTTCTTTCTTCATCAGAATCAGATTCATGCAATAGTTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR TCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCAGCCGCAGTGCACGTaGCAGAGCAGCGGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRQPQCT*QSSGEE
Trigger: CTCCTCACCGCTGCTCTGTCACGTGCACTGCGGCTG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 90 bp TGGACAGGAAGGCAGGGCTGCCCTAGCACTTGGCAGGTTTGCATCTaGGGGCTATATCGGGGATGGCGTCCTAGGCAAGGTAGGACTTTC +
Preference number: 2 (lower is better)
Translates to: WTGRQGCPSTWQVCI*GLYRGWRPRQGRTF
Trigger: GAAAGTCCTACCTTGCCTAGGACGCCATCCCCGATATAGCCCCAAGATGCAAACCTGCCAAGTGCTAGGGCAGCCCTGCCTTCCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGTGTGTTTGGGTTGGGTaGTGGCAGAGGGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRCVWVG*WQRGGS
Trigger: ACTCCCACCCCTCTGCCATCACCCAACCCAAACACA...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 90 bp CCGTGTCTGGTGAGGACTGCTCTCTGCTTCCAAGATGGTGTGTTGTaGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGC +
Preference number: 2 (lower is better)
Translates to: PCLVRTALCFQDGVL*LSPPEGTKTVSSCG
Trigger: GCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGGCTGTAACACAGGCATaGTGGTGGCGTGCATCGGTA +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRAVTQA*WWRASV
Trigger: TACCGATGCACGCCACCACCATGCCTGTGTTACAGC...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 90 bp ATCCATGAGGGTTGGGTGTTTAGCCTCATCCCTGGCCTCCACCCATaGATACTGGTAGTACCCCTCACCACCCTCCACCTCCAAAAGTGT +
Preference number: 2 (lower is better)
Translates to: IHEGWVFSLIPGLHP*ILVVPLTTLHLQKC
Trigger: ACACTTTTGGAGGTGGAGGGTGGTGAGGGGTACTACCAGTATCAATGGGTGGAGGCCAGGGATGAGGCTAAACACCCAACCCTCATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGACACAGGCATGGTGGTaGCGTGCATCGGTACTTACA +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRTQAWW*RASVLT
Trigger: TGTAAGTACCGATGCACGCCACCACCATGCCTGTGT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR GCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGAGAGTCTACCTCCTCTaGAAAGCTGGTACCTGTGTG +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRRVYLL*KAGTCV
Trigger: CACACAGGTACCAGCTTTGCAGAGGAGGTAGACTCT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 90 bp ATTCCGTGTCTGGTGAGGACTGCTCTCTGCTTCCAAGATGGTGTGTaGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGT +
Preference number: 2 (lower is better)
Translates to: IPCLVRTALCFQDGV*LLSPPEGTKTVSSC
Trigger: ACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTCACACACCAAGGATGTaGACTGACATCCCGCCTTTC +
Preference number: 2 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFHTPRM*TDIPPF
Trigger: GAAAGGCGGGATGTCAGTTCACATCCTTGGTGTGTG...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTGTAACACAGGCATGGTaGTGGCGTGCATCGGTACTT +
Preference number: 2 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFVTQAW*WRASVL
Trigger: AAGTACCGATGCACGCCACCACCATGCCTGTGTTAC...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGTGTATTCTGAATATCTaGACCTGGGGATACCCAGAA +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRCILNI*TWGYPE
Trigger: TTCTGGGTATCCCCAGGTTCAGATATTCAGAATACA...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACGGAAGAGAAGGAGAATaGCCTAAGGACATTCTGAAA +
Preference number: 2 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHGREGE*PKDILK
Trigger: TTTCAGAATGTCCTTAGGCCATTCTCCTTCTCTTCC...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTAGGCTGGATTCTCCATaGAAGAGAAGGAGAATGGCC +
Preference number: 2 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFRLDSP*KRRRMA
Trigger: GGCCATTCTCCTTCTCTTCCATGGAGAATCCAGCCT...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAGACGAGAGTAGAGGATaGAAGGACGGCCTGGCATAC +
Preference number: 2 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSDESRG*KDGLAY
Trigger: GTATGCCAGGCCGTCCTTTCATCCTCTACTCTCGTC...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCTTGTATCTGTATTCTaGATATCTGAACCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRLVSVF*ISEPGD
Trigger: ATCCCCAGGTTCAGATATTCAGAATACAGATACAAG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGGAGGCAGGAGGCAACTaGCCAAGTAAGGATATTTTG +
Preference number: 2 (lower is better)
Translates to: YTSKPGKHTPISTWNTAREAGGN*PSKDIL
Trigger: CAAAATATCCTTACTTGGTCAGTTGCCTCCTGCCTC...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR GCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCACTAGGCCATCTAAAGTaGATCCAGCAGCTCACCTGC +
Preference number: 2 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSLGHLK*IQQLTC
Trigger: GCAGGTGAGCTGCTGGATGCACTTTAGATGGCCTAG...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCAACATATGCAAGCATaGACTTGTATCTGTATTCTG +
Preference number: 2 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRQHMQA*TCICIL
Trigger: CAGAATACAGATACAAGTCCATGCTTGCATATGTTG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR GCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTCAACCATCATGGAGCTaGTGTAACACAGGCATGGTG +
Preference number: 2 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLQPSWS*CNTGMV
Trigger: CACCATGCCTGTGTTACAGCAGCTCCATGATGGTTG...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR GCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGATGCTGGCTCTGAAATaGCAGAGAGGCATTAAGAAC +
Preference number: 2 (lower is better)
Translates to: YTSKPGKHTPISTWNTARMLALK*QRGIKN
Trigger: GTTCTTAATGCCTCTCTGGCATTTCAGAGCCAGCAT...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTCTAATCAATGCATTTaGAAAGTCAGCAAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: LVQSQHFQRLLCGDSVLDSNQCI*KVSKSP
Trigger: TGGGCTTTTGCTGACTTTTCAAATGCATTGATTAGA...GTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR TCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTACCAAGGATGTGAACTaGCATCCCGCCTTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSTKDVN*HPAFPK
Trigger: TTTTGGAAAGGCGGGATGTCAGTTCACATCCTTGGT...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTGTTTCTAAGTTATTGTaGCTTTGTGACTGTCGTAGC +
Preference number: 2 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGVSKLL*LCDCRS
Trigger: GCTACGACAGTCACAAAGTCACAATAACTTAGAAAC...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTAAGGAAAGAACATGGTaGTTAATGCTGTCCCCCTGG +
Preference number: 2 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLKERTW*LMLSPW
Trigger: CCAGGGGGACAGCATTAATCACCATGTTCTTTCCTT...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATGAGTCCAGCTTTGATTaGGAAAAGTGGTTTGTTACT +
Preference number: 2 (lower is better)
Translates to: YACFLVQSQHFQRLLCGDESSFD*EKWFVT
Trigger: AGTAACAAACCACTTTTCTCAATCAAAGCTGGACTC...ATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR GCA 90 bp CTGATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGTGTCTCTTTGGTCTTTaGAGCAGGGCTCGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LIKKLSINLLPCFKDCLECLFGL*SRARLF
Trigger: AAAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACA...CTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
3UTR-3UTR CCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACACCTCCTCTGCAAAGCTaGTACCTGTGTGAAATGTCA +
Preference number: 2 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTPPLQS*YLCEMS
Trigger: TGACATTTCACACAGGTACCAGCTTTGCAGAGGAGG...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGGTTCTAGATGATCTTTaGCCACCTTTGTATTCCCAG +
Preference number: 2 (lower is better)
Translates to: YTSKPGKHTPISTWNTARVLDDL*PPLYSQ
Trigger: CTGGGAATACAAAGGTGGCCAAAGATCATCTAGAAC...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 90 bp GAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCTaGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCT +
Preference number: 2 (lower is better)
Translates to: EKSAKAHINSYYACF*VQSQHFQRLLCGDS
Trigger: AGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR TCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGAAAGAATCCTTTTGTaGGGCTGGATTCTCCATGGA +
Preference number: 2 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTERILL*GWILHG
Trigger: TCCATGGAGAATCCAGCCTCACAAAAGGATTCTTTC...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGAACCATTGTTCTAGATaGTCTTTGGCCACCTTTGTA +
Preference number: 2 (lower is better)
Translates to: YTSKPGKHTPISTWNTARNHCSR*SLATFV
Trigger: TACAAAGGTGGCCAAAGATCATCTAGAACAATGGTT...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR GCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTCAAACCAAATCCCTGTaGCAAAGTGCCAAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLQTKSL*QSAKES
Trigger: AGACTCTTTGGCACTTTGGCACAGGGATTTGGTTTG...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR GCA 90 bp CTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTCTGAACTGGAACTATTaGATGAATCTGATTCTGATG +
Preference number: 2 (lower is better)
Translates to: LSTFSGSCAAILSWTYFCLNWNY*MNLILM
Trigger: CATCAGAATCAGATTCATGCAATAGTTCCAGTTCAG...ACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CAA 90 bp GTTCCAATTCCTCTGGGGAGTCCAGCTTTGATTGAGAAAAGTGGTTaGTTACTGAGGTCATATTATCTTCCTGTCCCATGCATACAGAAG +
Preference number: 2 (lower is better)
Translates to: VPIPLGSPALIEKSG*LLRSYYLPVPCIQK
Trigger: CTTCTGTATGCATGGGACAGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAGAGGAATTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CAA 90 bp GTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTaGGACTTATTTCTGTGTCTTGAAGATCGTTTTTATGTGATGCTT +
Preference number: 2 (lower is better)
Translates to: VQSQHFQRLLCGDSV*DLFLCLEDRFYVML
Trigger: AAGCATCACATAAAAACGATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CAA 90 bp TATTACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTaGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTGAAGAT +
Preference number: 2 (lower is better)
Translates to: YYACFLVQSQHFQRL*CGDSVLDLFLCLED
Trigger: ATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR TCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCACGGTATCTCAGAATGTaGCAGTATTTAGAGATAGGG +
Preference number: 2 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSRYLRM*QYLEIG
Trigger: CCCTATCTCTAAATACTGTCACATTCTGAGATACCG...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAGTTGTCTATCCCTGTTaGCACATCAGTCTTTACCAT +
Preference number: 2 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSVVYPC*HISLYH
Trigger: ATGGTAAAGACTGATGTGTCAACAGGGATAGACAAC...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTTTAATGCTGTCCCCCTaGACTGATTTTCAAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLLMLSP*TDFQAF
Trigger: GAAAGCTTGAAAATCAGTCCAGGGGGACAGCATTAA...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 90 bp TTGTTTGACATGCTCACTTACCTCACATCAGTTCTGCCGATAGATTaGGTAAGTGGTGCTTTTAGTTTCCTTAATGCACCCCTCAGGATT +
Preference number: 2 (lower is better)
Translates to: LFDMLTYLTSVLPID*VSGAFSFLNAPLRI
Trigger: AATCCTGAGGGGTGCATTAAGGAAACTAAAAGCACCACTTACCAAATCTATCGGCAGAACTGATGTGAGGTAAGTGAGCATGTCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 90 bp AATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTaGATTGAGAAAAGTGGTTTGTTACTGAGGTCATATTATCTTCCT +
Preference number: 2 (lower is better)
Translates to: NPLLCQVPIPLGSPA*IEKSGLLLRSYYLP
Trigger: AGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR CCA 90 bp CTGATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGAAGAAGCAGGAGATTTaGCTGGTGACTCTAAAGCAA +
Preference number: 2 (lower is better)
Translates to: LIKKLSINLLPCFKDCLEKKQEI*LVTLKQ
Trigger: TTGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTT...CTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
3UTR-3UTR TCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTTCTAATCAATGCATTTaGAAAGTCAGCAAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSSNQCI*KVSKSP
Trigger: TGGGCTTTTGCTGACTTTTCAAATGCATTGATTAGA...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAAAGCTGGTACCTGTGTaGAATGTCAGTATTTTTAGA +
Preference number: 2 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTKLVPV*NVSIFR
Trigger: TCTAAAAATACTGACATTTCACACAGGTACCAGCTT...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTTACTATCATCTCATTTaGAAGCTGATGTGTTTGGGT +
Preference number: 2 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSYYHLI*KLMCLG
Trigger: ACCCAAACACATCAGCTTTCAAATGAGATGATAGTA...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR TCA 90 bp ATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGAAAAGTGGTTTGTTACTaGGGTCATATTATCTTCCTG +
Preference number: 2 (lower is better)
Translates to: INTARRILFSVRFQFLWGKVVCY*GHIIFL
Trigger: CAGGAAGATAATATGACCTCAGTAACAAACCACTTT...TCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR GCA 90 bp ATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGATATCTTCCTGTCCCATaGATACAGAAGATAGCTTTT +
Preference number: 2 (lower is better)
Translates to: INTARRILFSVRFQFLWGYLPVP*IQKIAF
Trigger: AAAAGCTATCTTCTGTATGCATGGGACAGGAAGATA...TCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR TCA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTCAGGAGTATATACTTTaGCAGCAAGATTCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: IKKLSINLLPCFKDCLEAQEYIL*QQDSLK
Trigger: CTTCAAAGAATCTTGCTGTCAAAGTATATACTCCTG...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
3UTR CAA 90 bp ATAGTGCTCAATAAATGCTCTTTAGACCTTACTTTTCAGGTAGACTaGGGAGTTCCTTTACATTACAGGTTTCTCAGTCTTGGCACAACT +
Preference number: 2 (lower is better)
Translates to: IVLNKCSLDLTFQVD*GVPLHYRFLSLGTT
Trigger: AGTTGTGCCAAGACTGAGAAACCTGTAATGTAAAGGAACTCCCAAGTCTACCTGAAAAGTAAGGTCTAAAGAGCATTTATTGAGCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp ACAGGAAGGCAGGGCTGCCCTAGCACTTGGCAGGTTTaGATCTTGGGGCTATATCGGGGATGGCGTCCTAGG +
Preference number: 3 (lower is better)
Translates to: TGRQGCPSTWQV*ILGLYRGWRPR
Trigger: CCTAGGACGCCATCCCCGATATAGCCCCAAGATGCAAACCTGCCAAGTGCTAGGGCAGCCCTGCCTTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp GGCAGGGCTGCCCTAGCACTTGGCAGGTTTGCATCTTaGGGCTATATCGGGGATGGCGTCCTAGGCAAGGTA +
Preference number: 3 (lower is better)
Translates to: GRAALALGRFAS*GYIGDGVLGKV
Trigger: TACCTTGCCTAGGACGCCATCCCCGATATAGCCCCAAGATGCAAACCTGCCAAGTGCTAGGGCAGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CAA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGGCTGATGTGTTTGGGTaGGGTGATGGCAGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRADVFG*GDGRGV
Trigger: CACCCCTCTGCCATCACCCAACCCAAACACATCAGC...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp TGTGACGGCAGCCCTGGCAAACTAATCCATGAGGGTTaGGTGTTTAGCCTCATCCCTGGCCTCCACCCATTG +
Preference number: 3 (lower is better)
Translates to: CDGSPGKLIHEG*VFSLIPGLHPL
Trigger: CAATGGGTGGAGGCCAGGGATGAGGCTAAACACCCAACCCTCATGGATTAGTTTGCCAGGGCTGCCGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp ACTTGGCAGGTTTGCATCTTGGGGCTATATCGGGGATaGCGTCCTAGGCAAGGTAGGACTTTCCAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: TWQVCILGLYRG*RPRQGRTFQQG
Trigger: GCCCTGCTGGAAAGTCCTACCTTGCCTAGGACGCCATCCCCGATATAGCCCCAAGATGCAAACCTGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp CAGGTATGGAGGCTGGTAAGTCCAAGATCAAGGCACTaGCAGATTCCGTGTCTGGTGAGGACTGCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: QVWRLVSPRSRH*QIPCLVRTALC
Trigger: GCAGAGAGCAGTCCTCACCAGACACGGAATCTGCCAGTGCCTTGATCTTGGACTTACCAGCCTCCATACCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp ATGAAAGGACGGCCTGGCATACTAGGCCATCTAAAGTaGATCCAGCAGCTCACCTGCACCCCCACAAACCAT +
Preference number: 3 (lower is better)
Translates to: MKGRPGILGHLK*IQQLTCTPTNH
Trigger: ATGGTTTGTGGGGGTGCAGGTGAGCTGCTGGATGCACTTTAGATGGCCTAGTATGCCAGGCCGTCCTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp CACTGGCAGATTCCGTGTCTGGTGAGGACTGCTCTCTaGTTCCAAGATGGTGTGTTGTTGCTGAGTCCTCCA +
Preference number: 3 (lower is better)
Translates to: HWQIPCLVRTAL*FQDGVLLLSPP
Trigger: TGGAGGACTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGGAATCTGCCAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp GAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTaGCGGAAGGGATGGAAGGAAACAAAACCACTCCCT +
Preference number: 3 (lower is better)
Translates to: ESSRGNEDCVLM*RKGWKETKPLP
Trigger: AGGGAGTGGTTTTGTTTCCTTCCATCCCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp TCCGTGTCTGGTGAGGACTGCTCTCTGCTTCCAAGATaGTGTGTTGTTGCTGAGTCCTCCAGAGGGAACGAA +
Preference number: 3 (lower is better)
Translates to: SVSGEDCSLLPR*CVVAESSRGNE
Trigger: TTCGTTCCCTCTGGAGGACTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp TCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTaGATCGGTACTTACACACACCAAGGATGTGAACTG +
Preference number: 3 (lower is better)
Translates to: SWSCCNTGMVVA*IGTYTHQGCEL
Trigger: CAGTTCACATCCTTGGTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp AACTACATTAACCTCGGGCAACAACCATCATGGAGCTaGTGTAACACAGGCATGGTGGTGGCGTGCATCGGT +
Preference number: 3 (lower is better)
Translates to: NYINLGQQPSWS*CNTGMVVACIG
Trigger: ACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp ATCAAGGCACTGGCAGATTCCGTGTCTGGTGAGGACTaGTCTCTGCTTCCAAGATGGTGTGTTGTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: IKALADSVSGED*SLLPRWCVVAE
Trigger: CTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACACGGAATCTGCCAGTGCCTTGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTaGCGTGCATCGGTACTTACACACACCAAGGATGTG +
Preference number: 3 (lower is better)
Translates to: NHHGAAVTQAWW*RASVLTHTKDV
Trigger: CACATCCTTGGTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CAA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCAACGGAGACAGTCTTaGGAAGGGGAGGTCATAAAT +
Preference number: 3 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRQRRQS*EGEVIN
Trigger: ATTTATGACCTCCCCTTCCAAAGACTGTCTCCGTTG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp GACTGCTGTCCCTACAAGAAATCGGGACACCAGTCCTaGACAGTCATGTGCACACAGAGAAAAGACCATGCA +
Preference number: 3 (lower is better)
Translates to: DCCPYKKSGHQS*TVMCTQRKDHA
Trigger: TGCATGGTCTTTTCTCTGTGTGCACATGACTGTGCAGGACTGGTGTCCCGATTTCTTGTAGGGACAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp AACAACCATCATGGAGCTGCTGTAACACAGGCATGGTaGTGGCGTGCATCGGTACTTACACACACCAAGGAT +
Preference number: 3 (lower is better)
Translates to: NNHHGAAVTQAW*WRASVLTHTKD
Trigger: ATCCTTGGTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATaGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGC +
Preference number: 3 (lower is better)
Translates to: TNNYINLGQQPS*SCCNTGMVVAC
Trigger: GCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 72 bp GGAAGCCAAGGAGAGAGGCCGAAGAAGAAACCCTACTaGTCTTGGACTTCCAGCCTCCAGAATTCTGAGAAT +
Preference number: 3 (lower is better)
Translates to: GSQGERPKKKPY*SWTSSLQNSEN
Trigger: ATTCTCAGAATTCTGGAGGCTGGAAGTCCAAGATCAGTAGGGTTTCTTCTTCGGCCTCTCTCCTTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 72 bp ATGTGCACACAGAGAAAAGACCATGCAAGGACACCATaGGTGGAAGCCAAGGAGAGAGGCCGAAGAAGAAAC +
Preference number: 3 (lower is better)
Translates to: MCTQRKDHARTP*VEAKERGRRRN
Trigger: GTTTCTTCTTCGGCCTCTCTCCTTGGCTTCCACTCATGGTGTCCTTGCATGGTCTTTTCTCTGTGTGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CAA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTCCTACTTTCCCAATCTaGGGTCTCACCGCTCCCTCA +
Preference number: 3 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSPTFPI*GLTAPS
Trigger: TGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGG...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp CAGCTCACCTGCACCCCCACAAACCATAAGCATCACTaGCATTCTGAGCTGATGTTGATGGGAGATGTTATA +
Preference number: 3 (lower is better)
Translates to: QLTCTPTNHKHH*HSELMLMGDVI
Trigger: TATAACATCTCCCATCAACATCAGCTCAGAATGGCAGTGATGCTTATGGTTTGTGGGGGTGCAGGTGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR GCA 72 bp AGCGATCTCTTCTACAGAACGTGTCTCTTTGGTCTTTaGAGCAGGGCTCGCCTCTTTTTGAGGGCTGAATTT +
Preference number: 3 (lower is better)
Translates to: SDLFYRTCLFGL*SRARLFLRAEF
Trigger: AAATTCAGCCCTCAAAAAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTGTAGAAGAGATCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418463.5
3UTR-3UTR CAA 90 bp TCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTAGTGTCTCTTTGGTCTTaGCAGCAGGGCTCGCCTCTT +
Preference number: 3 (lower is better)
Translates to: SRNYPLTCSPALKTVWRLVSLWS*QQGSPL
Trigger: AAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACAC...TAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
3UTR-3UTR CAA 90 bp ACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTGCTGGGGAGTCCAGCTTaGATTGAGAAAAGTGGTTTG +
Preference number: 3 (lower is better)
Translates to: TFSGSCAAILSWTYFCVLLGSPA*IEKSGL
Trigger: CAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAG...CAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR CAA 90 bp AATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTACAGGAGAGGGCTCGCCTCTTTTaGAGGGCTGAATTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: NYPLTCSPALKTVWRLQERARLF*RAEFAF
Trigger: AAAAGCAAATTCAGCCCTCAAAAAGAGGCGAGCCCT...CTCCTGTAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418463.5
3UTR TCA 72 bp GGTGGCGTGCATCGGTACTTACACACACCAAGGATGTaGACTGACATCCCGCCTTTCCAAAAACAAACATTT +
Preference number: 3 (lower is better)
Translates to: GGVHRYLHTPRM*TDIPPFQKQTF
Trigger: AAATGTTTGTTTTTGGAAAGGCGGGATGTCAGTTCACATCCTTGGTGTGTGTAAGTACCGATGCACGCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 72 bp GTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTaGAGATCGTTTTTATGTGATGCTTCCCAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: VRRFCLGLISVS*RSFLCDASQAS
Trigger: GGAAGCCTGGGAAGCATCACATAAAAACGATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR GCA 72 bp TTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTaGGGCGATTCTGTCTTGGACTTATTTCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: FLVQSQHFQRLL*GDSVLDLFLCL
Trigger: AAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR CAA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCACTAGCCTTCTCTATGTaGTCTATCCCTGTTGACACA +
Preference number: 3 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSLAFSM*SIPVDT
Trigger: TGTGTCAACAGGGATAGACAACATAGAGAAGGCTAG...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CAA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTGAAGAAGCAGGAGATTaGGCTGGTGACTCTAAAGCA +
Preference number: 3 (lower is better)
Translates to: IKKLSINLLPCFKDCLEAEEAGD*AGDSKA
Trigger: TGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTTC...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
3UTR CCA 72 bp GAATCAAAGGAGTCAGAAGATGCATGCATCAGTTTCTaGGTGTCCATTTGTGCTGCCAGAAGAAAATACCAC +
Preference number: 3 (lower is better)
Translates to: ESKESEDACISF*VSICAARRKYH
Trigger: GTGGTATTTTCTTCTGGCAGCACAAATGGACACCCAGAAACTGATGCATGCATCTTCTGACTCCTTTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CCA 72 bp AGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTaGACTTATTTCTGTGTCTTGAAGATCGTTTTTATG +
Preference number: 3 (lower is better)
Translates to: STFSGSCAAILS*TYFCVLKIVFM
Trigger: CATAAAAACGATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR-3UTR CAA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTGTTCTGCCGATAGATTaGGTAAGTGGTGCTTTTAGT +
Preference number: 3 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLVLPID*VSGAFS
Trigger: ACTAAAAGCACCACTTACCAAATCTATCGGCAGAAC...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CAA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTTGTTGTCTATCCCTGTaGACACATCAGTCTTTACCA +
Preference number: 3 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLCCLSL*THQSLP
Trigger: TGGTAAAGACTGATGTGTCAACAGGGATAGACAACA...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 72 bp GGAAAGAACATGGTGATTAATGCTGTCCCCCTGGACTaGTTTTCAAGCTTTCTATGGCAAGAGTTTATAGGC +
Preference number: 3 (lower is better)
Translates to: GKNMVINAVPLD*FSSFLWQEFIG
Trigger: GCCTATAAACTCTTGCCATAGAAAGCTTGAAAATCAGTCCAGGGGGACAGCATTAATCACCATGTTCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR-3UTR CAA 90 bp ACATTAATTCCTATTACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTGCGGCGATTCTGTCTaGGACTTATTTCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: TLIPITLVSWFNLSTFSGCGDSV*DLFLCL
Trigger: AAGACACAGAAATAAGTCCAAGACAGAATCGCCGCA...GCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATAGGAATTAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR TCA 72 bp TCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTTGATTaGGAAAAGTGGTTTGTTACTGAGGTCATATTATCT +
Preference number: 3 (lower is better)
Translates to: SGSNSSGESSFD*EKWFVTEVILS
Trigger: AGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAGAGGAATTGGAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR TCA 72 bp ACAGTGACAGACATAGATAACCAAATATTTGCTGAATaGACTCATGTGCCTACTTTCCCAATCTTGGGTCTC +
Preference number: 3 (lower is better)
Translates to: TVTDIDNQIFAE*THVPTFPILGL
Trigger: GAGACCCAAGATTGGGAAAGTAGGCACATGAGTTCATTCAGCAAATATTTGGTTATCTATGTCTGTCACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 72 bp AGCAACATATGCAAGCATGGACTTGTATCTGTATTCTaGATATCTGAACCTGGGGATACCCAGAAATACACA +
Preference number: 3 (lower is better)
Translates to: SNICKHGLVSVF*ISEPGDTQKYT
Trigger: TGTGTATTTCTGGGTATCCCCAGGTTCAGATATTCAGAATACAGATACAAGTCCATGCTTGCATATGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 72 bp ATCAGGGCAGGAACTGTCTTTGTTTTGCACATTACTTaGCATATAGTCCTAATAGTTGAAGGAAGGAAGGAC +
Preference number: 3 (lower is better)
Translates to: IRAGTVFVLHIT*HIVLIVEGRKD
Trigger: GTCCTTCCTTCCTTCAACTATTAGGACTATATGTCAAGTAATGTGCAAAACAAAGACAGTTCCTGCCCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR TCA 72 bp TCCTTTACATTACAGGTTTCTCAGTCTTGGCACAACTaGCATGTTAGACTGGATAATTCTTTACTGTGGAGT +
Preference number: 3 (lower is better)
Translates to: SFTLQVSQSWHN*HVRLDNSLLWS
Trigger: ACTCCACAGTAAAGAATTATCCAGTCTAACATGTCAGTTGTGCCAAGACTGAGAAACCTGTAATGTAAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 72 bp AGGCAGGGCTGCCCTAGCACTTGGCAGGTTTGCATCTaGGGGCTATATCGGGGATGGCGTCCTAGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RQGCPSTWQVCI*GLYRGWRPRQG
Trigger: ACCTTGCCTAGGACGCCATCCCCGATATAGCCCCAAGATGCAAACCTGCCAAGTGCTAGGGCAGCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGGTCGCTCCCGAGGATaGTGGGGGTCAGCCACCCAC +
Preference number: 4 (lower is better)
Translates to: LSTFSGSCAAILSWTYFCGRSRG*WGSATH
Trigger: GTGGGTGGCTGACCCCCAGCATCCTCGGGAGCGACC...ACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CAA 72 bp GGTTGGGTGTTTAGCCTCATCCCTGGCCTCCACCCATaGATACTGGTAGTACCCCTCACCACCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GWVFSLIPGLHP*ILVVPLTTLHL
Trigger: GAGGTGGAGGGTGGTGAGGGGTACTACCAGTATCAATGGGTGGAGGCCAGGGATGAGGCTAAACACCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGCAGCCGCAGTGCACGTaGCAGAGCAGCGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRQPQCT*QSSGEE
Trigger: CTCCTCACCGCTGCTCTGTCACGTGCACTGCGGCTG...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGTCAGATCCGGCTCTGTaGCAGTCACACAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRSDPAL*QSHSKL
Trigger: CAACTTGCTGTGTGACTGTCACAGAGCCGGATCTGA...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGTGTTTGGGTTGGGTaGTGGCAGAGGGGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TLTSGNNHHGAAVTQAWWCVWVG*WQRGGS
Trigger: ACTCCCACCCCTCTGCCATCACCCAACCCAAACACA...CCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAGGTCGCTCCCGAGGATaGTGGGGGTCAGCCACCCAC +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSGRSRG*WGSATH
Trigger: GTGGGTGGCTGACCCCCAGCATCCTCGGGAGCGACC...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGGTGTCTGGTGAGGACTaGTCTCTGCTTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRVSGED*SLLPRW
Trigger: CCATCTTGGAAGCAGAGAGCAGTCCTCACCAGACAC...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACCAGAACGTGTCTCTTTaGTCTTTGCAGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHQNVSL*SLQQGS
Trigger: CGAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTG...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 72 bp GTGAGGACTGCTCTCTGCTTCCAAGATGGTGTGTTGTaGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VRTALCFQDGVL*LSPPEGTKTVS
Trigger: GGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAACACACCATCTTGGAAGCAGAGAGCAGTCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTAGGACGCTTAGCCTCTaGGGGATCTGGAGCGATCTC +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGRTLSL*GIWSDL
Trigger: GAGATCGCTCCAGATCCCTCAGAGGCTAAGCGTCCT...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATAGGACGCTTAGCCTCTaGGGGATCTGGAGCGATCTC +
Preference number: 4 (lower is better)
Translates to: YACFLVQSQHFQRLLCGDRTLSL*GIWSDL
Trigger: GAGATCGCTCCAGATCCCTCAGAGGCTAAGCGTCCT...ATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTCACACACCAAGGATGTaGACTGACATCCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NHHGAAVTQAWWWRASVLHTPRM*TDIPPF
Trigger: GAAAGGCGGGATGTCAGTTCACATCCTTGGTGTGTG...AAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTCATACGCATGGGCCCTaGTCCAATGACTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGHTHGP*SNDCCP
Trigger: GGGACAGCAGTCATTGGATCAGGGCCCATGCGTATG...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTGGTCGCTCCCGAGGATaGTGGGGGTCAGCCACCCAC +
Preference number: 4 (lower is better)
Translates to: IKKLSINLLPCFKDCLEAGRSRG*WGSATH
Trigger: GTGGGTGGCTGACCCCCAGCATCCTCGGGAGCGACC...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR GCA 90 bp TACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTATTGTCTTCATGACTaGCAGGCCCGGAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: YACFLVQSQHFQRLLCGDYCLHD*QARRPP
Trigger: CGGTGGCCTCCGGGCCTGGCAGTCATGAAGACAATA...ATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTCTAGGCCATCTAAAGTaGATCCAGCAGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: NHHGAAVTQAWWWRASVLLGHLK*IQQLTC
Trigger: GCAGGTGAGCTGCTGGATGCACTTTAGATGGCCTAG...AAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACGAGGAAGCAAATTTTTaGACAGGACGCTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHEEANF*TGRCGP
Trigger: CGGACCACAGCGTCCTGTGCAAAAATTTGCTTCCTC...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTCGGCCAGGGAGTCCATaGTCGCTCCCGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSRPGSP*SLPRML
Trigger: CAGCATCCTCGGGAGCGACCATGGACTCCCTGGCCG...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACAGGCTGGATTCTCCATaGAAGAGAAGGAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHRLDSP*KRRRMA
Trigger: GGCCATTCTCCTTCTCTTCCATGGAGAATCCAGCCT...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTCAGATCCGGCTCTGTaGCAGTCACACAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LVQSQHFQRLLCGDSVLDSDPAL*QSHSKL
Trigger: CAACTTGCTGTGTGACTGTCACAGAGCCGGATCTGA...GTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGACCAAGGATGTGAACTaGCATCCCGCCTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRTKDVN*HPAFPK
Trigger: TTTTGGAAAGGCGGGATGTCAGTTCACATCCTTGGT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACAAGGAAAGAACATGGTaGTTAATGCTGTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHKERTW*LMLSPW
Trigger: CCAGGGGGACAGCATTAATCACCATGTTCTTTCCTT...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTGGCATGGTGGTGGCGTaGATCGGTACTTACACACAC +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGGMVVA*IGTYTH
Trigger: GTGTGTGTAAGTACCGATGCACGCCACCACCATGCC...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTTCGGGACACCAGTCCTaGACAGTCATGTGCACACAG +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGSGHQS*TVMCTQ
Trigger: CTGTGTGCACATGACTGTGCAGGACTGGTGTCCCGA...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp CTGATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGCGGCCAGGGAGTCCATaGTCGCTCCCGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LIKKLSINLLPCFKDCLERPGSP*SLPRML
Trigger: CAGCATCCTCGGGAGCGACCATGGACTCCCTGGCCG...CTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CCA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGAGTGGATGTCGAGGGTaGCTCAGGACGCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRSGCRG*LRTLSL
Trigger: GAGGCTAAGCGTCCTGAGCCACCCTCGACATCCACT...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTCAAGGACACCATGAGTaGAAGCCAAGGAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGQGHHE*KPRREA
Trigger: GGCCTCTCTCCTTGGCTTCCACTCATGGTGTCCTTG...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGGGGCTATATCGGGGATaGCGTCCTAGGCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARGLYRG*RPRQGR
Trigger: CCTACCTTGCCTAGGACGCCATCCCCGATATAGCCC...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTGCATGCATCAGTTTCTaGGTGTCCATTTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NHHGAAVTQAWWWRASVLACISF*VSICAA
Trigger: GGCAGCACAAATGGACACCCAGAAACTGATGCATGC...AAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp AATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTACAGGAGCATCTATTGTCTTCATaGCTGCCAGGCCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: NYPLTCSPALKTVWRLQEHLLSS*LPGPEA
Trigger: GGCCTCCGGGCCTGGCAGTCATGAAGACAATAGATG...CTCCTGTAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR TCA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGTCTGCAGTATCTTGTaGCGGCAGCCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRVCSIL*RQPWQT
Trigger: AGTTTGCCAGGGCTGCCGTCACAAGATACTGCAGAC...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTGCAGCTGATTTAGGATaGAAAGCATCGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: NHHGAAVTQAWWWRASVLAADLG*KASHWA
Trigger: TGCCCAATGCGATGCTTTGCATCCTAAATCAGCTGC...AAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTTTTCAGCGGCTCTTGTaGGGCGATTCTGTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFFQRLL*GDSVLD
Trigger: GTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAA...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp GCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTTTCAGCGGCTCTTGTaGGGCGATTCTGTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ALSAALVRRFCLGLISVSFQRLL*GDSVLD
Trigger: GTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAA...AGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp GCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTCAGAACGTGTCTCTTTaGTCTTTGCAGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ARRILFSVRFQFLWGVQLQNVSL*SLQQGS
Trigger: CGAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTG...AAGCTGGACTCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTACACAGGCATGGTGGTaGCGTGCATCGGTACTTACA +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFTQAWW*RASVLT
Trigger: TGTAAGTACCGATGCACGCCACCACCATGCCTGTGT...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACACATCTATTGTCTTCATaGCTGCCAGGCCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTHLLSS*LPGPEA
Trigger: GGCCTCCGGGCCTGGCAGTCATGAAGACAATAGATG...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACTGTGAACAGAACTTCTaGGGCTTTCCTTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHCEQNF*GFPSSL
Trigger: AAGAGAAGAAGGAAAGCCTCAGAAGTTCTGTTCACA...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGCCCAGGTTAAGGCATAACGAAGTAGAGCTTATGTaGTGCTTCCCAGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: STIAFSVCRHCWPRLRHNEVELM*CFPGFL
Trigger: GAGGAAGCCTGGGAAGCATCACATAAGCTCTACTTC...GTTATGCCTTAACCTGGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR TCA 90 bp ATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGCCCAGGTGAAGAAAGGGTTTGTTaGGACGCAGGATCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: MNWPQPLHSPCVGTVGPGEERVC*DAGSLE
Trigger: TTCCAAGGATCCTGCGTCTCAACAAACCCTTTCTTC...ACCTGGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR GCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCATATTGTCTTCATGACTaGCAGGCCCGGAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSYCLHD*QARRPP
Trigger: CGGTGGCCTCCGGGCCTGGCAGTCATGAAGACAATA...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTGGGAGCAGCAACATATaGAAGCATGGACTTGTATCT +
Preference number: 4 (lower is better)
Translates to: NHHGAAVTQAWWWRASVLGSSNI*KHGLVS
Trigger: AGATACAAGTCCATGCTTGCATATGTTGCTGCTCCC...AAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGAAGAAGCAGGAGATTTaGCTGGTGACTCTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRKKQEI*LVTLKQ
Trigger: TTGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACACAGAGGGGTGGGAGTTaGGGGATGCTGGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTQRGGS*GMLALK
Trigger: TTTCAGAGCCAGCATCCCCCAACTCCCACCCCTCTG...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGGTTCTAGATGATCTTTaGCCACCTTTGTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRVLDDL*PPLYSQ
Trigger: CTGGGAATACAAAGGTGGCCAAAGATCATCTAGAAC...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGATGTGGCGGAAGGGATaGAAGGAAACAAAACCACTC +
Preference number: 4 (lower is better)
Translates to: TLTSGNNHHGAAVTQAWWMWRKG*KETKPL
Trigger: GAGTGGTTTTGTTTCCTTCCATCCCTTCCGCCACAT...CCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATAGCGGCTTCCTTTTGTaGACAGAACTTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: YACFLVQSQHFQRLLCGDSGFLL*TELLRL
Trigger: AAGCCTCAGAAGTTCTGTTCACAAAAGGAAGCCGCT...ATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGGCATCACTGCCATTCTaGGCTGATGTTGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARASLPF*ADVDGR
Trigger: TCTCCCATCAACATCAGCTCAGAATGGCAGTGATGC...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGACGAGAGTAGAGGATaGAAGGACGGCCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTDESRG*KDGLAY
Trigger: GTATGCCAGGCCGTCCTTTCATCCTCTACTCTCGTC...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACCTTGTATCTGTATTCTaGATATCTGAACCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHLVSVF*ISEPGD
Trigger: ATCCCCAGGTTCAGATATTCAGAATACAGATACAAG...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTAGATTCCGTGTCTGGTaGGGACTGCTCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSRFRVW*GLLSAS
Trigger: GGAAGCAGAGAGCAGTCCTCACCAGACACGGAATCT...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGAGAGTCTACCTCCTCTaGAAAGCTGGTACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARRVYLL*KAGTCV
Trigger: CACACAGGTACCAGCTTTGCAGAGGAGGTAGACTCT...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGCAACCATCATGGAGCTaGTGTAACACAGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARQPSWS*CNTGMV
Trigger: CACCATGCCTGTGTTACAGCAGCTCCATGATGGTTG...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGAGCACTTGGCAGGTTTaGATCTTGGGGCTATATCGG +
Preference number: 4 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRSTWQV*ILGLYR
Trigger: CCGATATAGCCCCAAGATGCAAACCTGCCAAGTGCT...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGACAAAATCCGTCCATTaGATGTTTGATAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRTKSVH*MFDSAM
Trigger: CATGGCACTATCAAACATGCAATGGACGGATTTTGT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTGAGTCAGAAGATGCATaGATCAGTTTCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGESEDA*ISFWVS
Trigger: GGACACCCAGAAACTGATGCATGCATCTTCTGACTC...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAGCTGTAACACAGGCATaGTGGTGGCGTGCATCGGTA +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSAVTQA*WWRASV
Trigger: TACCGATGCACGCCACCACCATGCCTGTGTTACAGC...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTGATGAAAGGACGGCCTaGCATACTAGGCCATCTAAA +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGDERTA*HTRPSK
Trigger: TTTAGATGGCCTAGTATGCCAGGCCGTCCTTTCATC...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGAATACACAGAAGGAATaGAGAAATGCCCCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRNTQKE*RNAPFK
Trigger: CTTAAAGGGGGCATTTCTCCATTCCTTCTGTGTATT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAGGCAGGTTTGCATCTTaGGGCTATATCGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSGRFAS*GYIGDG
Trigger: GCCATCCCCGATATAGCCCCAAGATGCAAACCTGCC...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 72 bp GCTAAACAATCCCTGTTAATGAATTGGCCTCAACCATaGCATTCTCCGTGTGTAGGCACTGTTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AKQSLLMNWPQP*HSPCVGTVGPG
Trigger: ACCTGGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTGTTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR TCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTGAAAGAATCCTTTTGTaGGGCTGGATTCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFERILL*GWILHG
Trigger: TCCATGGAGAATCCAGCCTCACAAAAGGATTCTTTC...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCAAATATTTGCTGAATaGACTCATGTGCCTACTTTC +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRQIFAE*THVPTF
Trigger: GAAAGTAGGCACATGAGTTCATTCAGCAAATATTTG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCATGGGCCCTGATCCAATaGCTGCTGTCCCTACAAGAA +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSWALIQ*LLSLQE
Trigger: TTCTTGTAGGGACAGCAGTCATTGGATCAGGGCCCA...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGAATTATCCATTAACCTaGTCCCCTGCTTTAAAGACT +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRNYPLT*SPALKT
Trigger: AGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACTATCTTCCTGTCCCATaGATACAGAAGATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHYLPVP*IQKIAF
Trigger: AAAAGCTATCTTCTGTATGCATGGGACAGGAAGATA...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTATGCTGGCTCTGAAATaGCAGAGAGGCATTAAGAAC +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGMLALK*QRGIKN
Trigger: GTTCTTAATGCCTCTCTGGCATTTCAGAGCCAGCAT...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCTATTTTGTTTGACATaGTCACTTACCTCACATCAG +
Preference number: 4 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRLFCLT*SLTSHQ
Trigger: CTGATGTGAGGTAAGTGAGCATGTCAAACAAAATAG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTACAGAGAAAAGACCATaGAAGGACACCATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFTEKRP*KDTMSG
Trigger: TCCACTCATGGTGTCCTTGCATGGTCTTTTCTCTGT...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTATCCAGCAGCTCACCTaGACCCCCACAAACCATAAG +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSIQQLT*TPTNHK
Trigger: CTTATGGTTTGTGGGGGTGCAGGTGAGCTGCTGGAT...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ATCAATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTCGGCCAGGGAGTCCATaGTCGCTCCCGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: INAFEKSAKAHINSYYACRPGSP*SLPRML
Trigger: CAGCATCCTCGGGAGCGACCATGGACTCCCTGGCCG...ACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACATTAATGTGACTTTCTaGAATGTTAACCCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHINVTF*NVNPAN
Trigger: GTTTGCGGGGTTAACATTCCAGAAAGTCACATTAAT...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp GCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTGCGGCGATTCTGTCTTaGACTTATTTCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ALSAALVRRFCLGLISVSAAILS*TYFCVL
Trigger: CAAGACACAGAAATAAGTCCAAGACAGAATCGCCGC...AGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGCCTCCTCTGCAAAGCTaGTACCTGTGTGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARPPLQS*YLCEMS
Trigger: TGACATTTCACACAGGTACCAGCTTTGCAGAGGAGG...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTGTAACACAGGCATGGTaGTGGCGTGCATCGGTACTT +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSVTQAW*WRASVL
Trigger: AAGTACCGATGCACGCCACCACCATGCCTGTGTTAC...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTGGGCAACAACCATCATaGAGCTGCTGTAACACAGGC +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSGQQPS*SCCNTG
Trigger: GCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCC...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCACTACTTTCCCAATCTTaGGTCTCACCGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSLLSQS*VSPLPH
Trigger: GTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAG...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp GAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGCCCAGGTTAAGGAATCTCAGAGCTTaGAATAAAAGCAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ELASTIAFSVCRHCWPRLRNLRA*NKSRLF
Trigger: GAACAGCCTGCTTTTATTCCAAGCTCTGAGATTCCT...TAACCTGGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR TCA 90 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTCAGGAGTATATACTTTaGCAGCAAGATTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: NHHGAAVTQAWWWRASVLQEYIL*QQDSLK
Trigger: CTTCAAAGAATCTTGCTGTCAAAGTATATACTCCTG...AAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTGAAGATCGTTTTTATGTaGTGCTTCCCAGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TFSGSCAAILSWTYFCVLKIVFM*CFPGFL
Trigger: GAGGAAGCCTGGGAAGCATCACATAAAAACGATCTT...CAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp ACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGAACCATTGTTCTAGATaGTCTTTGGCCACCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TLTSGNNHHGAAVTQAWWNHCSR*SLATFV
Trigger: TACAAAGGTGGCCAAAGATCATCTAGAACAATGGTT...CCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTGCTCATCTTCCCTTCTaGTCTACAAGCTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSAHLPF*STSSIR
Trigger: CCTGATGGAGCTTGTAGATCAGAAGGGAAGATGAGC...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTTGTTTGATAGTGCCATaGACCTCTCTTTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFCLIVP*TSLLLH
Trigger: GTGCAACAAAAGAGAGGTTCATGGCACTATCAAACA...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAGCTGTCCCCCTGGACTaGTTTTCAAGCTTTCTATGG +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSAVPLD*FSSFLW
Trigger: CCATAGAAAGCTTGAAAATCAGTCCAGGGGGACAGC...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGATTAACCTGCTCCCCTaGTTTAAAGACTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARINLLP*FKDCLE
Trigger: CTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAAT...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCATGTCTCTTTGGTCTTTaGAGCAGGGCTCGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSCLFGL*SRARLF
Trigger: AAAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACA...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGTCCTGCACAGTCATGTaGACACAGAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARSCTVM*TQRKDH
Trigger: ATGGTCTTTTCTCTGTGTGCACATGACTGTGCAGGA...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTCAGAACGTGTCTCTTTaGTCTTTGCAGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: IKKLSINLLPCFKDCLEAQNVSL*SLQQGS
Trigger: CGAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTG...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CCA 90 bp GTGGCTAAACAATCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTGTGTAGGCACTGTTaGCCCAGGTTAAGGCATAAC +
Preference number: 4 (lower is better)
Translates to: VAKQSLLMNWPQPLHSPCVCRHC*PRLRHN
Trigger: GTTATGCCTTAACCTGGGCCAACAGTGCCTACACAC...ACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTGTTTAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR TCA 90 bp AGTCCAGCTTTGATTGAGAAAAGTGGTTTGTTACTGAGGTCATATTATCTTCCTCATCTATTGTCTTCATaGCTGCCAGGCCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPALIEKSGLLLRSYYLPHLLSS*LPGPEA
Trigger: GGCCTCCGGGCCTGGCAGTCATGAAGACAATAGATG...AGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAAGCGGCTTCCTTTTGTaGACAGAACTTCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSSGFLL*TELLRL
Trigger: AAGCCTCAGAAGTTCTGTTCACAAAAGGAAGCCGCT...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGCCCAGGTAAAGTGGTTTGTTACTaGGGTCATATTATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MNWPQPLHSPCVGTVGPGKVVCY*GHIIFL
Trigger: CAGGAAGATAATATGACCTCAGTAACAAACCACTTT...ACCTGGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR TCA 90 bp GCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTGAGTCCAGCTTTGATTaGGAAAAGTGGTTTGTTACT +
Preference number: 4 (lower is better)
Translates to: ARRILFSVRFQFLWGVQLESSFD*EKWFVT
Trigger: AGTAACAAACCACTTTTCTCAATCAAAGCTGGACTC...AAGCTGGACTCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp GTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGCCCGAGTCCAGCTTTGATTaGGAAAAGTGGTTTGTTACT +
Preference number: 4 (lower is better)
Translates to: VNELASTIAFSVCRHCWPESSFD*EKWFVT
Trigger: AGTAACAAACCACTTTTCTCAATCAAAGCTGGACTC...GGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR TCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGAGGCAGGAGGCAACTaGCCAAGTAAGGATATTTTG +
Preference number: 4 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTEAGGN*PSKDIL
Trigger: CAAAATATCCTTACTTGGTCAGTTGCCTCCTGCCTC...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGCGGTATCTCAGAATGTaGCAGTATTTAGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARRYLRM*QYLEIG
Trigger: CCCTATCTCTAAATACTGTCACATTCTGAGATACCG...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGGTTGTCTATCCCTGTTaGCACATCAGTCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARVVYPC*HISLYH
Trigger: ATGGTAAAGACTGATGTGTCAACAGGGATAGACAAC...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTATGTCTCTTTGGTCTTTaGAGCAGGGCTCGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: SRNYPLTCSPALKTVWRLCLFGL*SRARLF
Trigger: AAAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACA...TAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR GCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGCTGAATGAACTCATGTaGCTACTTTCCCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARLNELM*LLSQSW
Trigger: CCAAGATTGGGAAAGTAGGCACATGAGTTCATTCAG...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTGAACCTCTCTTTTGTTaGACTCATCACAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGEPLFC*THHSCT
Trigger: TGTACAACTGTGATGAGTGCAACAAAAGAGAGGTTC...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGAAAGGAGTCAGAAGATaGATGCATCAGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARKGVRR*MHQFLG
Trigger: ACCCAGAAACTGATGCATGCATCTTCTGACTCCTTT...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp AGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTGAAGATCTTACCTGATTTAGGATaGAAAGCATCGCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGSCAAILSWTYFCVLKILPDLG*KASHWA
Trigger: TGCCCAATGCGATGCTTTGCATCCTAAATCAGGTAA...GATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTAGTCACACAGCAAGTTaGACACTGAGTTTTATAGGA +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFSHTAS*TLSFIG
Trigger: TCCTATAAAACTCAGTGTCCAACTTGCTGTGTGACT...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp GCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTGCTTTAAAGACTGTCTaGAGGCTACAGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: ARRILFSVRFQFLWGVQLALKTV*RLQEYI
Trigger: TATATACTCCTGTAGCCTCCAGACAGTCTTTAAAGC...AAGCTGGACTCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTACTCCCATTTCCACTTaGAACACAGCAAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLTPIST*NTARPR
Trigger: TCTTGGCCTTGCTGTGTTCCAAGTGGAAATGGGAGT...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGTTAATGCTGTCCCCCTaGACTGATTTTCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARLMLSP*TDFQAF
Trigger: GAAAGCTTGAAAATCAGTCCAGGGGGACAGCATTAA...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 72 bp CTGGGAACCATTGTTCTAGATGATCTTTGGCCACCTTaGTATTCCCAGTGTCAGCACAGTGACAGACATAGA +
Preference number: 4 (lower is better)
Translates to: LGTIVLDDLWPP*YSQCQHSDRHR
Trigger: TCTATGTCTGTCACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 72 bp CCTCTGGGGAGTCCAGCTTTGATTGAGAAAAGTGGTTaGTTACTGAGGTCATATTATCTTCCTGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: PLGSPALIEKSG*LLRSYYLPVPC
Trigger: GCATGGGACAGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CAA 72 bp TGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTaGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CFLVQSQHFQRL*CGDSVLDLFLC
Trigger: ACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTAAAGTGGTTTGTTACTaGGGTCATATTATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFKVVCY*GHIIFL
Trigger: CAGGAAGATAATATGACCTCAGTAACAAACCACTTT...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGAGTCCAGCTTTGATTaGGAAAAGTGGTTTGTTACT +
Preference number: 4 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRESSFD*EKWFVT
Trigger: AGTAACAAACCACTTTTCTCAATCAAAGCTGGACTC...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTAAGATCGTTTTTATGTaGTGCTTCCCAGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSKIVFM*CFPGFL
Trigger: GAGGAAGCCTGGGAAGCATCACATAAAAACGATCTT...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGGTTTCTAAGTTATTGTaGCTTTGTGACTGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARVSKLL*LCDCRS
Trigger: GCTACGACAGTCACAAAGTCACAATAACTTAGAAAC...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTCCAGTTCATCTAATATaGGGTTATTTTTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFPVHLI*GYFSDP
Trigger: CGGATCTGAAAAATAACCGCATATTAGATGAACTGG...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCCAGTTCATCTAATATaGGGTTATTTTTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: QHFQRLLCGDSVLDLFLCPVHLI*GYFSDP
Trigger: CGGATCTGAAAAATAACCGCATATTAGATGAACTGG...ACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp ACATTAATTCCTATTACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTGTCTCTTTGGTCTTTaGAGCAGGGCTCGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TLIPITLVSWFNLSTFSGCLFGL*SRARLF
Trigger: AAAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACA...GCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATAGGAATTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTCTGAACTGGAACTATTaGATGAATCTGATTCTGATG +
Preference number: 4 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGLNWNY*MNLILM
Trigger: CATCAGAATCAGATTCATGCAATAGTTCCAGTTCAG...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACACAAACCAAATCCCTGTaGCAAAGTGCCAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTQTKSL*QSAKES
Trigger: AGACTCTTTGGCACTTTGGCACAGGGATTTGGTTTG...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCACTGGGTGTCCATTTGTaGTGCCAGAAGAAAATACCA +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSLGVHL*CQKKIP
Trigger: TGGTATTTTCTTCTGGCAGCACAAATGGACACCCAG...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp AATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTACAGGAGAAGAAGCAGGAGATTTaGCTGGTGACTCTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: NYPLTCSPALKTVWRLQEKKQEI*LVTLKQ
Trigger: TTGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTT...CTCCTGTAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CCA 90 bp ATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCTAGTGGATGTCGAGGGTaGCTCAGGACGCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: MHLKSQQKPTLIPITLVSSGCRG*LRTLSL
Trigger: GAGGCTAAGCGTCCTGAGCCACCCTCGACATCCACT...AGAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTAATTATATACAGTTTTaGGCAGCGGCTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFNYIQF*AAASFC
Trigger: ACAAAAGGAAGCCGCTGCCCAAAACTGTATATAATT...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTGCGGCGATTCTGTCTTaGACTTATTTCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLAAILS*TYFCVL
Trigger: CAAGACACAGAAATAAGTCCAAGACAGAATCGCCGC...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp CCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGTCCCTGTTAATGAATTaGCCTCAACCATTGCATTCT +
Preference number: 4 (lower is better)
Translates to: PVNELASTIAFSVCRHCWSLLMN*PQPLHS
Trigger: AGAATGCAATGGTTGAGGCCAATTCATTAACAGGGA...CCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
3UTR CAA 72 bp ACAAACCATAAGCATCACTGCCATTCTGAGCTGATGTaGATGGGAGATGTTATAACTTTGAGGGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TNHKHHCHSELM*MGDVITLRGVR
Trigger: CCTCACTCCCCTCAAAGTTATAACATCTCCCATCAACATCAGCTCAGAATGGCAGTGATGCTTATGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 72 bp CTCTGTCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTaGATTGAGAAAAGTGGTTTGTTACTGAGGTCATAT +
Preference number: 4 (lower is better)
Translates to: LCQVPIPLGSPA*IEKSGLLLRSY
Trigger: ATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAGAGGAATTGGAACCTGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CAA 72 bp CAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTaGGACTTATTTCTGTGTCTTGAAGATCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: QHFQRLLCGDSV*DLFLCLEDRFY
Trigger: ATAAAAACGATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415439.5
3UTR CAA 72 bp GCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCTaGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AKAHINSYYACF*VQSQHFQRLLC
Trigger: GCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp ATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGATGTGAACAGAACTTCTaGGGCTTTCCTTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: INTARRILFSVRFQFLWGCEQNF*GFPSSL
Trigger: AAGAGAAGAAGGAAAGCCTCAGAAGTTCTGTTCACA...TCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGAAGCTGGTACCTGTGTaGAATGTCAGTATTTTTAGA +
Preference number: 4 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRKLVPV*NVSIFR
Trigger: TCTAAAAATACTGACATTTCACACAGGTACCAGCTT...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGACTAATATCCTACTCTaGGAAATGTGTAAGACACAG +
Preference number: 4 (lower is better)
Translates to: YTSKPGKHTPISTWNTARTNILL*EMCKTQ
Trigger: CTGTGTCTTACACATTTCTCAGAGTAGGATATTAGT...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAAGCTCCTATTTTGTTTaGCATGCTCACTTACCTCAC +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSSSYFV*HAHLPH
Trigger: GTGAGGTAAGTGAGCATGTCAAACAAAATAGGAGCT...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTTGTATTCTGAATATCTaGACCTGGGGATACCCAGAA +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLCILNI*TWGYPE
Trigger: TTCTGGGTATCCCCAGGTTCAGATATTCAGAATACA...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTAATTAACCTGCTCCCCTaGTTTAAAGACTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRNYPLTCSPALKTVWRLINLLP*FKDCLE
Trigger: CTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAAT...TAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR GCA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTTGTACAAATTCTTGGTaGCTTTTAATGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFCTNSW*LLMSCC
Trigger: ACAACAGCTCATTAAAAGGCACCAAGAATTTGTACA...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp TACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTGTACAAATTCTTGGTaGCTTTTAATGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: YACFLVQSQHFQRLLCGDCTNSW*LLMSCC
Trigger: ACAACAGCTCATTAAAAGGCACCAAGAATTTGTACA...ATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp CCTATTACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGTATCTTCCTGTCCCATaGATACAGAAGATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PITLVSWFNLSTFSGSCAYLPVP*IQKIAF
Trigger: AAAAGCTATCTTCTGTATGCATGGGACAGGAAGATA...CGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTAACCATAAGCATCACTaGCATTCTGAGCTGATGTTG +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLNHKHH*HSELML
Trigger: CAACATCAGCTCAGAATGGCAGTGATGCTTATGGTT...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp AGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTTGAAGATCAATTATATACAGTTTTaGGCAGCGGCTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SGSCAAILSWTYFCVLKINYIQF*AAASFC
Trigger: ACAAAAGGAAGCCGCTGCCCAAAACTGTATATAATT...GATCTTCAAGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCATGCAAAGCATCGCATTaGGCATTGTACATGTGTACA +
Preference number: 4 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSCKASH*ALYMCT
Trigger: TGTACACATGTACAATGCCCAATGCGATGCTTTGCA...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTGGAAGAGAAGGAGAATaGCCTAAGGACATTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSGREGE*PKDILK
Trigger: TTTCAGAATGTCCTTAGGCCATTCTCCTTCTCTTCC...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
3UTR CAA 72 bp ATGCTCACTTACCTCACATCAGTTCTGCCGATAGATTaGGTAAGTGGTGCTTTTAGTTTCCTTAATGCACCC +
Preference number: 4 (lower is better)
Translates to: MLTYLTSVLPID*VSGAFSFLNAP
Trigger: GGGTGCATTAAGGAAACTAAAAGCACCACTTACCAAATCTATCGGCAGAACTGATGTGAGGTAAGTGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACATATAGTCCTAATAGTTaGAGGAAGGAAGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTYSPNS*RKEGQE
Trigger: TTCCTGTCCTTCCTTCCTTCAACTATTAGGACTATA...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACATTAAGTTTCAACACATaGATTTTGGGGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTLSFNT*ILGKTG
Trigger: CCCTGTCTTCCCCAAAATTCATGTGTTGAAACTTAA...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp CAATCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTTATCTTCCTGTCCCATaGATACAGAAGATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QSLLMNWPQPLHSPCVGTYLPVP*IQKIAF
Trigger: AAAAGCTATCTTCTGTATGCATGGGACAGGAAGATA...AGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTGCTTTAAAGACTGTCTaGAGGCTACAGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLALKTV*RLQEYI
Trigger: TATATACTCCTGTAGCCTCCAGACAGTCTTTAAAGC...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGATGTGTACAAATTCTTaGTGCCTTTTAATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRMCTNS*CLLMSC
Trigger: ACAGCTCATTAAAAGGCACCAAGAATTTGTACACAT...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGATCTAATCAATGCATTTaGAAAGTCAGCAAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: INTARRILFSVRFQFLWGSNQCI*KVSKSP
Trigger: TGGGCTTTTGCTGACTTTTCAAATGCATTGATTAGA...TCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTTACTATCATCTCATTTaGAAGCTGATGTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLYYHLI*KLMCLG
Trigger: ACCCAAACACATCAGCTTTCAAATGAGATGATAGTA...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp TTGTTTGAAAATCAGCTGCATAGAAGTATAATTTCTCAGGTCAAAGTGCATGCTGAGAACTCACTTATGTaGTGCTTCCCAGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LFENQLHRSIISQVKVHAENSLM*CFPGFL
Trigger: GAGGAAGCCTGGGAAGCATCACATAAGTGAGTTCTC...AGCATGCACTTTGACCTGAGAAATTATACTTCTATGCAGCTGATTTTCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429790.1
CDS-3UTR GCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTCAGCAGATGATTCCGTaGAAAATTCAAGCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLQQMIP*KIQAFY
Trigger: GTAAAAAGCTTGAATTTTGCACGGAATCATCTGCTG...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR GCA 90 bp ATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGACTGAACTGGAACTATTaGATGAATCTGATTCTGATG +
Preference number: 4 (lower is better)
Translates to: INTARRILFSVRFQFLWGLNWNY*MNLILM
Trigger: CATCAGAATCAGATTCATGCAATAGTTCCAGTTCAG...TCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp GTGGCTAAACAATCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTCTGAACTGGAACTATTaGATGAATCTGATTCTGATG +
Preference number: 4 (lower is better)
Translates to: VAKQSLLMNWPQPLHSPCLNWNY*MNLILM
Trigger: CATCAGAATCAGATTCATGCAATAGTTCCAGTTCAG...ACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTGTTTAGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CCA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTGCTTTAAAGACTGTCTaGAGGCTACAGGAGTATATA +
Preference number: 4 (lower is better)
Translates to: IKKLSINLLPCFKDCLEAALKTV*RLQEYI
Trigger: TATATACTCCTGTAGCCTCCAGACAGTCTTTAAAGC...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CCA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTCAACATATGCAAGCATaGACTTGTATCTGTATTCTG +
Preference number: 4 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLQHMQA*TCICIL
Trigger: CAGAATACAGATACAAGTCCATGCTTGCATATGTTG...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR TCA 90 bp ATATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGCAGGAGTATATACTTTaGCAGCAAGATTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ISIQLEESSSLSGSNSSGQEYIL*QQDSLK
Trigger: CTTCAAAGAATCTTGCTGTCAAAGTATATACTCCTG...CCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp ATATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGTAAAAACCATTACCTaGTTTAGGATGCAAAGCATC +
Preference number: 4 (lower is better)
Translates to: ISIQLEESSSLSGSNSSGVKTIT*FRMQSI
Trigger: GATGCTTTGCATCCTAAATCAGGTAATGGTTTTTAC...CCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp TCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTACAGCAGATGATTCCGTaGAAAATTCAAGCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: SRNYPLTCSPALKTVWRLQQMIP*KIQAFY
Trigger: GTAAAAAGCTTGAATTTTGCACGGAATCATCTGCTG...TAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR GCA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTAATTATCCATTAACCTaGTCCCCTGCTTTAAAGACT +
Preference number: 4 (lower is better)
Translates to: IKKLSINLLPCFKDCLEANYPLT*SPALKT
Trigger: AGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATT...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR GCA 90 bp AATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCATTAACCTGCTCCCCTaGTTTAAAGACTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NAFEKSAKAHINSYYACFINLLP*FKDCLE
Trigger: CTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAAT...GAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp AGTCCAGCTTTGATTGAGAAAAGTGGTTTGTTACTGAGGTCATATTATCTTCCTAAGAAGCAGGAGATTTaGCTGGTGACTCTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SPALIEKSGLLLRSYYLPKKQEI*LVTLKQ
Trigger: TTGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTT...AGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp TGGTTTGTTACTGAGGTCATATTATCTTCCTGTCCCATGCATACAGAAGATAGCATTAATGTGACTTTCTaGAATGTTAACCCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: WFVTEVILSSCPMHTEDSINVTF*NVNPAN
Trigger: GTTTGCGGGGTTAACATTCCAGAAAGTCACATTAAT...GCTATCTTCTGTATGCATGGGACAGGAAGATAATATGACCTCAGTAACAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp CAAACTGCAGCAGATGATTCCGTGCAAAATTCAAGCTTTTTACCAGTTCATCTACCAGTTCATCTAATATaGGGTTATTTTTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: QTAADDSVQNSSFLPVHLPVHLI*GYFSDP
Trigger: CGGATCTGAAAAATAACCGCATATTAGATGAACTGG...TAGATGAACTGGTAAAAAGCTTGAATTTTGCACGGAATCATCTGCTGCAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CCA 90 bp ATGATGTCTGAACTGGAACTATTGCATGAATCTGATTCTGATGAAGAAAGAACTTGCAAAGCATCGCATTaGGCATTGTACATGTGTACA +
Preference number: 4 (lower is better)
Translates to: MMSELELLHESDSDEERTCKASH*ALYMCT
Trigger: TGTACACATGTACAATGCCCAATGCGATGCTTTGCA...AGTTCTTTCTTCATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGACATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp TTGTTTGAAAATCAGCTGCATAGAAGTATAATTTCTCAGGTCAAAGTGCATGCTGAGTCCAGCTTTGATTaGGAAAAGTGGTTTGTTACT +
Preference number: 4 (lower is better)
Translates to: LFENQLHRSIISQVKVHAESSFD*EKWFVT
Trigger: AGTAACAAACCACTTTTCTCAATCAAAGCTGGACTC...AGCATGCACTTTGACCTGAGAAATTATACTTCTATGCAGCTGATTTTCAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429790.1
CDS-3UTR GCA 90 bp AGTCCAGCTTTGATTGAGAAAAGTGGTTTGTTACTGAGGTCATATTATCTTCCTCAGCAGATGATTCCGTaGAAAATTCAAGCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: SPALIEKSGLLLRSYYLPQQMIP*KIQAFY
Trigger: GTAAAAAGCTTGAATTTTGCACGGAATCATCTGCTG...AGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CCA 90 bp ATGATGTCTGAACTGGAACTATTGCATGAATCTGATTCTGATGAAGAAAGAACTAGTCACACAGCAAGTTaGACACTGAGTTTTATAGGA +
Preference number: 4 (lower is better)
Translates to: MMSELELLHESDSDEERTSHTAS*TLSFIG
Trigger: TCCTATAAAACTCAGTGTCCAACTTGCTGTGTGACT...AGTTCTTTCTTCATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGACATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp ATGATGTCTGAACTGGAACTATTGCATGAATCTGATTCTGATGAAGAAAGAACTAAAGTGGTTTGTTACTaGGGTCATATTATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MMSELELLHESDSDEERTKVVCY*GHIIFL
Trigger: CAGGAAGATAATATGACCTCAGTAACAAACCACTTT...AGTTCTTTCTTCATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGACATCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR TCA 90 bp GAAAATCAGCTGCATAGAAGTATAATTTCTCAGGTCAAAGTGCATGCTTATTTCAAAGTGGTTTGTTACTaGGGTCATATTATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ENQLHRSIISQVKVHAYFKVVCY*GHIIFL
Trigger: CAGGAAGATAATATGACCTCAGTAACAAACCACTTT...GAAATAAGCATGCACTTTGACCTGAGAAATTATACTTCTATGCAGCTGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429790.1
CDS-3UTR GCA 90 bp AATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCAATTATCCATTAACCTaGTCCCCTGCTTTAAAGACT +
Preference number: 4 (lower is better)
Translates to: NAFEKSAKAHINSYYACFNYPLT*SPALKT
Trigger: AGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATT...GAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR GCA 90 bp GAAAATCAGCTGCATAGAAGTATAATTTCTCAGGTCAAAGTGCATGCTTATTTCCTGAACTGGAACTATTaGATGAATCTGATTCTGATG +
Preference number: 4 (lower is better)
Translates to: ENQLHRSIISQVKVHAYFLNWNY*MNLILM
Trigger: CATCAGAATCAGATTCATGCAATAGTTCCAGTTCAG...GAAATAAGCATGCACTTTGACCTGAGAAATTATACTTCTATGCAGCTGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429790.1
3UTR CAA 72 bp AATAAATGCTCTTTAGACCTTACTTTTCAGGTAGACTaGGGAGTTCCTTTACATTACAGGTTTCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: NKCSLDLTFQVD*GVPLHYRFLSL
Trigger: AAGACTGAGAAACCTGTAATGTAAAGGAACTCCCAAGTCTACCTGAAAAGTAAGGTCTAAAGAGCATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CCA 90 bp ATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCTATGTGTACAAATTCTTaGTGCCTTTTAATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: MHLKSQQKPTLIPITLVSMCTNS*CLLMSC
Trigger: ACAGCTCATTAAAAGGCACCAAGAATTTGTACACAT...AGAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCCTACTTTCCCAATCTaGGGTCTCACCGCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRPTFPI*GLTAPS
Trigger: TGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp AACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTGTGTCTCTTTGGTCTTaGCAGCAGGGCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: NHHGAAVTQAWWWRASVLVSLWS*QQGSPL
Trigger: AAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACAC...AAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCATGATGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp ACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGGCTGATGTGTTTGGGTaGGGTGATGGCAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: TLTSGNNHHGAAVTQAWWADVFG*GDGRGV
Trigger: CACCCCTCTGCCATCACCCAACCCAAACACATCAGC...CCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGAGAGGAAGCAAATTTTaGCACAGGACGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRRGSKF*HRTLWS
Trigger: GGACCACAGCGTCCTGTGCAAAAATTTGCTTCCTCT...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTCTCACTTTCAGCGGCTCTaGTGCGGCGATTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: ALSAALVRRFCLGLISVSHFQRL*CGDSVL
Trigger: CAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTG...AGACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS TCA 90 bp TTGTTTCAAAGTGGATGTCGAGGGTGGCTCAGGACGCTTAGCCTCTaGGGGATCTGGAGCGATCTCTTCTACAGAACGTGTCTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LFQSGCRGWLRTLSL*GIWSDLFYRTCLFG
Trigger: ACCAAAGAGACACGTTCTGTAGAAGAGATCGCTCCAGATCCCTCAGAGGCTAAGCGTCCTGAGCCACCCTCGACATCCACTTTGAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264926.7
ENST00000415439.5
CDS-3UTR CAA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACATGCAAAGCATCGCATaGGGCATTGTACATGTGTAC +
Preference number: 5 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHMQSIA*GIVHVY
Trigger: GTACACATGTACAATGCCCAATGCGATGCTTTGCAT...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGCTAGCCTTCTCTATGTaGTCTATCCCTGTTGACACA +
Preference number: 5 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRLAFSM*SIPVDT
Trigger: TGTGTCAACAGGGATAGACAACATAGAGAAGGCTAG...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGCCCAGGTTAAATTGGCCTCAACCATaGCATTCTCCGTGTGTAGGC +
Preference number: 5 (lower is better)
Translates to: ELASTIAFSVCRHCWPRLNWPQP*HSPCVG
Trigger: GCCTACACACGGAGAATGCAATGGTTGAGGCCAATT...TAACCTGGGCCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CAA 90 bp TGGAGCTGCTGTAACACAGGCATGGTGGTGGCGTGCATCGGTACTTACACACACGTTCTGCCGATAGATTaGGTAAGTGGTGCTTTTAGT +
Preference number: 5 (lower is better)
Translates to: WSCCNTGMVVACIGTYTHVLPID*VSGAFS
Trigger: ACTAAAAGCACCACTTACCAAATCTATCGGCAGAAC...GTGTGTGTAAGTACCGATGCACGCCACCACCATGCCTGTGTTACAGCAGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTCCTGGCCTCCACCCATaGATACTGGTAGTACCCCTC +
Preference number: 5 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSPGLHP*ILVVPL
Trigger: GAGGGGTACTACCAGTATCAATGGGTGGAGGCCAGG...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTCTGGGGAGTCCAGCTTaGATTGAGAAAAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGLGSPA*IEKSGL
Trigger: CAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAG...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTCACTTTCAGCGGCTCTaGTGCGGCGATTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSHFQRL*CGDSVL
Trigger: CAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTG...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp ACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGGAATACACATTTCTGTaGTGTAAGCTTCCCCGTCTG +
Preference number: 5 (lower is better)
Translates to: TLTSGNNHHGAAVTQAWWEYTFL*CKLPRL
Trigger: CAGACGGGGAAGCTTACACAACAGAAATGTGTATTC...CCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTTGGCAGGTTTGCATCTaGGGGCTATATCGGGGATGG +
Preference number: 5 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSWQVCI*GLYRGW
Trigger: CCATCCCCGATATAGCCCCAAGATGCAAACCTGCCA...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS GCA 90 bp GGGATCTGGAGCGATCTCTTCTACAGAACGTGTCTCTTTGGTCTTTaGAGCAGGGCTCGCCTCTTTTTGAGGGCTGAATTTGCTTTTATT +
Preference number: 5 (lower is better)
Translates to: GIWSDLFYRTCLFGL*SRARLFLRAEFAFI
Trigger: AATAAAAGCAAATTCAGCCCTCAAAAAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTGTAGAAGAGATCGCTCCAGATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264926.7
ENST00000415439.5
ENST00000495087.5
CDS-3UTR CAA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTCAGTCACACAGCAAGTaGGACACTGAGTTTTATAGG +
Preference number: 5 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFQSHSK*DTEFYR
Trigger: CCTATAAAACTCAGTGTCCAACTTGCTGTGTGACTG...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGAGTCCAGCTTTGATGAAGAAGCAGGAGATTaGGCTGGTGACTCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: EESSSLSGSNSSGESSFDEEAGD*AGDSKA
Trigger: TGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTTC...ATCAAAGCTGGACTCCCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp ACCATTGTTCTAGATGATCTTTGGCCACCTTTGTATTCCCAGTGTCAGCACAGTACAGAACGTGTCTCTTaGGTCTTTGCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: TIVLDDLWPPLYSQCQHSTERVS*VFAAGL
Trigger: GAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTGT...ACTGTGCTGACACTGGGAATACAAAGGTGGCCAAAGATCATCTAGAACAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TTGTTGCTGAGTCCTCCAGAGGGAACGAAGACTGTGTCCTCATGTGGCGGAAGGTCTGAACTGGAACTATaGCATGAATCTGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: LLLSPPEGTKTVSSCGGRSELEL*HESDSD
Trigger: ATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGA...CCTTCCGCCACATGAGGACACAGTCTTCGTTCCCTCTGGAGGACTCAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTGCGGCGATTCTGTCTaGGACTTATTTCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: YACFLVQSQHFQRLLCGDCGDSV*DLFLCL
Trigger: AAGACACAGAAATAAGTCCAAGACAGAATCGCCGCA...ATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp ACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGTGTTGTCTATCCCTGTaGACACATCAGTCTTTACCA +
Preference number: 5 (lower is better)
Translates to: TLTSGNNHHGAAVTQAWWCCLSL*THQSLP
Trigger: TGGTAAAGACTGATGTGTCAACAGGGATAGACAACA...CCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCACAAGATGGTGTGTTGTaGCTGAGTCCTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSQDGVL*LSPPEG
Trigger: TCCCTCTGGAGGACTCAGCAACAACACACCATCTTG...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp AATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTACAGGAGGAAGAAGCAGGAGATTaGGCTGGTGACTCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: NYPLTCSPALKTVWRLQEEEAGD*AGDSKA
Trigger: TGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTTC...CTCCTGTAGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CAA 90 bp ACATTAATTCCTATTACGCTTGTTTCTTGGTTCAATCTCAGCACTTTCAGCGGCGTGTCTCTTTGGTCTTaGCAGCAGGGCTCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: TLIPITLVSWFNLSTFSGVSLWS*QQGSPL
Trigger: AAGAGGCGAGCCCTGCTGCAAAGACCAAAGAGACAC...GCCGCTGAAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATAGGAATTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTACAGAACGTGTCTCTTaGGTCTTTGCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: IKKLSINLLPCFKDCLEATERVS*VFAAGL
Trigger: GAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTGT...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CAA 90 bp ACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGCATGGTGGCATGTGTACAAATTCTaGGTGCCTTTTAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: TLTSGNNHHGAAVTQAWWHVYKF*VPFNEL
Trigger: CAGCTCATTAAAAGGCACCAAGAATTTGTACACATG...CCACCATGCCTGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TACACTAGCAAACCAGGAAAGCACACTCCCATTTCCACTTGGAACACAGCAAGGTGCGGCGATTCTGTCTaGGACTTATTTCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: YTSKPGKHTPISTWNTARCGDSV*DLFLCL
Trigger: AAGACACAGAAATAAGTCCAAGACAGAATCGCCGCA...CCTTGCTGTGTTCCAAGTGGAAATGGGAGTGTGCTTTCCTGGTTTGCTAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTTTTCTGGGTGTCCATTaGTGCTGCCAGAAGAAAATA +
Preference number: 5 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGFLGVH*CCQKKI
Trigger: TATTTTCTTCTGGCAGCACAAATGGACACCCAGAAA...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTAGAAGAAAGGGTTTGTaGAGACGCAGGATCCTTGGA +
Preference number: 5 (lower is better)
Translates to: SLLMNWPQPLHSPCVGTVRRKGL*RRRILG
Trigger: TCCAAGGATCCTGCGTCTCAACAAACCCTTTCTTCT...AACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CAA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGAAGAAGCAGGAGATTaGGCTGGTGACTCTAAAGCA +
Preference number: 5 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTEEAGD*AGDSKA
Trigger: TGCTTTAGAGTCACCAGCCAAATCTCCTGCTTCTTC...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAAGGGCTCGCCTCTTTTaGAGGGCTGAATTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTRARLF*RAEFAF
Trigger: AAAAGCAAATTCAGCCCTCAAAAAGAGGCGAGCCCT...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GTGGCTAAACAATCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTCTGGGGAGTCCAGCTTaGATTGAGAAAAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: VAKQSLLMNWPQPLHSPCLGSPA*IEKSGL
Trigger: CAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAG...ACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTGTTTAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CAA 90 bp TTGGTTCAATCTCAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTCTGAACTGGAACTATaGCATGAATCTGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: LVQSQHFQRLLCGDSVLDSELEL*HESDSD
Trigger: ATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGA...GTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTGAGATTGAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACACAACGGAGACAGTCTTaGGAAGGGGAGGTCATAAAT +
Preference number: 5 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTQRRQS*EGEVIN
Trigger: ATTTATGACCTCCCCTTCCAAAGACTGTCTCCGTTG...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GAAACCCCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGCTACCACTAAATATGTaGGAAGTCTTAACTGCCGGT +
Preference number: 5 (lower is better)
Translates to: ETPRHTKKTRSTETVFGRLPLNM*EVLTAG
Trigger: ACCGGCAGTTAAGACTTCCAACATATTTAGTGGTAG...CCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TCATGTGCCTACTTTCCCAATCTTGGGTCTCACCGCTCCCTCACAAACTCCTTTCATTCTGAGCTGATGTaGATGGGAGATGTTATAACT +
Preference number: 5 (lower is better)
Translates to: SCAYFPNLGSHRSLTNSFHSELM*MGDVIT
Trigger: AGTTATAACATCTCCCATCAACATCAGCTCAGAATG...AAAGGAGTTTGTGAGGGAGCGGTGAGACCCAAGATTGGGAAAGTAGGCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GTGGCTAAACAATCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTTGCAGAAGAAAGGGTTaGTTGAGACGCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: VAKQSLLMNWPQPLHSPCCRRKG*LRRRIL
Trigger: AAGGATCCTGCGTCTCAACAAACCCTTTCTTCTGCA...ACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTGTTTAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CAA 90 bp ATCAAGAAATTATCCATTAACCTGCTCCCCTGCTTTAAAGACTGTCTGGAGGCTAGGGCTCGCCTCTTTTaGAGGGCTGAATTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: IKKLSINLLPCFKDCLEARARLF*RAEFAF
Trigger: AAAAGCAAATTCAGCCCTCAAAAAGAGGCGAGCCCT...AGCCTCCAGACAGTCTTTAAAGCAGGGGAGCAGGTTAATGGATAATTTCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418463.5
CDS-3UTR CAA 90 bp CAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTATCCACTTTAGTAACTaGTTTCAAAGTGGATGTCGA +
Preference number: 5 (lower is better)
Translates to: QHFQRLLCGDSVLDLFLCIHFSN*FQSGCR
Trigger: TCGACATCCACTTTGAAACAAGTTACTAAAGTGGAT...ACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTTATTACGCTTGTTTCTaGGTTCAATCTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGYYACF*VQSQHF
Trigger: AAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATA...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp CAGCACTTTCAGCGGCTCTTGTGCGGCGATTCTGTCTTGGACTTATTTCTGTGTTATTACGCTTGTTTCTaGGTTCAATCTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: QHFQRLLCGDSVLDLFLCYYACF*VQSQHF
Trigger: AAAGTGCTGAGATTGAACCAAGAAACAAGCGTAATA...ACACAGAAATAAGTCCAAGACAGAATCGCCGCACAAGAGCCGCTGAAAGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp CCAAGGCATACCAAAAAGACAAGGTCAACGGAGACAGTCTTTGGAAGGGGAGGTTTACTATCATCTCATTaGAAAGCTGATGTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: PRHTKKTRSTETVFGRGGLLSSH*KADVFG
Trigger: CCCAAACACATCAGCTTTCAAATGAGATGATAGTAA...ACCTCCCCTTCCAAAGACTGTCTCCGTTGACCTTGTCTTTTTGGTATGCCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp ACAAACAACTACATTAACCTCGGGCAACAACCATCATGGAGCTGCTGTAACACAGGGCAGGAACTGTCTTaGTTTTGCACATTACTTGAC +
Preference number: 5 (lower is better)
Translates to: TNNYINLGQQPSWSCCNTGQELS*FCTLLD
Trigger: GTCAAGTAATGTGCAAAACAAAGACAGTTCCTGCCC...TGTGTTACAGCAGCTCCATGATGGTTGTTGCCCGAGGTTAATGTAGTTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp CAATCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTAAGCAGGCTGTTCTTTaGCAGAAGAAAGGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: QSLLMNWPQPLHSPCVGTKQAVL*QKKGFV
Trigger: AACAAACCCTTTCTTCTGCAAAAGAACAGCCTGCTT...AGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CAA 90 bp ACAATCCCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACATCCCTGTTAATGAATaGGCCTCAACCATTGCATTC +
Preference number: 5 (lower is better)
Translates to: TIPVNELASTIAFSVCRHIPVNE*ASTIAF
Trigger: GAATGCAATGGTTGAGGCCAATTCATTAACAGGGAT...GTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGGGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CAA 90 bp TCTATAAGAGCTGTGCCCTCACGACTTAATCACATCCTAAAGTTCCCACCTCTTGCATCGCATTGGGCATaGTACATGTGTACAAATTCT +
Preference number: 5 (lower is better)
Translates to: SIRAVPSRLNHILKFPPLASHWA*YMCTNS
Trigger: AGAATTTGTACACATGTACAATGCCCAATGCGATGC...AAGAGGTGGGAACTTTAGGATGTGATTAAGTCGTGAGGGCACAGCTCTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp TGGTTTGTTACTGAGGTCATATTATCTTCCTGTCCCATGCATACAGAAGATAGCCTGGGGAGTCCAGCTTaGATTGAGAAAAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: WFVTEVILSSCPMHTEDSLGSPA*IEKSGL
Trigger: CAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAG...GCTATCTTCTGTATGCATGGGACAGGAAGATAATATGACCTCAGTAACAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp CCTGTTAATGAATTGGCCTCAACCATTGCATTCTCCGTGTGTAGGCACTGTTGGTCTGAACTGGAACTATaGCATGAATCTGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: PVNELASTIAFSVCRHCWSELEL*HESDSD
Trigger: ATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGA...CCAACAGTGCCTACACACGGAGAATGCAATGGTTGAGGCCAATTCATTAACAGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS-3UTR CAA 90 bp AATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCACAGAACGTGTCTCTTaGGTCTTTGCAGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: NAFEKSAKAHINSYYACFTERVS*VFAAGL
Trigger: GAGCCCTGCTGCAAAGACCAAAGAGACACGTTCTGT...GAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp ATATCAATACAGCTAGAAGAATCCTCTTCTCTGTCAGGTTCCAATTCCTCTGGGGCATCGCATTGGGCATaGTACATGTGTACAAATTCT +
Preference number: 5 (lower is better)
Translates to: ISIQLEESSSLSGSNSSGASHWA*YMCTNS
Trigger: AGAATTTGTACACATGTACAATGCCCAATGCGATGC...CCCAGAGGAATTGGAACCTGACAGAGAAGAGGATTCTTCTAGCTGTATTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS CCA 90 bp TCTCGAACTATTTCAGCAGCTGATTTAGGATGCAAAGCATCGCATTaGGCATTGTACATGTGTACAAATTCTTGGTGCCTTTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: SRTISAADLGCKASH*ALYMCTNSWCLLMS
Trigger: GCTCATTAAAAGGCACCAAGAATTTGTACACATGTACAATGCCCAATGCGATGCTTTGCATCCTAAATCAGCTGCTGAAATAGTTCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp GAATGGAGAAATGCCCCCTTTAAGGTCTCAATGCAGGTAGGGAGTATAAAGTCAATCCACTTTAGTAACTaGTTTCAAAGTGGATGTCGA +
Preference number: 5 (lower is better)
Translates to: EWRNAPFKVSMQVGSIKSIHFSN*FQSGCR
Trigger: TCGACATCCACTTTGAAACAAGTTACTAAAGTGGAT...TGACTTTATACTCCCTACCTGCATTGAGACCTTAAAGGGGGCATTTCTCCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS-3UTR CAA 90 bp AATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCAGGGCTCGCCTCTTTTaGAGGGCTGAATTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: NAFEKSAKAHINSYYACFRARLF*RAEFAF
Trigger: AAAAGCAAATTCAGCCCTCAAAAAGAGGCGAGCCCT...GAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp AGTCCAGCTTTGATTGAGAAAAGTGGTTTGTTACTGAGGTCATATTATCTTCCTATGCAAAGCATCGCATaGGGCATTGTACATGTGTAC +
Preference number: 5 (lower is better)
Translates to: SPALIEKSGLLLRSYYLPMQSIA*GIVHVY
Trigger: GTACACATGTACAATGCCCAATGCGATGCTTTGCAT...AGGAAGATAATATGACCTCAGTAACAAACCACTTTTCTCAATCAAAGCTGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp GAAAATCAGCTGCATAGAAGTATAATTTCTCAGGTCAAAGTGCATGCTTATTTCCTGGGGAGTCCAGCTTaGATTGAGAAAAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: ENQLHRSIISQVKVHAYFLGSPA*IEKSGL
Trigger: CAAACCACTTTTCTCAATCAAAGCTGGACTCCCCAG...GAAATAAGCATGCACTTTGACCTGAGAAATTATACTTCTATGCAGCTGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429790.1
CDS-3UTR CAA 90 bp AATGCATTTGAAAAGTCAGCAAAAGCCCACATTAATTCCTATTACGCTTGTTTCCAGTCACACAGCAAGTaGGACACTGAGTTTTATAGG +
Preference number: 5 (lower is better)
Translates to: NAFEKSAKAHINSYYACFQSHSK*DTEFYR
Trigger: CCTATAAAACTCAGTGTCCAACTTGCTGTGTGACTG...GAAACAAGCGTAATAGGAATTAATGTGGGCTTTTGCTGACTTTTCAAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp ATGATGTCTGAACTGGAACTATTGCATGAATCTGATTCTGATGAAGAAAGAACTCATGTGTACAAATTCTaGGTGCCTTTTAATGAGCTG +
Preference number: 5 (lower is better)
Translates to: MMSELELLHESDSDEERTHVYKF*VPFNEL
Trigger: CAGCTCATTAAAAGGCACCAAGAATTTGTACACATG...AGTTCTTTCTTCATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGACATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS-3UTR CAA 90 bp GAAAATCAGCTGCATAGAAGTATAATTTCTCAGGTCAAAGTGCATGCTTATTTCTCTGAACTGGAACTATaGCATGAATCTGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: ENQLHRSIISQVKVHAYFSELEL*HESDSD
Trigger: ATCAGAATCAGATTCATGCAATAGTTCCAGTTCAGA...GAAATAAGCATGCACTTTGACCTGAGAAATTATACTTCTATGCAGCTGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429790.1
CDS-3UTR CAA 90 bp TTGTTTGAAAATCAGCTGCATAGAAGTATAATTTCTCAGGTCAAAGTGCATGCTCTGAAAATCTTTACCTaGCATGAGGATTACTACTTC +
Preference number: 5 (lower is better)
Translates to: LFENQLHRSIISQVKVHALKIFT*HEDYYF
Trigger: GAAGTAGTAATCCTCATGCAAGGTAAAGATTTTCAG...AGCATGCACTTTGACCTGAGAAATTATACTTCTATGCAGCTGATTTTCAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429790.1
CDS CCA 72 bp GGCCCGGAGGCCACCGAGACTCGGCCAGGGAGTCCATaGTCGCTCCCGAGGATGCTGGGGGTCAGCCACCCA +
Preference number: 6 (lower is better)
Translates to: GPEATETRPGSP*SLPRMLGVSHP
Trigger: TGGGTGGCTGACCCCCAGCATCCTCGGGAGCGACCATGGACTCCCTGGCCGAGTCTCGGTGGCCTCCGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264926.7
ENST00000413832.1
ENST00000415439.5
ENST00000418463.5
ENST00000421052.5
ENST00000469793.1
ENST00000495087.5
CDS GCA 72 bp GTGGGCGGGGCGCCGCTTAAGGGCTTGTACTGCGCATaGGCCAGGCTTCTGCCGCACTTACCTCACCAGATC +
Preference number: 6 (lower is better)
Translates to: VGGAPLKGLYCA*ARLLPHLPHQI
Trigger: GATCTGGTGAGGTAAGTGCGGCAGAAGCCTGGCGCATGCGCAGTACAAGCCCTTAAGCGGCGCCCCGCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413832.1
CDS TCA 72 bp AGTGGATGTCGAGGGTGGCTCAGGACGCTTAGCCTCTaGGGGATCTGGAGCGATCTCTTCTACAGAACGTGT +
Preference number: 6 (lower is better)
Translates to: SGCRGWLRTLSL*GIWSDLFYRTC
Trigger: ACACGTTCTGTAGAAGAGATCGCTCCAGATCCCTCAGAGGCTAAGCGTCCTGAGCCACCCTCGACATCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264926.7
ENST00000415439.5
CDS CCA 72 bp TTGAGACGCAGGATCCTTGGAATATGTAACGTCTTTTaGAGAAGTAGAGCTTATGTGATGCTTCCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: LRRRILGICNVF*RSRAYVMLPRL
Trigger: AAGCCTGGGAAGCATCACATAAGCTCTACTTCTCCAAAAGACGTTACATATTCCAAGGATCCTGCGTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS TCA 72 bp AAAGCAGGCTGTTCTTTTGCAGAAGAAAGGGTTTGTTaGGACGCAGGATCCTTGGAATATGTAACGTCTTTT +
Preference number: 6 (lower is better)
Translates to: KAGCSFAEERVC*DAGSLEYVTSF
Trigger: AAAAGACGTTACATATTCCAAGGATCCTGCGTCTCAACAAACCCTTTCTTCTGCAAAAGAACAGCCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427329.5
CDS CCA 72 bp ATTTCAGCAGCTGATTTAGGATGCAAAGCATCGCATTaGGCATTGTACATGTGTACAAATTCTTGGTGCCTT +
Preference number: 6 (lower is better)
Translates to: ISAADLGCKASH*ALYMCTNSWCL
Trigger: AAGGCACCAAGAATTTGTACACATGTACAATGCCCAATGCGATGCTTTGCATCCTAAATCAGCTGCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS CAA 72 bp GCAGCTGATTTAGGATGCAAAGCATCGCATTGGGCATaGTACATGTGTACAAATTCTTGGTGCCTTTTAATG +
Preference number: 6 (lower is better)
Translates to: AADLGCKASHWA*YMCTNSWCLLM
Trigger: CATTAAAAGGCACCAAGAATTTGTACACATGTACAATGCCCAATGCGATGCTTTGCATCCTAAATCAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS CAA 90 bp ACTATTTCAGCAGCTGATTTAGGATGCAAAGCATCGCATTGGGCATaGTACATGTGTACAAATTCTTGGTGCCTTTTAATGAGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: TISAADLGCKASHWA*YMCTNSWCLLMSCC
Trigger: ACAACAGCTCATTAAAAGGCACCAAGAATTTGTACACATGTACAATGCCCAATGCGATGCTTTGCATCCTAAATCAGCTGCTGAAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264926.7
CDS CCA 72 bp AAACCATTACCTGATTTAGGATGCAAAGCATCGCATTaGGCATTGTACATGTGTACAAATTCTTGGTGCCTT +
Preference number: 6 (lower is better)
Translates to: KPLPDLGCKASH*ALYMCTNSWCL
Trigger: AAGGCACCAAGAATTTGTACACATGTACAATGCCCAATGCGATGCTTTGCATCCTAAATCAGGTAATGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415439.5
CDS CAA 72 bp TTACCTGATTTAGGATGCAAAGCATCGCATTGGGCATaGTACATGTGTACAAATTCTTGGTGCCTTTTAATG +
Preference number: 6 (lower is better)
Translates to: LPDLGCKASHWA*YMCTNSWCLLM
Trigger: CATTAAAAGGCACCAAGAATTTGTACACATGTACAATGCCCAATGCGATGCTTTGCATCCTAAATCAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415439.5