Pregenerated sensors for RACK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000204628Ensembl transcript IDs: ENST00000376817.8, ENST00000502548.5, ENST00000502844.5, ENST00000502890.5, ENST00000503081.1, ENST00000503170.1, ENST00000503494.5, ENST00000504128.5, ENST00000504325.5, ENST00000504726.1, ENST00000505461.5, ENST00000506312.3, ENST00000507261.1, ENST00000507756.5, ENST00000508044.1, ENST00000508682.5, ENST00000508963.1, ENST00000509148.1, ENST00000510199.5, ENST00000511473.5, ENST00000511566.5, ENST00000511900.5, ENST00000512805.6, ENST00000512968.5, ENST00000513027.3, ENST00000513060.5, ENST00000514183.5, ENST00000514318.1, ENST00000514455.5, ENST00000515417.5, ENST00000626067.1
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAGTGCAGGGGTGCGATCCTGGCTCACTACAGCCTTAAGCCCCTaGAGTTCAAGAGATCCTCCCACCTCAGCCTCCAGTAGGCATGTG | + |
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Preference number: 1 (lower is better) Translates to: WSAGVRSWLTTALSP*SSRDPPTSASSRHV Trigger: CACATGCCTACTGGAGGCTGAGGTGGGAGGATCTCTTGAACTGCAGGGGCTTAAGGCTGTAGTGAGCCAGGATCGCACCCCTGCACTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR CCA 90 bp | CTGCGTTCCACATCAGTCTTCCCTCTGATGCAGAAACACATTCACTaGCATGGCAAACGAGGGCATCCTCATCAACCTGGCTTGTCATTT | + |
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Preference number: 1 (lower is better) Translates to: LRSTSVFPLMQKHIH*HGKRGHPHQPGLSF Trigger: AAATGACAAGCCAGGTTGATGAGGATGCCCTCGTTTGCCATGCCAGTGAATGTGTTTCTGCATCAGAGGGAAGACTGATGTGGAACGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR CCA 90 bp | AGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTaGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAAGTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: SKQSLQGRNDSDRSG*HKFCSLTRFSPSGF Trigger: AAAGCCACTTGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR CCA 90 bp | TTCCACATCAGTCTTCCCTCTGATGCAGAAACACATTCACTGGCATaGCAAACGAGGGCATCCTCATCAACCTGGCTTGTCATTTCACTT | + |
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Preference number: 1 (lower is better) Translates to: FHISLPSDAETHSLA*QTRASSSTWLVISL Trigger: AAGTGAAATGACAAGCCAGGTTGATGAGGATGCCCTCGTTTGCCATGCCAGTGAATGTGTTTCTGCATCAGAGGGAAGACTGATGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR CCA 90 bp | GTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCTCCATTGTCTAGGCTaGAGTGCAGGGGTGCGATCC | + |
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Preference number: 2 (lower is better) Translates to: VASKQSLQGRNDSDRSGWLHCLG*SAGVRS Trigger: GGATCGCACCCCTGCACTCCAGCCTAGACAATGGAG...CCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR-3UTR GCA 90 bp | GACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAGCTGGAGTGCAGGGGTaGGATCCTGGCTCACTACAG | + |
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Preference number: 2 (lower is better) Translates to: DSDRSGWHKFCSLTRFSPAGVQG*DPGSLQ Trigger: CTGTAGTGAGCCAGGATCGCACCCCTGCACTCCAGC...TGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCGTGCCAATGGTCACCTaGCACACTCGCACCAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: QSLQGRNDSDRSGWHKFCVPMVT*HTRTRL Trigger: CAACCTGGTGCGAGTGTGGCAGGTGACCATTGGCAC...GCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCCTCCATTGTCTAGGCTaGAGTGCAGGGGTGCGATCC | + |
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Preference number: 2 (lower is better) Translates to: LQGRNDSDRSGWHKFCSLLHCLG*SAGVRS Trigger: GGATCGCACCCCTGCACTCCAGCCTAGACAATGGAG...GAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGTGCCAATGGTCACCTaGCACACTCGCACCAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: REEMTVTGQAGINSAVSLVPMVT*HTRTRL Trigger: CAACCTGGTGCGAGTGTGGCAGGTGACCATTGGCAC...TAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR-3UTR GCA 90 bp | GACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAAAGGCTGACAGCCACTaGGTTCCACATCAGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: DSDRSGWHKFCSLTRFSPKADSH*VPHQSS Trigger: GGAAGACTGATGTGGAACGCAGTGGCTGTCAGCCTT...TGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR GCA 90 bp | CGTGTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCGGCTGGCATAAATTCTaGAGTCTCACTAGATTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RVASKQSLQGRNDSDRSGGWHKF*SLTRFS Trigger: GCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCC...GCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCACACATTCACTGGCATaGCAAACGAGGGCATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QSLQGRNDSDRSGWHKFCTHSLA*QTRASS Trigger: TGAGGATGCCCTCGTTTGCCATGCCAGTGAATGTGT...GCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR CAA 90 bp | CACATTCACTGGCATGGCAAACGAGGGCATCCTCATCAACCTGGCTaGTCATTTCACTTTATGCCAAGGACACTGCTCTTGTGTCTGACA | + |
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Preference number: 2 (lower is better) Translates to: HIHWHGKRGHPHQPG*SFHFMPRTLLLCLT Trigger: TGTCAGACACAAGAGCAGTGTCCTTGGCATAAAGTGAAATGACAAGCCAGGTTGATGAGGATGCCCTCGTTTGCCATGCCAGTGAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCCAGAAACACATTCACTaGCATGGCAAACGAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QSLQGRNDSDRSGWHKFCQKHIH*HGKRGH Trigger: ATGCCCTCGTTTGCCATGCCAGTGAATGTGTTTCTG...GCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATACACTGCTCTTGTGTCTaGCAGACTAGATATACTAAC | + |
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Preference number: 2 (lower is better) Translates to: PANRVCREEMTVTGQAGIHCSCV*QTRYTN Trigger: GTTAGTATATCTAGTCTGTCAGACACAAGAGCAGTG...TATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR GCA 90 bp | GTGCCACAACGCCGGGTAGACTGTAAGAAACCGCTCTCATTTCAACAGCCAGCTTGTCATTTCACTTTATaGCAAGGACACTGCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: VPQRRVDCKKPLSFQQPACHFTL*QGHCSC Trigger: ACAAGAGCAGTGTCCTTGGCATAAAGTGAAATGACA...AGCTGGCTGTTGAAATGAGAGCGGTTTCTTACAGTCTACCCGGCGTTGTGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR GCA 90 bp | AATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCGGCTGGCATAAATTCTaGAGTCTCACTAGATTCAGC | + |
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Preference number: 2 (lower is better) Translates to: NDSDRSGWHKFCSLTRFSGWHKF*SLTRFS Trigger: GCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCC...GCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAAAGGCTCCAGACATTTaGAAACTGGTCAGATTAATT | + |
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Preference number: 2 (lower is better) Translates to: REEMTVTGQAGINSAVSLKAPDI*KLVRLI Trigger: AATTAATCTGACCAGTTTTCAAATGTCTGGAGCCTT...TAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR CCA 90 bp | GACTGTAAGAAACCGCTCTCATTTCAACAGCCAGCTTGTAAGTGGTGGTTATGTGCATCCTCATCAACCTaGCTTGTCATTTCACTTTAT | + |
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Preference number: 2 (lower is better) Translates to: DCKKPLSFQQPACKWWLCASSST*LVISLY Trigger: ATAAAGTGAAATGACAAGCCAGGTTGATGAGGATGC...ACATAACCACCACTTACAAGCTGGCTGTTGAAATGAGAGCGGTTTCTTACAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR GCA 72 bp | AGATCCGTCCACCTTGCTCCATTGTCTAGGCTGGAGTaGAGGGGTGCGATCCTGGCTCACTACAGCCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: RSVHLAPLSRLE*RGAILAHYSLK Trigger: CTTAAGGCTGTAGTGAGCCAGGATCGCACCCCTGCACTCCAGCCTAGACAATGGAGCAAGGTGGACGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR CAA 90 bp | CCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAGTCCACCTTGCTCCATaGTCTAGGCTGGAGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PANRVCREEMTVTGQAGIVHLAP*SRLECR Trigger: CCTGCACTCCAGCCTAGACAATGGAGCAAGGTGGAC...TATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR TCA 72 bp | GCTGACAGCCACTGCGTTCCACATCAGTCTTCCCTCTaGTGCAGAAACACATTCACTGGCATGGCAAACGAG | + |
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Preference number: 3 (lower is better) Translates to: ADSHCVPHQSSL*CRNTFTGMANE Trigger: CTCGTTTGCCATGCCAGTGAATGTGTTTCTGCATCAGAGGGAAGACTGATGTGGAACGCAGTGGCTGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR-3UTR CAA 90 bp | AGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGTCCACCTTGCTCCATaGTCTAGGCTGGAGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: REEMTVTGQAGINSAVSLVHLAP*SRLECR Trigger: CCTGCACTCCAGCCTAGACAATGGAGCAAGGTGGAC...TAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR CCA 72 bp | ACATCAGTCTTCCCTCTGATGCAGAAACACATTCACTaGCATGGCAAACGAGGGCATCCTCATCAACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: TSVFPLMQKHIH*HGKRGHPHQPG Trigger: GCCAGGTTGATGAGGATGCCCTCGTTTGCCATGCCAGTGAATGTGTTTCTGCATCAGAGGGAAGACTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR CCA 72 bp | AGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTaGCATAAATTCTGCAGTCTCACTAGATTCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SLQGRNDSDRSG*HKFCSLTRFSP Trigger: TGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| 3UTR TCA 72 bp | CATTTCACTTTATGCCAAGGACACTGCTCTTGTGTCTaGCAGACTAGATATACTAACAGAATGAGAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: HFTLCQGHCSCV*QTRYTNRMRGR Trigger: TCTCCCTCTCATTCTGTTAGTATATCTAGTCTGTCAGACACAAGAGCAGTGTCCTTGGCATAAAGTGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| 3UTR TCA 72 bp | GAGGAAGAAACAGCTGGTGATAAGGCTCCAGACATTTaGAAACTGGTCAGATTAATTAAGGTATTAATTGAA | + |
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Preference number: 3 (lower is better) Translates to: EEETAGDKAPDI*KLVRLIKVLIE Trigger: TTCAATTAATACCTTAATTAATCTGACCAGTTTTCAAATGTCTGGAGCCTTATCACCAGCTGTTTCTTCCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | CCTGCAGTTCAAGAGATCCTCCCACCTCAGCCTCCAGTAGGCATGTGCCACAACGCTGGAGTGCAGGGGTaGGATCCTGGCTCACTACAG | + |
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Preference number: 4 (lower is better) Translates to: PAVQEILPPQPPVGMCHNAGVQG*DPGSLQ Trigger: CTGTAGTGAGCCAGGATCGCACCCCTGCACTCCAGC...GTTGTGGCACATGCCTACTGGAGGCTGAGGTGGGAGGATCTCTTGAACTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | CCTGCAGTTCAAGAGATCCTCCCACCTCAGCCTCCAGTAGGCATGTGCCACAACGCAGGGGTGCGATCCTaGCTCACTACAGCCTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: PAVQEILPPQPPVGMCHNAGVRS*LTTALS Trigger: GCTTAAGGCTGTAGTGAGCCAGGATCGCACCCCTGC...GTTGTGGCACATGCCTACTGGAGGCTGAGGTGGGAGGATCTCTTGAACTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | CGTGTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCGTGCCAATGGTCACCTaGCACACTCGCACCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RVASKQSLQGRNDSDRSGVPMVT*HTRTRL Trigger: CAACCTGGTGCGAGTGTGGCAGGTGACCATTGGCAC...GCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | CCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATACTCCATTGTCTAGGCTaGAGTGCAGGGGTGCGATCC | + |
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Preference number: 4 (lower is better) Translates to: PANRVCREEMTVTGQAGILHCLG*SAGVRS Trigger: GGATCGCACCCCTGCACTCCAGCCTAGACAATGGAG...TATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | AATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCGCTGGAGTGCAGGGGTaGGATCCTGGCTCACTACAG | + |
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Preference number: 4 (lower is better) Translates to: NDSDRSGWHKFCSLTRFSAGVQG*DPGSLQ Trigger: CTGTAGTGAGCCAGGATCGCACCCCTGCACTCCAGC...GCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGCAGGGGTGCGATCCTaGCTCACTACAGCCTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: RVCREEMTVTGQAGINSAAGVRS*LTTALS Trigger: GCTTAAGGCTGTAGTGAGCCAGGATCGCACCCCTGC...TGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | TGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTCCATTGTCTAGGCTaGAGTGCAGGGGTGCGATCC | + |
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Preference number: 4 (lower is better) Translates to: CREEMTVTGQAGINSAVSLHCLG*SAGVRS Trigger: GGATCGCACCCCTGCACTCCAGCCTAGACAATGGAG...TGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | CTGGCATGGCAAACGAGGGCATCCTCATCAACCTGGCTTGTCATTTCACTTTATACAGACCCACTTACCTaGCCATCAGCAGACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LAWQTRASSSTWLVISLYTDPLT*PSADQA Trigger: GGCCTGGTCTGCTGATGGCCAGGTAAGTGGGTCTGT...ATAAAGTGAAATGACAAGCCAGGTTGATGAGGATGCCCTCGTTTGCCATGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | GTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGACACATTCACTGGCATaGCAAACGAGGGCATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VASKQSLQGRNDSDRSGWTHSLA*QTRASS Trigger: TGAGGATGCCCTCGTTTGCCATGCCAGTGAATGTGT...CCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | CCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATACCTGGACAGTGTATTTaGACACACCCAGGGTATTCC | + |
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Preference number: 4 (lower is better) Translates to: PANRVCREEMTVTGQAGIPGQCI*THPGYS Trigger: GGAATACCCTGGGTGTGTGCAAATACACTGTCCAGG...TATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS-3UTR CCA 90 bp | CAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGCACATCCTTGGTATaGCCCACAAATCGCCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: QSLQGRNDSDRSGWHKFCSTSLV*PTNRLV Trigger: CACGAGGCGATTTGTGGGCCATACCAAGGATGTGCT...GCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS-3UTR CCA 90 bp | GTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCAGCCAGCTTGTAAGTaGTGGTTATGTATTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VASKQSLQGRNDSDRSGWQPACK*WLCIPG Trigger: GCCAGGAATACATAACCACCACTTACAAGCTGGCTG...CCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS-3UTR TCA 90 bp | ACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAAGGAAGCAGAATCACCTaGGAGGACAGACCCACTTAC | + |
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Preference number: 4 (lower is better) Translates to: TVTGQAGINSAVSLDSAQGSRIT*EDRPTY Trigger: GTAAGTGGGTCTGTCCTCTCAGGTGATTCTGCTTCC...TTGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | TGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCATCCCATAACATGGCCTaGCCATCCTTGCCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CREEMTVTGQAGINSAVSSHNMA*PSLPPE Trigger: TTCTGGAGGCAAGGATGGCCAGGCCATGTTATGGGA...TGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS-3UTR CCA 90 bp | ACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAAGTGGTTATGTATTCCTaGCCATCAGCAGACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TVTGQAGINSAVSLDSAQVVMYS*PSADQA Trigger: GGCCTGGTCTGCTGATGGCCAGGAATACATAACCAC...TTGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS-3UTR CCA 90 bp | GCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATCCAGCTTGTAAGTGGTaGTTATGTATTCCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ASKQSLQGRNDSDRSGWHPACKW*LCIPGH Trigger: ATGGCCAGGAATACATAACCACCACTTACAAGCTGG...ATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS-3UTR TCA 90 bp | GTGCCACAACGCCGGGTAGACTGTAAGAAACCGCTCTCATTTCAACAGCCAGCTCACTGCTCTTGTGTCTaGCAGACTAGATATACTAAC | + |
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Preference number: 4 (lower is better) Translates to: VPQRRVDCKKPLSFQQPAHCSCV*QTRYTN Trigger: GTTAGTATATCTAGTCTGTCAGACACAAGAGCAGTG...AGCTGGCTGTTGAAATGAGAGCGGTTTCTTACAGTCTACCCGGCGTTGTGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | ATGTATTCCTTGAGGAAGAAACAGCTGGTGATAAGGCTCCAGACATTTGAAAACGTGCCAATGGTCACCTaGCACACTCGCACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MYSLRKKQLVIRLQTFENVPMVT*HTRTRL Trigger: CAACCTGGTGCGAGTGTGGCAGGTGACCATTGGCAC...GTTTTCAAATGTCTGGAGCCTTATCACCAGCTGTTTCTTCCTCAAGGAATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | GACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAGGCTGGCATAAATTCTaGAGTCTCACTAGATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSDRSGWHKFCSLTRFSPGWHKF*SLTRFS Trigger: GCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCC...TGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | GGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAAGTGGCTTTTAGTGACAGGTCAGGCTaGCATAAATTCTGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQAGINSAVSLDSAQVAFSDRSG*HKFCSL Trigger: GAGACTGCAGAATTTATGCCAGCCTGACCTGTCACT...AAAAGCCACTTGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | CATGGCAAACGAGGGCATCCTCATCAACCTGGCTTGTCATTTCACTTTATGCCAAGTGACAGGTCAGGCTaGCATAAATTCTGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGKRGHPHQPGLSFHFMPSDRSG*HKFCSL Trigger: GAGACTGCAGAATTTATGCCAGCCTGACCTGTCACT...TGGCATAAAGTGAAATGACAAGCCAGGTTGATGAGGATGCCCTCGTTTGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | AGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCACAGAAACACATTCACTaGCATGGCAAACGAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVCREEMTVTGQAGINSAQKHIH*HGKRGH Trigger: ATGCCCTCGTTTGCCATGCCAGTGAATGTGTTTCTG...TGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR TCA 90 bp | AGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCATCAGTCTTCCCTCTaGTGCAGAAACACATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLQGRNDSDRSGWHKFCSHQSSL*CRNTFT Trigger: AGTGAATGTGTTTCTGCATCAGAGGGAAGACTGATG...ACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | GGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAAGTGGCTTTTGGCTGGCATAAATTCTaGAGTCTCACTAGATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQAGINSAVSLDSAQVAFGWHKF*SLTRFS Trigger: GCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCC...AAAAGCCACTTGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | CTTTATGCCAAGGACACTGCTCTTGTGTCTGACAGACTAGATATACTAACAGAAAAGGCTGACAGCCACTaGGTTCCACATCAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYAKDTALVSDRLDILTEKADSH*VPHQSS Trigger: GGAAGACTGATGTGGAACGCAGTGGCTGTCAGCCTT...TTCTGTTAGTATATCTAGTCTGTCAGACACAAGAGCAGTGTCCTTGGCATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR GCA 90 bp | ACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCCCAATGTCATTTCACTTTATaGCAAGGACACTGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVTGQAGINSAVSLDSAQCHFTL*QGHCSC Trigger: ACAAGAGCAGTGTCCTTGGCATAAAGTGAAATGACA...TTGGGCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR CCA 90 bp | AACCGCTCTCATTTCAACAGCCAGCTTGTAAGTGGTGGTTATGTATTCCTTGAGGCATCCTCATCAACCTaGCTTGTCATTTCACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NRSHFNSQLVSGGYVFLEASSST*LVISLY Trigger: ATAAAGTGAAATGACAAGCCAGGTTGATGAGGATGC...CTCAAGGAATACATAACCACCACTTACAAGCTGGCTGTTGAAATGAGAGCGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR TCA 90 bp | ATGTATTCCTTGAGGAAGAAACAGCTGGTGATAAGGCTCCAGACATTTGAAAACAAGGCTCCAGACATTTaGAAACTGGTCAGATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: MYSLRKKQLVIRLQTFENKAPDI*KLVRLI Trigger: AATTAATCTGACCAGTTTTCAAATGTCTGGAGCCTT...GTTTTCAAATGTCTGGAGCCTTATCACCAGCTGTTTCTTCCTCAAGGAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS TCA 90 bp | GGAAGACCCCGAGGCTGGCCCACGCCCTGCTGGCAGGACCCTTCCTaGCTGGGTCCACCGTTCTTCTGGGTCTCACCACTTCTCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPRGWPTPCWQDPS*LGPPFFWVSPLLPA Trigger: GGCTGGGAGAAGTGGTGAGACCCAGAAGAACGGTGGACCCAGTCAGGAAGGGTCCTGCCAGCAGGGCGTGGGCCAGCCTCGGGGTCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510199.5 |
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| CDS GCA 90 bp | AAAAGTAGGCCGACACTTGAGCCACGAGGTCCTCTGGAGTCCACCTaGCTCCCCACGAGCCTTGGGCCGGGCGGCAGCTCAGAAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSRPTLEPRGPLEST*LPTSLGPGGSSETA Trigger: GGCTGTTTCTGAGCTGCCGCCCGGCCCAAGGCTCGTGGGGAGGCAGGTGGACTCCAGAGGACCTCGTGGCTCAAGTGTCGGCCTACTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502844.5 ENST00000514318.1 |
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| CDS CCA 90 bp | GGCGGCGAGAGCGTGTGTCGCTGCAGCGACGAGGATGGCACTGGATaGCTTAGAGAAACTAGCACCACAACCTCTCCTGCCGCCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGESVCRCSDEDGTG*LRETSTTTSPAAAL Trigger: CAAGGCGGCGGCAGGAGAGGTTGTGGTGCTAGTTTCTCTAAGCCATCCAGTGCCATCCTCGTCGCTGCAGCGACACACGCTCTCGCCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000376817.8 ENST00000502548.5 ENST00000503081.1 ENST00000503170.1 ENST00000505461.5 ENST00000506312.3 ENST00000507261.1 ENST00000508682.5 ENST00000508963.1 ENST00000511473.5 ENST00000512805.6 ENST00000512968.5 ENST00000513027.3 ENST00000513060.5 ENST00000514318.1 ENST00000626067.1 |
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| CDS GCA 90 bp | ATGATGATGGTCTTATTTGAGCCACGAGGTCCTCTGGAGTCCACCTaGCTCCCCACGAGCCTTGGGCCGGGCGGCAGCTCAGAAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MMMVLFEPRGPLEST*LPTSLGPGGSSETA Trigger: GGCTGTTTCTGAGCTGCCGCCCGGCCCAAGGCTCGTGGGGAGGCAGGTGGACTCCAGAGGACCTCGTGGCTCAAATAAGACCATCATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503170.1 |
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| CDS GCA 90 bp | AAGGGTCATCTGCTCAGTCATGGCGGCGGCGAGAGCGTGTGTCGCTaGAGCGACGAGGATGGCACTGGATGGCTTAGAGAAACTAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: KGHLLSHGGGESVCR*SDEDGTGWLRETST Trigger: GGTGCTAGTTTCTCTAAGCCATCCAGTGCCATCCTCGTCGCTGCAGCGACACACGCTCTCGCCGCCGCCATGACTGAGCAGATGACCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000376817.8 ENST00000502548.5 ENST00000503081.1 ENST00000503170.1 ENST00000503494.5 ENST00000504325.5 ENST00000504726.1 ENST00000505461.5 ENST00000506312.3 ENST00000507261.1 ENST00000508682.5 ENST00000508963.1 ENST00000511473.5 ENST00000511566.5 ENST00000511900.5 ENST00000512805.6 ENST00000512968.5 ENST00000513027.3 ENST00000513060.5 ENST00000514318.1 ENST00000515417.5 ENST00000626067.1 |
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| CDS TCA 90 bp | CCACCTCACTTCTGCCCAGATTCTTCCCAAGGCCCCAGAGCTAAGTaGGCAGCTACTTGCGTTGTGAGATCCCAGAGGCGCAGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPHFCPDSSQGPRAK*AATCVVRSQRRRVP Trigger: TGGAACCCTGCGCCTCTGGGATCTCACAACGCAAGTAGCTGCTCACTTAGCTCTGGGGCCTTGGGAAGAATCTGGGCAGAAGTGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS GCA 90 bp | TCCAGTTCCCAAATGGACTGGATCTCCCCTGGGAAACCAGCCAATTaGATCCACCTCACTTCTGCCCAGATTCTTCCCAAGGCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSQMDWISPGKPAN*IHLTSAQILPKAPE Trigger: CTCTGGGGCCTTGGGAAGAATCTGGGCAGAAGTGAGGTGGATGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTGGGAACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS-3UTR CAA 90 bp | CGTGTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCGAGACGATGATAGGGTaGCTGCTGTTGGGCGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVASKQSLQGRNDSDRSGETMIG*LLLGEK Trigger: CTTCTCGCCCAACAGCAGCAACCCTATCATCGTCTC...GCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS TCA 90 bp | TTAGAGACGCTGGCTAAGTGCTCCTTCCATGACGCTGTCTTCCACTaGGTAGGAGACGCCTTGTCCCCAAATACCTTGCCTCCAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LETLAKCSFHDAVFH*VGDALSPNTLPPEA Trigger: TGCTTCTGGAGGCAAGGTATTTGGGGACAAGGCGTCTCCTACTCAGTGGAAGACAGCGTCATGGAAGGAGCACTTAGCCAGCGTCTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514183.5 |
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| CDS-3UTR CAA 90 bp | CACTGGCATGGCAAACGAGGGCATCCTCATCAACCTGGCTTGTCATTTCACTTTGTCCACCTTGCTCCATaGTCTAGGCTGGAGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HWHGKRGHPHQPGLSFHFVHLAP*SRLECR Trigger: CCTGCACTCCAGCCTAGACAATGGAGCAAGGTGGAC...AAAGTGAAATGACAAGCCAGGTTGATGAGGATGCCCTCGTTTGCCATGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS GCA 90 bp | CTCAGACGAACTCAACAGCCACTTTGTGTCTTCTCTGCAACCAAATaGACAGCAGTTTGTGGCTGTAGAGTAGCTGGGGCCTCCTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRRTQQPLCVFSATK*TAVCGCRVAGASYA Trigger: GGCATAGGAGGCCCCAGCTACTCTACAGCCACAAACTGCTGTGCATTTGGTTGCAGAGAAGACACAAAGTGGCTGTTGAGTTCGTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502844.5 |
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| CDS CCA 90 bp | GGCCAAACATCTTCTGTAGGTGTGCTCTGCTTTCCAGTTCCCAAATaGACTGGATCTCCCCTGGGAAACCAGCCAATTGCATCCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQTSSVGVLCFPVPK*TGSPLGNQPIASTS Trigger: TGAGGTGGATGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTGGGAACTGGAAAGCAGAGCACACCTACAGAAGATGTTTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS-3UTR CAA 90 bp | AGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTGTCCACCTTGCTCCATaGTCTAGGCTGGAGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQGRNDSDRSGWHKFCSVHLAP*SRLECR Trigger: CCTGCACTCCAGCCTAGACAATGGAGCAAGGTGGAC...ACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000509148.1 |
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| CDS CCA 90 bp | AACATCTTCTGTAGGTGTGCTCTGCTTTCCAGTTCCCAAATGGACTaGATCTCCCCTGGGAAACCAGCCAATTGCATCCACCTCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NIFCRCALLSSSQMD*ISPGKPANCIHLTS Trigger: AGAAGTGAGGTGGATGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTGGGAACTGGAAAGCAGAGCACACCTACAGAAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS-3UTR CAA 90 bp | CGTGTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCCCTCATCAACCTGGCTaGTCATTTCACTTTATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RVASKQSLQGRNDSDRSGPHQPG*SFHFMP Trigger: TGGCATAAAGTGAAATGACAAGCCAGGTTGATGAGG...GCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS-3UTR CAA 90 bp | GTAGCCAGCAAACAGAGTCTGCAGGGAAGAAATGACAGTGACAGGTCAGGCTGGGTGGTTATGTATTCCTaGAGGAAGAAACAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VASKQSLQGRNDSDRSGWVVMYS*RKKQLV Trigger: CACCAGCTGTTTCTTCCTCAAGGAATACATAACCAC...CCAGCCTGACCTGTCACTGTCATTTCTTCCCTGCAGACTCTGTTTGCTGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS GCA 90 bp | CCTCCTATGCCTACCTCTGAGGGCCGACAGAAATGTAGTAATGAATaGTGGAAAAGCCACTTCAGGCGCTACAGGATTGGATGCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PPMPTSEGRQKCSNE*WKSHFRRYRIGCFY Trigger: GTAAAAGCATCCAATCCTGTAGCGCCTGAAGTGGCTTTTCCAGCATTCATTACTACATTTCTGTCGGCCCTCAGAGGTAGGCATAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502844.5 |
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| CDS GCA 90 bp | CATTCAACGGTCAGACTCATTTCCTGGGCTTTGTCTCTGTCTCATTaGATCACTCATACAACCCTGGATTTGGCTCTGATCACAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSTVRLISWALSLSH*ITHTTLDLALITES Trigger: TGACTCTGTGATCAGAGCCAAATCCAGGGTTGTATGAGTGATGCAATGAGACAGAGACAAAGCCCAGGAAATGAGTCTGACCGTTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502890.5 ENST00000513060.5 |
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| CDS CCA 90 bp | CTCAGACTTAGCAAACACTCTCATTCAACGGTCAGACTCATTTCCTaGGCTTTGTCTCTGTCTCATTGCATCACTCATACAACCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRLSKHSHSTVRLIS*ALSLSHCITHTTLD Trigger: ATCCAGGGTTGTATGAGTGATGCAATGAGACAGAGACAAAGCCCAGGAAATGAGTCTGACCGTTGAATGAGAGTGTTTGCTAAGTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502890.5 ENST00000513060.5 |
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| CDS TCA 90 bp | TGTCTCTGTCTCATTGCATCACTCATACAACCCTGGATTTGGCTCTaGTCACAGAGTCAAGTGACTGAGTATATGAAAGAGAAGAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLCLIASLIQPWIWL*SQSQVTEYMKEKSQ Trigger: TTGGCTCTTCTCTTTCATATACTCAGTCACTTGACTCTGTGATCAGAGCCAAATCCAGGGTTGTATGAGTGATGCAATGAGACAGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502890.5 ENST00000513060.5 |
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| CDS-3UTR CAA 90 bp | AATGACAGTGACAGGTCAGGCTGGCATAAATTCTGCAGTCTCACTAGATTCAGCAGGGTATTCCATAGCTaGATGGTTTTATCTCGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NDSDRSGWHKFCSLTRFSRVFHS*MVLSRD Trigger: ATCTCGAGATAAAACCATCAAGCTATGGAATACCCT...GCTGAATCTAGTGAGACTGCAGAATTTATGCCAGCCTGACCTGTCACTGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504128.5 |
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| CDS GCA 90 bp | TTGCCATTATCTCATTATCCTCCTAAAACCATCTTGGCTAATGTTTaGCATTTTACGTTAGAGACGCTGGCTAAGTGCTCCTTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSHYPPKTILANV*HFTLETLAKCSFHD Trigger: GTCATGGAAGGAGCACTTAGCCAGCGTCTCTAACGTAAAATGGCAAACATTAGCCAAGATGGTTTTAGGAGGATAATGAGATAATGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514183.5 |
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| CDS TCA 90 bp | CTGGCTTGTCATTTCACTTTATGCCAAGGACACTGCTCTTGTGTCTaGCAGACTAGATATACTAACAGAATGAGAGGGAGAAAATTAACT | + |
|
Preference number: 5 (lower is better) Translates to: LACHFTLCQGHCSCV*QTRYTNRMRGRKLT Trigger: AGTTAATTTTCTCCCTCTCATTCTGTTAGTATATCTAGTCTGTCAGACACAAGAGCAGTGTCCTTGGCATAAAGTGAAATGACAAGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509148.1 |
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| CDS CAA 72 bp | GAGGTCCTCTGGAGTCCACCTGCCTCCCCACGAGCCTaGGGCCGGGCGGCAGCTCAGAAACAGCCTCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: EVLWSPPASPRA*GRAAAQKQPLD Trigger: ATCCAGAGGCTGTTTCTGAGCTGCCGCCCGGCCCAAGGCTCGTGGGGAGGCAGGTGGACTCCAGAGGACCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502844.5 ENST00000503170.1 ENST00000514318.1 |
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| CDS CCA 72 bp | AGGTCCTCTGGAGTCCACCTGCCTCCCCACGAGCCTTaGGCCGGGCGGCAGCTCAGAAACAGCCTCTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: RSSGVHLPPHEP*AGRQLRNSLWI Trigger: AATCCAGAGGCTGTTTCTGAGCTGCCGCCCGGCCCAAGGCTCGTGGGGAGGCAGGTGGACTCCAGAGGACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502844.5 ENST00000503170.1 ENST00000514318.1 |
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| CDS CCA 72 bp | GCTGGCCCACGCCCTGCTGGCAGGACCCTTCCTGACTaGGTCCACCGTTCTTCTGGGTCTCACCACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGPRPAGRTLPD*VHRSSGSHHFS Trigger: GGAGAAGTGGTGAGACCCAGAAGAACGGTGGACCCAGTCAGGAAGGGTCCTGCCAGCAGGGCGTGGGCCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510199.5 |
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| CDS CCA 72 bp | GAAAAAGTAGGCCGACACTTGAGCCACGAGGTCCTCTaGAGTCCACCTGCCTCCCCACGAGCCTTGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: EKVGRHLSHEVL*SPPASPRALGR Trigger: CCGGCCCAAGGCTCGTGGGGAGGCAGGTGGACTCCAGAGGACCTCGTGGCTCAAGTGTCGGCCTACTTTTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000502844.5 ENST00000514318.1 |
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| CDS GCA 72 bp | CTGCTCAGTCATGGCGGCGGCGAGAGCGTGTGTCGCTaGAGCGACGAGGATGGCACTGGATGGCTTAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLSHGGGESVCR*SDEDGTGWLRE Trigger: TTCTCTAAGCCATCCAGTGCCATCCTCGTCGCTGCAGCGACACACGCTCTCGCCGCCGCCATGACTGAGCAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000376817.8 ENST00000502548.5 ENST00000503081.1 ENST00000503170.1 ENST00000503494.5 ENST00000504325.5 ENST00000504726.1 ENST00000505461.5 ENST00000506312.3 ENST00000507261.1 ENST00000508682.5 ENST00000508963.1 ENST00000511473.5 ENST00000511566.5 ENST00000511900.5 ENST00000512805.6 ENST00000512968.5 ENST00000513027.3 ENST00000513060.5 ENST00000514318.1 ENST00000515417.5 ENST00000626067.1 |
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| CDS CCA 72 bp | AGCGTGTGTCGCTGCAGCGACGAGGATGGCACTGGATaGCTTAGAGAAACTAGCACCACAACCTCTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVCRCSDEDGTG*LRETSTTTSPA Trigger: GGCAGGAGAGGTTGTGGTGCTAGTTTCTCTAAGCCATCCAGTGCCATCCTCGTCGCTGCAGCGACACACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000376817.8 ENST00000502548.5 ENST00000503081.1 ENST00000503170.1 ENST00000504325.5 ENST00000504726.1 ENST00000505461.5 ENST00000506312.3 ENST00000507261.1 ENST00000508682.5 ENST00000508963.1 ENST00000511473.5 ENST00000512805.6 ENST00000512968.5 ENST00000513027.3 ENST00000513060.5 ENST00000514318.1 ENST00000626067.1 |
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| CDS CCA 72 bp | TTCCACATGATGATGGTCTTATCTCCCCACGAGCCTTaGGCCGGGCGGCAGCTCAGAAACAGCCTCTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: FHMMMVLSPHEP*AGRQLRNSLWI Trigger: AATCCAGAGGCTGTTTCTGAGCTGCCGCCCGGCCCAAGGCTCGTGGGGAGATAAGACCATCATCATGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513027.3 |
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| CDS CCA 72 bp | CAAAGCTTTCCACAGGACTTGGAGTGTATGACCACCTaGGAGCACACCCTGACTGGTAAAGCCCCTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QSFPQDLECMTT*EHTLTGKAPAL Trigger: CAAGGCAGGGGCTTTACCAGTCAGGGTGTGCTCCCAGGTGGTCATACACTCCAAGTCCTGTGGAAAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502548.5 ENST00000508044.1 ENST00000515417.5 |
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| CDS CAA 90 bp | CTTGAACCCAGGAGGCGGAGGTTGTGGTCAGCCGAGATCACGCCATaGTACTTCAGCCTGGGGAACAAGCGAAACTGTCTCCGAGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LEPRRRRLWSAEITP*YFSLGNKRNCLREK Trigger: TTTTTCTCGGAGACAGTTTCGCTTGTTCCCCAGGCTGAAGTACAATGGCGTGATCTCGGCTGACCACAACCTCCGCCTCCTGGGTTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505461.5 |
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| CDS CAA 90 bp | TTCCAGTTCCCAAATGGACTGGATCTCCCCTGGGAAACCAGCCAATaGCATCCACCTCACTTCTGCCCAGATTCTTCCCAAGGCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FQFPNGLDLPWETSQ*HPPHFCPDSSQGPR Trigger: TCTGGGGCCTTGGGAAGAATCTGGGCAGAAGTGAGGTGGATGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTGGGAACTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS TCA 72 bp | CTGGCTAAGTGCTCCTTCCATGACGCTGTCTTCCACTaGGTAGGAGACGCCTTGTCCCCAAATACCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LAKCSFHDAVFH*VGDALSPNTLP Trigger: AGGCAAGGTATTTGGGGACAAGGCGTCTCCTACTCAGTGGAAGACAGCGTCATGGAAGGAGCACTTAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514183.5 |
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| CDS CAA 90 bp | TGGCCCACAAATCGCCTCGTGGTGGTGCCCCTGAGAGGGAGGAGTTaGTCATTCTCAGACTTAGCAAACACTCTCATTCAACGGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: WPTNRLVVVPLRGRS*SFSDLANTLIQRSD Trigger: GTCTGACCGTTGAATGAGAGTGTTTGCTAAGTCTGAGAATGACAAACTCCTCCCTCTCAGGGGCACCACCACGAGGCGATTTGTGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502890.5 ENST00000513060.5 |
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| CDS GCA 72 bp | CAAATGGACTGGATCTCCCCTGGGAAACCAGCCAATTaGATCCACCTCACTTCTGCCCAGATTCTTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: QMDWISPGKPAN*IHLTSAQILPK Trigger: CTTGGGAAGAATCTGGGCAGAAGTGAGGTGGATGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS GCA 72 bp | AGTGAGGGAGGCCAAACATCTTCTGTAGGTGTGCTCTaGTTTCCAGTTCCCAAATGGACTGGATCTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SEGGQTSSVGVL*FPVPKWTGSPL Trigger: CAGGGGAGATCCAGTCCATTTGGGAACTGGAAAGCAGAGCACACCTACAGAAGATGTTTGGCCTCCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS CCA 72 bp | TCTGCTTTCCAGTTCCCAAATGGACTGGATCTCCCCTaGGAAACCAGCCAATTGCATCCACCTCACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SAFQFPNGLDLP*ETSQLHPPHFC Trigger: GCAGAAGTGAGGTGGATGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTGGGAACTGGAAAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS CCA 72 bp | TGTAGGTGTGCTCTGCTTTCCAGTTCCCAAATGGACTaGATCTCCCCTGGGAAACCAGCCAATTGCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: CRCALLSSSQMD*ISPGKPANCIH Trigger: GTGGATGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTGGGAACTGGAAAGCAGAGCACACCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS GCA 72 bp | ACTCAACAGCCACTTTGTGTCTTCTCTGCAACCAAATaGACAGCAGTTTGTGGCTGTAGAGTAGCTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TQQPLCVFSATK*TAVCGCRVAGA Trigger: GGCCCCAGCTACTCTACAGCCACAAACTGCTGTGCATTTGGTTGCAGAGAAGACACAAAGTGGCTGTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502844.5 |
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| CDS CCA 72 bp | TCTTCTGTAGGTGTGCTCTGCTTTCCAGTTCCCAAATaGACTGGATCTCCCCTGGGAAACCAGCCAATTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSVGVLCFPVPK*TGSPLGNQPIA Trigger: TGCAATTGGCTGGTTTCCCAGGGGAGATCCAGTCCATTTGGGAACTGGAAAGCAGAGCACACCTACAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS GCA 72 bp | CCTACCTCTGAGGGCCGACAGAAATGTAGTAATGAATaGTGGAAAAGCCACTTCAGGCGCTACAGGATTGGA | + |
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Preference number: 6 (lower is better) Translates to: PTSEGRQKCSNE*WKSHFRRYRIG Trigger: TCCAATCCTGTAGCGCCTGAAGTGGCTTTTCCAGCATTCATTACTACATTTCTGTCGGCCCTCAGAGGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502844.5 |
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| CDS CCA 72 bp | ACCTCTGAGGGCCGACAGAAATGTAGTAATGAATGCTaGAAAAGCCACTTCAGGCGCTACAGGATTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: TSEGRQKCSNEC*KSHFRRYRIGC Trigger: GCATCCAATCCTGTAGCGCCTGAAGTGGCTTTTCCAGCATTCATTACTACATTTCTGTCGGCCCTCAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502844.5 |
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| CDS CCA 72 bp | AAACCGCTCTCATTTCAACAGCCAGCTTGTAAGTGGTaGTTATGTATTCCTGGCCATCAGCAGACCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KPLSFQQPACKW*LCIPGHQQTRP Trigger: TGGCCTGGTCTGCTGATGGCCAGGAATACATAACCACCACTTACAAGCTGGCTGTTGAAATGAGAGCGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000507756.5 |
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| CDS CAA 72 bp | AATCGCCTCGTGGTGGTGCCCCTGAGAGGGAGGAGTTaGTCATTCTCAGACTTAGCAAACACTCTCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: NRLVVVPLRGRS*SFSDLANTLIQ Trigger: TTGAATGAGAGTGTTTGCTAAGTCTGAGAATGACAAACTCCTCCCTCTCAGGGGCACCACCACGAGGCGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502890.5 ENST00000513060.5 |
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| CDS CCA 72 bp | AAGAAACCGCTCTCATTTCAACAGCCAGCTTGTAAGTaGTGGTTATGTATTCCTGGCCATCAGCAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: KKPLSFQQPACK*WLCIPGHQQTR Trigger: CCTGGTCTGCTGATGGCCAGGAATACATAACCACCACTTACAAGCTGGCTGTTGAAATGAGAGCGGTTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504128.5 ENST00000507756.5 |
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| CDS CAA 90 bp | TCATTCAACGGTCAGACTCATTTCCTGGGCTTTGTCTCTGTCTCATaGCATCACTCATACAACCCTGGATTTGGCTCTGATCACAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SFNGQTHFLGFVSVS*HHSYNPGFGSDHRV Trigger: GACTCTGTGATCAGAGCCAAATCCAGGGTTGTATGAGTGATGCAATGAGACAGAGACAAAGCCCAGGAAATGAGTCTGACCGTTGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502890.5 ENST00000513060.5 |
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| CDS TCA 72 bp | TGCAGTGTGCTGACTTACAAGGGACATCAGACCATGTaGCAAGAGAAAGAGTCAACTGAGGGCATCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CSVLTYKGHQTM*QEKESTEGICK Trigger: TTTGCAGATGCCCTCAGTTGACTCTTTCTCTTGTCACATGGTCTGATGTCCCTTGTAAGTCAGCACACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000502548.5 ENST00000508044.1 ENST00000515417.5 |
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| CDS CCA 72 bp | ATGTTCAAACTGCTGCCCACTCAGAACTTTTGCACCTaGCAAAAATGTTCAGCCACACTCCTCAGCAATGCT | + |
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Preference number: 6 (lower is better) Translates to: MFKLLPTQNFCT*QKCSATLLSNA Trigger: AGCATTGCTGAGGAGTGTGGCTGAACATTTTTGCCAGGTGCAAAAGTTCTGAGTGGGCAGCAGTTTGAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS CAA 72 bp | CCCTTTCCTGAAACTCAGACGAACTCAACAGCCACTTaGTGTCTTCTCTGCAACCAAATGCACAGCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PFPETQTNSTAT*CLLCNQMHSSL Trigger: CAAACTGCTGTGCATTTGGTTGCAGAGAAGACACAAAGTGGCTGTTGAGTTCGTCTGAGTTTCAGGAAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502844.5 |
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| CDS CAA 90 bp | CTTAGCAAACACTCTCATTCAACGGTCAGACTCATTTCCTGGGCTTaGTCTCTGTCTCATTGCATCACTCATACAACCCTGGATTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSKHSHSTVRLISWA*SLSHCITHTTLDLA Trigger: AGCCAAATCCAGGGTTGTATGAGTGATGCAATGAGACAGAGACAAAGCCCAGGAAATGAGTCTGACCGTTGAATGAGAGTGTTTGCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502890.5 ENST00000513060.5 |
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| CDS CAA 72 bp | ATGAATGCTGGAAAAGCCACTTCAGGCGCTACAGGATaGGATGCTTTTACTGAAACCTGTCCCACTCAACAA | + |
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Preference number: 6 (lower is better) Translates to: MNAGKATSGATG*DAFTETCPTQQ Trigger: TTGTTGAGTGGGACAGGTTTCAGTAAAAGCATCCAATCCTGTAGCGCCTGAAGTGGCTTTTCCAGCATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502844.5 |
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| CDS CAA 72 bp | GTAAAACATGTTCAAACTGCTGCCCACTCAGAACTTTaGCACCTGGCAAAAATGTTCAGCCACACTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VKHVQTAAHSEL*HLAKMFSHTPQ Trigger: CTGAGGAGTGTGGCTGAACATTTTTGCCAGGTGCAAAAGTTCTGAGTGGGCAGCAGTTTGAACATGTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513060.5 |
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| CDS TCA 72 bp | AGCCACTTCAGGCGCTACAGGATTGGATGCTTTTACTaGAACCTGTCCCACTCAACAAATTTTACGATTAAC | + |
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Preference number: 6 (lower is better) Translates to: SHFRRYRIGCFY*NLSHSTNFTIN Trigger: GTTAATCGTAAAATTTGTTGAGTGGGACAGGTTTCAGTAAAAGCATCCAATCCTGTAGCGCCTGAAGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502844.5 ENST00000514318.1 |
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| CDS GCA 72 bp | TCTCATTATCCTCCTAAAACCATCTTGGCTAATGTTTaGCATTTTACGTTAGAGACGCTGGCTAAGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SHYPPKTILANV*HFTLETLAKCS Trigger: GGAGCACTTAGCCAGCGTCTCTAACGTAAAATGGCAAACATTAGCCAAGATGGTTTTAGGAGGATAATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514183.5 |
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| CDS TCA 72 bp | CCCCTCCCAACTTACATAAATCACTCCAATCATTTCTaGAAACCAGGATCCCAATCTCATCAACTGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PLPTYINHSNHF*KPGSQSHQLLQ Trigger: TTGAAGCAGTTGATGAGATTGGGATCCTGGTTTTCAGAAATGATTGGAGTGATTTATGTAAGTTGGGAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514183.5 ENST00000514455.5 |
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| CDS CAA 90 bp | CATATTCTCAGATTGCCATTATCTCATTATCCTCCTAAAACCATCTaGGCTAATGTTTGCCATTTTACGTTAGAGACGCTGGCTAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: HILRLPLSHYPPKTI*ANVCHFTLETLAKC Trigger: GCACTTAGCCAGCGTCTCTAACGTAAAATGGCAAACATTAGCCAAGATGGTTTTAGGAGGATAATGAGATAATGGCAATCTGAGAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514183.5 |
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| CDS TCA 72 bp | CAATTCTTACCTTTCCTCCATTACCCCAGGCTTCTTTaGAAGCTAATGACTCAAGTACCAATATTTATCTCT | + |
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Preference number: 6 (lower is better) Translates to: QFLPFLHYPRLL*KLMTQVPIFIS Trigger: AGAGATAAATATTGGTACTTGAGTCATTAGCTTTCAAAGAAGCCTGGGGTAATGGAGGAAAGGTAAGAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514183.5 ENST00000514455.5 |
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| CDS TCA 72 bp | TCCCACTCAACAAATTTTACGATTAACAGCCAGACATaGTTCAAAAGTCAGACAATTCTTAACAGTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SHSTNFTINSQT*FKSQTILNSVA Trigger: TGCTACACTGTTAAGAATTGTCTGACTTTTGAATCATGTCTGGCTGTTAATCGTAAAATTTGTTGAGTGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502844.5 ENST00000514318.1 |
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