Pregenerated sensors for RACGAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000161800Ensembl transcript IDs: ENST00000427314.6, ENST00000546595.5, ENST00000546723.5, ENST00000546764.5, ENST00000546786.5, ENST00000547905.5, ENST00000548247.1, ENST00000548644.5, ENST00000548961.5, ENST00000549777.5, ENST00000550149.5, ENST00000550651.5, ENST00000551876.5, ENST00000552004.2, ENST00000552921.5
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTCAGCTGTGGCTTGACTTGCTCATCTCCCCAGGGGCGGCCGCCTaGTCCGATGTCCCGACAGGCGAACTGTCATCGACGATCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GQLWLDLLISPGAAA*SDVPTGELSSTIPG Trigger: TCCAGGGATCGTCGATGACAGTTCGCCTGTCGGGACATCGGATCAGGCGGCCGCCCCTGGGGAGATGAGCAAGTCAAGCCACAGCTGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS TCA 90 bp | TCTTCCAGTCACTGTTACACGGCCTTTCACAGGTCAGCTGTGGCTTaGCTTGCTCATCTCCCCAGGGGCGGCCGCCTGATCCGATGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SSSHCYTAFHRSAVA*LAHLPRGGRLIRCP Trigger: GGGACATCGGATCAGGCGGCCGCCCCTGGGGAGATGAGCAAGTCAAGCCACAGCTGACCTGTGAAAGGCCGTGTAACAGTGACTGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS TCA 90 bp | CCATCTTTCCAACGGCAGAGCAGCGCCGCGCCCACAGCTCCGGTTTaGAAACCTTCACCAACCAATCACAGAGAAATTTATTCCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PSFQRQSSAAPTAPV*KPSPTNHREIYSSR Trigger: GCGGGAGGAATAAATTTCTCTGTGATTGGTTGGTGAAGGTTTTCAAACCGGAGCTGTGGGCGCGGCGCTGCTCTGCCGTTGGAAAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552921.5 |
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| CDS TCA 90 bp | CATCATAGTATCCATCTTTCCTCTAGACAGTTTAAACTTAAACGCTaGTGCCTGGGTCCGTGCCTTTGGCATAAACTCCCGCAGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: HHSIHLSSRQFKLKR*CLGPCLWHKLPQHC Trigger: ACAGTGCTGCGGGAGTTTATGCCAAAGGCACGGACCCAGGCATCAGCGTTTAAGTTTAAACTGTCTAGAGGAAAGATGGATACTATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS TCA 72 bp | TGGCTTGACTTGCTCATCTCCCCAGGGGCGGCCGCCTaGTCCGATGTCCCGACAGGCGAACTGTCATCGACG | + |
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Preference number: 6 (lower is better) Translates to: WLDLLISPGAAA*SDVPTGELSST Trigger: CGTCGATGACAGTTCGCCTGTCGGGACATCGGATCAGGCGGCCGCCCCTGGGGAGATGAGCAAGTCAAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS GCA 72 bp | AGGTCCCTGGCTGCCAACCGTCTGGCCACAGCCCGATaGGTGTCTTCATTCTCTCGCCTTCGCTGGGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: RSLAANRLATAR*VSSFSRLRWVP Trigger: CGGAACCCAGCGAAGGCGAGAGAATGAAGACACGCATCGGGCTGTGGCCAGACGGTTGGCAGCCAGGGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS CCA 72 bp | AGGGAGGCTTGGCTAGGTCCCTGGCTGCCAACCGTCTaGCCACAGCCCGATGCGTGTCTTCATTCTCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: REAWLGPWLPTV*PQPDACLHSLA Trigger: GGCGAGAGAATGAAGACACGCATCGGGCTGTGGCCAGACGGTTGGCAGCCAGGGACCTAGCCAAGCCTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS TCA 72 bp | CACTGTTACACGGCCTTTCACAGGTCAGCTGTGGCTTaGCTTGCTCATCTCCCCAGGGGCGGCCGCCTGATC | + |
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Preference number: 6 (lower is better) Translates to: HCYTAFHRSAVA*LAHLPRGGRLI Trigger: GATCAGGCGGCCGCCCCTGGGGAGATGAGCAAGTCAAGCCACAGCTGACCTGTGAAAGGCCGTGTAACAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS CCA 72 bp | CTTCCTATCACAATCCAGCGGCAGACGCACCTGGTCTaGCACCCCCACTACTCACTTCAGTCAGCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LPITIQRQTHLV*HPHYSLQSAWP Trigger: GGGCCAGGCTGACTGAAGTGAGTAGTGGGGGTGCCAGACCAGGTGCGTCTGCCGCTGGATTGTGATAGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000546595.5 ENST00000546723.5 ENST00000546786.5 |
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| CDS CAA 72 bp | TCACTGTTACACGGCCTTTCACAGGTCAGCTGTGGCTaGACTTGCTCATCTCCCCAGGGGCGGCCGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLLHGLSQVSCG*TCSSPQGRPPD Trigger: ATCAGGCGGCCGCCCCTGGGGAGATGAGCAAGTCAAGCCACAGCTGACCTGTGAAAGGCCGTGTAACAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS CAA 90 bp | TTCTTCCAGTCACTGTTACACGGCCTTTCACAGGTCAGCTGTGGCTaGACTTGCTCATCTCCCCAGGGGCGGCCGCCTGATCCGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: FFQSLLHGLSQVSCG*TCSSPQGRPPDPMS Trigger: GGACATCGGATCAGGCGGCCGCCCCTGGGGAGATGAGCAAGTCAAGCCACAGCTGACCTGTGAAAGGCCGTGTAACAGTGACTGGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS CCA 72 bp | CTCTGCTTCCTATCACAATCCAGCGGCAGACGCACCTaGTCTGGCACCCCCACTACTCACTTCAGTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LCFLSQSSGRRT*SGTPTTHFSQP Trigger: AGGCTGACTGAAGTGAGTAGTGGGGGTGCCAGACCAGGTGCGTCTGCCGCTGGATTGTGATAGGAAGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000546595.5 ENST00000546723.5 ENST00000546786.5 |
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| CDS CAA 90 bp | TCCATCTTTCCAACGGCAGAGCAGCGCCGCGCCCACAGCTCCGGTTaGAAAACCTTCACCAACCAATCACAGAGAAATTTATTCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SIFPTAEQRRAHSSG*KTFTNQSQRNLFLP Trigger: CGGGAGGAATAAATTTCTCTGTGATTGGTTGGTGAAGGTTTTCAAACCGGAGCTGTGGGCGCGGCGCTGCTCTGCCGTTGGAAAGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552921.5 |
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| CDS TCA 72 bp | CAACGGCAGAGCAGCGCCGCGCCCACAGCTCCGGTTTaGAAACCTTCACCAACCAATCACAGAGAAATTTAT | + |
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Preference number: 6 (lower is better) Translates to: QRQSSAAPTAPV*KPSPTNHREIY Trigger: ATAAATTTCTCTGTGATTGGTTGGTGAAGGTTTTCAAACCGGAGCTGTGGGCGCGGCGCTGCTCTGCCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552921.5 |
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| CDS GCA 72 bp | GTCCTTCGCCAACTGGATAAATTCACACGAACACTCTaGTTCCTATCACAATCCAGCGGCAGACGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLRQLDKFTRTL*FLSQSSGRRTW Trigger: CCAGGTGCGTCTGCCGCTGGATTGTGATAGGAAGCAGAGTGTTCGTGTGAATTTATCCAGTTGGCGAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546595.5 |
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| CDS GCA 72 bp | ACATTCAGCATCATAGTATCCATCACACGAACACTCTaGTTCCTATCACAATCCAGCGGCAGACGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: TFSIIVSITRTL*FLSQSSGRRTW Trigger: CCAGGTGCGTCTGCCGCTGGATTGTGATAGGAAGCAGAGTGTTCGTGTGATGGATACTATGATGCTGAATGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546723.5 |
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| CDS CCA 72 bp | TTTCCTCTAGACAGTTTAAACTTAAACGCTGATGCCTaGGTCCGTGCCTTTGGCATAAACTCCCGCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: FPLDSLNLNADA*VRAFGINSRST Trigger: AGTGCTGCGGGAGTTTATGCCAAAGGCACGGACCCAGGCATCAGCGTTTAAGTTTAAACTGTCTAGAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548247.1 |
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| CDS CCA 72 bp | GGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATaGACACACAATCCTCCTCCAGGGACTGCTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: GPFWISASPAVK*THNPPPGTALI Trigger: TATTAAAGCAGTCCCTGGAGGAGGATTGTGTGTCCATTTTACAGCTGGAGAAGCCGAGATCCAGAAAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548961.5 |
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| CDS CCA 72 bp | GTTAAAAGCTGCTGTAGATTTATTCTGCCCACAACTTaGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VKSCCRFILPTT*GSFLDLGFSSC Trigger: ACAGCTGGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCAGAATAAATCTACAGCAGCTTTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548961.5 |
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| CDS TCA 72 bp | CCAGATGTGTCACACATGAGCATCTCTCGAATCAGCTaGATCTGTCGTTCGGACTTCATTTCCTTCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: PDVSHMSISRIS*ICRSDFISFTE Trigger: CTCAGTGAAGGAAATGAAGTCCGAACGACAGATTCAGCTGATTCGAGAGATGCTCATGTGTGACACATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000546786.5 ENST00000548247.1 ENST00000550149.5 |
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| CDS CCA 72 bp | CCTAAGTGCTACAGGACAGAAACAGGGGCAGGACATTaGGTAGTCAATTCAAATGTTGATTTCCTTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PKCYRTETGAGH*VVNSNVDFLWL Trigger: GAGCCAAAGGAAATCAACATTTGAATTGACTACCCAATGTCCTGCCCCTGTTTCTGTCCTGTAGCACTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000546764.5 ENST00000547905.5 ENST00000548644.5 |
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| CDS TCA 72 bp | AATAGGAAAGAGCATGTCAGTTCATTAGCAAGTGACTaGCCAACAAGAAAATGTGGTTCTTCAAGTCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: NRKEHVSSLASD*PTRKCGSSSQA Trigger: GGCTTGACTTGAAGAACCACATTTTCTTGTTGGTCAGTCACTTGCTAATGAACTGACATGCTCTTTCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551876.5 |
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| CDS CAA 72 bp | CCATCTTTCTTTGAATATAACAGCCCCTCCAATCACTaGGAGCAGAAAACAAATAGGAAAGAGCATGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PSFFEYNSPSNH*EQKTNRKEHVS Trigger: ACTGACATGCTCTTTCCTATTTGTTTTCTGCTCCAAGTGATTGGAGGGGCTGTTATATTCAAAGAAAGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551876.5 |
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| CDS CAA 72 bp | CACTTAAATTCCATGACTCATCCTATTCAACGTCAATaGAAAATAGTTGTAATTTTCCTGCTGGGTCACATT | + |
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Preference number: 6 (lower is better) Translates to: HLNSMTHPIQRQ*KIVVIFLLGHI Trigger: AATGTGACCCAGCAGGAAAATTACAACTATTTTCAATTGACGTTGAATAGGATGAGTCATGGAATTTAAGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427314.6 |
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| CDS CAA 72 bp | AGCATCATAGTATCCATCTTTCCTATTCAACGTCAATaGAAAATAGTTGTAATTTTCCTGCTGGGTCACATT | + |
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Preference number: 6 (lower is better) Translates to: SIIVSIFPIQRQ*KIVVIFLLGHI Trigger: AATGTGACCCAGCAGGAAAATTACAACTATTTTCAATTGACGTTGAATAGGAAAGATGGATACTATGATGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000549777.5 ENST00000550651.5 |
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| CDS CAA 72 bp | ATTCAGCATCATAGTATCCATCCTATTCAACGTCAATaGAAAATAGTTGTAATTTTCCTGCTGGGTCACATT | + |
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Preference number: 6 (lower is better) Translates to: IQHHSIHPIQRQ*KIVVIFLLGHI Trigger: AATGTGACCCAGCAGGAAAATTACAACTATTTTCAATTGACGTTGAATAGGATGGATACTATGATGCTGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552004.2 |
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