Pregenerated sensors for RAC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136238Ensembl transcript IDs: ENST00000348035.9, ENST00000356142.4, ENST00000473564.1, ENST00000488373.5, ENST00000495499.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAAATTCTGTTGTAGTGGCTGAAGGGTCCCACGCTGTATTCTCGCCAGTGAGTACTGATCCAAAGAGCTaGGCTGCTACGCTCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: KNSVVVAEGSHAVFSPVSTDPKS*AATLTP Trigger: TGGAGTGAGCGTAGCAGCTCAGCTCTTTGGATCAGT...ACTCACTGGCGAGAATACAGCGTGGGACCCTTCAGCCACTACAACAGAATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCTACGCTCACTCCATTACAGTACAATGTTATGTCGGGAACACGTGCTGCTATCTGCACCTCCTAACTaGAGAAGCTACCGTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LLRSLHYSTMLCREHVLLSAPPN*RSYRLL Trigger: GAGAAGACGGTAGCTTCTGCAGTTAGGAGGTGCAGA...TAGCAGCACGTGTTCCCGACATAACATTGTACTGTAATGGAGTGAGCGTAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAATTCTGTTGTAGTGGCTGAAGGGTCCCACGCTGTATTCTCGCCAGTGAGTCTTTGCAAAGTTCAGTaGTCGGTGTTCTCGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: KNSVVVAEGSHAVFSPVSLCKVQ*SVFSAQ Trigger: TTGTGCCGAGAACACCGAGCACTGAACTTTGCAAAG...ACTCACTGGCGAGAATACAGCGTGGGACCCTTCAGCCACTACAACAGAATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCTACGCTCACTCCATTACAGTACAATGTTATGTCGGGAACACGTGCTGCTATCTGCTTTACGCATCTaGGAACTACATAGGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLRSLHYSTMLCREHVLLSALRI*ELHRRA Trigger: TGCTCTCCTATGTAGTTCTCAGATGCGTAAAGCAGA...TAGCAGCACGTGTTCCCGACATAACATTGTACTGTAATGGAGTGAGCGTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| CDS-3UTR TCA 90 bp | CTGCTACGCTCACTCCATTACAGTACAATGTTATGTCGGGAACACGTGCTGCTAACTGATCCAAAGAGCTaGGCTGCTACGCTCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLRSLHYSTMLCREHVLLTDPKS*AATLTP Trigger: TGGAGTGAGCGTAGCAGCTCAGCTCTTTGGATCAGT...TAGCAGCACGTGTTCCCGACATAACATTGTACTGTAATGGAGTGAGCGTAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| CDS-3UTR TCA 90 bp | AGCTGCTACGCTCACTCCATTACAGTACAATGTTATGTCGGGAACACGTGCTGCTTCTGTTGTAGTGGCTaGAGGGTCCCACGCTGTATT | + |
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Preference number: 4 (lower is better) Translates to: SCYAHSITVQCYVGNTCCFCCSG*RVPRCI Trigger: AATACAGCGTGGGACCCTTCAGCCACTACAACAGAA...GCAGCACGTGTTCCCGACATAACATTGTACTGTAATGGAGTGAGCGTAGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| CDS-3UTR TCA 90 bp | AAAAATTCTGTTGTAGTGGCTGAAGGGTCCCACGCTGTATTCTCGCCAGTGAGTCTGCTAACTCACTGGTaGGTTCAATGGCAACGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KNSVVVAEGSHAVFSPVSLLTHW*VQWQRF Trigger: GAAGCGTTGCCATTGAACTCACCAGTGAGTTAGCAG...ACTCACTGGCGAGAATACAGCGTGGGACCCTTCAGCCACTACAACAGAATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| CDS-3UTR GCA 90 bp | AGCTGCTACGCTCACTCCATTACAGTACAATGTTATGTCGGGAACACGTGCTGCCTTTGCAAAGTTCAGTaGTCGGTGTTCTCGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: SCYAHSITVQCYVGNTCCLCKVQ*SVFSAQ Trigger: TTGTGCCGAGAACACCGAGCACTGAACTTTGCAAAG...GCAGCACGTGTTCCCGACATAACATTGTACTGTAATGGAGTGAGCGTAGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| CDS-3UTR GCA 90 bp | CTGCTACGCTCACTCCATTACAGTACAATGTTATGTCGGGAACACGTGCTGCTATCCAAAGAGCTGAGCTaGTACGCTCACTCCATTACA | + |
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Preference number: 4 (lower is better) Translates to: LLRSLHYSTMLCREHVLLSKELS*YAHSIT Trigger: TGTAATGGAGTGAGCGTAGCAGCTCAGCTCTTTGGA...TAGCAGCACGTGTTCCCGACATAACATTGTACTGTAATGGAGTGAGCGTAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| CDS-3UTR TCA 90 bp | AAAAATTCTGTTGTAGTGGCTGAAGGGTCCCACGCTGTATTCTCGCCAGTGAGTTCTGCTTTACGCATCTaGGAACTACATAGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KNSVVVAEGSHAVFSPVSSALRI*ELHRRA Trigger: TGCTCTCCTATGTAGTTCTCAGATGCGTAAAGCAGA...ACTCACTGGCGAGAATACAGCGTGGGACCCTTCAGCCACTACAACAGAATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000348035.9 |
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| CDS TCA 90 bp | GTTGGACGCAGAGCGTGTCTACCAGTGGTGTGGTCAGACGCTTCCTaGTCCACCCTTTCAGTTTGTCAGAGGGCTCCCAAACCAAACCCA | + |
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Preference number: 5 (lower is better) Translates to: VGRRACLPVVWSDAS*STLSVCQRAPKPNP Trigger: TGGGTTTGGTTTGGGAGCCCTCTGACAAACTGAAAGGGTGGATCAGGAAGCGTCTGACCACACCACTGGTAGACACGCTCTGCGTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CCA 90 bp | CATGTTGCTGGGAAGGACTTGTTGGACGCAGAGCGTGTCTACCAGTaGTGTGGTCAGACGCTTCCTGATCCACCCTTTCAGTTTGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: HVAGKDLLDAERVYQ*CGQTLPDPPFQFVR Trigger: TCTGACAAACTGAAAGGGTGGATCAGGAAGCGTCTGACCACACCACTGGTAGACACGCTCTGCGTCCAACAAGTCCTTCCCAGCAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CCA 72 bp | GGGAAGGACTTGTTGGACGCAGAGCGTGTCTACCAGTaGTGTGGTCAGACGCTTCCTGATCCACCCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GKDLLDAERVYQ*CGQTLPDPPFQ Trigger: CTGAAAGGGTGGATCAGGAAGCGTCTGACCACACCACTGGTAGACACGCTCTGCGTCCAACAAGTCCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CAA 90 bp | TCTACCAGTGGTGTGGTCAGACGCTTCCTGATCCACCCTTTCAGTTaGTCAGAGGGCTCCCAAACCAAACCCAGCATGTCAAGCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: STSGVVRRFLIHPFS*SEGSQTKPSMSSHQ Trigger: CTGGTGGCTTGACATGCTGGGTTTGGTTTGGGAGCCCTCTGACAAACTGAAAGGGTGGATCAGGAAGCGTCTGACCACACCACTGGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS TCA 72 bp | AGAGCGTGTCTACCAGTGGTGTGGTCAGACGCTTCCTaGTCCACCCTTTCAGTTTGTCAGAGGGCTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RACLPVVWSDAS*STLSVCQRAPK Trigger: TTTGGGAGCCCTCTGACAAACTGAAAGGGTGGATCAGGAAGCGTCTGACCACACCACTGGTAGACACGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS TCA 72 bp | GCAACGCTGAGACGCGCGATTTTGCTCGGGTTACACTaGGATTCTTGTTTCCGTCTCCCACCACCACACACT | + |
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Preference number: 6 (lower is better) Translates to: ATLRRAILLGLH*DSCFRLPPPHT Trigger: AGTGTGTGGTGGTGGGAGACGGAAACAAGAATCTCAGTGTAACCCGAGCAAAATCGCGCGTCTCAGCGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488373.5 |
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| CDS CAA 72 bp | GGTGTGGTCAGACGCTTCCTGATCCACCCTTTCAGTTaGTCAGAGGGCTCCCAAACCAAACCCAGCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: GVVRRFLIHPFS*SEGSQTKPSMS Trigger: TGACATGCTGGGTTTGGTTTGGGAGCCCTCTGACAAACTGAAAGGGTGGATCAGGAAGCGTCTGACCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CAA 72 bp | GCACTTTGCTTTCTACATGTTGCTGGGAAGGACTTGTaGGACGCAGAGCGTGTCTACCAGTGGTGTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALCFLHVAGKDL*DAERVYQWCGQ Trigger: CTGACCACACCACTGGTAGACACGCTCTGCGTCCAACAAGTCCTTCCCAGCAACATGTAGAAAGCAAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CAA 90 bp | CCTCCCCACGGAGGCTTCAGGTGGTTCCCACCTTCAATTCAAGCCTaGAGCCATAAGGAACATCTCAGGTGTTCCATTAGCAAGCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: PPHGGFRWFPPSIQA*SHKEHLRCSISKLG Trigger: TCCTAGCTTGCTAATGGAACACCTGAGATGTTCCTTATGGCTCAAGGCTTGAATTGAAGGTGGGAACCACCTGAAGCCTCCGTGGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495499.1 |
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| CDS CAA 90 bp | ATGAAGCATGCACTTTGCTTTCTACATGTTGCTGGGAAGGACTTGTaGGACGCAGAGCGTGTCTACCAGTGGTGTGGTCAGACGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: MKHALCFLHVAGKDL*DAERVYQWCGQTLP Trigger: AGGAAGCGTCTGACCACACCACTGGTAGACACGCTCTGCGTCCAACAAGTCCTTCCCAGCAACATGTAGAAAGCAAAGTGCATGCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CCA 72 bp | CACTTTGCTTTCTACATGTTGCTGGGAAGGACTTGTTaGACGCAGAGCGTGTCTACCAGTGGTGTGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: HFAFYMLLGRTC*TQSVSTSGVVR Trigger: TCTGACCACACCACTGGTAGACACGCTCTGCGTCCAACAAGTCCTTCCCAGCAACATGTAGAAAGCAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CAA 72 bp | CATGCACTTTGCTTTCTACATGTTGCTGGGAAGGACTaGTTGGACGCAGAGCGTGTCTACCAGTGGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: HALCFLHVAGKD*LDAERVYQWCG Trigger: ACCACACCACTGGTAGACACGCTCTGCGTCCAACAAGTCCTTCCCAGCAACATGTAGAAAGCAAAGTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CAA 90 bp | AGAATGAAGCATGCACTTTGCTTTCTACATGTTGCTGGGAAGGACTaGTTGGACGCAGAGCGTGTCTACCAGTGGTGTGGTCAGACGCTT | + |
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Preference number: 6 (lower is better) Translates to: RMKHALCFLHVAGKD*LDAERVYQWCGQTL Trigger: AAGCGTCTGACCACACCACTGGTAGACACGCTCTGCGTCCAACAAGTCCTTCCCAGCAACATGTAGAAAGCAAAGTGCATGCTTCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473564.1 |
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| CDS CAA 72 bp | GGAGGCTTCAGGTGGTTCCCACCTTCAATTCAAGCCTaGAGCCATAAGGAACATCTCAGGTGTTCCATTAGC | + |
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Preference number: 6 (lower is better) Translates to: GGFRWFPPSIQA*SHKEHLRCSIS Trigger: GCTAATGGAACACCTGAGATGTTCCTTATGGCTCAAGGCTTGAATTGAAGGTGGGAACCACCTGAAGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495499.1 |
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| CDS TCA 72 bp | AGGCAAGTTTTACCTACAGCTCTATACAAGCAACGCTaGGACGCGCGATTTTGCTCGGGTTACACTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: RQVLPTALYKQR*DARFCSGYTEI Trigger: AATCTCAGTGTAACCCGAGCAAAATCGCGCGTCTCAGCGTTGCTTGTATAGAGCTGTAGGTAAAACTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488373.5 |
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| CDS GCA 72 bp | AGCAAATTAAGAACACATCGGCAATCGGCTTGTCTTTaGCCCGGGAGGTTATATCCTTACCGTACGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SKLRTHRQSACL*PGRLYPYRTFL Trigger: GAGAAACGTACGGTAAGGATATAACCTCCCGGGGCAAAGACAAGCCGATTGCCGATGTGTTCTTAATTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356142.4 |
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| CDS CAA 72 bp | AAGCAAATTAAGAACACATCGGCAATCGGCTTGTCTTaGCCCCGGGAGGTTATATCCTTACCGTACGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KQIKNTSAIGLS*PREVISLPYVS Trigger: AGAAACGTACGGTAAGGATATAACCTCCCGGGGCAAAGACAAGCCGATTGCCGATGTGTTCTTAATTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356142.4 |
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