Pregenerated sensors for RABL2A (Homo sapiens)
Ensembl gene IDs: ENSG00000144134Ensembl transcript IDs: ENST00000450954.5, ENST00000452831.5, ENST00000476236.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTGGTCACGTTTATGTCTaGATGATGCAGGCATGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSGHVYV*MMQAWA Trigger: GGCCCATGCCTGCATCATGCAGACATAAACGTGACC...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452831.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTACGTTTATGTCTGCATaGTGCAGGCATGGGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSTFMSA*CRHGPC Trigger: ACAAGGCCCATGCCTGCATCATGCAGACATAAACGT...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452831.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTATCGAATTGCATCATTaGAGAGCTTCACAACATTGG | + |
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Preference number: 2 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSIELHH*RASQHW Trigger: CCAATGTTGTGAAGCTCTTCAATGATGCAATTCGAT...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452831.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTGCATCATTGAAGAGCTaGCTAGCTACCTCTGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSASLKS*LATSAV Trigger: GACTGCAGAGGTAGCTAGCAAGCTCTTCAATGATGC...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450954.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTAATCGAATTGCATCATaGAAGAGCTTGCTAGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSNRIAS*KSLLAT Trigger: GGTAGCTAGCAAGCTCTTCAATGATGCAATTCGATT...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450954.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTAATCGAATTGCATCATaGAAGAGCTTCACAACATTG | + |
|
Preference number: 3 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSNRIAS*KSFTTL Trigger: CAATGTTGTGAAGCTCTTCAATGATGCAATTCGATT...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452831.5 |
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| CDS-3UTR CCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTCGTGGACAGCTGCTGTaGCTGAAAGCCATCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSRGQLL*LKAIHE Trigger: CTCATGGATGGCTTTCAGCCACAGCAGCTGTCCACG...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450954.5 |
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| CDS-3UTR CCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTTTAAAAACAGATGATTaGGGCCGGGCGCGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSLKTDD*GRARWL Trigger: GAGCCACCGCGCCCGGCCCCAATCATCTGTTTTTAA...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000450954.5 ENST00000452831.5 |
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| CDS-3UTR TCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTTTGTTTAAAAACAGATaGTTGGGGCCGGGCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSLFKNR*LGPGAV Trigger: CACCGCGCCCGGCCCCAATCATCTGTTTTTAAACAA...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000450954.5 ENST00000452831.5 |
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| CDS-3UTR TCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTGACAGCTGCTGTGGCTaGAAGCCATCCATGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSDSCCG*KPSMRN Trigger: ATTTCTCATGGATGGCTTTCAGCCACAGCAGCTGTC...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450954.5 |
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| CDS-3UTR CCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTCGTGGACAGCTGCTGTaGAAGCCATCCATGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSRGQLL*KPSMRN Trigger: ATTTCTCATGGATGGCTTCCACAGCAGCTGTCCACG...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452831.5 |
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| CDS-3UTR TCA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTGAATTGTCCCCGAGGTaGGCTTTGGAAAGAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSELSPR*ALERKQ Trigger: TTGTTTTCTTTCCAAAGCTCACCTCGGGGACAATTC...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000450954.5 ENST00000452831.5 |
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| CDS-3UTR CAA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTCCAGGGAGTCAGAGGTaGCAGCGAGCCGAGACTGCG | + |
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Preference number: 5 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSPGSQR*QRAETA Trigger: CGCAGTCTCGGCTCGCTGCAACCTCTGACTCCCTGG...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000450954.5 ENST00000452831.5 |
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| CDS-3UTR CAA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTAGGGAGGGGAGGGTATaGTCAGTGCGGTTCCGAGTG | + |
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Preference number: 5 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSREGRV*SVRFRV Trigger: CACTCGGAACCGCACTGACAATACCCTCCCCTCCCT...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452831.5 |
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| CDS-3UTR CAA 90 bp | TCTGATGGGGTCTCGATGCTGCTGCTCTGTTCCTGGTCTGGCACGTCCTCCTCTAATCTCTCCATGAGTTaGGATTTGCCCACTGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SDGVSMLLLCSWSGTSSSNLSMS*DLPTAL Trigger: CAGCGCAGTGGGCAAATCCAAACTCATGGAGAGATT...AGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000450954.5 ENST00000452831.5 |
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| CDS CCA 72 bp | CAGGCTCCAGGGGCTCCTCTCACCTGTGGTTCTCAGTaGATCCACTTGGGAAGCTGTTTAAAAATCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QAPGAPLTCGSQ*IHLGSCLKISQ Trigger: CTGGGAGATTTTTAAACAGCTTCCCAAGTGGATCCACTGAGAACCACAGGTGAGAGGAGCCCCTGGAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476236.1 |
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