Pregenerated sensors for RABGAP1L-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000227373Ensembl transcript IDs: ENST00000419983.5, ENST00000426899.6, ENST00000454467.5, ENST00000656058.1, ENST00000659243.1, ENST00000665650.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CATTGCTGCCTCGGCGGCTGCCGCCCGCTGCTACGCTGTGGCTGCTaGTGGATTCGCAGTCCCAGCCGCCCTGCGTCCGGTGGGCGAGTG | + |
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Preference number: 5 (lower is better) Translates to: HCCLGGCRPLLRCGC*WIRSPSRPASGGRV Trigger: CACTCGCCCACCGGACGCAGGGCGGCTGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAGGCAGCAATG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS CCA 90 bp | TGCTGCCTCGGCGGCTGCCGCCCGCTGCTACGCTGTGGCTGCTGCTaGATTCGCAGTCCCAGCCGCCCTGCGTCCGGTGGGCGAGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: CCLGGCRPLLRCGCC*IRSPSRPASGGRVV Trigger: AACCACTCGCCCACCGGACGCAGGGCGGCTGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAGGCAGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 90 bp | TCCTGGGGGTGGGGTAGTGGCTTTGGCGGCCGCCTCCTCCAGCTGTaGCCTCCTGACATTGCTGCCTCGGCGGCTGCCGCCCGCTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: SWGWGSGFGGRLLQL*PPDIAASAAAARCY Trigger: GTAGCAGCGGGCGGCAGCCGCCGAGGCAGCAATGTCAGGAGGGCACAGCTGGAGGAGGCGGCCGCCAAAGCCACTACCCCACCCCCAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000419983.5 ENST00000659243.1 |
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| CDS GCA 90 bp | ACCTGGGGGTGGGGTAGTGGCTTTGGCGGCCGCCTCCTCCAGCTGTaGCCTCCTGACATTGCTGCCTCGGCGGCTGCCGCCCGCTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: TWGWGSGFGGRLLQL*PPDIAASAAAARCY Trigger: GTAGCAGCGGGCGGCAGCCGCCGAGGCAGCAATGTCAGGAGGGCACAGCTGGAGGAGGCGGCCGCCAAAGCCACTACCCCACCCCCAGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000426899.6 |
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| CDS CCA 90 bp | CTCCTGACATTGCTGCCTCGGCGGCTGCCGCCCGCTGCTACGCTGTaGCTGCTGCTGGATTCGCAGTCCCAGCCGCCCTGCGTCCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLTLLPRRLPPAATL*LLLDSQSQPPCVRW Trigger: CCACCGGACGCAGGGCGGCTGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAGGCAGCAATGTCAGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 90 bp | CAGCTGTGCCCTCCTGACATTGCTGCCTCGGCGGCTGCCGCCCGCTaGTACGCTGTGGCTGCTGCTGGATTCGCAGTCCCAGCCGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QLCPPDIAASAAAAR*YAVAAAGFAVPAAL Trigger: CAGGGCGGCTGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAGGCAGCAATGTCAGGAGGGCACAGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 90 bp | GGAGGTTCTCCAGCGCCGCCCGTACTCCCGCCTTTCGCGCGTCCCTaGTCTAACAGCTCTGGTTCTGTCAGGACCTCACTCCTCCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GGSPAPPVLPPFARP*SNSSGSVRTSLLRS Trigger: GGAGCGGAGGAGTGAGGTCCTGACAGAACCAGAGCTGTTAGAGCAGGGACGCGCGAAAGGCGGGAGTACGGGCGGCGCTGGAGAACCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CCA 90 bp | GCTGCTGGATTCGCAGTCCCAGCCGCCCTGCGTCCGGTGGGCGAGTaGTTAGGGTATTTTCTTACCCACACGCAGGCTTCTGTACTCGAC | + |
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Preference number: 5 (lower is better) Translates to: AAGFAVPAALRPVGE*LGYFLTHTQASVLD Trigger: GTCGAGTACAGAAGCCTGCGTGTGGGTAAGAAAATACCCTAACCACTCGCCCACCGGACGCAGGGCGGCTGGGACTGCGAATCCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 90 bp | GCTCTATCGTCCAGGCTGGAGTGCAGAGGCATGATCACGGCTCACTaGAGCCTTGACCTCTGGGATAATGCGATTCTCTACATCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: ALSSRLECRGMITAH*SLDLWDNAILYISL Trigger: GAGGCTGATGTAGAGAATCGCATTATCCCAGAGGTCAAGGCTGCAGTGAGCCGTGATCATGCCTCTGCACTCCAGCCTGGACGATAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419983.5 ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS TCA 90 bp | CATGAGGGCTTCTCCCCTGTGATTGGATGCTCTTGTAAAAAGGCTTaGTGGAGGCAGTTGTCCCTTTGCCCTTCTGCTTTCCACCATGTG | + |
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Preference number: 5 (lower is better) Translates to: HEGFSPVIGCSCKKA*WRQLSLCPSAFHHV Trigger: CACATGGTGGAAAGCAGAAGGGCAAAGGGACAACTGCCTCCATCAAGCCTTTTTACAAGAGCATCCAATCACAGGGGAGAAGCCCTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS TCA 90 bp | GTGGTGCCTTTAAGAAGTGATTGGGCCATGAGGGCTTCTCCCCTGTaGTTGGATGCTCTTGTAAAAAGGCTTGATGGAGGCAGTTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: VVPLRSDWAMRASPL*LDALVKRLDGGSCP Trigger: GGGACAACTGCCTCCATCAAGCCTTTTTACAAGAGCATCCAATCACAGGGGAGAAGCCCTCATGGCCCAATCACTTCTTAAAGGCACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS TCA 90 bp | TGCCCTCCAAAATTCAGGTATTGTCAATGTGGTGCCTTTAAGAAGTaGTTGGGCCATGAGGGCTTCTCCCCTGTGATTGGATGCTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: CPPKFRYCQCGAFKK*LGHEGFSPVIGCSC Trigger: ACAAGAGCATCCAATCACAGGGGAGAAGCCCTCATGGCCCAATCACTTCTTAAAGGCACCACATTGACAATACCTGAATTTTGGAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS TCA 90 bp | TATAGGCATGAGTCACTGCATCTGTTACATCTTTCGCTCTCTCGGTaGTTTCTCCCTTCCTCCAGTAGCCAGTGCCTCTTTTCCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: YRHESLHLLHLSLSR*FLPSSSSQCLFSKS Trigger: AGATTTGGAAAAGAGGCACTGGCTACTGGAGGAAGGGAGAAATCACCGAGAGAGCGAAAGATGTAACAGATGCAGTGACTCATGCCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS TCA 90 bp | TGGGATTATAGGCATGAGTCACTGTTACATCTTTCGCTCTCTCGGTaGTTTCTCCCTTCCTCCAGTAGCCAGTGCCTCTTTTCCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: WDYRHESLLHLSLSR*FLPSSSSQCLFSKS Trigger: AGATTTGGAAAAGAGGCACTGGCTACTGGAGGAAGGGAGAAATCACCGAGAGAGCGAAAGATGTAACAGTGACTCATGCCTATAATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454467.5 |
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| CDS TCA 90 bp | CTTCTGTATCTCCAGTTTTACCTGTTACATCTTTCGCTCTCTCGGTaGTTTCTCCCTTCCTCCAGTAGCCAGTGCCTCTTTTCCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: LLYLQFYLLHLSLSR*FLPSSSSQCLFSKS Trigger: AGATTTGGAAAAGAGGCACTGGCTACTGGAGGAAGGGAGAAATCACCGAGAGAGCGAAAGATGTAACAGGTAAAACTGGAGATACAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656058.1 |
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| CDS GCA 90 bp | TTTGCCAACTTCTTCATCATGTCCGTTCTGTGGGTGGTTTATCGTTaGTGTTTAAGTTCAAGCCTGGTTTTACAGCCCTCTCAACAATTC | + |
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Preference number: 5 (lower is better) Translates to: FANFFIMSVLWVVYR*CLSSSLVLQPSQQF Trigger: GAATTGTTGAGAGGGCTGTAAAACCAGGCTTGAACTTAAACAGCAACGATAAACCACCCACAGAACGGACATGATGAAGAAGTTGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS CCA 90 bp | GGACAGTTGGTAACATTTGCCAACTTCTTCATCATGTCCGTTCTGTaGGTGGTTTATCGTTGCTGTTTAAGTTCAAGCCTGGTTTTACAG | + |
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Preference number: 5 (lower is better) Translates to: GQLVTFANFFIMSVL*VVYRCCLSSSLVLQ Trigger: CTGTAAAACCAGGCTTGAACTTAAACAGCAACGATAAACCACCCACAGAACGGACATGATGAAGAAGTTGGCAAATGTTACCAACTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS TCA 90 bp | TCTTTGCTGAAAATACTTGACCACAATGAATGTGAGACTGAAGGCTaGAGAGTTGCACAGAACACATTGTCCATTACTGCTCTTCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: SLLKILDHNECETEG*RVAQNTLSITALLK Trigger: TTTAAGAAGAGCAGTAATGGACAATGTGTTCTGTGCAACTCTTCAGCCTTCAGTCTCACATTCATTGTGGTCAAGTATTTTCAGCAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS GCA 90 bp | ATGTCTGTGTTTAATTGTGGTGTGGAGAGGAAAGACCATAGGGAATaGCTACAACTAAAAGAATATGACATAGCAAGACAAACATGTTAT | + |
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Preference number: 5 (lower is better) Translates to: MSVFNCGVERKDHRE*LQLKEYDIARQTCY Trigger: ATAACATGTTTGTCTTGCTATGTCATATTCTTTTAGTTGTAGGCATTCCCTATGGTCTTTCCTCTCCACACCACAATTAAACACAGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS GCA 90 bp | CTGAGTGGAATATTTCACTTTACAAATGAGATCTGCTTTTTCCCTTaGTATGAGTCAAAACATTACCTCCCAATCAAGAAATCAACAATG | + |
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Preference number: 5 (lower is better) Translates to: LSGIFHFTNEICFFP*YESKHYLPIKKSTM Trigger: CATTGTTGATTTCTTGATTGGGAGGTAATGTTTTGACTCATAGCAAGGGAAAAAGCAGATCTCATTTGTAAAGTGAAATATTCCACTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS GCA 72 bp | CTCGGCGGCTGCCGCCCGCTGCTACGCTGTGGCTGCTaGTGGATTCGCAGTCCCAGCCGCCCTGCGTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: LGGCRPLLRCGC*WIRSPSRPASG Trigger: ACCGGACGCAGGGCGGCTGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 72 bp | TGCCTCGGCGGCTGCCGCCCGCTGCTACGCTGTGGCTaGTGCTGGATTCGCAGTCCCAGCCGCCCTGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: CLGGCRPLLRCG*CWIRSPSRPAS Trigger: GGACGCAGGGCGGCTGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAGGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS CCA 72 bp | TTGCTGCCTCGGCGGCTGCCGCCCGCTGCTACGCTGTaGCTGCTGCTGGATTCGCAGTCCCAGCCGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLPRRLPPAATL*LLLDSQSQPPC Trigger: GCAGGGCGGCTGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAGGCAGCAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 72 bp | TGGGGTAGTGGCTTTGGCGGCCGCCTCCTCCAGCTGTaGCCTCCTGACATTGCTGCCTCGGCGGCTGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: WGSGFGGRLLQL*PPDIAASAAAA Trigger: GGCGGCAGCCGCCGAGGCAGCAATGTCAGGAGGGCACAGCTGGAGGAGGCGGCCGCCAAAGCCACTACCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419983.5 ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 72 bp | CCTCCTGACATTGCTGCCTCGGCGGCTGCCGCCCGCTaGTACGCTGTGGCTGCTGCTGGATTCGCAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PPDIAASAAAAR*YAVAAAGFAVP Trigger: TGGGACTGCGAATCCAGCAGCAGCCACAGCGTAGCAGCGGGCGGCAGCCGCCGAGGCAGCAATGTCAGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS GCA 72 bp | CCAGCGCCGCCCGTACTCCCGCCTTTCGCGCGTCCCTaGTCTAACAGCTCTGGTTCTGTCAGGACCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: PAPPVLPPFARP*SNSSGSVRTSL Trigger: GAGTGAGGTCCTGACAGAACCAGAGCTGTTAGAGCAGGGACGCGCGAAAGGCGGGAGTACGGGCGGCGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CCA 72 bp | TTCGCAGTCCCAGCCGCCCTGCGTCCGGTGGGCGAGTaGTTAGGGTATTTTCTTACCCACACGCAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FAVPAALRPVGE*LGYFLTHTQAS Trigger: AGAAGCCTGCGTGTGGGTAAGAAAATACCCTAACCACTCGCCCACCGGACGCAGGGCGGCTGGGACTGCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426899.6 ENST00000659243.1 |
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| CDS CAA 72 bp | CCTCCCCTCCAGAGGATGCAGCAACAAGGCACCATCTaGGAAGTAGAGACTGGACCCTCACCAGACAACAAA | + |
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Preference number: 6 (lower is better) Translates to: PPLQRMQQQGTI*EVETGPSPDNK Trigger: TTTGTTGTCTGGTGAGGGTCCAGTCTCTACTTCCAAGATGGTGCCTTGTTGCTGCATCCTCTGGAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS GCA 72 bp | CATCCAGGCTGGAGTGGTGACACAATCTCGGATCACTaGAACCTCTGCTTACCAGGTTCAAGCAATCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HPGWSGDTISDH*NLCLPGSSNPP Trigger: TGGAGGATTGCTTGAACCTGGTAAGCAGAGGTTGCAGTGATCCGAGATTGTGTCACCACTCCAGCCTGGATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 90 bp | CACAGTGTTCCTCCCCTCCAGAGGATGCAGCAACAAGGCACCATCTaGGAAGTAGAGACTGGACCCTCACCAGACAACAAATCTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: HSVPPLQRMQQQGTI*EVETGPSPDNKSAI Trigger: AATGGCAGATTTGTTGTCTGGTGAGGGTCCAGTCTCTACTTCCAAGATGGTGCCTTGTTGCTGCATCCTCTGGAGGGGAGGAACACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS TCA 72 bp | GAGTCACTGCATCTGTTACATCTTTCGCTCTCTCGGTaGTTTCTCCCTTCCTCCAGTAGCCAGTGCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ESLHLLHLSLSR*FLPSSSSQCLF Trigger: AAAGAGGCACTGGCTACTGGAGGAAGGGAGAAATCACCGAGAGAGCGAAAGATGTAACAGATGCAGTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS TCA 72 bp | AGGCATGAGTCACTGTTACATCTTTCGCTCTCTCGGTaGTTTCTCCCTTCCTCCAGTAGCCAGTGCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RHESLLHLSLSR*FLPSSSSQCLF Trigger: AAAGAGGCACTGGCTACTGGAGGAAGGGAGAAATCACCGAGAGAGCGAAAGATGTAACAGTGACTCATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454467.5 |
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| CDS CCA 72 bp | GATGCAGCAACAAGGCACCATCTTGGAAGTAGAGACTaGACCCTCACCAGACAACAAATCTGCCATTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: DAATRHHLGSRD*TLTRQQICHCL Trigger: AAGGCAATGGCAGATTTGTTGTCTGGTGAGGGTCCAGTCTCTACTTCCAAGATGGTGCCTTGTTGCTGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS TCA 72 bp | AAGAGCCTGTTTCTGTTACATCTTTCGCTCTCTCGGTaGTTTCTCCCTTCCTCCAGTAGCCAGTGCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: KSLFLLHLSLSR*FLPSSSSQCLF Trigger: AAAGAGGCACTGGCTACTGGAGGAAGGGAGAAATCACCGAGAGAGCGAAAGATGTAACAGAAACAGGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419983.5 |
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| CDS TCA 72 bp | CTCCAGTTTTACCTGTTACATCTTTCGCTCTCTCGGTaGTTTCTCCCTTCCTCCAGTAGCCAGTGCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LQFYLLHLSLSR*FLPSSSSQCLF Trigger: AAAGAGGCACTGGCTACTGGAGGAAGGGAGAAATCACCGAGAGAGCGAAAGATGTAACAGGTAAAACTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656058.1 |
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| CDS TCA 72 bp | TTCTCCCCTGTGATTGGATGCTCTTGTAAAAAGGCTTaGTGGAGGCAGTTGTCCCTTTGCCCTTCTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSPVIGCSCKKA*WRQLSLCPSAF Trigger: GAAAGCAGAAGGGCAAAGGGACAACTGCCTCCATCAAGCCTTTTTACAAGAGCATCCAATCACAGGGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS TCA 72 bp | TTAAGAAGTGATTGGGCCATGAGGGCTTCTCCCCTGTaGTTGGATGCTCTTGTAAAAAGGCTTGATGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LRSDWAMRASPL*LDALVKRLDGG Trigger: GCCTCCATCAAGCCTTTTTACAAGAGCATCCAATCACAGGGGAGAAGCCCTCATGGCCCAATCACTTCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 72 bp | ACTGGACCCTCACCAGACAACAAATCTGCCATTGCCTaGATCTTAGATTTCCCAGCCTCCAGAACTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TGPSPDNKSAIA*ILDFPASRTVR Trigger: TCTCACAGTTCTGGAGGCTGGGAAATCTAAGATCAAGGCAATGGCAGATTTGTTGTCTGGTGAGGGTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 90 bp | ATCTTAGATTTCCCAGCCTCCAGAACTGTGAGAAATAAATTTCTATaGTTCATAAATTACCTAGTCTGGCCGGGCGCTGTGGCTCACGCC | + |
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Preference number: 6 (lower is better) Translates to: ILDFPASRTVRNKFL*FINYLVWPGAVAHA Trigger: GGCGTGAGCCACAGCGCCCGGCCAGACTAGGTAATTTATGAACAATAGAAATTTATTTCTCACAGTTCTGGAGGCTGGGAAATCTAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 72 bp | CGTGAGTTCCCATTGTATAAGTGGCCAAAGGGCAAATaGTGTTGTCTAGTGCTTGATGTCTCTAGTGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: REFPLYKWPKGK*CCLVLDVSSAS Trigger: GCTAGCACTAGAGACATCAAGCACTAGACAACACAATTTGCCCTTTGGCCACTTATACAATGGGAACTCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS TCA 72 bp | CATCATCAAAACAGGAGCCCTGTCCTAGGAGAGAAGTaGAAGGATTTTCCAAGATGTTTATCAAGGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: HHQNRSPVLGEK*KDFPRCLSRET Trigger: GGTCTCCCTTGATAAACATCTTGGAAAATCCTTTCACTTCTCTCCTAGGACAGGGCTCCTGTTTTGATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 72 bp | AGTGGCAATAGAGGTTACTGCAAGCGTGAGTTCCCATaGTATAAGTGGCCAAAGGGCAAATTGTGTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: SGNRGYCKREFP*YKWPKGKLCCL Trigger: TAGACAACACAATTTGCCCTTTGGCCACTTATACAATGGGAACTCACGCTTGCAGTAACCTCTATTGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS CAA 90 bp | TACTGCAAGCGTGAGTTCCCATTGTATAAGTGGCCAAAGGGCAAATaGTGTTGTCTAGTGCTTGATGTCTCTAGTGCTAGCTGTAAGATT | + |
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Preference number: 6 (lower is better) Translates to: YCKREFPLYKWPKGK*CCLVLDVSSASCKI Trigger: AATCTTACAGCTAGCACTAGAGACATCAAGCACTAGACAACACAATTTGCCCTTTGGCCACTTATACAATGGGAACTCACGCTTGCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS CAA 90 bp | GAAGTAGAGACTGGACCCTCACCAGACAACAAATCTGCCATTGCCTaGATCTTAGATTTCCCAGCCTCCAGAACTGTGAGAAATAAATTT | + |
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Preference number: 6 (lower is better) Translates to: EVETGPSPDNKSAIA*ILDFPASRTVRNKF Trigger: AAATTTATTTCTCACAGTTCTGGAGGCTGGGAAATCTAAGATCAAGGCAATGGCAGATTTGTTGTCTGGTGAGGGTCCAGTCTCTACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CCA 72 bp | GTAACATTTGCCAACTTCTTCATCATGTCCGTTCTGTaGGTGGTTTATCGTTGCTGTTTAAGTTCAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VTFANFFIMSVL*VVYRCCLSSSL Trigger: CAGGCTTGAACTTAAACAGCAACGATAAACCACCCACAGAACGGACATGATGAAGAAGTTGGCAAATGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS CAA 90 bp | ATTTGCCAACTTCTTCATCATGTCCGTTCTGTGGGTGGTTTATCGTaGCTGTTTAAGTTCAAGCCTGGTTTTACAGCCCTCTCAACAATT | + |
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Preference number: 6 (lower is better) Translates to: ICQLLHHVRSVGGLS*LFKFKPGFTALSTI Trigger: AATTGTTGAGAGGGCTGTAAAACCAGGCTTGAACTTAAACAGCAACGATAAACCACCCACAGAACGGACATGATGAAGAAGTTGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS GCA 72 bp | GCTAGCTGTAAGATTACCACATTGTCAGTCATACTTTaGCCAGCATTTTTCAGATTTTGGCATGGAAGGATC | + |
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Preference number: 6 (lower is better) Translates to: ASCKITTLSVIL*PAFFRFWHGRI Trigger: GATCCTTCCATGCCAAAATCTGAAAAATGCTGGGCAAAGTATGACTGACAATGTGGTAATCTTACAGCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS CAA 72 bp | TTGACCACAATGAATGTGAGACTGAAGGCTGAAGAGTaGCACAGAACACATTGTCCATTACTGCTCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LTTMNVRLKAEE*HRTHCPLLLFL Trigger: TAAGAAGAGCAGTAATGGACAATGTGTTCTGTGCAACTCTTCAGCCTTCAGTCTCACATTCATTGTGGTCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS CAA 90 bp | GGGCCAGAGATCAAAGAAACAAAGAAGCCTCTTTATAGGGGCTATTaGAGTACTTTACTAGTCCTTAGGCACTTGGTAATTTCACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GPEIKETKKPLYRGY*STLLVLRHLVISQS Trigger: ACTTTGTGAAATTACCAAGTGCCTAAGGACTAGTAAAGTACTCAAATAGCCCCTATAAAGAGGCTTCTTTGTTTCTTTGATCTCTGGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS TCA 72 bp | AAAATACTTGACCACAATGAATGTGAGACTGAAGGCTaGAGAGTTGCACAGAACACATTGTCCATTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: KILDHNECETEG*RVAQNTLSITA Trigger: AGCAGTAATGGACAATGTGTTCTGTGCAACTCTTCAGCCTTCAGTCTCACATTCATTGTGGTCAAGTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS TCA 72 bp | CTTTATATGATGAAGTATTTATGGGTGATATCCATGTaGGGGGTGGGGAAGGAGATTGGCCACATATTGATA | + |
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Preference number: 6 (lower is better) Translates to: LYMMKYLWVISM*GVGKEIGHILI Trigger: TATCAATATGTGGCCAATCTCCTTCCCCACCCCTCACATGGATATCACCCATAAATACTTCATCATATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656058.1 |
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| CDS TCA 72 bp | CTATATTTAGGATATGTCTCACCATGTAAATCTTCGTaGCAAGCAAAGGCTGTTTCCCATAATGGAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LYLGYVSPCKSS*QAKAVSHNGSR Trigger: TCTGCTTCCATTATGGGAAACAGCCTTTGCTTGTCACGAAGATTTACATGGTGAGACATATCCTAAATATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426899.6 ENST00000659243.1 ENST00000665650.1 |
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| CDS GCA 72 bp | TTTAATTGTGGTGTGGAGAGGAAAGACCATAGGGAATaGCTACAACTAAAAGAATATGACATAGCAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: FNCGVERKDHRE*LQLKEYDIARQ Trigger: TTGTCTTGCTATGTCATATTCTTTTAGTTGTAGGCATTCCCTATGGTCTTTCCTCTCCACACCACAATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 90 bp | CCTCTTTATAGGGGCTATTTGAGTACTTTACTAGTCCTTAGGCACTaGGTAATTTCACAAAGTAGATACGATGTATTTGTCAAGGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PLYRGYLSTLLVLRH*VISQSRYDVFVKEI Trigger: GATTTCCTTGACAAATACATCGTATCTACTTTGTGAAATTACCAAGTGCCTAAGGACTAGTAAAGTACTCAAATAGCCCCTATAAAGAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 90 bp | AAGTCAGAAAGGTTTATCCCACTTGAGATTAACGAGCAGTGTAGTTaGTCTTCAACTAAAGTGTTGATGGATAAAAGACAAAAACTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KSERFIPLEINEQCS*SSTKVLMDKRQKLV Trigger: CACCAGTTTTTGTCTTTTATCCATCAACACTTTAGTTGAAGACAAACTACACTGCTCGTTAATCTCAAGTGGGATAAACCTTTCTGACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 72 bp | ATCAAAGAAACAAAGAAGCCTCTTTATAGGGGCTATTaGAGTACTTTACTAGTCCTTAGGCACTTGGTAATT | + |
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Preference number: 6 (lower is better) Translates to: IKETKKPLYRGY*STLLVLRHLVI Trigger: AATTACCAAGTGCCTAAGGACTAGTAAAGTACTCAAATAGCCCCTATAAAGAGGCTTCTTTGTTTCTTTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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| CDS CAA 72 bp | AGGTTTATCCCACTTGAGATTAACGAGCAGTGTAGTTaGTCTTCAACTAAAGTGTTGATGGATAAAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: RFIPLEINEQCS*SSTKVLMDKRQ Trigger: TTGTCTTTTATCCATCAACACTTTAGTTGAAGACAAACTACACTGCTCGTTAATCTCAAGTGGGATAAACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665650.1 |
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