RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RABGAP1L (Homo sapiens)

Ensembl gene IDs: ENSG00000152061

Ensembl transcript IDs: ENST00000251507.8, ENST00000325589.9, ENST00000347255.6, ENST00000357444.10, ENST00000367687.5, ENST00000367688.3, ENST00000367690.5, ENST00000392064.6, ENST00000457696.1, ENST00000465412.5, ENST00000469553.6, ENST00000474375.6, ENST00000478442.5, ENST00000485114.1, ENST00000486220.5, ENST00000487987.1, ENST00000489615.5, ENST00000526253.1, ENST00000529145.6, ENST00000529474.2, ENST00000635248.1, ENST00000681986.1

Found 1143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGTCCCACACCCACGGAGCCTCACTCACTGCTAACACAGCAGTCTaGGATCAAGCCGCAAGTGTCAGCAAGGCTGAGGGAGGGGCATCC +
Preference number: 1 (lower is better)
Translates to: ESHTHGASLTANTAV*DQAASVSKAEGGAS
Trigger: GGATGCCCCTCCCTCAGCCTTGCTGACACTTGCGGCTTGATCTCAGACTGCTGTGTTAGCAGTGAGTGAGGCTCCGTGGGTGTGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CCA 90 bp GTGCTCTCCTTGGGTGGCTGGGTGACCGGTGCTGGCTGCAATGGCTaGGTGCCCGTGGCCGTTTTGATAGAGTTCAGGGTTTTGCTAAAC +
Preference number: 1 (lower is better)
Translates to: VLSLGGWVTGAGCNG*VPVAVLIEFRVLLN
Trigger: GTTTAGCAAAACCCTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 90 bp CTATGTGCTCTCCTTGGGTGGCTGGGTGACCGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGTTTTGATAGAGTTCAGGGTTTTGCT +
Preference number: 1 (lower is better)
Translates to: LCALLGWLGDRCWLQ*LGARGRFDRVQGFA
Trigger: AGCAAAACCCTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAGCACATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR GCA 90 bp AAGACTGAACTGGGTGGAGCCCACCAAAGCTCAAGGAGGCCTGCCTaGCTTCCTGGACTCCAGTACTGGGGGCAGGGCATAGTTGAACAA +
Preference number: 1 (lower is better)
Translates to: KTELGGAHQSSRRPA*LPGLQYWGQGIVEQ
Trigger: TTGTTCAACTATGCCCTGCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCTCCACCCAGTTCAGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CCA 90 bp CACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTaGGGGCAGGGCATAGTTGAACAAACGGCAGCAGAAACTTCTGCA +
Preference number: 1 (lower is better)
Translates to: HQSSRRPACLPGLQY*GQGIVEQTAAETSA
Trigger: TGCAGAAGTTTCTGCTGCCGTTTGTTCAACTATGCCCTGCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR TCA 90 bp CAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGTaGTTTCTGCATTTCCAACAGAGGTACCGGGTTCATCTCACTGGG +
Preference number: 1 (lower is better)
Translates to: QLQSTAPSVSDAEDR*FLHFQQRYRVHLTG
Trigger: CCCAGTGAGATGAACCCGGTACCTCTGTTGGAAATGCAGAAATCACCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR TCA 90 bp GCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGGCAGGGCATAGTTaGACAAACGGCAGCAGAAACTTCTGCAGACTTAAATGTCCCTGT +
Preference number: 1 (lower is better)
Translates to: ACLPSWTPVLGAGHS*TNGSRNFCRLKCPC
Trigger: ACAGGGACATTTAAGTCTGCAGAAGTTTCTGCTGCCGTTTGTTCAACTATGCCCTGCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CCA 90 bp GTCATAGGCTACCATAATGGAGATTTCTTCCATCATCTTGCCAGCTaGCCTTTCCACAGCAGCAGCTGCTGTCCCAGCTCCAGACCAGAC +
Preference number: 1 (lower is better)
Translates to: VIGYHNGDFFHHLAS*PFHSSSCCPSSRPD
Trigger: GTCTGGTCTGGAGCTGGGACAGCAGCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAATCTCCATTATGGTAGCCTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR TCA 90 bp CCAAGATGGCCAAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACAGGTGATTTCTGCATTTCCAACAGAGGT +
Preference number: 1 (lower is better)
Translates to: PRWPKRNSSSLQLPA*ATQKTGDFCISNRG
Trigger: ACCTCTGTTGGAAATGCAGAAATCACCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTTGGCCATCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR GCA 90 bp TGCCATCATCTTACCCTTTACCACTTCCAGCTCCTCCTTGCTGGCTaGTTGCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAGATCTG +
Preference number: 1 (lower is better)
Translates to: CHHLTLYHFQLLLAG*LLFLQPGTQLRTDL
Trigger: CAGATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAGCTGGAAGTGGTAAAGGGTAAGATGATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR GCA 90 bp GAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTaGTTGGGTAAGGCTGGAACTATGTGCTCTCCTTGGGTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: EESSQISIGLNIVLL*LGKAGTMCSPWVAG
Trigger: CCCAGCCACCCAAGGAGAGCACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 90 bp AAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTaGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATC +
Preference number: 1 (lower is better)
Translates to: KHIQVLQVKCVLTLL*DLPILVSQVFKRAI
Trigger: GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR TCA 90 bp GGTCCTCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTaGAAATGTCACTGCAGTGTTTGCATGCCATCATCTTACCCTTTA +
Preference number: 1 (lower is better)
Translates to: GPLCLWLLVSKHPPC*KCHCSVCMPSSYPL
Trigger: TAAAGGGTAAGATGATGGCATGCAAACACTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 90 bp AGCTGCTTCTTAAGTGAGTCCTTCTCATCATCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: SCFLSESFSSSVSIP*SSLPVAASFKAPSL
Trigger: CAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGATGATGAGAAGGACTCACTTAAGAAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR TCA 90 bp TACTCTGTCCCTGGTTCTATATTCCACTCTATTCAGCACAATGGCTaGACCTGGGGCTTTTTAGGCGTCTCTGGTAAAGGCTCCCTAAGT +
Preference number: 1 (lower is better)
Translates to: YSVPGSIFHSIQHNG*TWGFLGVSGKGSLS
Trigger: ACTTAGGGAGCCTTTACCAGAGACGCCTAAAAAGCCCCAGGTTCAGCCATTGTGCTGAATAGAGTGGAATATAGAACCAGGGACAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp CTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAACTATGTGCT +
Preference number: 1 (lower is better)
Translates to: LQRDTRKNPPRFPLV*TLCSCAWVRLELCA
Trigger: AGCACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR TCA 90 bp GAAGACTTAAACCCCTACATCAGTTACACATGTGATTCTCCTGGGTaGCTGGCTCACTCCTTTAAAGATGTAACTCTATCTCCTCTGCCC +
Preference number: 1 (lower is better)
Translates to: EDLNPYISYTCDSPG*LAHSFKDVTLSPLP
Trigger: GGGCAGAGGAGATAGAGTTACATCTTTAAAGGAGTGAGCCAGTCACCCAGGAGAATCACATGTGTAACTGATGTAGGGGTTTAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp GCTGCAGAGCTGTGGTCTGGCCTTCTGGCTTTCATCATCATTTCTTaGAATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAA +
Preference number: 1 (lower is better)
Translates to: AAELWSGLLAFIIIS*NLNVYLVVWYPGKQ
Trigger: TTGTTTACCTGGGTACCACACAACCAAATACACATTGAGATTTCAAGAAATGATGATGAAAGCCAGAAGGCCAGACCACAGCTCTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp ATTTTCCAGGTCTTCAAAGCTCATTTCCTTGCTGTTGAGCTCCAGTaGTTCGGAAATCACACAGGTGGGTTAAATGATGGCTGCCAACAT +
Preference number: 1 (lower is better)
Translates to: IFQVFKAHFLAVELQ*FGNHTGGLNDGCQH
Trigger: ATGTTGGCAGCCATCATTTAACCCACCTGTGTGATTTCCGAATCACTGGAGCTCAACAGCAAGGAAATGAGCTTTGAAGACCTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR TCA 90 bp TTCAAGAGGGCCATCACCCTCACTGGGATTCCCTTCTACCATTGTTaGTGCCTGCAGTTTGAGGGATTTTATAGTGAAATAAGCATCACA +
Preference number: 1 (lower is better)
Translates to: FKRAITLTGIPFYHC*CLQFEGFYSEISIT
Trigger: TGTGATGCTTATTTCACTATAAAATCCCTCAAACTGCAGGCATCAACAATGGTAGAAGGGAATCCCAGTGAGGGTGATGGCCCTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR GCA 90 bp CTGCCTTGTCTTCTGCCTGATCCAAGTCATTCCGTAGAGCAATTTTaGTTGTTACTAGTTCATGGGCAAGGTCATCATTCTCTTGTTCCA +
Preference number: 1 (lower is better)
Translates to: LPCLLPDPSHSVEQF*LLLVHGQGHHSLVP
Trigger: TGGAACAAGAGAATGATGACCTTGCCCATGAACTAGTAACAAGCAAAATTGCTCTACGGAATGACTTGGATCAGGCAGAAGACAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 90 bp TATCTGGTTGTAGGAAACAGGCTGCAGAGCTGTGGTCTGGCCTTCTaGCTTTCATCATCATTTCTTGAAATCTCAATGTGTATTTGGTTG +
Preference number: 1 (lower is better)
Translates to: YLVVGNRLQSCGLAF*LSSSFLEISMCIWL
Trigger: CAACCAAATACACATTGAGATTTCAAGAAATGATGATGAAAGCCAGAAGGCCAGACCACAGCTCTGCAGCCTGTTTCCTACAACCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp CATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTTTCATaGCACCAGAGTCTTTCGATGCATTTATATTCTCACAATTCAGTC +
Preference number: 1 (lower is better)
Translates to: HLGSGTISSLILVLS*HQSLSMHLYSHNSV
Trigger: GACTGAATTGTGAGAATATAAATGCATCGAAAGACTCTGGTGTCATGAAAGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR GCA 90 bp AACTCATTAGTTATGGAAACTTCTTGCAGCAATTCAGTATCCTTCTaGAGCAGCATTTCTCTCTCTCCAAGCAGCAGATTTTCCAGGTCT +
Preference number: 1 (lower is better)
Translates to: NSLVMETSCSNSVSF*SSISLSPSSRFSRS
Trigger: AGACCTGGAAAATCTGCTGCTTGGAGAGAGAGAAATGCTGCTGCAGAAGGATACTGAATTGCTGCAAGAAGTTTCCATAACTAATGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR CCA 90 bp CAGATGTACCGAACAGAAAATGAAAGTAAACCAATGATCGCTGATTaGTTCTTTCCTTTGGACAGGATTAACACTTCCCTGGGAATCAGG +
Preference number: 1 (lower is better)
Translates to: QMYRTENESKPMIAD*FFPLDRINTSLGIR
Trigger: CCTGATTCCCAGGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGGTTTACTTTCATTTTCTGTTCGGTACATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
3UTR CCA 90 bp ATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTaGGATGTAGATGGCTCTTATTTGATTCTTCTAAGGGTGTGTTAC +
Preference number: 1 (lower is better)
Translates to: ILEEKIHCEQLGASS*DVDGSYLILLRVCY
Trigger: GTAACACACCCTTAGAAGAATCAAATAAGAGCCATCTACATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp CAAAGGTTGCTTTTCTACTTTACTCAGGACATTTCAGAAAGCCAATaGAGAAGTACTAATTTAACAGCTGGGAGAGGGGCAGAAGACACT +
Preference number: 1 (lower is better)
Translates to: QRLLFYFTQDISESQ*RSTNLTAGRGAEDT
Trigger: AGTGTCTTCTGCCCCTCTCCCAGCTGTTAAATTAGTACTTCTTCATTGGCTTTCTGAAATGTCCTGAGTAAAGTAGAAAAGCAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp CATTATGAGAGAGGAAGAATGTGTTGGGACAGTTCTAGTTCAGTGTaGCTATCAGCATGGCGACGAGAAAGAGTTTTATATCTGGTTGTA +
Preference number: 1 (lower is better)
Translates to: HYERGRMCWDSSSSV*LSAWRRERVLYLVV
Trigger: TACAACCAGATATAAAACTCTTTCTCGTCGCCATGCTGATAGTCACACTGAACTAGAACTGTCCCAACACATTCTTCCTCTCTCATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CCA 90 bp TTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTaGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCAC +
Preference number: 1 (lower is better)
Translates to: FSTDRGKFETSLCQS*NSSPAKSLCGYDMH
Trigger: GTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
3UTR TCA 90 bp CACTTCATTTCCAGATGTACCGAACAGAAAATGAAAGTAAACCAATaGTCGCTGATTGGTTCTTTCCTTTGGACAGGATTAACACTTCCC +
Preference number: 1 (lower is better)
Translates to: HFISRCTEQKMKVNQ*SLIGSFLWTGLTLP
Trigger: GGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGGTTTACTTTCATTTTCTGTTCGGTACATCTGGAAATGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp CTTCAGCAGAAGCCTAGCATATCATTCTCCTTATACAAAGATCATTaGCCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCAT +
Preference number: 1 (lower is better)
Translates to: LQQKPSISFSLYKDH*PQDTSGWIVQLFCH
Trigger: ATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTATAAGGAGAATGATATGCTAGGCTTCTGCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR CCA 90 bp TTCCTTAGCAAGTATATATCAACGTTAAATGAAATACTCTGTCCCTaGTTCTATATTCCACTCTATTCAGCACAATGGCTGAACCTGGGG +
Preference number: 1 (lower is better)
Translates to: FLSKYISTLNEILCP*FYIPLYSAQWLNLG
Trigger: CCCCAGGTTCAGCCATTGTGCTGAATAGAGTGGAATATAGAACCAGGGACAGAGTATTTCATTTAACGTTGATATATACTTGCTAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 90 bp AAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATTaGAATCTACTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTT +
Preference number: 1 (lower is better)
Translates to: KILLVGLSNSFAIDY*NLLKHSPAEAHPSV
Trigger: AACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAGTAGATTTCAATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR GCA 90 bp TCCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATaGAACAGCTGGAGTTACCTACAAATATACAAACTTGTATCTATC +
Preference number: 1 (lower is better)
Translates to: SPLFLSASYEDSQYK*NSWSYLQIYKLVSI
Trigger: GATAGATACAAGTTTGTATATTTGTAGGTAACTCCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR GCA 90 bp AACATCACTGGCTCACAAAAACAGTCACCTTGTTACCTTCTCAGTTaGATTTGTTTATTTCACAAGGCTTCATTCACACATAAAAACAAG +
Preference number: 1 (lower is better)
Translates to: NITGSQKQSPCYLLS*ICLFHKASFTHKNK
Trigger: CTTGTTTTTATGTGTGAATGAAGCCTTGTGAAATAAACAAATGCAACTGAGAAGGTAACAAGGTGACTGTTTTTGTGAGCCAGTGATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CCA 90 bp TTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTaGAGTTACCTACAAATATACAAACTTGTATCTATCCATTGGGTC +
Preference number: 1 (lower is better)
Translates to: FLSASYEDSQYKCNS*SYLQIYKLVSIHWV
Trigger: GACCCAATGGATAGATACAAGTTTGTATATTTGTAGGTAACTCCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGGCCTGCCTGCCTTCCTaGACTCCAGTACTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLACLPS*TPVLGA
Trigger: TGCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGC...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR GCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGTCAAGGAGGCCTGCCTaGCTTCCTGGACTCCAGTAC +
Preference number: 2 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLSRRPA*LPGLQY
Trigger: GTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGA...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR TCA 90 bp GCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGAAGTGTCAGCAAGGCTaGGGGAGGGGCATCCGCCAT +
Preference number: 2 (lower is better)
Translates to: AHLGSARGWGIPFPSQGKKCQQG*GRGIRH
Trigger: ATGGCGGATGCCCCTCCCTCAGCCTTGCTGACACTT...CTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CAA 90 bp ATTTCTGCATTTCCAACAGAGGTACCGGGTTCATCTCACTGGGGCTaGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGGCATTGC +
Preference number: 2 (lower is better)
Translates to: ISAFPTEVPGSSHWG*SHSGCSPRSSVGHC
Trigger: GCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGAACCCGGTACCTCTGTTGGAAATGCAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR GCA 90 bp AAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGAAGCTCAAGGAGGCCTaGCTGCCTTCCTGGACTCCA +
Preference number: 2 (lower is better)
Translates to: KKEQLQSTAPSVSDAEDRKLKEA*LPSWTP
Trigger: TGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTT...CCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR CCA 90 bp AAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGCCGGGTTCATCTCACTaGGGCTTGTCACACAGTGGG +
Preference number: 2 (lower is better)
Translates to: KKEQLQSTAPSVSDAEDRPGSSH*GLSHSG
Trigger: CCCACTGTGTGACAAGCCCCAGTGAGATGAACCCGG...CCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR GCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGGGCAGCAGAAACTTCTaGAGACTTAAATGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLGSRNF*RLKCPC
Trigger: ACAGGGACATTTAAGTCTGCAGAAGTTTCTGCTGCC...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR CCA 90 bp CAAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGGAAGTGCAAGGGGTTaGGGAATTCCCTTTCCTAGC +
Preference number: 2 (lower is better)
Translates to: QKGTAPVYSSQRERRRRQGSARG*GIPFPS
Trigger: GCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCC...CTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR TCA 90 bp GCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGGCCATTGCTGAAGCTTaGGTAGGTAAACAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: AHLGSARGWGIPFPSQGKAIAEA*VGKQSS
Trigger: GCTGCTTTGTTTACCTACTCAAGCTTCAGCAATGGC...CTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR TCA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCGCTGTTGAGCTCCAGTaGTTCGGAAATCACACAGGT +
Preference number: 2 (lower is better)
Translates to: TLLWDLPILVSQVFKRAIAVELQ*FGNHTG
Trigger: ACCTGTGTGATTTCCGAATCACTGGAGCTCAACAGC...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR GCA 90 bp GGCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAACCTCATACAGCCAGGTaGCCTTCTGAGATGAAGCTT +
Preference number: 2 (lower is better)
Translates to: GIAHLGSARGWGIPFPSQPHTAR*PSEMKL
Trigger: AAGCTTCATCTCAGAAGGGCACCTGGCTGTATGAGG...TTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CAA 90 bp CCCTGGTCCTCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAGTGTTTGCATGCCATCATCTTACCC +
Preference number: 2 (lower is better)
Translates to: PWSSLPVAASFKAPS*LKMSLQCLHAIILP
Trigger: GGGTAAGATGATGGCATGCAAACACTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTaGTGCTTGGGTAAGGCTGGAACTATGTGCTCTCCTTGGGTGGCT +
Preference number: 2 (lower is better)
Translates to: QEESSQISIGLNIVL*CLGKAGTMCSPWVA
Trigger: AGCCACCCAAGGAGAGCACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR TCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGGGAAAAGATCCACTGTaGGCAACTTGGTGCATCCTC +
Preference number: 2 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLGKDPL*ATWCIL
Trigger: GAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCC...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR GCA 90 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTGAAAATGTCACTGCTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 2 (lower is better)
Translates to: SLPVAASFKAPSLLKMSLLVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...CAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 90 bp CCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAACTATGTGC +
Preference number: 2 (lower is better)
Translates to: PSKGHQEESSQISIG*NIVLLCLGKAGTMC
Trigger: GCACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR TCA 90 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTGAAAATGTCACTGAGACAGAGGCAAGTTTaGAACATCCTTGTGTCAGTC +
Preference number: 2 (lower is better)
Translates to: SLPVAASFKAPSLLKMSLRQRQV*NILVSV
Trigger: GACTGACACAAGGATGTTTCAAACTTGCCTCTGTCT...CAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 90 bp TGCAATGGCTGGGTGCCCGTGGCCGTTTTGATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCATTCATAAGG +
Preference number: 2 (lower is better)
Translates to: CNGWVPVAVLIEFRV*LNQEFFAAWISFIR
Trigger: CCTTATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR TCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACACATCGTGCAGCTGGCTaGAAACATGGGCGTCATAGG +
Preference number: 2 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTHRAAG*KHGRHR
Trigger: CCTATGACGCCCATGTTTTCAGCCAGCTGCACGATG...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR GCA 90 bp CTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACGGGAAGGCTAATAAATTCCGATGCCACGGGTaGCAACATTCGGGCAGACAC +
Preference number: 2 (lower is better)
Translates to: LSNTDCKSQLTSDGKANKFRCHG*QHSGRH
Trigger: GTGTCTGCCCGAATGTTGGCACCCGTGGCATCGGAA...TTTATTAGCCTTCCCGTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
3UTR-3UTR GCA 90 bp TGGGTCTTCCTGTTGCAGCTGACTCTCTCGCATTGTCTGATATTCTTTCTCATAAGGAAGTCTTCATCGTaGAGCTGGCTGAAAACATGG +
Preference number: 2 (lower is better)
Translates to: WVFLLQLTLSHCLIFFLIRKSSS*SWLKTW
Trigger: CCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCT...TATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATGAGAGTGGTCATGCCTaGCCCCACAGTGTGCTTTAT +
Preference number: 2 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDESGHA*PHSVLY
Trigger: ATAAAGCACACTGTGGGGCCAGGCATGACCACTCTC...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 90 bp AATTACATAGGCAGCAACAGGAAGAGTGAGTATTACAACTCAGGTTaGAACCGAGGTTCCAAGATGGCCAAAAAGGAACAGCTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: NYIGSNRKSEYYNSG*NRGSKMAKKEQLQS
Trigger: AGACTGGAGCTGTTCCTTTTTGGCCATCTTGGAACCTCGGTTCAAACCTGAGTTGTAATACTCACTCTTCCTGTTGCTGCCTATGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CAA 90 bp CCTTGTCTTCTGCCTGATCCAAGTCATTCCGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAAGGTCATCATTCTCTTGTTCCAACC +
Preference number: 2 (lower is better)
Translates to: PCLLPDPSHSVEQFC*LLVHGQGHHSLVPT
Trigger: GGTTGGAACAAGAGAATGATGACCTTGCCCATGAACTAGTAACAAGCAAAATTGCTCTACGGAATGACTTGGATCAGGCAGAAGACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR TCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTTCATTTCCTTGCTGTTaGGCTCCAGTGATTCGGAAA +
Preference number: 2 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSSFPCC*APVIRK
Trigger: TTTCCGAATCACTGGAGCTCAACAGCAAGGAAATGA...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR GCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTAAGCTAGCAAACATATaGACTGCAAAATCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAKLANI*TAKSSL
Trigger: CAAGCTGGATTTTGCAGTGCATATGTTTGCTAGCTT...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR GCA 90 bp CTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACGGGAAGGCTAATAAATGGACAATGTTCCGATaGCACGGGTGCCAACATTCG +
Preference number: 2 (lower is better)
Translates to: LSNTDCKSQLTSDGKANKWTMFR*HGCQHS
Trigger: CGAATGTTGGCACCCGTGGCATCGGAACATTGTCCA...TTTATTAGCCTTCCCGTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
3UTR-3UTR GCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGTTTCTTCCATCATCTTaGCAGCTGGCCTTTCCACAG +
Preference number: 2 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWFLPSS*QLAFPQ
Trigger: CTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAA...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTTTATCACTTCAACCTTaGAATAACAGATGTCTCCAT +
Preference number: 2 (lower is better)
Translates to: DRINTSLGIRLRRKPESGLSLQP*NNRCLH
Trigger: ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAA...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGATTGGTTCTTTCCTTTaGACAGGATTAACACTTCCC +
Preference number: 2 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLIGSFL*TGLTLP
Trigger: GGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAAT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCCTGCACAAGGCTTCTTaGAATCAAAGCGTAAAGTAC +
Preference number: 2 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGLHKAS*NQSVKY
Trigger: GTACTTTACGCTTTGATTCCAAGAAGCCTTGTGCAG...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CCA 90 bp ATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAACTATGCTTCAGCTTCTTGGTTaGTACCATAGACCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: ISIGLNIVLLCLGKAGTMLQLLG*YHRPGL
Trigger: AAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAG...CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR TCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGAAGTCTTTGTGGATATaGCATGCACAGCTAAAACAG +
Preference number: 2 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLKSLWI*HAQLKQ
Trigger: CTGTTTTAGCTGTGCATGTCATATCCACAAAGACTT...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
3UTR-3UTR TCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATGTAGTTTGGTTGGTTTaGAAGGATCAGAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDVVWLV*KDQRPP
Trigger: TGGAGGCCTCTGATCCTTTCAAACCAACCAAACTAC...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR TCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATTGTGATTCTCCTGGGTaGCTGGCTCACTCCTTTAAA +
Preference number: 2 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDCDSPG*LAHSFK
Trigger: TTTAAAGGAGTGAGCCAGTCACCCAGGAGAATCACA...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTAAGGAGTCAGTATTTTaGAGTGTTTTTAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAKESVF*SVFKGK
Trigger: CTTGCCCTTAAAAACACTCCAAAATACTGACTCCTT...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CCA 90 bp AGAGTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCATTCATTCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: RVQGFAKPRVFRSLDFIHSVSIP*SSLPVA
Trigger: AGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGA...ATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATGTCCTAACCCTTCTGTaGGACCTCCCAATCCTTGTG +
Preference number: 2 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYVLTLL*DLPILV
Trigger: CACAAGGATTGGGAGGTCCCACAGAAGGGTTAGGAC...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR CAA 90 bp ACAGAAAATGAAAGTAAACCAATGATCGCTGATTGGTTCTTTCCTTaGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: TENESKPMIADWFFP*DRINTSLGIRLRRK
Trigger: TTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGGTTTACTTTCATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR TCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGACAGAGGCAAGTTTaGAACATCCTTGTGTCAGTC +
Preference number: 2 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNRQRQV*NILVSV
Trigger: GACTGACACAAGGATGTTTCAAACTTGCCTCTGTCT...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
3UTR-3UTR TCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATAGCATTAAACTAAGATaGTGTGAGCCTGACCTCTAT +
Preference number: 2 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYSIKLR*CEPDLY
Trigger: ATAGAGGTCAGGCTCACATCATCTTAGTTTAATGCT...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR TCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATCCCTTCTACCATTGTTaGTGCCTGCAGTTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYPFYHC*CLQFEG
Trigger: TCCCTCAAACTGCAGGCATCAACAATGGTAGAAGGG...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR CCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCACCAATGATCGCTGATTaGTTCTTTCCTTTGGACAGG +
Preference number: 2 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKAPMIAD*FFPLDR
Trigger: CCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGG...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
3UTR-3UTR CCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATCTCTATTCAGCACAATaGCTGAACCTGGGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNLYSAQ*LNLGLF
Trigger: AAAAAGCCCCAGGTTCAGCCATTGTGCTGAATAGAG...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 90 bp TTTGATAGAGTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTaGGATTTCATTCATAAGGGCTCCTCTCTGATGTTCAAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: FDRVQGFAKPRVFRS*DFIHKGSSLMFKFL
Trigger: CAGGAACTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTATCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR TCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 90 bp CAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATaGAAATCTACTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: QDTSGWIVQLFCHRL*KSTKAQSCRSTSKC
Trigger: ACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAGTAGATTTCAATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR GCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATGGGTTAAATGATGGCTaGCAACATGAAATGCCAGGA +
Preference number: 2 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYGLNDG*QHEMPG
Trigger: TCCTGGCATTTCATGTTGGCAGCCATCATTTAACCC...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR CCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCACTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKALPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
3UTR-3UTR CCA 90 bp GATGTTACCATTTACTTCCCCGAACATCATGATGCTATGATTACAATCTATGTTGTTCCAGAAAACCCATaGACAATGTTCCGATGCCAC +
Preference number: 2 (lower is better)
Translates to: DVTIYFPEHHDAMITIYVVPENP*TMFRCH
Trigger: GTGGCATCGGAACATTGTCCATGGGTTTTCTGGAAC...AACATAGATTGTAATCATAGCATCATGATGTTCGGGGAAGTAAATGGTAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474375.6
3UTR CAA 90 bp CATTACAACTCAAGATCAGCATCTCCTATTGAGGTGCAGCCAAGGTaGAAGTCCTCATTTTGGTCACTTTTGAAAGATAAAGAATTTGCT +
Preference number: 2 (lower is better)
Translates to: HYNSRSASPIEVQPR*KSSFWSLLKDKEFA
Trigger: AGCAAATTCTTTATCTTTCAAAAGTGACCAAAATGAGGACTTCAACCTTGGCTGCACCTCAATAGGAGATGCTGATCTTGAGTTGTAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR TCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR GCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATCCATGCTGCTACTCCTaGTTCAGAAATCTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYPCCYS*FRNLPL
Trigger: TAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCATGG...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR CCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCAGAAATACTCTGTCCCTaGTTCTATATTCCACTCTAT +
Preference number: 2 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKAEILCP*FYIPLY
Trigger: ATAGAGTGGAATATAGAACCAGGGACAGAGTATTTC...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
3UTR CAA 90 bp ATGAAATTCACAACACAAAAGAGCATCTTTAATTTAGCTGGCCATTaGATAAGGCAACTGCACAAGGCTTCTTGGAATCAAAGCGTAAAG +
Preference number: 2 (lower is better)
Translates to: MKFTTQKSIFNLAGH*IRQLHKASWNQSVK
Trigger: CTTTACGCTTTGATTCCAAGAAGCCTTGTGCAGTTGCCTTATCAAATGGCCAGCTAAATTAAAGATGCTCTTTTGTGTTGTGAATTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
3UTR CAA 90 bp ACCTTTAACTTTATAATTGCCAGAAGTCACATCTGTGTCCATACTTaGGTGTACTTAGGAACTCACAAGTCCTATGTGGCATTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: TFNFIIARSHICVHT*VYLGTHKSYVAFLK
Trigger: TTTTAAGAATGCCACATAGGACTTGTGAGTTCCTAAGTACACCAAAGTATGGACACAGATGTGACTTCTGGCAATTATAAAGTTAAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 90 bp TACCTACAAATATACAAACTTGTATCTATCCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCATTGTCTGATATTCTTTCTCATATTT +
Preference number: 2 (lower is better)
Translates to: YLQIYKLVSIHWVFL*QLTLSHCLIFFLIF
Trigger: AAATATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGTTTGTATATTTGTAGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR GCA 72 bp CTGGGTGGAGCCCACCAAAGCTCAAGGAGGCCTGCCTaGCTTCCTGGACTCCAGTACTGGGGGCAGGGCATA +
Preference number: 3 (lower is better)
Translates to: LGGAHQSSRRPA*LPGLQYWGQGI
Trigger: TATGCCCTGCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCTCCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CCA 72 bp GCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTaGGGCATTGCTCACCTGGGAAGTGCAAGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: ACHTVGAAQGAA*GIAHLGSARGW
Trigger: CCAACCCCTTGCACTTCCCAGGTGAGCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CCA 72 bp GGTACCGGGTTCATCTCACTGGGGCTTGTCACACAGTaGGTGCAGCCCAAGGAGCAGCGTGGGGCATTGCTC +
Preference number: 3 (lower is better)
Translates to: GTGFISLGLVTQ*VQPKEQRGALL
Trigger: GAGCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGAACCCGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CCA 72 bp CTCCTTGGGTGGCTGGGTGACCGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGTTTTGATAGAGTTCAG +
Preference number: 3 (lower is better)
Translates to: LLGWLGDRCWLQ*LGARGRFDRVQ
Trigger: CTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 72 bp TTGGGTGGCTGGGTGACCGGTGCTGGCTGCAATGGCTaGGTGCCCGTGGCCGTTTTGATAGAGTTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: LGGWVTGAGCNG*VPVAVLIEFRV
Trigger: AACCCTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 72 bp TCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTaGGGGCAGGGCATAGTTGAACAAACGGCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SRRPACLPGLQY*GQGIVEQTAAE
Trigger: TTCTGCTGCCGTTTGTTCAACTATGCCCTGCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR-3UTR CAA 90 bp TTCATCTCACTGGGGCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGCCCTGTCTGACAGCTTaGAAGAGAGTAGTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: FISLGLVTQWVQPKEQRGPCLTA*KRVVVL
Trigger: GAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGG...CCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CCA 72 bp TCTGCATTTCCAACAGAGGTACCGGGTTCATCTCACTaGGGCTTGTCACACAGTGGGTGCAGCCCAAGGAGC +
Preference number: 3 (lower is better)
Translates to: SAFPTEVPGSSH*GLSHSGCSPRS
Trigger: GCTCCTTGGGCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGAACCCGGTACCTCTGTTGGAAATGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR TCA 72 bp TCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGTaGTTTCTGCATTTCCAACAGAGGTACCGGGTTCAT +
Preference number: 3 (lower is better)
Translates to: STAPSVSDAEDR*FLHFQQRYRVH
Trigger: ATGAACCCGGTACCTCTGTTGGAAATGCAGAAATCACCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR TCA 72 bp CCAAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACAGGTGATTTCTGCATTTCC +
Preference number: 3 (lower is better)
Translates to: PKRNSSSLQLPA*ATQKTGDFCIS
Trigger: GGAAATGCAGAAATCACCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR GCA 72 bp CCTTCTCATCATCTGTTTCAATTCCCTGGTCCTCTCTaGCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: PSHHLFQFPGPL*LWLLVSKHPPC
Trigger: GCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGATGATGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 72 bp TGTGTCACAGGTGTTCAAGAGGGCCATCACCCTCACTaGGATTCCCTTCTACCATTGTTGATGCCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: CVTGVQEGHHPH*DSLLPLLMPAV
Trigger: AACTGCAGGCATCAACAATGGTAGAAGGGAATCCCAGTGAGGGTGATGGCCCTCTTGAACACCTGTGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR CAA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTTGTTTTCTGGCCTCCTaGACTTTCCTTCAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: DRINTSLGIRLRRKPESGCFLAS*TFLQRD
Trigger: GTCCCTTTGAAGGAAAGTCAAGGAGGCCAGAAAACA...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTCCACTGTGAGCAACTaGGTGCATCCTCCTGGGATG +
Preference number: 3 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGSTVSN*VHPPGM
Trigger: CATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGA...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp CCTGGTTCTATATTCCACTCTATTCAGCACAATGGCTaGACCTGGGGCTTTTTAGGCGTCTCTGGTAAAGGC +
Preference number: 3 (lower is better)
Translates to: PGSIFHSIQHNG*TWGFLGVSGKG
Trigger: GCCTTTACCAGAGACGCCTAAAAAGCCCCAGGTTCAGCCATTGTGCTGAATAGAGTGGAATATAGAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATCTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 3 (lower is better)
Translates to: RINTSLGIRLRRKPESGHLKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTCTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 3 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCALKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGTCAAAGCTCATTTCCTaGCTGTTGAGCTCCAGTGAT +
Preference number: 3 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWSKLIS*LLSSSD
Trigger: ATCACTGGAGCTCAACAGCAAGGAAATGAGCTTTGA...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR TCA 72 bp GACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: DTRKNPPRFPLV*TLCSCAWVRLE
Trigger: TTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
3UTR TCA 72 bp GCAGCAACAGGAAGAGTGAGTATTACAACTCAGGTTTaGACCGAGGTTCCAAGATGGCCAAAAAGGAACAGC +
Preference number: 3 (lower is better)
Translates to: AATGRVSITTQV*TEVPRWPKRNS
Trigger: GCTGTTCCTTTTTGGCCATCTTGGAACCTCGGTTCAAACCTGAGTTGTAATACTCACTCTTCCTGTTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR GCA 72 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTaGTTGGGTAAGGCTGGAACTATGTGCTCTCCTTGG +
Preference number: 3 (lower is better)
Translates to: SQISIGLNIVLL*LGKAGTMCSPW
Trigger: CCAAGGAGAGCACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CCA 72 bp CTCAAAGGCATTGCAGTGAAGGAGAGTTTAGGCTTATaGTACCAACAGGCATACCCAAGTATGATATGGGGC +
Preference number: 3 (lower is better)
Translates to: LKGIAVKESLGL*YQQAYPSMIWG
Trigger: GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATGCCTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGCAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGC +
Preference number: 3 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLQISIG*NIVLLC
Trigger: GCACAAGAGCACAATGTTCAAACCAATGGAAATCTG...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGATCTGTGTCCATACTTaGGTGTACTTAGGAACTCAC +
Preference number: 3 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLICVHT*VYLGTH
Trigger: GTGAGTTCCTAAGTACACCAAAGTATGGACACAGAT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGATGGACTTATCAAACTaGAGAGGTATGTACCTGGTG +
Preference number: 3 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLMDLSN*RGMYLV
Trigger: CACCAGGTACATACCTCTCAAGTTTGATAAGTCCAT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp AATTTAACAGCTGGGAGAGGGGCAGAAGACACTGGTTaGATGGCATTCCTATTAGTGTTCCTGATAGGCACT +
Preference number: 3 (lower is better)
Translates to: NLTAGRGAEDTG*MAFLLVFLIGT
Trigger: AGTGCCTATCAGGAACACTAATAGGAATGCCATTCAACCAGTGTCTTCTGCCCCTCTCCCAGCTGTTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp GTCTTCAAAGCTCATTTCCTTGCTGTTGAGCTCCAGTaGTTCGGAAATCACACAGGTGGGTTAAATGATGGC +
Preference number: 3 (lower is better)
Translates to: VFKAHFLAVELQ*FGNHTGGLNDG
Trigger: GCCATCATTTAACCCACCTGTGTGATTTCCGAATCACTGGAGCTCAACAGCAAGGAAATGAGCTTTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR CCA 72 bp GTAGGAAACAGGCTGCAGAGCTGTGGTCTGGCCTTCTaGCTTTCATCATCATTTCTTGAAATCTCAATGTGT +
Preference number: 3 (lower is better)
Translates to: VGNRLQSCGLAF*LSSSFLEISMC
Trigger: ACACATTGAGATTTCAAGAAATGATGATGAAAGCCAGAAGGCCAGACCACAGCTCTGCAGCCTGTTTCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAATTTCTTCCATCATCTaGCCAGCTGGCCTTTCCACA +
Preference number: 3 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTISSII*PAGLST
Trigger: TGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAAT...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CAA 90 bp GCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAGATCTGTTTATACTCAGCAAGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 3 (lower is better)
Translates to: AVSPAWYSTANRSVYTQQADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...TTGCTGAGTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR TCA 72 bp GCCATCACCCTCACTGGGATTCCCTTCTACCATTGTTaGTGCCTGCAGTTTGAGGGATTTTATAGTGAAATA +
Preference number: 3 (lower is better)
Translates to: AITLTGIPFYHC*CLQFEGFYSEI
Trigger: TATTTCACTATAAAATCCCTCAAACTGCAGGCATCAACAATGGTAGAAGGGAATCCCAGTGAGGGTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR CCA 72 bp GAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTaGGATGTAGATGGCTCTTATTTGATTCTTCTAAGG +
Preference number: 3 (lower is better)
Translates to: EKIHCEQLGASS*DVDGSYLILLR
Trigger: CCTTAGAAGAATCAAATAAGAGCCATCTACATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTGTTGATGCCTGCAGTTaGAGGGATTTTATAGTGAAA +
Preference number: 3 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPVDACS*RDFIVK
Trigger: TTTCACTATAAAATCCCTCAAACTGCAGGCATCAAC...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR TCA 72 bp AACCCCTACATCAGTTACACATGTGATTCTCCTGGGTaGCTGGCTCACTCCTTTAAAGATGTAACTCTATCT +
Preference number: 3 (lower is better)
Translates to: NPYISYTCDSPG*LAHSFKDVTLS
Trigger: AGATAGAGTTACATCTTTAAAGGAGTGAGCCAGTCACCCAGGAGAATCACATGTGTAACTGATGTAGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp CTTTTCTCATTACAACTCAAGATCAGCATCTCCTATTaGGGTGCAGCCAAGGTTGAAGTCCTCATTTTGGTC +
Preference number: 3 (lower is better)
Translates to: LFSLQLKISISY*GAAKVEVLILV
Trigger: GACCAAAATGAGGACTTCAACCTTGGCTGCACCTCAATAGGAGATGCTGATCTTGAGTTGTAATGAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp TCTGGGACCATCTCCAGCCTTATTCTTGTGCTTTCATaGCACCAGAGTCTTTCGATGCATTTATATTCTCAC +
Preference number: 3 (lower is better)
Translates to: SGTISSLILVLS*HQSLSMHLYSH
Trigger: GTGAGAATATAAATGCATCGAAAGACTCTGGTGTCATGAAAGCACAAGAATAAGGCTGGAGATGGTCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR GCA 72 bp CTTCTGCCTGATCCAAGTCATTCCGTAGAGCAATTTTaGTTGTTACTAGTTCATGGGCAAGGTCATCATTCT +
Preference number: 3 (lower is better)
Translates to: LLPDPSHSVEQF*LLLVHGQGHHS
Trigger: AGAATGATGACCTTGCCCATGAACTAGTAACAAGCAAAATTGCTCTACGGAATGACTTGGATCAGGCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CAA 90 bp AGAGTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCATTCATTGTTTTCTGGCCTCCTaGACTTTCCTTCAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: RVQGFAKPRVFRSLDFIHCFLAS*TFLQRD
Trigger: GTCCCTTTGAAGGAAAGTCAAGGAGGCCAGAAAACA...ATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CAA 90 bp AGAGTTTTTCGCAGCTTGGATTTCATTCATAAGGGCTCCTCTCTGATGTTCAAGTATTTCTTCAGCTTCTaGGTTGGTACCATAGACCTG +
Preference number: 3 (lower is better)
Translates to: RVFRSLDFIHKGSSLMFKYFFSF*VGTIDL
Trigger: CAGGTCTATGGTACCAACCAAGAAGCTGAAGAAATA...CTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR TCA 72 bp AGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTaGATAAATCCTGAAAACTTAAGATGTTTAGGTTTC +
Preference number: 3 (lower is better)
Translates to: RVVMPGPTVCFI*INPENLRCLGF
Trigger: GAAACCTAAACATCTTAAGTTTTCAGGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp AGAGGAAGAATGTGTTGGGACAGTTCTAGTTCAGTGTaGCTATCAGCATGGCGACGAGAAAGAGTTTTATAT +
Preference number: 3 (lower is better)
Translates to: RGRMCWDSSSSV*LSAWRRERVLY
Trigger: ATATAAAACTCTTTCTCGTCGCCATGCTGATAGTCACACTGAACTAGAACTGTCCCAACACATTCTTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CCA 72 bp GACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTaGAACAGTTCACCTGCTAAAAGTCTTTGTGGATAT +
Preference number: 3 (lower is better)
Translates to: DRGKFETSLCQS*NSSPAKSLCGY
Trigger: ATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
3UTR-3UTR CAA 90 bp ATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAACTATGAAGTTTGAAACATCCTaGTGTCAGTCTTGGAACAGT +
Preference number: 3 (lower is better)
Translates to: ISIGLNIVLLCLGKAGTMKFETS*CQSWNS
Trigger: ACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT...CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CAA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGAAGTTTGAAACATCCTaGTGTCAGTCTTGGAACAGT +
Preference number: 3 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWKFETS*CQSWNS
Trigger: ACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
3UTR-3UTR CAA 90 bp AGAGTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCATTCATCAGACAGAGGCAAGTTaGAAACATCCTTGTGTCAGT +
Preference number: 3 (lower is better)
Translates to: RVQGFAKPRVFRSLDFIHQTEAS*KHPCVS
Trigger: ACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG...ATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTGTTTTCTGGCCTCCTaGACTTTCCTTCAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVCFLAS*TFLQRD
Trigger: GTCCCTTTGAAGGAAAGTCAAGGAGGCCAGAAAACA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 3 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATGATTGGTTCTTTCCTTaGGACAGGATTAACACTTCC +
Preference number: 3 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNDWFFP*DRINTS
Trigger: GGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATC...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATACTGCACAAGGCTTCTaGGAATCAAAGCGTAAAGTA +
Preference number: 3 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDTAQGF*ESKRKV
Trigger: TACTTTACGCTTTGATTCCAAGAAGCCTTGTGCAGT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATAATTTAGCTGGCCATTaGATAAGGCAACTGCACAAG +
Preference number: 3 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDNLAGH*IRQLHK
Trigger: CTTGTGCAGTTGCCTTATCAAATGGCCAGCTAAATT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp AGAGTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCATTCATACTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: RVQGFAKPRVFRSLDFIHTCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGT...ATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR-3UTR CAA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATCTCATTTCCTTGCTGTaGAGCTCCAGTGATTCGGAA +
Preference number: 3 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYLISLL*SSSDSE
Trigger: TTCCGAATCACTGGAGCTCAACAGCAAGGAAATGAG...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGC +
Preference number: 3 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHQISIG*NIVLLC
Trigger: GCACAAGAGCACAATGTTCAAACCAATGGAAATCTG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
3UTR-3UTR CAA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAGTAGATGGCTCTTATTaGATTCTTCTAAGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGVDGSY*ILLRVC
Trigger: ACACACCCTTAGAAGAATCAAATAAGAGCCATCTAC...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp CTTTTCTACTTTACTCAGGACATTTCAGAAAGCCAATaGAGAAGTACTAATTTAACAGCTGGGAGAGGGGCA +
Preference number: 3 (lower is better)
Translates to: LFYFTQDISESQ*RSTNLTAGRGA
Trigger: TGCCCCTCTCCCAGCTGTTAAATTAGTACTTCTTCATTGGCTTTCTGAAATGTCCTGAGTAAAGTAGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR TCA 72 bp CTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATTaGAATCTACTAAAGCACAGTCCTGCAGAAGCACAT +
Preference number: 3 (lower is better)
Translates to: LVGLSNSFAIDY*NLLKHSPAEAH
Trigger: ATGTGCTTCTGCAGGACTGTGCTTTAGTAGATTTCAATAATCTATGGCAAAAGAGTTGGACAATCCAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR TCA 72 bp AAGCCTAGCATATCATTCTCCTTATACAAAGATCATTaGCCTCAAGATACTTCTGGTTGGATTGTCCAACTC +
Preference number: 3 (lower is better)
Translates to: KPSISFSLYKDH*PQDTSGWIVQL
Trigger: GAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTATAAGGAGAATGATATGCTAGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR CAA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGAGTTATGGAAACTTCTaGCAGCAATTCAGTATCCTT +
Preference number: 3 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLSYGNF*QQFSIL
Trigger: AAGGATACTGAATTGCTGCAAGAAGTTTCCATAACT...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR-3UTR CAA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACTCTGTAGCACAAATGTaGCTAGTTTTCTTAACTGAC +
Preference number: 3 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDSVAQM*LVFLTD
Trigger: GTCAGTTAAGAAAACTAGCAACATTTGTGCTACAGA...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
3UTR CCA 72 bp AAGTATATATCAACGTTAAATGAAATACTCTGTCCCTaGTTCTATATTCCACTCTATTCAGCACAATGGCTG +
Preference number: 3 (lower is better)
Translates to: KYISTLNEILCP*FYIPLYSAQWL
Trigger: CAGCCATTGTGCTGAATAGAGTGGAATATAGAACCAGGGACAGAGTATTTCATTTAACGTTGATATATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CCA 72 bp GCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTaGAGTTACCTACAAATATACAAACTTGTATCTATC +
Preference number: 3 (lower is better)
Translates to: ASYEDSQYKCNS*SYLQIYKLVSI
Trigger: GATAGATACAAGTTTGTATATTTGTAGGTAACTCCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp CCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGGCGCCTGCCTGCCTTCCTaGACTCCAGTACTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PTKAQGGLPAFLDSSTGGACLPS*TPVLGA
Trigger: TGCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGC...GCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp ACTGGGTGGAGCCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAAAGTGTCAGCAAGGCTaGGGGAGGGGCATCCGCCAT +
Preference number: 4 (lower is better)
Translates to: TGWSPPKLKEACLPSWTPKCQQG*GRGIRH
Trigger: ATGGCGGATGCCCCTCCCTCAGCCTTGCTGACACTT...TGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCTCCACCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp CCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGGCTCAAGGAGGCCTGCCTaGCTTCCTGGACTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PTKAQGGLPAFLDSSTGGSRRPA*LPGLQY
Trigger: GTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGA...GCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp ACTGGGTGGAGCCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCACCGGGAAGACTGAACTaGGTGGAGCCCACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TGWSPPKLKEACLPSWTPPGRLN*VEPTKA
Trigger: AGCTTTGGTGGGCTCCACCCAGTTCAGTCTTCCCGG...TGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCTCCACCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp TTCATCTCACTGGGGCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGTTGTCACACAGTGGGTaGAGCCCAAGGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: FISLGLVTQWVQPKEQRGLSHSG*SPRSSV
Trigger: CACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAA...CCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp GCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGGCATTGCTCACCTGCTATCCAGCATTGCCTaGTTGTCATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ACHTVGAAQGAAWGIAHLLSSIA*LSWQPA
Trigger: GGCAGGCTGCCATGACAACCAGGCAATGCTGGATAG...CAGGTGAGCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGCCGGGTTCATCTCACTaGGGCTTGTCACACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLPGSSH*GLSHSG
Trigger: CCCACTGTGTGACAAGCCCCAGTGAGATGAACCCGG...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGTTCATCATCCTGGGGTaGCATTGGACCCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLFIILG*HWTPST
Trigger: AGTGGAGGGGGTCCAATGTCACCCCAGGATGATGAA...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp GCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGGCATTGCTCACCTGGGTGCCCTTCTGAGATaGAGCTTCCAGAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: ACHTVGAAQGAAWGIAHLGALLR*SFQRKD
Trigger: ATCCTTCCTCTGGAAGCTTCATCTCAGAAGGGCACC...CAGGTGAGCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp CTCCTCCTTGCTGGCTGCTTGCTGTTTCTCCAGCCTGGTACTCAACTGCGAACATGGCTGGGTGACCGGTaGTGGCTGCAATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLLAGCLLFLQPGTQLRTWLGDR*WLQWLG
Trigger: ACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCA...TGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp CCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGGCCCTCATACAGCCAGGTaGCCTTCTGAGATGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PTKAQGGLPAFLDSSTGGPHTAR*PSEMKL
Trigger: AAGCTTCATCTCAGAAGGGCACCTGGCTGTATGAGG...GCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp GCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGGCATTGCTCACCTGTCTGCTTCATCATCCTaGGGTGACATTGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: ACHTVGAAQGAAWGIAHLSASSS*GDIGPP
Trigger: AGGGGGTCCAATGTCACCCCAGGATGATGAAGCAGA...CAGGTGAGCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGRCWLQ*LGARGR
Trigger: ACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCG...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCTCTCCTTGGGTGGCTaGGTGACCGGTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGLSLGG*VTGAGC
Trigger: GCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAG...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGGCTTGTCACACAGTaGGTGCAGCCCAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALLTWEVQGVGEFPFLAKGLVTQ*VQPKEQ
Trigger: CTGCTCCTTGGGCTGCACCCACTGTGTGACAAGCCC...CTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CAA 72 bp TTTCCAACAGAGGTACCGGGTTCATCTCACTGGGGCTaGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: FPTEVPGSSHWG*SHSGCSPRSSV
Trigger: CACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGAACCCGGTACCTCTGTTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp GCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGGCTCCACCACCTCTGTaGCTACCATATCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: AHLGSARGWGIPFPSQGKAPPPL*LPYPLP
Trigger: TGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGC...CTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTGAAAATGTCACTGCCTTGGGTGGCTGGGTaGCCGGTGCTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: SLPVAASFKAPSLLKMSLPWVAG*PVLAAM
Trigger: CATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGG...CAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp GCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGGCATTGCTCACCTGAGCCAAGGGAAGCCATaGCAGATAGTACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ACHTVGAAQGAAWGIAHLSQGKP*QIVPGK
Trigger: TTTTCCAGGTACTATCTGTCATGGCTTCCCTTGGCT...CAGGTGAGCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp GCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGCAGCCCTTTCGGTCGTaGACCAAGGTTACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AHLGSARGWGIPFPSQGKQPFRS*TKVTVP
Trigger: TGGCACAGTAACCTTGGTGCACGACCGAAAGGGCTG...CTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp CAAGCCGCAAGTGTCAGCAAGGCTGAGGGAGGGGCATCCGCCATTGCTGAAGCTCAGCCTGCCAATAACTaGCATACCTCTGCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: QAASVSKAEGGASAIAEAQPANN*HTSALN
Trigger: ATTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTG...AGCTTCAGCAATGGCGGATGCCCCTCCCTCAGCCTTGCTGACACTTGCGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp CCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGGCGGCAGCAGAAACTTCTaGAGACTTAAATGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PTKAQGGLPAFLDSSTGGGSRNF*RLKCPC
Trigger: ACAGGGACATTTAAGTCTGCAGAAGTTTCTGCTGCC...GCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp GGCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAAAGCTCAAGGAGGCCTaGCTGCCTTCCTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: GIAHLGSARGWGIPFPSQKLKEA*LPSWTP
Trigger: TGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTT...TTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp ACTGGGTGGAGCCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAACTAGTAGGAGTGACTaGTTCCTCCTTGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: TGWSPPKLKEACLPSWTPTSRSD*FLLVRL
Trigger: GAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGT...TGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCTCCACCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp GGAACACCAGGAGATTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGATTGCCTGGTTGTCATaGCAGCCTGCCAATAACTGC +
Preference number: 4 (lower is better)
Translates to: GTPGDYIPHLARRVPHPRIAWLS*QPANNC
Trigger: GCAGTTATTGGCAGGCTGCCATGACAACCAGGCAAT...CCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAATCTCCTGGTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGCTGGCTGCAATGGCTaGGTGCCCGTGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVAGCNG*VPVAVL
Trigger: CAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGC...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATCTGGGTGACCGGTGCTaGCTGCAATGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHLGDRC*LQWLGA
Trigger: GGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAG...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TTCATCTCACTGGGGCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGACCGAGGTTCCAAGATaGCCAAAAAGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FISLGLVTQWVQPKEQRGTEVPR*PKRNSS
Trigger: GGAGCTGTTCCTTTTTGGCCATCTTGGAACCTCGGT...CCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCCCTTGGGTGGCTGGGTaGCCGGTGCTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSPWVAG*PVLAAM
Trigger: CATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGG...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGGACGCAGAAGACAGGTaGTTTCTGCATTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLDAEDR*FLHFQQ
Trigger: CTGTTGGAAATGCAGAAATCACCTGTCTTCTGCGTC...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGCCAAAATCGCTCATTTaGAGGGTACACACGGACTAC +
Preference number: 4 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLPKSLI*RVHTDY
Trigger: GTAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGG...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp ACACCTCCCAGGAGGGGCCAACCGACACCTCATACAGCCAGGTGCCCTTCTGAGAAGTGCCAGAAATACTaGTGCATTGGGGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: TPPRRGQPTPHTARCPSEKCQKY*CIGVPH
Trigger: ATGTGGAACCCCAATGCACCAGTATTTCTGGCACTT...CTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCCCTCCTGGGAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp TTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGTCTCCAGCATTGGTATaGCCTTTTCCCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: LYPAPGSESPTPTEPHSLSPALV*PFPSDC
Trigger: ACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGA...CAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGRCWLQ*LGARGR
Trigger: ACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTCTGGGTGACCGGTGCTaGCTGCAATGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCALGDRC*LQWLGA
Trigger: GGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAG...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGATTATATCCCGCACCTaGCTCGGAGAGTCCCACACC +
Preference number: 4 (lower is better)
Translates to: QKGTAPVYSSQRERRRRQIISRT*LGESHT
Trigger: GGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAAT...CTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCCTTGGGTGGCTGGGTaGCCGGTGCTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLPWVAG*PVLAAM
Trigger: CATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCCTTGGGTGGCTGGGTaGCCGGTGCTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIPWVAG*PVLAAM
Trigger: CATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACCTTGGGTGGCTGGGTaGCCGGTGCTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGPWVAG*PVLAAM
Trigger: CATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGCGTCTCCGCGGGCGCTaGCGAGACAACAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWRLRGR*RDNNSF
Trigger: GAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACG...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp AGCCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGGGTTTCCTCGTTAAGTaGCAGAAATACTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: SPPKLKEACLPSWTPVLGGFLVK*QKYWCI
Trigger: AATGCACCAGTATTTCTGGCACTTAACGAGGAAACC...CCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp CACCTCCCAGGAGGGGCCAACCGACACCTCATACAGCCAGGTGCCCTTCTGAGAGACTACCATATCCACTaGCACAGTCATGTATACTTG +
Preference number: 4 (lower is better)
Translates to: HLPGGANRHLIQPGALLRDYHIH*HSHVYL
Trigger: CAAGTATACATGACTGTGGCAGTGGATATGGTAGTC...TCTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCCCTCCTGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp GCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGTACCTCTGCCCTCAATaGTTCAGGGACACCACTCTT +
Preference number: 4 (lower is better)
Translates to: AHLGSARGWGIPFPSQGKYLCPQ*FRDTTL
Trigger: AAGAGTGGTGTCCCTGAAGCATTGAGGGCAGAGGTA...CTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp GCTTGTCACACAGTGGGTGCAGCCCAAGGAGCAGCGTGGGGCATTGCTCACCTGAAGACAGGTGATTTCTaGATTTCCAACAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: ACHTVGAAQGAAWGIAHLKTGDF*ISNRGT
Trigger: GGTACCTCTGTTGGAAATGCAGAAATCACCTGTCTT...CAGGTGAGCAATGCCCCACGCTGCTCCTTGGGCTGCACCCACTGTGTGACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGTCGCTCCGCCACCGCTaGAGCCCGAGGAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKSLRHR*SPRRAE
Trigger: CTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGA...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTGCTGGCTGCAATGGCTaGGTGCCCGTGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAAGCNG*VPVAVL
Trigger: CAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGC...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGCGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLRCWLQ*LGARGR
Trigger: ACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCG...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATCGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDRCWLQ*LGARGR
Trigger: ACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCG...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTGGGTGACCGGTGCTaGCTGCAATGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLGDRC*LQWLGA
Trigger: GGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTCTCCTTGGGTGGCTaGGTGACCGGTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLSLGG*VTGAGC
Trigger: GCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACTCTCCTTGGGTGGCTaGGTGACCGGTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLSLGG*VTGAGC
Trigger: GCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCTCTCCTTGGGTGGCTaGGTGACCGGTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISILSLGG*VTGAGC
Trigger: GCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTCTCCTTGGGTGGCTaGGTGACCGGTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLLSLGG*VTGAGC
Trigger: GCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAG...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp GCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGTGCAAGGGGTTaGGGAATTCCCTTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: ALLTWEVQGVGEFPFLAKGSARG*GIPFPS
Trigger: GCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCC...CTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGAACCTCCCGAGTAGCTaGGATTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVNLPSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAATCCCAGCTACTCGGGAGGTT...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCGGCCATCACCCTCACTaGGATTCCCTTCTACCATTG +
Preference number: 4 (lower is better)
Translates to: TLLWDLPILVSQVFKRAIGHHPH*DSLLPL
Trigger: CAATGGTAGAAGGGAATCCCAGTGAGGGTGATGGCC...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCTCCACCTCGCGCTCTaGAGCCGGGCCGGTCCCGTT +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVLHLAL*SRAGPV
Trigger: AACGGGACCGGCCCGGCTTCAGAGCGCGAGGTGGAG...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp GGAACACCAGGAGATTATATCCCGCACCTGGCTCGGAGAGTCCCACACCCACGGATCACCTGTTCCACTTaGGAGTTCATTATCACTCTC +
Preference number: 4 (lower is better)
Translates to: GTPGDYIPHLARRVPHPRITCST*EFIITL
Trigger: GAGAGTGATAATGAACTCTCAAGTGGAACAGGTGAT...CCGTGGGTGTGGGACTCTCCGAGCCAGGTGCGGGATATAATCTCCTGGTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp CAAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGTGCCAGAAATACTGGTaGATTGGGGTTCCACATGCC +
Preference number: 4 (lower is better)
Translates to: QKGTAPVYSSQRERRRRQCQKYW*IGVPHA
Trigger: GGCATGTGGAACCCCAATGCACCAGTATTTCTGGCA...CTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp AGTCCCACACCCACGGAGCCTCACTCACTGCTAACACAGCAGTCTGAGATCAAGGTATCTATCCAGCATTaGCTGGTTGTCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPTPTEPHSLLTQQSEIKVSIQH*LVVMAA
Trigger: GGCTGCCATGACAACCAGGCAATGCTGGATAGATAC...CTTGATCTCAGACTGCTGTGTTAGCAGTGAGTGAGGCTCCGTGGGTGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp GGAGATTTCTTCCATCATCTTGCCAGCTGGCCTTTCCACAGCAGCAGCTGCTGTTCCTTGCTGGCTGCTTaGTGTTTCTCCAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: GDFFHHLASWPFHSSSCCSLLAA*CFSSLV
Trigger: TACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGA...ACAGCAGCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGTGACCGGTGCTGGCTaGAATGGCTGGGTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLVTGAG*NGWVPV
Trigger: CACGGGCACCCAGCCATTGCAGCCAGCACCGGTCAC...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGTGACCGGTGCTGGCTaGAATGGCTGGGTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDVTGAG*NGWVPV
Trigger: CACGGGCACCCAGCCATTGCAGCCAGCACCGGTCAC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATGGCTGGGTGACCGGTaGTGGCTGCAATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGWLGDR*WLQWLG
Trigger: ACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGAAGGCTGGAACTATGTaGTCTCCTTGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVKAGTM*SPWVAG
Trigger: CCCAGCCACCCAAGGAGAGCACATAGTTCCAGCCTT...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AGCCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGTCAGGCAGCAACATTTaGCATTCTGCAATATTTGCT +
Preference number: 4 (lower is better)
Translates to: SPPKLKEACLPSWTPVLGSGSNI*HSAIFA
Trigger: AGCAAATATTGCAGAATGGCAAATGTTGCTGCCTGA...CCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCCAGGATTCTACCATCTaGTTCCCCACCTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TLLWDLPILVSQVFKRAIQDSTI*FPTLPL
Trigger: AAGAGGCAAGGTGGGGAAGCAGATGGTAGAATCCTG...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTCGCTCCGCCACCGCTaGAGCCCGAGGAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLSLRHR*SPRRAE
Trigger: CTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGA...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp CACCTCCCAGGAGGGGCCAACCGACACCTCATACAGCCAGGTGCCCTTCTGAGATACTTGCTTATCTTTTaGGGTTTCCTCGTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: HLPGGANRHLIQPGALLRYLLIF*GFLVKC
Trigger: GCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTA...TCTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCCCTCCTGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp GCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGGAAGTTGCATCTCCAGCATTaGTATGGCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AHLGSARGWGIPFPSQGKLHLQH*YGLFPQ
Trigger: CTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAA...CTTCCCTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGCTGGCTGCAATGGCTaGGTGCCCGTGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIAGCNG*VPVAVL
Trigger: CAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGCTCTCCTTGGGTGGCTaGGTGACCGGTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLLSLGG*VTGAGC
Trigger: GCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAG...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGGGGAGAAGGGCCGCCTaGCAGGAAGAGGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMGRRAA*QEEARE
Trigger: CTCCCTCGCCTCTTCCTGCCAGGCGGCCCTTCTCCC...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp AGTCCCACACCCACGGAGCCTCACTCACTGCTAACACAGCAGTCTGAGATCAAGGCCATTGCTGAAGCTTaGGTAGGTAAACAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPTPTEPHSLLTQQSEIKAIAEA*VGKQSS
Trigger: GCTGCTTTGTTTACCTACTCAAGCTTCAGCAATGGC...CTTGATCTCAGACTGCTGTGTTAGCAGTGAGTGAGGCTCCGTGGGTGTGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGTCCTTGCTGGCTGCTTaGTGTTTCTCCAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVSLLAA*CFSSLV
Trigger: TACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGA...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATCTCCTCCTTGCTGGCTaGTTGCTGTTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHLLLAG*LLFLQP
Trigger: AGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTGGCTGGGTGACCGGTaGTGGCTGCAATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLWLGDR*WLQWLG
Trigger: ACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATTGGCTGGGTGACCGGTaGTGGCTGCAATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDWLGDR*WLQWLG
Trigger: ACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCA...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACACGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTRCWLQ*LGARGR
Trigger: ACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCG...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCCTGGGTGACCGGTGCTaGCTGCAATGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVLGDRC*LQWLGA
Trigger: GGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAG...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATCTTAGCAGCTGGGGCTaGGCAGGGCACCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDLSSWG*AGHPFF
Trigger: GAAGAAGGGGTGCCCTGCCCAGCCCCAGCTGCTAAG...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR TCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCTCCACCTCGCGCTCTaGAGCCGGGCCGGTCCCGTT +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPLHLAL*SRAGPV
Trigger: AACGGGACCGGCCCGGCTTCAGAGCGCGAGGTGGAG...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTGGAAGTGGGGCTGACTaGGAAACTTTGTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGGSGAD*ETLSLI
Trigger: AATGAGGGACAAAGTTTCTCAGTCAGCCCCACTTCC...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGAAAGGAAGTGGGGCTaGCTGAGAAACTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVERKWG*LRNFVP
Trigger: AGGGACAAAGTTTCTCAGTCAGCCCCACTTCCTTTC...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATGTGACCGGTGCTGGCTaGAATGGCTGGGTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDVTGAG*NGWVPV
Trigger: CACGGGCACCCAGCCATTGCAGCCAGCACCGGTCAC...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTGTGACCGGTGCTGGCTaGAATGGCTGGGTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVVTGAG*NGWVPV
Trigger: CACGGGCACCCAGCCATTGCAGCCAGCACCGGTCAC...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp TCAGGTTTGAACCGAGGTTCCAAGATGGCCAAAAAGGAACAGCTCCAGTCTACATGCTCACCTGGGAAGTaGAAGGGGTTGGGGAATTCC +
Preference number: 4 (lower is better)
Translates to: SGLNRGSKMAKKEQLQSTCSPGK*KGLGNS
Trigger: GGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCA...TGTAGACTGGAGCTGTTCCTTTTTGGCCATCTTGGAACCTCGGTTCAAACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp TGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCACCCTCATCTGCTTCCCCACCTTaGCTCTTTAATTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: CGTSQSLCHRCSRGPSPSSASPP*LFNFTG
Trigger: TCCTGTGAAATTAAAGAGGCAAGGTGGGGAAGCAGA...TGAGGGTGATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCGGGTTAAATGATGGCTaGCAACATGAAATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLLWDLPILVSQVFKRAIGLNDG*QHEMPG
Trigger: TCCTGGCATTTCATGTTGGCAGCCATCATTTAACCC...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTCCGAGATCACGCCACTaGACTCCAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSPRSRH*TPAWET
Trigger: TGTCTCCCAGGCTGGAGTGCAGTGGCGTGATCTCGG...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGCTGTTTCTCCAGCCTaGTACTCAACTGCGAACAGA +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVAVSPA*YSTANR
Trigger: TCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCGGTGCTGGCTGCAATaGCTGGGTGCCCGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHRCWLQ*LGARGR
Trigger: ACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATGAGAGTGGTCATGCCTaGCCCCACAGTGTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHESGHA*PHSVLY
Trigger: ATAAAGCACACTGTGGGGCCAGGCATGACCACTCTC...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTGCTTTTGGGACATCTTaGATCTGGGACCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGAFGTS*IWDHLQ
Trigger: CTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGC...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp TCCCAACTACTTGGGAAGCTGAGGCTGGAGAATCACTaGAACCCAAGAGGTGTAGGTTGCAGTAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SQLLGKLRLENH*NPRGVGCSKPR
Trigger: TCTCGGCTTACTGCAACCTACACCTCTTGGGTTCAAGTGATTCTCCAGCCTCAGCTTCCCAAGTAGTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCTCCAAACGAATGGTCTaGAATCTCACTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: TLLWDLPILVSQVFKRAISKRMV*NLTGTL
Trigger: CAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGA...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATGGAAAAGATCCACTGTaGGCAACTTGGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHGKDPL*ATWCIL
Trigger: GAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCC...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCACCCTCATTTCACTACACTTTCTaGTACCTTGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CGTSQSLCHRCSRGPSPSFHYTF*YLAWSA
Trigger: TGCAGACCAAGCAAGGTATCAGAAAGTGTAGTGAAA...TGAGGGTGATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGGGCAGAAGAATCGTTTaGACCCAGGAGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWGRRIV*TQEVEI
Trigger: GATCTCCACCTCCTGGGTTCAAACGATTCTTCTGCC...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCGTCTCCGCGGGCGCTaGCGAGACAACAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKRLRGR*RDNNSF
Trigger: GAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACG...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGCTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVLVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACTCCTCCTTGCTGGCTaGTTGCTGTTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLLLAG*LLFLQP
Trigger: AGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTCCTCCTTGCTGGCTaGTTGCTGTTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLLLAG*LLFLQP
Trigger: AGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGTGACCGGTGCTGGCTaGAATGGCTGGGTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHVTGAG*NGWVPV
Trigger: CACGGGCACCCAGCCATTGCAGCCAGCACCGGTCAC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAAGGCTGGAACTATGTaGTCTCCTTGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLKAGTM*SPWVAG
Trigger: CCCAGCCACCCAAGGAGAGCACATAGTTCCAGCCTT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAAGGCTGGAACTATGTaGTCTCCTTGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIKAGTM*SPWVAG
Trigger: CCCAGCCACCCAAGGAGAGCACATAGTTCCAGCCTT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AGTCCCACACCCACGGAGCCTCACTCACTGCTAACACAGCAGTCTGAGATCAAGCCATTCTGCAATATTTaGTGTTCTGCAGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: SPTPTEPHSLLTQQSEIKPFCNI*CSAAST
Trigger: AGTGGAAGCTGCAGAACAGCAAATATTGCAGAATGG...CTTGATCTCAGACTGCTGTGTTAGCAGTGAGTGAGGCTCCGTGGGTGTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp TCCTTGCTGGCTGCTTGCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAGATCAAGGAAAAATCCTACTaGAGCTCAGTGCCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: SLLAACCFSSLVLNCEQIKEKSY*SSVPVY
Trigger: GTACACTGGCACTGAGCTGCAGTAGGATTTTTCCTT...GATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATTTGCTCCTCTCGTCGTaGATGTCCTGGGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHLLLSS*MSWDFL
Trigger: CAAAAAGTCCCAGGACATGCACGACGAGAGGAGCAA...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGCACAAACAGACGATaGCCCATCCCCAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIGTNRR*PIPRSS
Trigger: GGAACTTCTGGGGATGGGGCATCGTCTGTTTGTGCC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp TGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCACCCTCAAACAAGAAGACTGCTTaGCCTTTTCTCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: CGTSQSLCHRCSRGPSPSNKKTA*PFLGIS
Trigger: AGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTT...TGAGGGTGATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCACCTTCTGGAACATTTaGTACATACAGGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: TLLWDLPILVSQVFKRAITFWNI*YIQGNR
Trigger: CCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGT...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATGTTCCAACCTCATGCTaGCCTCCTGTAATCTTCGGT +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHVPTSC*PPVIFG
Trigger: ACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAAC...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGGTCCTCTCTGCCTGTaGCTGCTAGTTTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSGPLCL*LLVSKH
Trigger: GTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTGAAAATGTCACTGTCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLPVAASFKAPSLLKMSLSVSIP*SSLPVA
Trigger: AGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGA...CAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCTGGGTGACCGGTGCTaGCTGCAATGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLGDRC*LQWLGA
Trigger: GGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTACTGGGTGACCGGTGCTaGCTGCAATGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVLGDRC*LQWLGA
Trigger: GGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAG...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGAGAGTGGTCATGCCTaGCCCCACAGTGTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSESGHA*PHSVLY
Trigger: ATAAAGCACACTGTGGGGCCAGGCATGACCACTCTC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCATCATCTTGCCAGCTaGCCTTTCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLHHLAS*PFHSSS
Trigger: GCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATG...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTGAAAATGTCACTGTCTTCATCGTGCAGCTaGCTGAAAACATGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SLPVAASFKAPSLLKMSLSSSCS*LKTWAS
Trigger: TGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGA...CAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATAACCTCCCGAGTAGCTaGGATTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDNLPSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAATCCCAGCTACTCGGGAGGTT...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp GCTTTGAAGAGAGTAGTGGTTCTCCCAGCATGTAGTTaGGGACCTGAGAATGGACAGACTGCCTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: ALKRVVVLPACS*GPENGQTASSS
Trigger: ACTTGAGGAGGCAGTCTGTCCATTCTCAGGTCCCAAACTACATGCTGGGAGAACCACTACTCTCTTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CAA 72 bp TTCTTCAGCTTCTTGGTTGGTACCATAGACCTGGGCTaGCTGATGGCCACCAGACTAGTGAGGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FFSFLVGTIDLG*LMATRLVRKSS
Trigger: TGAAGACTTCCTCACTAGTCTGGTGGCCATCAGCAAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 72 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAGTGTTTGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: SLPVAASFKAPS*LKMSLQCLHAI
Trigger: GATGGCATGCAAACACTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTTCATCATCCTGGGGTaGCATTGGACCCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSFIILG*HWTPST
Trigger: AGTGGAGGGGGTCCAATGTCACCCCAGGATGATGAA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCCTTGGGTGGCTGGGTaGCCGGTGCTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVPWVAG*PVLAAM
Trigger: CATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATCATCGTGCAGCTGGCTaGAAACATGGGCGTCATAGG +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDHRAAG*KHGRHR
Trigger: CCTATGACGCCCATGTTTTCAGCCAGCTGCACGATG...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392064.6
CDS-3UTR TCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCCATCGTGCAGCTGGCTaGAAACATGGGCGTCATAGG +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSHRAAG*KHGRHR
Trigger: CCTATGACGCCCATGTTTTCAGCCAGCTGCACGATG...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCCATCAGTTACACATGTaGTTCTCCTGGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSHQLHM*FSWVTG
Trigger: GCCAGTCACCCAGGAGAATCACATGTGTAACTGATG...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAAGGTGCAGCCAAGGTTaGAGTCCTCATTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELRCSQG*SPHFGH
Trigger: GTGACCAAAATGAGGACTTCAACCTTGGCTGCACCT...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGGAAGTGGGGCTGACTaGGAAACTTTGTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELGSGAD*ETLSLI
Trigger: AATGAGGGACAAAGTTTCTCAGTCAGCCCCACTTCC...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTGGCAACACAAAGCATTaGAAACATCACTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGGNTKH*KHHWLT
Trigger: TGTGAGCCAGTGATGTTTTCAATGCTTTGTGTTGCC...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGGCAACACAAAGCATTaGAAACATCACTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVGNTKH*KHHWLT
Trigger: TGTGAGCCAGTGATGTTTTCAATGCTTTGTGTTGCC...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GAAAACCCATGGACAATGTTCCGATGCCACGGGTGCCAACATTCGGGCAGACACCTTCCCCGAACATCATaGTGCTATGATTACAATCTA +
Preference number: 4 (lower is better)
Translates to: ENPWTMFRCHGCQHSGRHLPRTS*CYDYNL
Trigger: TAGATTGTAATCATAGCATCATGATGTTCGGGGAAG...GTGTCTGCCCGAATGTTGGCACCCGTGGCATCGGAACATTGTCCATGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR GCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTCGTCTCCGCGGGCGCTaGCGAGACAACAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLRLRGR*RDNNSF
Trigger: GAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACG...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTCCTTGCTGGCTGCTTaGTGTTTCTCCAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISISLLAA*CFSSLV
Trigger: TACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTCCTTGCTGGCTGCTTaGTGTTTCTCCAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLSLLAA*CFSSLV
Trigger: TACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATCTCCTCCTTGCTGGCTaGTTGCTGTTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDLLLAG*LLFLQP
Trigger: AGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATTCCCTGGTCCTCTCTaGCTGTGGCTGCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGFPGPL*LWLLVS
Trigger: TGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTTCCCTGGTCCTCTCTaGCTGTGGCTGCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLFPGPL*LWLLVS
Trigger: TGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGGTGACCGGTGCTGGCTaGAATGGCTGGGTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVVTGAG*NGWVPV
Trigger: CACGGGCACCCAGCCATTGCAGCCAGCACCGGTCAC...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTGGCTGGGTGACCGGTaGTGGCTGCAATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHWLGDR*WLQWLG
Trigger: ACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTGTGGACAATGTTCCGATaGCACGGGTGCCAACATTCG +
Preference number: 4 (lower is better)
Translates to: NLNLGSRKPMDNVPMPRVWTMFR*HGCQHS
Trigger: CGAATGTTGGCACCCGTGGCATCGGAACATTGTCCA...CACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVSKSMM*NTMQSG
Trigger: CCCACTCTGCATGGTGTTCCACATCATTGACTTACT...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367687.5
CDS-3UTR CCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGGTTCCAACCTCATGCTaGCCTCCTGTAATCTTCGGT +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLVPTSC*PPVIFG
Trigger: ACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAAC...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTTCCAACCTCATGCTaGCCTCCTGTAATCTTCGGT +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELVPTSC*PPVIFG
Trigger: ACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAAC...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGCTGTTTCTCCAGCCTaGTACTCAACTGCGAACAGA +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSAVSPA*YSTANR
Trigger: TCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTTCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCASVSIP*SSLPVA
Trigger: AGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGA...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTATCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELSVSIP*SSLPVA
Trigger: AGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGA...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCCTGAATTTTACACTTaGCCTCCACCAACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGPEFYT*PPPTAV
Trigger: AACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGG...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTGGGTGACCGGTGCTaGCTGCAATGGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLGDRC*LQWLGA
Trigger: GGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGAGAGTGGTCATGCCTaGCCCCACAGTGTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIESGHA*PHSVLY
Trigger: ATAAAGCACACTGTGGGGCCAGGCATGACCACTCTC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCCAATGATCGCTGATTaGTTCTTTCCTTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGPMIAD*FFPLDR
Trigger: CCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGG...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATCATCATCTTGCCAGCTaGCCTTTCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYHHLAS*PFHSSS
Trigger: GCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATG...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392064.6
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCTCTATTCAGCACAATaGCTGAACCTGGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGLYSAQ*LNLGLF
Trigger: AAAAAGCCCCAGGTTCAGCCATTGTGCTGAATAGAG...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTGCAGAGCTGTGGTCTaGCCTTCTGGCTTTCATCAT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSCRAVV*PSGFHH
Trigger: ATGATGAAAGCCAGAAGGCCAGACCACAGCTCTGCA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTGGGACATCTTGGATCTaGGACCATCTCCAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAGTSWI*DHLQPY
Trigger: ATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCC...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTGCTTTTGGGACATCTTaGATCTGGGACCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAAFGTS*IWDHLQ
Trigger: CTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGC...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp GGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GHQEESSQISIG*NIVLLCLGKAG
Trigger: TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGCATCGTGCAGCTGGCTaGAAACATGGGCGTCATAGG +
Preference number: 4 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWHRAAG*KHGRHR
Trigger: CCTATGACGCCCATGTTTTCAGCCAGCTGCACGATG...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCGGAAAAGATCCACTGTaGGCAACTTGGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGGKDPL*ATWCIL
Trigger: GAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCC...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATGCAGAAGACACTGGTTaGATGGCATTCCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHAEDTG*MAFLLV
Trigger: CACTAATAGGAATGCCATTCAACCAGTGTCTTCTGC...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTGTGATTCTCCTGGGTaGCTGGCTCACTCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSCDSPG*LAHSFK
Trigger: TTTAAAGGAGTGAGCCAGTCACCCAGGAGAATCACA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCAGGTACCTAAGTGTTTaGTGCAAAGGTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSRYLSV*CKGWWE
Trigger: CTCCCACCAACCTTTGCATCAAACACTTAGGTACCT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTGAAGTCACCATCCCAGTaGACTGAAGGGCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: NLNLGSRKPMDNVPMPRVKSPSQ*TEGQRY
Trigger: GTATCTCTGCCCTTCAGTTCACTGGGATGGTGACTT...CACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR GCA 90 bp CAAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGACAGTCATGTATACTTaGTTATCTTTTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: QKGTAPVYSSQRERRRRQTVMYT*LSFGVS
Trigger: GGAAACCCCAAAAGATAAGCAAGTATACATGACTGT...CTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAGCCCTTTCGGTCGTaGACCAAGGTTACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMQPFRS*TKVTVP
Trigger: TGGCACAGTAACCTTGGTGCACGACCGAAAGGGCTG...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCAGCCTGCCAATAACTaGCATACCTCTGCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLQPANN*HTSALN
Trigger: ATTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTG...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTCAGAAAAATGGCTATaGAGGTCCGGTAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSSEKWL*RSGSCS
Trigger: GGAACAGCTACCGGACCTGCATAGCCATTTTTCTGA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347255.6
ENST00000367687.5
CDS-3UTR GCA 90 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTGAAAATGTCACTGCCTTCAAAATCAGCCTaGAGAAGGTCTTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SLPVAASFKAPSLLKMSLPSKSA*RRSSFE
Trigger: CTCAAAGGAAGACCTTCTGCAGGCTGATTTTGAAGG...CAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCCTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSLVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTACTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELLVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR GCA 90 bp GAGGAAGTCTTCATCGTGCAGCTGGCTGAAAACATGGGCGTCATAGGCTACCATAGCCTGGTACTCAACTaGGAACAGATCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: EEVFIVQLAENMGVIGYHSLVLN*EQICLY
Trigger: GTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCT...ATGGTAGCCTATGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTCCTTGCTGGCTGCTTaGTGTTTCTCCAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLSLLAA*CFSSLV
Trigger: TACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AGAGTTTTTCGCAGCTTGGATTTCATTCATAAGGGCTCCTCTCTGATGTTCAAGCTCCTCCTTGCTGGCTaGTTGCTGTTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RVFRSLDFIHKGSSLMFKLLLAG*LLFLQP
Trigger: AGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG...CTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTTCCCTGGTCCTCTCTaGCTGTGGCTGCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLFPGPL*LWLLVS
Trigger: TGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTTCCCTGGTCCTCTCTaGCTGTGGCTGCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSFPGPL*LWLLVS
Trigger: TGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTGGCTGGGTGACCGGTaGTGGCTGCAATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVWLGDR*WLQWLG
Trigger: ACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCAAGGCTGGAACTATGTaGTCTCCTTGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVKAGTM*SPWVAG
Trigger: CCCAGCCACCCAAGGAGAGCACATAGTTCCAGCCTT...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp AAAAAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGCAACATTTGCCATTCTaGAATATTTGCTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KKEQLQSTAPSVSDAEDRQHLPF*NICCSA
Trigger: TGCAGAACAGCAAATATTGCAGAATGGCAAATGTTG...CCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR GCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGTTTCTTCCATCATCTTaGCAGCTGGCCTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLFLPSS*QLAFPQ
Trigger: CTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAA...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392064.6
CDS-3UTR GCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGAGGAAGTCTTCATCGTaGAGCTGGCTGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLRKSSS*SWLKTW
Trigger: CCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392064.6
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTACTCATTCACCAGCTTaGTCCTCTCGTCGTGCATGT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISITHSPA*SSRRAC
Trigger: ACATGCACGACGAGAGGAGCAAGCTGGTGAATGAGT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCCATCAAAATCTGCTTTaGATAGAATGGTTACACTGG +
Preference number: 4 (lower is better)
Translates to: TLLWDLPILVSQVFKRAIHQNLL*IEWLHW
Trigger: CCAGTGTAACCATTCTATGCAAAGCAGATTTTGATG...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACACTATCCAGCATTGCCTaGTTGTCATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTLSSIA*LSWQPA
Trigger: GGCAGGCTGCCATGACAACCAGGCAATGCTGGATAG...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCTATCCAGCATTGCCTaGTTGTCATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMLSSIA*LSWQPA
Trigger: GGCAGGCTGCCATGACAACCAGGCAATGCTGGATAG...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGTTCCAACCTCATGCTaGCCTCCTGTAATCTTCGGT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLVPTSC*PPVIFG
Trigger: ACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAAC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGTTCCAACCTCATGCTaGCCTCCTGTAATCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIVPTSC*PPVIFG
Trigger: ACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAAC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATAAGACTTCTTTTAGCTaGGCAGTCTCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHKTSFS*AVSSSC
Trigger: GCAAGAGGAAGAGACTGCCCAGCTAAAAGAAGTCTT...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGCTGTTTCTCCAGCCTaGTACTCAACTGCGAACAGA +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIAVSPA*YSTANR
Trigger: TCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTCCTCTCTGCCTGTaGCTGCTAGTTTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLGPLCL*LLVSKH
Trigger: GTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACC...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSVSIP*SSLPVA
Trigger: AGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISISVSIP*SSLPVA
Trigger: AGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGGCTGGCTGCAATGGCTaGGTGCCCGTGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVAGCNG*VPVAVL
Trigger: CAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGC...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGAGAGTGGTCATGCCTaGCCCCACAGTGTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDESGHA*PHSVLY
Trigger: ATAAAGCACACTGTGGGGCCAGGCATGACCACTCTC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACACATCATCTTGCCAGCTaGCCTTTCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTHHLAS*PFHSSS
Trigger: GCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATG...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATCTTCATCGTGCAGCTaGCTGAAAACATGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSSSCS*LKTWAS
Trigger: TGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000469553.6
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCCTTCAGCTTCTTGGTTaGTACCATAGACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSLQLLG*YHRPGL
Trigger: AAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAG...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392064.6
CDS-3UTR CCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGCAGCCCGTCTATTCCTaGCACTTCATTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLQPVYS*HFISRC
Trigger: ACATCTGGAAATGAAGTGCCAGGAATAGACGGGCTG...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCCAGCCCGTCTATTCCTaGCACTTCATTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSQPVYS*HFISRC
Trigger: ACATCTGGAAATGAAGTGCCAGGAATAGACGGGCTG...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATCTCTATTCAGCACAATaGCTGAACCTGGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHLYSAQ*LNLGLF
Trigger: AAAAAGCCCCAGGTTCAGCCATTGTGCTGAATAGAG...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATGCAGAGCTGTGGTCTaGCCTTCTGGCTTTCATCAT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGCRAVV*PSGFHH
Trigger: ATGATGAAAGCCAGAAGGCCAGACCACAGCTCTGCA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGAGAGGAAGAATGTGTTaGGACAGTTCTAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVRGRMC*DSSSSV
Trigger: CACTGAACTAGAACTGTCCCAACACATTCTTCCTCT...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTACAAGCCAGTCTGTGGTaGGAATTGTCAGCTAATGTC +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELQASLW*ELSANV
Trigger: GACATTAGCTGACAATTCCCACCACAGACTGGCTTG...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGTCCTAACCCTTCTGTaGGACCTCCCAATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSVLTLL*DLPILV
Trigger: CACAAGGATTGGGAGGTCCCACAGAAGGGTTAGGAC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGCTCCACCACCTCTGTaGCTACCATATCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTAPPPL*LPYPLP
Trigger: TGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGC...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGGCTCCACCACCTCTGTaGCTACCATATCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKAPPPL*LPYPLP
Trigger: TGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGC...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACACATCGTGCAGCTGGCTaGAAACATGGGCGTCATAGG +
Preference number: 4 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTHRAAG*KHGRHR
Trigger: CCTATGACGCCCATGTTTTCAGCCAGCTGCACGATG...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTAGCATTAAACTAAGATaGTGTGAGCCTGACCTCTAT +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGSIKLR*CEPDLY
Trigger: ATAGAGGTCAGGCTCACATCATCTTAGTTTAATGCT...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGTAGTTTGGTTGGTTTaGAAGGATCAGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLVVWLV*KDQRPP
Trigger: TGGAGGCCTCTGATCCTTTCAAACCAACCAAACTAC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATCATCAGTTACACATGTaGTTCTCCTGGGTGACTGGC +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYHQLHM*FSWVTG
Trigger: GCCAGTCACCCAGGAGAATCACATGTGTAACTGATG...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAGGTACCTAAGTGTTTaGTGCAAAGGTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIRYLSV*CKGWWE
Trigger: CTCCCACCAACCTTTGCATCAAACACTTAGGTACCT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAAGTTCTAGTTCAGTGTaGCTATCAGCATGGCGACGA +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSSSSV*LSAWRR
Trigger: TCGTCGCCATGCTGATAGTCACACTGAACTAGAACT...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATAGGTGCAGCCAAGGTTaGAGTCCTCATTTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDRCSQG*SPHFGH
Trigger: GTGACCAAAATGAGGACTTCAACCTTGGCTGCACCT...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAATCAGCATCTCCTATTaGGGTGCAGCCAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGISISY*GAAKVE
Trigger: TTCAACCTTGGCTGCACCTCAATAGGAGATGCTGAT...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATATTCTTGTGCTTTCATaGCACCAGAGTCTTTCGATG +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHILVLS*HQSLSM
Trigger: CATCGAAAGACTCTGGTGTCATGAAAGCACAAGAAT...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTACTTTGTCCCTCATTTaGACTAAGGATCCATGCATT +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGTLSLI*TKDPCI
Trigger: AATGCATGGATCCTTAGTTCAAATGAGGGACAAAGT...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGCACCCCTTCTTCCATaGGCACTAAGTAGGTATCCA +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYAPLLP*ALSRYP
Trigger: TGGATACCTACTTAGTGCTCATGGAAGAAGGGGTGC...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR TCA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGTCATTTCCTTGCTGTTaGGCTCCAGTGATTCGGAAA +
Preference number: 4 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWSFPCC*APVIRK
Trigger: TTTCCGAATCACTGGAGCTCAACAGCAAGGAAATGA...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGGCAGGTGGATCATTTaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSGRWII*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAAATGATCCACCTGCC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTGCCAGAAATACTGGTaGATTGGGGTTCCACATGCC +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSCQKYW*IGVPHA
Trigger: GGCATGTGGAACCCCAATGCACCAGTATTTCTGGCA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACACAGCCCTTTCGGTCGTaGACCAAGGTTACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTQPFRS*TKVTVP
Trigger: TGGCACAGTAACCTTGGTGCACGACCGAAAGGGCTG...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTTACCTCTGCCCTCAATaGTTCAGGGACACCACTCTT +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPYLCPQ*FRDTTL
Trigger: AAGAGTGGTGTCCCTGAAGCATTGAGGGCAGAGGTA...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTCAGAAAAATGGCTATaGAGGTCCGGTAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISISEKWL*RSGSCS
Trigger: GGAACAGCTACCGGACCTGCATAGCCATTTTTCTGA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR GCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTCAGAAAAATGGCTATaGAGGTCCGGTAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLSEKWL*RSGSCS
Trigger: GGAACAGCTACCGGACCTGCATAGCCATTTTTCTGA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR GCA 90 bp AATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTGTCAGAAAAATGGCTATaGAGGTCCGGTAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: NLNLGSRKPMDNVPMPRVSEKWL*RSGSCS
Trigger: GGAACAGCTACCGGACCTGCATAGCCATTTTTCTGA...CACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR GCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATTCTTGCATTTTCCTCTaGCCTGTATCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHSCIFL*PVSLWK
Trigger: CTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAGA...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367687.5
ENST00000489615.5
CDS-3UTR GCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGLILQA*SISLLA
Trigger: TGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAA...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367687.5
ENST00000489615.5
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISILVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACTGCAGTTTGGTTTGTaGCAGTTCCAGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLQFGL*QFQFHL
Trigger: GAGATGGAACTGGAACTGGCACAAACCAAACTGCAG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCTGCAGTTTGGTTTGTaGCAGTTCCAGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISILQFGL*QFQFHL
Trigger: GAGATGGAACTGGAACTGGCACAAACCAAACTGCAG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCAACATTGTGCTCTTGTaGTTGGGTAAGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSNIVLL*LGKAGT
Trigger: AGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAGATCTGTTTATACTCAGCAAAGGAAGTCTTCATCGTaGAGCTGGCTGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: AVSPAWYSTANRSVYTQQRKSSS*SWLKTW
Trigger: CCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCT...TTGCTGAGTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTCTGACTCAAAGGCATTaGAGTGAAGGAGAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCALTQRH*SEGEFR
Trigger: CCTAAACTCTCCTTCACTGCAATGCCTTTGAGTCAG...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTCCAGCCTTATTCTTGTaGTTTCATGACACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAPALFL*FHDTRV
Trigger: GACTCTGGTGTCATGAAAGCACAAGAATAAGGCTGG...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGATACCTTGCTTGGTCTaGAATTCTTCAGCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWIPCLV*NSSAEA
Trigger: GGCTTCTGCTGAAGAATTGCAGACCAAGCAAGGTAT...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTTCAGATCAGAAAAATaGCTATGCAGGTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSFRSEK*LCRSGS
Trigger: GCTACCGGACCTGCATAGCCATTTTTCTGATCTGAA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347255.6
ENST00000367687.5
CDS-3UTR CCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAAAGACTTCTTTTAGCTaGGCAGTCTCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELKTSFS*AVSSSC
Trigger: GCAAGAGGAAGAGACTGCCCAGCTAAAAGAAGTCTT...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTCTGTTTCAATTCCCTaGTCCTCTCTGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLSVSIP*SSLPVA
Trigger: AGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTTGTGCTCTTGTGCTTaGGTAAGGCTGGAACTATGT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSLCSCA*VRLELC
Trigger: ACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTATTGGTTCTTTCCTTTaGACAGGATTAACACTTCCC +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGIGSFL*TGLTLP
Trigger: GGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAAT...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACCATCATCTTGCCAGCTaGCCTTTCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNHHLAS*PFHSSS
Trigger: GCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATG...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGAACCAAATTTTGACATaGTTCAGGATGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVNQILT*FRMWEA
Trigger: AGCTTCCCACATCCTGAACCATGTCAAAATTTGGTT...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGGGACATCTTGGATCTaGGACCATCTCCAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDGTSWI*DHLQPY
Trigger: ATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp GGCAGCAACAGGAAGAGTGAGTATTACAACTCAGGTTaGAACCGAGGTTCCAAGATGGCCAAAAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: GSNRKSEYYNSG*NRGSKMAKKEQ
Trigger: CTGTTCCTTTTTGGCCATCTTGGAACCTCGGTTCAAACCTGAGTTGTAATACTCACTCTTCCTGTTGCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
3UTR CAA 72 bp TGGGTGCCCGTGGCCGTTTTGATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: WVPVAVLIEFRV*LNQEFFAAWIS
Trigger: TGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTATCAAAACGGCCACGGGCACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 72 bp CAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATGTGCTCTCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: QISIGLNIVLLC*GKAGTMCSPWV
Trigger: CACCCAAGGAGAGCACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 72 bp TCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTaGTGCTTGGGTAAGGCTGGAACTATGTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSQISIGLNIVL*CLGKAGTMCSP
Trigger: AGGAGAGCACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTTCTGTAATGAAGCTCTaGCCTCCATTTCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPSVMKL*PPFQFC
Trigger: GCAGAACTGAAATGGAGGTCAGAGCTTCATTACAGA...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGGGGGGTAGGAATAACTaGGTCTTTAACATCAGACAC +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLGGRNN*VFNIRH
Trigger: GTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCC...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATGGGATGCATACATATaGGCTTCCAGGTTCAGATCA +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGWDAYI*ASRFRS
Trigger: TGATCTGAACCTGGAAGCTCATATGTATGCATCCCA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCAAAGCAGTAAGTCAATaGTGTGGAACACCATGCAGA +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSKAVSQ*CGTPCR
Trigger: TCTGCATGGTGTTCCACATCATTGACTTACTGCTTT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347255.6
ENST00000367687.5
CDS-3UTR TCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATCTCTAGCTGTTTCCTaGAGACTTCTTTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSLAVS*RLLLAG
Trigger: CCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTCTCTAGCTGTTTCCTaGAGACTTCTTTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLSLAVS*RLLLAG
Trigger: CCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTCTCTAGCTGTTTCCTaGAGACTTCTTTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGSLAVS*RLLLAG
Trigger: CCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGA...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATACTACATGCTCTCTTTaGAAAATAGCCAAATGTGCC +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHTTCSL*KIAKCA
Trigger: GGCACATTTGGCTATTTTTCAAAGAGAGCATGTAGT...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367687.5
CDS-3UTR TCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATTGTGATTCTCCTGGGTaGCTGGCTCACTCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYCDSPG*LAHSFK
Trigger: TTTAAAGGAGTGAGCCAGTCACCCAGGAGAATCACA...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATATCAGCATCTCCTATTaGGGTGCAGCCAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYISISY*GAAKVE
Trigger: TTCAACCTTGGCTGCACCTCAATAGGAGATGCTGAT...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGAAGGGTCTAGCATGTaGGAATGTGTGAGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDEGSSM*ECVRVC
Trigger: ACACACTCTCACACATTCTCACATGCTAGACCCTTC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTCCAAAATCGCTCATTTaGAGGGTACACACGGACTAC +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPPKSLI*RVHTDY
Trigger: GTAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGG...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGGTATCTATCCAGCATTaGCTGGTTGTCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMVSIQH*LVVMAA
Trigger: GGCTGCCATGACAACCAGGCAATGCTGGATAGATAC...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp AATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTGTGTTCCTCTGGCATATaGAGCAGTAATACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NLNLGSRKPMDNVPMPRVCSSGI*SSNTAA
Trigger: TGCTGCTGTATTACTGCTGCATATGCCAGAGGAACA...CACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCCTTCAAAATCAGCCTaGAGAAGGTCTTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIPSKSA*RRSSFE
Trigger: CTCAAAGGAAGACCTTCTGCAGGCTGATTTTGAAGG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCCCTTCAAAATCAGCCTaGAGAAGGTCTTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGPSKSA*RRSSFE
Trigger: CTCAAAGGAAGACCTTCTGCAGGCTGATTTTGAAGG...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHLILQA*SISLLA
Trigger: TGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAA...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367687.5
ENST00000489615.5
CDS-3UTR GCA 90 bp TCTCTGCCTGTGGCTGCTAGTTTCAAAGCACCCTCCTTGCTGAAAATGTCACTGTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLPVAASFKAPSLLKMSLLILQA*SISLLA
Trigger: TGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAA...CAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCAGCCTGGTACTCAACTaGGAACAGATCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSSLVLN*EQICLY
Trigger: GTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGAGCCTGGTACTCAACTaGGAACAGATCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLSLVLN*EQICLY
Trigger: GTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATTTCCCTGGTCCTCTCTaGCTGTGGCTGCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNFPGPL*LWLLVS
Trigger: TGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAA...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATCCATCTCTCTCAGCTaGTTCTTAAGTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSISLS*FLSESF
Trigger: GAAGGACTCACTTAAGAAGCAGCTGAGAGAGATGGA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGCTGCAGTTTGGTTTGTaGCAGTTCCAGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLLQFGL*QFQFHL
Trigger: GAGATGGAACTGGAACTGGCACAAACCAAACTGCAG...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATCTGCAGTTTGGTTTGTaGCAGTTCCAGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDLQFGL*QFQFHL
Trigger: GAGATGGAACTGGAACTGGCACAAACCAAACTGCAG...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATAAGGCTGGAACTATGTaGTCTCCTTGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHKAGTM*SPWVAG
Trigger: CCCAGCCACCCAAGGAGAGCACATAGTTCCAGCCTT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCAACATTGTGCTCTTGTaGTTGGGTAAGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGNIVLL*LGKAGT
Trigger: AGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTT...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTaGTTGGGTAAGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLNIVLL*LGKAGT
Trigger: AGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAACATTGTGCTCTTGTaGTTGGGTAAGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISINIVLL*LGKAGT
Trigger: AGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCAGGAAGTCTTCATCGTaGAGCTGGCTGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSRKSSS*SWLKTW
Trigger: CCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCT...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR GCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATCTCTACTACCTCCTCTaGAAGGGAAAGGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYLYYLL*KGKVGV
Trigger: AACTCCTACCTTTCCCTTGCAGAGGAGGTAGTAGAG...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGCTGCCAACATGAAATaGCAGGATTCTACCATCTGC +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSAANMK*QDSTIC
Trigger: GCAGATGGTAGAATCCTGGCATTTCATGTTGGCAGC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGGCTTATTTGTTTGGCTaGCTGGAATATCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWAYLFG*LEYLQT
Trigger: CGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGC...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTTCTCCAGCATTGGTATaGCCTTTTCCCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPSPALV*PFPSDC
Trigger: ACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGA...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTTGCATCTCCAGCATTaGTATGGCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSLHLQH*YGLFPQ
Trigger: CTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACTCTGCTTCATCATCCTaGGGTGACATTGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNSASSS*GDIGPP
Trigger: AGGGGGTCCAATGTCACCCCAGGATGATGAAGCAGA...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGTCTGCTTCATCATCCTaGGGTGACATTGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKSASSS*GDIGPP
Trigger: AGGGGGTCCAATGTCACCCCAGGATGATGAAGCAGA...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTATTGCCTGGTTGTCATaGCAGCCTGCCAATAACTGC +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATAIAWLS*QPANNC
Trigger: GCAGTTATTGGCAGGCTGCCATGACAACCAGGCAAT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGATTGCCTGGTTGTCATaGCAGCCTGCCAATAACTGC +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMIAWLS*QPANNC
Trigger: GCAGTTATTGGCAGGCTGCCATGACAACCAGGCAAT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTTCAGATCAGAAAAATaGCTATGCAGGTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIFRSEK*LCRSGS
Trigger: GCTACCGGACCTGCATAGCCATTTTTCTGATCTGAA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR CCA 90 bp GCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAGATCTGTTTATACTCAGCAAGAACACCATGCAGAGTaGGAACTTGGCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: AVSPAWYSTANRSVYTQQEHHAE*ELGSKK
Trigger: CTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTC...TTGCTGAGTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp AATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTGGAACACCATGCAGAGTaGGAACTTGGCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: NLNLGSRKPMDNVPMPRVEHHAE*ELGSKK
Trigger: CTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTC...CACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLSKSMM*NTMQSG
Trigger: CCCACTCTGCATGGTGTTCCACATCATTGACTTACT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR CCA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCTTCAGCTTCTTGGTTaGTACTTTAATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: DRINTSLGIRLRRKPESGLQLLG*YFNIAS
Trigger: GCTTGCAATATTAAAGTACCAACCAAGAAGCTGAAG...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367687.5
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTTGTATCTATCCATTaGGTCTTCCTGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLVSIH*VFLLQL
Trigger: CAGCTGCAACAGGAAGACCCAATGGATAGATACAAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCTTGTATCTATCCATTaGGTCTTCCTGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISILVSIH*VFLLQL
Trigger: CAGCTGCAACAGGAAGACCCAATGGATAGATACAAG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAAGACTTCTTTTAGCTaGGCAGTCTCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLKTSFS*AVSSSC
Trigger: GCAAGAGGAAGAGACTGCCCAGCTAAAAGAAGTCTT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAAAGACTTCTTTTAGCTaGGCAGTCTCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGKTSFS*AVSSSC
Trigger: GCAAGAGGAAGAGACTGCCCAGCTAAAAGAAGTCTT...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAGGTCCTCTCTGCCTGTaGCTGCTAGTTTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGGPLCL*LLVSKH
Trigger: GTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACC...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACCTGAATTTTACACTTaGCCTCCACCAACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGPEFYT*PPPTAV
Trigger: AACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCCCTGAATTTTACACTTaGCCTCCACCAACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGPEFYT*PPPTAV
Trigger: AACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGG...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCCTGAATTTTACACTTaGCCTCCACCAACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLPEFYT*PPPTAV
Trigger: AACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGG...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTTGTGCTCTTGTGCTTaGGTAAGGCTGGAACTATGT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISILCSCA*VRLELC
Trigger: ACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATTGTGCTCTTGTGCTTaGGTAAGGCTGGAACTATGT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLCSCA*VRLELC
Trigger: ACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTTCTTCATCGTGCAGCTaGCTGAAAACATGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATASSSCS*LKTWAS
Trigger: TGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGA...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGTCTTCATCGTGCAGCTaGCTGAAAACATGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWSSSCS*LKTWAS
Trigger: TGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGA...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCCTTCAGCTTCTTGGTTaGTACCATAGACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSLQLLG*YHRPGL
Trigger: AAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAG...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTCTTCAGCTTCTTGGTTaGTACCATAGACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPLQLLG*YHRPGL
Trigger: AAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAG...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGCCAACACAGACACTTaGAATGCTGGGTTATGTTCC +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDANTDT*NAGLCS
Trigger: GGAACATAACCCAGCATTCCAAGTGTCTGTGTTGGC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTACTGCACAAGGCTTCTTaGAATCAAAGCGTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELLHKAS*NQSVKY
Trigger: GTACTTTACGCTTTGATTCCAAGAAGCCTTGTGCAG...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAATTCTCCTGGGTGACTaGCTCACTCCTTTAAAGATG +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGILLGD*LTPLKM
Trigger: CATCTTTAAAGGAGTGAGCCAGTCACCCAGGAGAAT...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTGTTCCAGAAAACCCATaGACAATGTTCCGATGCCAC +
Preference number: 4 (lower is better)
Translates to: KFESRFQKTHGQCSDATGVPENP*TMFRCH
Trigger: GTGGCATCGGAACATTGTCCATGGGTTTTCTGGAAC...ACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAAGGTTTAGGTCTCCCTaGGAGGACGTACAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGRFRSP*EDVQAS
Trigger: ACTGGCTTGTACGTCCTCCCAGGGAGACCTAAACCT...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGTAATCCCAACTACTTaGGAAGCTGAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSVIPTT*EAEAGE
Trigger: TTCTCCAGCCTCAGCTTCCCAAGTAGTTGGGATTAC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGTCCAAACGAATGGTCTaGAATCTCACTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLSKRMV*NLTGTL
Trigger: CAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGA...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTTTCATCATCCTGGGGTaGCATTGGACCCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPFIILG*HWTPST
Trigger: AGTGGAGGGGGTCCAATGTCACCCCAGGATGATGAA...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGATCACCTGTTCCACTTaGGAGTTCATTATCACTCTC +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLITCST*EFIITL
Trigger: GAGAGTGATAATGAACTCTCAAGTGGAACAGGTGAT...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTAGAAAAGACTGCCCTTaGCAGTACCCAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPRKDCP*QYPMSS
Trigger: TGAAGACATTGGGTACTGTCAAGGGCAGTCTTTTCT...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp AAATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTTGGGATGCATACATATaGGCTTCCAGGTTCAGATCA +
Preference number: 4 (lower is better)
Translates to: KFESRFQKTHGQCSDATGWDAYI*ASRFRS
Trigger: TGATCTGAACCTGGAAGCTCATATGTATGCATCCCA...ACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAAAGCAGTAAGTCAATaGTGTGGAACACCATGCAGA +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLKAVSQ*CGTPCR
Trigger: TCTGCATGGTGTTCCACATCATTGACTTACTGCTTT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCAGAGCCAAAGCTACATaGAAGATTATGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSRAKAT*KIMFKP
Trigger: GGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347255.6
ENST00000367687.5
CDS-3UTR TCA 90 bp TGGGTCTTCCTGTTGCAGCTGACTCTCTCGCATTGTCTGATATTCTTTCTCATAAGACAGAGGCAAGTTTaGAACATCCTTGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: WVFLLQLTLSHCLIFFLIRQRQV*NILVSV
Trigger: GACTGACACAAGGATGTTTCAAACTTGCCTCTGTCT...TATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTTCTCTAGCTGTTTCCTaGAGACTTCTTTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPSLAVS*RLLLAG
Trigger: CCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGA...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATTCTCTAGCTGTTTCCTaGAGACTTCTTTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDSLAVS*RLLLAG
Trigger: CCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGA...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATATGAAAGTAAACCAATaGTCGCTGATTGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RINTSLGIRLRRKPESGHMKVNQ*SLIGSF
Trigger: GAAAGAACCAATCAGCGATCATTGGTTTACTTTCAT...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATATTCAGCACAATGGCTaGACCTGGGGCTTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDIQHNG*TWGFLG
Trigger: GCCTAAAAAGCCCCAGGTTCAGCCATTGTGCTGAAT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGAGGTATGTACCTGGTaGTTTTTCGAGACGGAATTT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLEVCTW*FFETEF
Trigger: AAATTCCGTCTCGAAAAATCACCAGGTACATACCTC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGCAGAAGACACTGGTTaGATGGCATTCCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDAEDTG*MAFLLV
Trigger: CACTAATAGGAATGCCATTCAACCAGTGTCTTCTGC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGATTCTTGTGCTTTCATaGCACCAGAGTCTTTCGATG +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLILVLS*HQSLSM
Trigger: CATCGAAAGACTCTGGTGTCATGAAAGCACAAGAAT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATGAAAGGAAGTGGGGCTaGCTGAGAAACTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNERKWG*LRNFVP
Trigger: AGGGACAAAGTTTCTCAGTCAGCCCCACTTCCTTTC...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGTGCCAGAAATACTGGTaGATTGGGGTTCCACATGCC +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKCQKYW*IGVPHA
Trigger: GGCATGTGGAACCCCAATGCACCAGTATTTCTGGCA...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGGACTACCATATCCACTaGCACAGTCATGTATACTTG +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLDYHIH*HSHVYL
Trigger: CAAGTATACATGACTGTGGCAGTGGATATGGTAGTC...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGCAGCCTGCCAATAACTaGCATACCTCTGCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKQPANN*HTSALN
Trigger: ATTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTG...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTCTTGCATTTTCCTCTaGCCTGTATCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISISCIFL*PVSLWK
Trigger: CTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAGA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSLILQA*SISLLA
Trigger: TGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR GCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTTTATTCAACACATCTaGCTTGTCTTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSFIQHI*LVFCLI
Trigger: GATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAAGCCTGGTACTCAACTaGGAACAGATCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSLVLN*EQICLY
Trigger: GTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCT...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAGCCTGGTACTCAACTaGGAACAGATCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISISLVLN*EQICLY
Trigger: GTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTCCTCCTTGCTGGCTaGTTGCTGTTTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLLLAG*LLFLQP
Trigger: AGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAAGGCTGGAACTATGTaGTCTCCTTGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVKAGTM*SPWVAG
Trigger: CCCAGCCACCCAAGGAGAGCACATAGTTCCAGCCTT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCAAGCTAGCAAACATATaGACTGCAAAATCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSKLANI*TAKSSL
Trigger: CAAGCTGGATTTTGCAGTGCATATGTTTGCTAGCTT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAACAAATGTTTATTACTaGTTAATGGGGCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELTNVYY*LMGPKG
Trigger: CCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGT...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACTTCCGATGCCACGGGTaGCAACATTCGGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDFRCHG*QHSGRH
Trigger: GTGTCTGCCCGAATGTTGGCACCCGTGGCATCGGAA...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR GCA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTCCATGCTGCTACTCCTaGTTCAGAAATCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPPCCYS*FRNLPL
Trigger: TAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCATGG...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGACTGGAAGATTTCATaGTTGCCATTGCCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSDWKIS*LPLPVK
Trigger: CTTTACGGGCAATGGCAACCATGAAATCTTCCAGTC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGTTGCATCTCCAGCATTaGTATGGCCTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMLHLQH*YGLFPQ
Trigger: CTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAA...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGACTAGTAGGAGTGACTaGTTCCTCCTTGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWTSRSD*FLLVRL
Trigger: GAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGT...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGAACACCATGCAGAGTaGGAACTTGGCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPEHHAE*ELGSKK
Trigger: CTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTC...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGAACACCATGCAGAGTaGGAACTTGGCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLEHHAE*ELGSKK
Trigger: CTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTC...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR CCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGTGCCCTGTATCTCTTTaGAAGCTGAACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLCPVSL*KLNSKE
Trigger: TTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCA...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCCTTGTATCTATCCATTaGGTCTTCCTGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSLVSIH*VFLLQL
Trigger: CAGCTGCAACAGGAAGACCCAATGGATAGATACAAG...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGTCCTTGTGTCAGTCTTaGAACAGTTCACCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLSLCQS*NSSPAK
Trigger: TTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGA...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATGCTGTTTCTCCAGCCTaGTACTCAACTGCGAACAGA +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNAVSPA*YSTANR
Trigger: TCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGGTCCTCTCTGCCTGTaGCTGCTAGTTTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHGPLCL*LLVSKH
Trigger: GTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTTGTGCTCTTGTGCTTaGGTAAGGCTGGAACTATGT +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLLCSCA*VRLELC
Trigger: ACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGAGAGTGGTCATGCCTaGCCCCACAGTGTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHESGHA*PHSVLY
Trigger: ATAAAGCACACTGTGGGGCCAGGCATGACCACTCTC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATCCAATGATCGCTGATTaGTTCTTTCCTTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYPMIAD*FFPLDR
Trigger: CCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGG...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGCTCCTGGGATGTAGATaGCTCTTATTTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLLLGCR*LLFDSS
Trigger: AGAAGAATCAAATAAGAGCCATCTACATCCCAGGAG...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCCTCCTGGGATGTAGATaGCTCTTATTTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSLLGCR*LLFDSS
Trigger: AGAAGAATCAAATAAGAGCCATCTACATCCCAGGAG...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTATCTCAATGTGTATTTaGTTGTGTGGTACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAISMCI*LCGTQV
Trigger: TACCTGGGTACCACACAACCAAATACACATTGAGAT...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCAGAGGAAGAATGTGTTaGGACAGTTCTAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGRGRMC*DSSSSV
Trigger: CACTGAACTAGAACTGTCCCAACACATTCTTCCTCT...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGTACAAGCCAGTCTGTaGTGGGAATTGTCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLVQASL*WELSAN
Trigger: ATTAGCTGACAATTCCCACCACAGACTGGCTTGTAC...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATTCGTCGTGCATGTCCTaGGACTTTTTGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDSSCMS*DFLTGG
Trigger: ACCTCCTGTCAAAAAGTCCCAGGACATGCACGACGA...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGCAAGATACTTCTGGTTaGATTGTCCAACTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWQDTSG*IVQLFC
Trigger: GCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTG...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
3UTR CAA 72 bp GAAAGTAAACCAATGATCGCTGATTGGTTCTTTCCTTaGGACAGGATTAACACTTCCCTGGGAATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ESKPMIADWFFP*DRINTSLGIRL
Trigger: GAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGGTTTACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp AACTTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTaGAAGAGAGTAGTGGTTCTCCCAGCATGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: NFCRLKCPCLTA*KRVVVLPACSL
Trigger: CAAACTACATGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR TCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGTCTGTAATGAAGCTCTaGCCTCCATTTCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMSVMKL*PPFQFC
Trigger: GCAGAACTGAAATGGAGGTCAGAGCTTCATTACAGA...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTATCTCACTGGAACTTTaGCAATCAACAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPISLEL*QSTRRL
Trigger: CAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGAT...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCACAGGAAAGGGGTATTaGCTGGAAGATTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSTGKGY*LEDFMV
Trigger: AACCATGAAATCTTCCAGTCAATACCCCTTTCCTGT...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGAAAGCAGTAAGTCAATaGTGTGGAACACCATGCAGA +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLKAVSQ*CGTPCR
Trigger: TCTGCATGGTGTTCCACATCATTGACTTACTGCTTT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR TCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTAGACAGAGGCAAGTTTaGAACATCCTTGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATARQRQV*NILVSV
Trigger: GACTGACACAAGGATGTTTCAAACTTGCCTCTGTCT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCATGAAAGTAAACCAATaGTCGCTGATTGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSMKVNQ*SLIGSF
Trigger: GAAAGAACCAATCAGCGATCATTGGTTTACTTTCAT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAGTAGTTTGGTTGGTTTaGAAGGATCAGAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGVVWLV*KDQRPP
Trigger: TGGAGGCCTCTGATCCTTTCAAACCAACCAAACTAC...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGAGGTATGTACCTGGTaGTTTTTCGAGACGGAATTT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDEVCTW*FFETEF
Trigger: AAATTCCGTCTCGAAAAATCACCAGGTACATACCTC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTGTATCTATCCAGCATTaGCTGGTTGTCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLVSIQH*LVVMAA
Trigger: GGCTGCCATGACAACCAGGCAATGCTGGATAGATAC...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp AAATTTGAATCTAGGTTCCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTACACAGAGTAGGCCTTaGAGATCTTATAGAGCGATT +
Preference number: 4 (lower is better)
Translates to: KFESRFQKTHGQCSDATGTQSRP*RSYRAI
Trigger: AATCGCTCTATAAGATCTGCAAGGCCTACTCTGTGT...ACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGGAACCTAGATTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR GCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACTCAGAAAAATGGCTATaGAGGTCCGGTAGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNSEKWL*RSGSCS
Trigger: GGAACAGCTACCGGACCTGCATAGCCATTTTTCTGA...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR GCA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACACCTTCAAAATCAGCCTaGAGAAGGTCTTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTPSKSA*RRSSFE
Trigger: CTCAAAGGAAGACCTTCTGCAGGCTGATTTTGAAGG...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTCTTGCATTTTCCTCTaGCCTGTATCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLSCIFL*PVSLWK
Trigger: CTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAGA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGGATTCCCAGTATAAATaGAACAGCTGGAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLDSQYK*NSWSYL
Trigger: TAGGTAACTCCAGCTGTTGCATTTATACTGGGAATC...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR GCA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACACTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 4 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTLVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTTTATTCAACACATCTaGCTTGTCTTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIFIQHI*LVFCLI
Trigger: GATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTTTATTCAACACATCTaGCTTGTCTTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLFIQHI*LVFCLI
Trigger: GATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTCCTTGCTGGCTGCTTaGTGTTTCTCCAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSLLAA*CFSSLV
Trigger: TACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGACTGCAGTGTTTGCATaGCATCATCTTACCCTTTAC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLTAVFA*HHLTLY
Trigger: GTAAAGGGTAAGATGATGGCATGCAAACACTGCAGT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCACTGCAGTGTTTGCATaGCATCATCTTACCCTTTAC +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSTAVFA*HHLTLY
Trigger: GTAAAGGGTAAGATGATGGCATGCAAACACTGCAGT...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATCTGCAGTTTGGTTTGTaGCAGTTCCAGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDLQFGL*QFQFHL
Trigger: GAGATGGAACTGGAACTGGCACAAACCAAACTGCAG...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCTGCAGTTTGGTTTGTaGCAGTTCCAGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVLQFGL*QFQFHL
Trigger: GAGATGGAACTGGAACTGGCACAAACCAAACTGCAG...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGAACTGCAACCTCCCATaGAAAGAAAGCACTCATGCT +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMNCNLP*KESTHA
Trigger: AGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGTTTCTTCCATCATCTTaGCAGCTGGCCTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMFLPSS*QLAFPQ
Trigger: CTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAA...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR GCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAAGGAAGTCTTCATCGTaGAGCTGGCTGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTRKSSS*SWLKTW
Trigger: CCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCT...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR GCA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGATGTTTTGTACAGAGTaGATCCTAGCAAAGGATGAA +
Preference number: 4 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLMFCTE*ILAKDE
Trigger: TTCATCCTTTGCTAGGATGCACTCTGTACAAAACAT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAGCAAACATATGCACTaGAAAATCCAGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISISKHMH*KIQLGF
Trigger: GAAACCAAGCTGGATTTTGCAGTGCATATGTTTGCT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGCAAAAGCAATCGAATaGGAGAAAATGGCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDAKAIE*EKMAKS
Trigger: ACTCTTGGCCATTTTCTCGCATTCGATTGCTTTTGC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGATGGCTTATTTGTTTaGCTGGCTGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSDGLFV*LAGISP
Trigger: TGGAGATATTCCAGCCAGCCAAACAAATAAGCCATC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGGACTGGAAGATTTCATaGTTGCCATTGCCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMDWKIS*LPLPVK
Trigger: CTTTACGGGCAATGGCAACCATGAAATCTTCCAGTC...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTAAGTGCCAGAAATACTaGTGCATTGGGGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATAKCQKY*CIGVPH
Trigger: ATGTGGAACCCCAATGCACCAGTATTTCTGGCACTT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGTCTCCAGCATTGGTATaGCCTTTTCCCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKSPALV*PFPSDC
Trigger: ACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGA...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCGTAATAACACTCTCCTaGGCTGAGTCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSVITLS*AESFVI
Trigger: TATCACAAAGGACTCAGCCCAGGAGAGTGTTATTAC...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACATTCAGATCAGAAAAATaGCTATGCAGGTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTFRSEK*LCRSGS
Trigger: GCTACCGGACCTGCATAGCCATTTTTCTGATCTGAA...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTGCCCTGTATCTCTTTaGAAGCTGAACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISICPVSL*KLNSKE
Trigger: TTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCCTTGTATCTATCCATTaGGTCTTCCTGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVLVSIH*VFLLQL
Trigger: CAGCTGCAACAGGAAGACCCAATGGATAGATACAAG...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGTTCCAACCTCATGCTaGCCTCCTGTAATCTTCGGT +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHVPTSC*PPVIFG
Trigger: ACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAAC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGCTGTTTCTCCAGCCTaGTACTCAACTGCGAACAGA +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHAVSPA*YSTANR
Trigger: TCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AGAGTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCATTCATGCTGTTTCTCCAGCCTaGTACTCAACTGCGAACAGA +
Preference number: 4 (lower is better)
Translates to: RVQGFAKPRVFRSLDFIHAVSPA*YSTANR
Trigger: TCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGC...ATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGGGTCCTCTCTGCCTGTaGCTGCTAGTTTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVGPLCL*LLVSKH
Trigger: GTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACC...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISILPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATCTTGGTGCATCCTCCTaGGATGTAGATGGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDLGASS*DVDGSY
Trigger: ATAAGAGCCATCTACATCCCAGGAGGATGCACCAAG...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATCTTGGTGCATCCTCCTaGGATGTAGATGGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNLGASS*DVDGSY
Trigger: ATAAGAGCCATCTACATCCCAGGAGGATGCACCAAG...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATGCCAACACAGACACTTaGAATGCTGGGTTATGTTCC +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDANTDT*NAGLCS
Trigger: GGAACATAACCCAGCATTCCAAGTGTCTGTGTTGGC...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATACATGGTTCAGGATGTaGGAAGCTAGCAAACATATG +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYTWFRM*EASKHM
Trigger: CATATGTTTGCTAGCTTCCCACATCCTGAACCATGT...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAAAGGAGTCAGTATTTTaGAGTGTTTTTAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELKESVF*SVFKGK
Trigger: CTTGCCCTTAAAAACACTCCAAAATACTGACTCCTT...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR CCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGTGTATTTGGTTGTGTaGTACCCAGGTAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIVYLVV*YPGKQK
Trigger: CTTTTGTTTACCTGGGTACCACACAACCAAATACAC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGTGTATTTGGTTGTGTaGTACCCAGGTAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLVYLVV*YPGKQK
Trigger: CTTTTGTTTACCTGGGTACCACACAACCAAATACAC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCATCGAATGCGAGAAAATaGCCAAGAGTGATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKASNARK*PRVMQE
Trigger: CTCCTGCATCACTCTTGGCCATTTTCTCGCATTCGA...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489615.5
3UTR CAA 72 bp CTGCCTGATCCAAGTCATTCCGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAAGGTCATCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LPDPSHSVEQFC*LLVHGQGHHSL
Trigger: AAGAGAATGATGACCTTGCCCATGAACTAGTAACAAGCAAAATTGCTCTACGGAATGACTTGGATCAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
3UTR CAA 72 bp GTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTaGGATTTCATTCATAAGGGCTCCTCTCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: VQGFAKPRVFRS*DFIHKGSSLMF
Trigger: GAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTTCTGTAATGAAGCTCTaGCCTCCATTTCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVSVMKL*PPFQFC
Trigger: GCAGAACTGAAATGGAGGTCAGAGCTTCATTACAGA...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGACAGGAAAGGGGTATTaGCTGGAAGATTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMTGKGY*LEDFMV
Trigger: AACCATGAAATCTTCCAGTCAATACCCCTTTCCTGT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGAGAAAACATGTATCTaGAATTCTTCCGAACCATGG +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSEKTCI*NSSEPW
Trigger: CCATGGTTCGGAAGAATTTCAGATACATGTTTTCTC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGATCACCTGTTCCACTTaGGAGTTCATTATCACTCTC +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMITCST*EFIITL
Trigger: GAGAGTGATAATGAACTCTCAAGTGGAACAGGTGAT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCGGGAAATGTACGATaGATATCTCGAGTAATAACA +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPAGNVR*ISRVIT
Trigger: TGTTATTACTCGAGATATTCATCGTACATTTCCCGC...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACATGGGATGCATACATATaGGCTTCCAGGTTCAGATCA +
Preference number: 4 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTWDAYI*ASRFRS
Trigger: TGATCTGAACCTGGAAGCTCATATGTATGCATCCCA...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR TCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTTGGGATGCATACATATaGGCTTCCAGGTTCAGATCA +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVWDAYI*ASRFRS
Trigger: TGATCTGAACCTGGAAGCTCATATGTATGCATCCCA...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR TCA 90 bp AGAGTTTTTCGCAGCTTGGATTTCATTCATAAGGGCTCCTCTCTGATGTTCAAGAAAGCAGTAAGTCAATaGTGTGGAACACCATGCAGA +
Preference number: 4 (lower is better)
Translates to: RVFRSLDFIHKGSSLMFKKAVSQ*CGTPCR
Trigger: TCTGCATGGTGTTCCACATCATTGACTTACTGCTTT...CTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGAGAGCCAAAGCTACATaGAAGATTATGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLRAKAT*KIMFKP
Trigger: GGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR TCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCAAGTCTTTGTGGATATaGCATGCACAGCTAAAACAG +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSKSLWI*HAQLKQ
Trigger: CTGTTTTAGCTGTGCATGTCATATCCACAAAGACTT...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGAGACAGAGGCAAGTTTaGAACATCCTTGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMRQRQV*NILVSV
Trigger: GACTGACACAAGGATGTTTCAAACTTGCCTCTGTCT...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAAGACAGAGGCAAGTTTaGAACATCCTTGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTRQRQV*NILVSV
Trigger: GACTGACACAAGGATGTTTCAAACTTGCCTCTGTCT...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTCCAACAATAGACAGTaGAGGACATATTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLSNNRQ*RTYCLE
Trigger: TTCCAAACAATATGTCCTTCACTGTCTATTGTTGGA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAAGGTACCTAAGTGTTTaGTGCAAAGGTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVRYLSV*CKGWWE
Trigger: CTCCCACCAACCTTTGCATCAAACACTTAGGTACCT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR TCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATAGTTCTAGTTCAGTGTaGCTATCAGCATGGCGACGA +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHSSSSV*LSAWRR
Trigger: TCGTCGCCATGCTGATAGTCACACTGAACTAGAACT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTACATCAGTTACACATGTaGTTCTCCTGGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVHQLHM*FSWAVS
Trigger: AGAGACTGCCCAGGAGAATCACATGTGTAACTGATG...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485114.1
CDS-3UTR TCA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGGCTGTTGAGCTCCAGTaGTTCGGAAATCACACAGGT +
Preference number: 4 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLAVELQ*FGNHTG
Trigger: ACCTGTGTGATTTCCGAATCACTGGAGCTCAACAGC...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGGGAAGAACGTTTGAATaGTGTACAGAAACTGTACAA +
Preference number: 4 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLGRTFE*CTETVQ
Trigger: TTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCC...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCGGTTTCCTCGTTAAGTaGCAGAAATACTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVGFLVK*QKYWCI
Trigger: AATGCACCAGTATTTCTGGCACTTAACGAGGAAACC...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTTACCTCTGCCCTCAATaGTTCAGGGACACCACTCTT +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPYLCPQ*FRDTTL
Trigger: AAGAGTGGTGTCCCTGAAGCATTGAGGGCAGAGGTA...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTTGTTCCTCTGGCATATaGAGCAGTAATACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVCSSGI*SSNTAA
Trigger: TGCTGCTGTATTACTGCTGCATATGCCAGAGGAACA...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAAATTCATCCTCTACTaGCCTGTTCTTCTAATCTCT +
Preference number: 4 (lower is better)
Translates to: LLDFPSKGHQEESSQISIKFILY*PVLLIS
Trigger: AGAGATTAGAAGAACAGGGCAGTAGAGGATGAATTT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325589.9
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTTTATTCAACACATCTaGCTTGTCTTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLFIQHI*LVFCLI
Trigger: GATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATTCCATCTCTCTCAGCTaGTTCTTAAGTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDSISLS*FLSESF
Trigger: GAAGGACTCACTTAAGAAGCAGCTGAGAGAGATGGA...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCATCCATCTCTCTCAGCTaGTTCTTAAGTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKASISLS*FLSESF
Trigger: GAAGGACTCACTTAAGAAGCAGCTGAGAGAGATGGA...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTTTCTTCCATCATCTTaGCAGCTGGCCTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLFLPSS*QLAFPQ
Trigger: CTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAA...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR GCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATCCAGCCTTATTCTTGTaGTTTCATGACACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNPALFL*FHDTRV
Trigger: GACTCTGGTGTCATGAAAGCACAAGAATAAGGCTGG...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCTCTACTACCTCCTCTaGAAGGGAAAGGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLYYLL*KGKVGV
Trigger: AACTCCTACCTTTCCCTTGCAGAGGAGGTAGTAGAG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATACAAATGTTTATTACTaGTTAATGGGGCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYTNVYY*LMGPKG
Trigger: CCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGT...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGAAGGAAAAATCCTACTaGAGCTCAGTGCCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMKEKSY*SSVPVY
Trigger: GTACACTGGCACTGAGCTGCAGTAGGATTTTTCCTT...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTAACAAGAAGACTGCTTaGCCTTTTCTCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATANKKTA*PFLGIS
Trigger: AGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCATTTGTTTGGCTGGCTaGAATATCTCCAAACGAATG +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSICLAG*NISKRM
Trigger: CATTCGTTTGGAGATATTCCAGCCAGCCAAACAAAT...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTGACTGGAAGATTTCATaGTTGCCATTGCCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVDWKIS*LPLPVK
Trigger: CTTTACGGGCAATGGCAACCATGAAATCTTCCAGTC...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCGAAAGGGGTATTGACTaGAAGATTTCATGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVERGID*KISWLP
Trigger: TGGCAACCATGAAATCTTCCAGTCAATACCCCTTTC...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGGAAAGGGGTATTGACTaGAAGATTTCATGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMERGID*KISWLP
Trigger: TGGCAACCATGAAATCTTCCAGTCAATACCCCTTTC...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAACCTTCTGGAACATTTaGTACATACAGGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTTFWNI*YIQGNR
Trigger: CCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGT...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGAAGTGCCAGAAATACTaGTGCATTGGGGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKKCQKY*CIGVPH
Trigger: ATGTGGAACCCCAATGCACCAGTATTTCTGGCACTT...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTACTTGCTTATCTTTTaGGGTTTCCTCGTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSYLLIF*GFLVKC
Trigger: GCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp TCCGTAGAGCAATTTTGCTTGTTACTAGTTCATGGGCAAGGTCATCATTCTCTTTTCAGATCAGAAAAATaGCTATGCAGGTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SVEQFCLLLVHGQGHHSLFRSEK*LCRSGS
Trigger: GCTACCGGACCTGCATAGCCATTTTTCTGATCTGAA...AAGAGAATGATGACCTTGCCCATGAACTAGTAACAAGCAAAATTGCTCTACGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVSKSMM*NTMQSG
Trigger: CCCACTCTGCATGGTGTTCCACATCATTGACTTACT...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR CCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTTGCCCTGTATCTCTTTaGAAGCTGAACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPCPVSL*KLNSKE
Trigger: TTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCA...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATCTTGTATCTATCCATTaGGTCTTCCTGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDLVSIH*VFLLQL
Trigger: CAGCTGCAACAGGAAGACCCAATGGATAGATACAAG...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCTTGTATCTATCCATTaGGTCTTCCTGTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVLVSIH*VFLLQL
Trigger: CAGCTGCAACAGGAAGACCCAATGGATAGATACAAG...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTTGTCATTGTACTTATaGCTCGTTTTACATCCCTGC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLLSLYL*LVLHPC
Trigger: GCAGGGATGTAAAACGAGCCATAAGTACAATGACAA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325589.9
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGGTTCCAACCTCATGCTaGCCTCCTGTAATCTTCGGT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVVPTSC*PPVIFG
Trigger: ACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAAC...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATAAGACTTCTTTTAGCTaGGCAGTCTCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNKTSFS*AVSSSC
Trigger: GCAAGAGGAAGAGACTGCCCAGCTAAAAGAAGTCTT...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCACCTGAATTTTACACTTaGCCTCCACCAACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKAPEFYT*PPPTAV
Trigger: AACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGG...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACTTGTGCTCTTGTGCTTaGGTAAGGCTGGAACTATGT +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNLCSCA*VRLELC
Trigger: ACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAA...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGACCAATGATCGCTGATTaGTTCTTTCCTTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGPMIAD*FFPLDR
Trigger: CCTGTCCAAAGGAAAGAACCAATCAGCGATCATTGG...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGAAATACTCTGTCCCTaGTTCTATATTCCACTCTAT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLEILCP*FYIPLY
Trigger: ATAGAGTGGAATATAGAACCAGGGACAGAGTATTTC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAGAGAGTTTAGGCTTATaGTACCAACAGGCATACCCA +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGESLGL*YQQAYP
Trigger: TGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTC...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCAGAGAGTTTAGGCTTATaGTACCAACAGGCATACCCA +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKAESLGL*YQQAYP
Trigger: TGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTC...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATATTCTCCTGGGTGACTaGCTCACTCCTTTAAAGATG +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDILLGD*LTPLKM
Trigger: CATCTTTAAAGGAGTGAGCCAGTCACCCAGGAGAAT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGATCTCAATGTGTATTTaGTTGTGTGGTACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLISMCI*LCGTQV
Trigger: TACCTGGGTACCACACAACCAAATACACATTGAGAT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTACCTCAAGATACTTCTaGTTGGATTGTCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSTSRYF*LDCPTL
Trigger: AAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGT...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTATCTCACTGGAACTTTaGCAATCAACAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATAISLEL*QSTRRL
Trigger: CAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGAT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGTCCAAACGAATGGTCTaGAATCTCACTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKSKRMV*NLTGTL
Trigger: CAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGA...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACGTCTGGAAGAACGTTTaGATGCTGTACAGAAACTGT +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNVWKNV*MLYRNC
Trigger: ACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGAC...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAAAGCAGTAAGTCAATaGTGTGGAACACCATGCAGA +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNKAVSQ*CGTPCR
Trigger: TCTGCATGGTGTTCCACATCATTGACTTACTGCTTT...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR TCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCAGAGCCAAAGCTACATaGAAGATTATGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVRAKAT*KIMFKP
Trigger: GGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCT...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR TCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGAGAGCCAAAGCTACATaGAAGATTATGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWRAKAT*KIMFKP
Trigger: GGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCT...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR TCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTAAGTCTTTGTGGATATaGCATGCACAGCTAAAACAG +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATAKSLWI*HAQLKQ
Trigger: CTGTTTTAGCTGTGCATGTCATATCCACAAAGACTT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp ATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAACTATGAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ISIGLNIVLLCLGKAGTMRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCATCAACCTGGGAAATaGTCCATAAAGTTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMHQPGK*SIKLLL
Trigger: TAGAAGCAACTTTATGGATCATTTCCCAGGTTGATG...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATATGAAAGTAAACCAATaGTCGCTGATTGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYMKVNQ*SLIGSF
Trigger: GAAAGAACCAATCAGCGATCATTGGTTTACTTTCAT...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAGAAAATGGCCAAGAGTaGTGCAGGAGAGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVENGQE*CRRVQI
Trigger: TATCTGAACTCTCCTGCATCACTCTTGGCCATTTTC...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGTCCATATCCAGTAAATaGATGTCACTGTTCTTCACG +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMSISSK*MSLFFT
Trigger: CGTGAAGAACAGTGACATGCATTTACTGGATATGGA...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGGGTTTCCTCGTTAAGTaGCAGAAATACTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKGFLVK*QKYWCI
Trigger: AATGCACCAGTATTTCTGGCACTTAACGAGGAAACC...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCAAAATCGCTCATTTaGAGGGTACACACGGACTAC +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPPKSLI*RVHTDY
Trigger: GTAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGG...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACACACAGAGTAGGCCTTaGAGATCTTATAGAGCGATT +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNTQSRP*RSYRAI
Trigger: AATCGCTCTATAAGATCTGCAAGGCCTACTCTGTGT...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCCTTCAAAATCAGCCTaGAGAAGGTCTTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHPSKSA*RRSSFE
Trigger: CTCAAAGGAAGACCTTCTGCAGGCTGATTTTGAAGG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR GCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACTCTTGCATTTTCCTCTaGCCTGTATCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNSCIFL*PVSLWK
Trigger: CTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAGA...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR GCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCATCTTGCATTTTCCTCTaGCCTGTATCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKASCIFL*PVSLWK
Trigger: CTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAGA...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGATTCCCAGTATAAATaGAACAGCTGGAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: PLSFSQLLMKIPSINATADSQYK*NSWSYL
Trigger: TAGGTAACTCCAGCTGTTGCATTTATACTGGGAATC...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTTGTTCCAACCTCATaGTGGCCTCCTGTAATCTTC +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLVPTS*WPPVIF
Trigger: GAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAAGCCTGGTACTCAACTaGGAACAGATCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGSLVLN*EQICLY
Trigger: GTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCT...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAACTGCAGTGTTTGCATaGCATCATCTTACCCTTTAC +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGTAVFA*HHLTLY
Trigger: GTAAAGGGTAAGATGATGGCATGCAAACACTGCAGT...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTCCATCTCTCTCAGCTaGTTCTTAAGTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHSISLS*FLSESF
Trigger: GAAGGACTCACTTAAGAAGCAGCTGAGAGAGATGGA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGAGTCTAATGTCAAATTaGAGCTGGTTACAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKSLMSN*SWLQGV
Trigger: GACACCCTGTAACCAGCTGCAATTTGACATTAGACT...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGAAGTTGCTTCTAAACTaGAACCTCCCATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMKLLLN*NLPCKE
Trigger: TTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATTACTTCATGCTGGGATaGATGAGTTTTCCAACAATA +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDYFMLG*MSFPTI
Trigger: TATTGTTGGAAAACTCATGCATCCCAGCATGAAGTA...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTAAGGAAAAATCCTACTaGAGCTCAGTGCCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLKEKSY*SSVPVY
Trigger: GTACACTGGCACTGAGCTGCAGTAGGATTTTTCCTT...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGAACAAGAAGACTGCTTaGCCTTTTCTCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKNKKTA*PFLGIS
Trigger: AGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTT...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGGTCTGAAATCTCACTaGAACTTTGACAATCAACAA +
Preference number: 4 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSGLKSH*NFDNQQ
Trigger: TTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACGCTTATTTGTTTGGCTaGCTGGAATATCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNAYLFG*LEYLQT
Trigger: CGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGC...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGGCTTATTTGTTTGGCTaGCTGGAATATCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKAYLFG*LEYLQT
Trigger: CGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGC...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGATGGCTTATTTGTTTaGCTGGCTGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTDGLFV*LAGISP
Trigger: TGGAGATATTCCAGCCAGCCAAACAAATAAGCCATC...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGGATGGCTTATTTGTTTaGCTGGCTGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKDGLFV*LAGISP
Trigger: TGGAGATATTCCAGCCAGCCAAACAAATAAGCCATC...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGACCTTCTGGAACATTTaGTACATACAGGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKTFWNI*YIQGNR
Trigger: CCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGT...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTCTCACAGAACCTTCTaGAACATTTGGTACATACAG +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVSHRTF*NIWYIQ
Trigger: CTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGA...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCAATTCTTCCGAACCATaGGAACTCTCTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVNSSEP*ELSVNA
Trigger: TGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATT...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTACTAGTAGGAGTGACTaGTTCCTCCTTGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPTSRSD*FLLVRL
Trigger: GAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGT...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTTCAGATCAGAAAAATaGCTATGCAGGTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHFRSEK*LCRSGS
Trigger: GCTACCGGACCTGCATAGCCATTTTTCTGATCTGAA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
CDS-3UTR CCA 90 bp CTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACGGGAAGGCTAATAAATTCAGATCAGAAAAATaGCTATGCAGGTCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSNTDCKSQLTSDGKANKFRSEK*LCRSGS
Trigger: GCTACCGGACCTGCATAGCCATTTTTCTGATCTGAA...TTTATTAGCCTTCCCGTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGAACACCATGCAGAGTaGGAACTTGGCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHEHHAE*ELGSKK
Trigger: CTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
CDS-3UTR CCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLSKSMM*NTMQSG
Trigger: CCCACTCTGCATGGTGTTCCACATCATTGACTTACT...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGCTTCAGCTTCTTGGTTaGTACTTTAATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLLQLLG*YFNIAS
Trigger: GCTTGCAATATTAAAGTACCAACCAAGAAGCTGAAG...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATCTTCAGCTTCTTGGTTaGTACTTTAATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: IILEEKIHCEQLGASSWDLQLLG*YFNIAS
Trigger: GCTTGCAATATTAAAGTACCAACCAAGAAGCTGAAG...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACATCCTTGTGTCAGTCTTaGAACAGTTCACCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTSLCQS*NSSPAK
Trigger: TTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGA...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGTCCTTGTGTCAGTCTTaGAACAGTTCACCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMSLCQS*NSSPAK
Trigger: TTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGA...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATAAGACTTCTTTTAGCTaGGCAGTCTCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHKTSFS*AVSSSC
Trigger: GCAAGAGGAAGAGACTGCCCAGCTAAAAGAAGTCTT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTTGTGCTCTTGTGCTTaGGTAAGGCTGGAACTATGT +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLCSCA*VRLELC
Trigger: ACATAGTTCCAGCCTTACCCAAGCACAAGAGCACAA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTTATCACTTCAACCTTaGAATAACAGATGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLSLQP*NNRCLH
Trigger: ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATTATCACTTCAACCTTaGAATAACAGATGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLSLQP*NNRCLH
Trigger: ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTTATCACTTCAACCTTaGAATAACAGATGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGLSLQP*NNRCLH
Trigger: ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAA...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTTCAGCTTCTTGGTTaGTACCATAGACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLQLLG*YHRPGL
Trigger: AAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000469553.6
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGAAGGAGTCAGTATTTTaGAGTGTTTTTAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLKESVF*SVFKGK
Trigger: CTTGCCCTTAAAAACACTCCAAAATACTGACTCCTT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGATGTGGTCTGGCCTTCTaGCTTTCATCATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGCGLAF*LSSSFL
Trigger: AAGAAATGATGATGAAAGCCAGAAGGCCAGACCACA...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATTGTGGTCTGGCCTTCTaGCTTTCATCATCATTTCTT +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDCGLAF*LSSSFL
Trigger: AAGAAATGATGATGAAAGCCAGAAGGCCAGACCACA...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATGATACAAAAGGCTTTTaGGACATCTTGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDDTKGF*DILDLG
Trigger: TCCCAGATCCAAGATGTCCCAAAAGCCTTTTGTATC...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR TCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGATCTCACTGGAACTTTaGCAATCAACAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKISLEL*QSTRRL
Trigger: CAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGAT...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTGAGAAAACATGTATCTaGAATTCTTCCGAACCATGG +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVEKTCI*NSSEPW
Trigger: CCATGGTTCGGAAGAATTTCAGATACATGTTTTCTC...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGGAGAAAACATGTATCTaGAATTCTTCCGAACCATGG +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKEKTCI*NSSEPW
Trigger: CCATGGTTCGGAAGAATTTCAGATACATGTTTTCTC...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTGGGGGTAGGAATAACTaGGTCTTTAACATCAGACAC +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPGGRNN*VFNIRH
Trigger: GTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCC...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTGGGATGCATACATATaGGCTTCCAGGTTCAGATCA +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVWDAYI*ASRFRS
Trigger: TGATCTGAACCTGGAAGCTCATATGTATGCATCCCA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR TCA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACAAAGTCTTTGTGGATATaGCATGCACAGCTAAAACAG +
Preference number: 4 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTKSLWI*HAQLKQ
Trigger: CTGTTTTAGCTGTGCATGTCATATCCACAAAGACTT...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTAAGTCTTTGTGGATATaGCATGCACAGCTAAAACAG +
Preference number: 4 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVKSLWI*HAQLKQ
Trigger: CTGTTTTAGCTGTGCATGTCATATCCACAAAGACTT...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR TCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTCTCTAGCTGTTTCCTaGAGACTTCTTTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSLAVS*RLLLAG
Trigger: CCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR TCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCAAGCATTAAACTAAGATaGTGTGAGCCTGACCTCTAT +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKASIKLR*CEPDLY
Trigger: ATAGAGGTCAGGCTCACATCATCTTAGTTTAATGCT...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGAATCAACAAGAAGACTaGTTGGCCTTTTCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKNQQED*LAFSRN
Trigger: ATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATT...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGATAGATTGGAAAAGATaGTATCTCCACATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMIDWKR*YLHIAG
Trigger: TCCAGCAATGTGGAGATAGCATCTTTTCCAATCTAT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGGGAAGAACGTTTGAATaGTGTACAGAAACTGTACAA +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMGRTFE*CTETVQ
Trigger: TTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCC...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGTTGTTAGAAAGTTGCTaGACTGTAATCACAACCTTC +
Preference number: 4 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWLLESC*TVITTF
Trigger: GAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAA...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAACAGTCATGTATACTTaGTTATCTTTTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTTVMYT*LSFGVS
Trigger: GGAAACCCCAAAAGATAAGCAAGTATACATGACTGT...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTCACCAAAACACAGAATaGTTGTTCCTCTGGCATATG +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLHQNTE*LFLWHM
Trigger: CATATGCCAGAGGAACAAGCATTCTGTGTTTTGGTG...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCCTTCAAAATCAGCCTaGAGAAGGTCTTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVPSKSA*RRSSFE
Trigger: CTCAAAGGAAGACCTTCTGCAGGCTGATTTTGAAGG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNLILQA*SISLLA
Trigger: TGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAA...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR GCA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGGATTCCCAGTATAAATaGAACAGCTGGAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMDSQYK*NSWSYL
Trigger: TAGGTAACTCCAGCTGTTGCATTTATACTGGGAATC...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR GCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACATTTATTCAACACATCTaGCTTGTCTTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTFIQHI*LVFCLI
Trigger: GATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAA...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCATTTATTCAACACATCTaGCTTGTCTTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKAFIQHI*LVFCLI
Trigger: GATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAA...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATACTGCAGTGTTTGCATaGCATCATCTTACCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHTAVFA*HHLTLY
Trigger: GTAAAGGGTAAGATGATGGCATGCAAACACTGCAGT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTCCATCTCTCTCAGCTaGTTCTTAAGTGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSISLS*FLSESF
Trigger: GAAGGACTCACTTAAGAAGCAGCTGAGAGAGATGGA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAACATTGTGCTCTTGTaGTTGGGTAAGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVNIVLL*LGKAGT
Trigger: AGTTCCAGCCTTACCCAAGCACAAGAGCACAATGTT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTGACTCAAAGGCATTaGAGTGAAGGAGAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLTQRH*SEGEFR
Trigger: CCTAAACTCTCCTTCACTGCAATGCCTTTGAGTCAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR GCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATAGCAAACATATGCACTaGAAAATCCAGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDSKHMH*KIQLGF
Trigger: GAAACCAAGCTGGATTTTGCAGTGCATATGTTTGCT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGGGTCTGAAATCTCACTaGAACTTTGACAATCAACAA +
Preference number: 4 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWGLKSH*NFDNQQ
Trigger: TTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACC...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGTCTCACAGAACCTTCTaGAACATTTGGTACATACAG +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKSHRTF*NIWYIQ
Trigger: CTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGA...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCCATAGCTCTTTCCCATaGATTCCATATCCAGTAAAT +
Preference number: 4 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVHSSFP*IPYPVN
Trigger: ATTTACTGGATATGGAATCCATGGGAAAGAGCTATG...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCATAGCTCTTTCCCATaGATTCCATATCCAGTAAAT +
Preference number: 4 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMHSSFP*IPYPVN
Trigger: ATTTACTGGATATGGAATCCATGGGAAAGAGCTATG...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGTACTTGCTTATCTTTTaGGGTTTCCTCGTTAAGTGC +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKYLLIF*GFLVKC
Trigger: GCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTA...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSKSMM*NTMQSG
Trigger: CCCACTCTGCATGGTGTTCCACATCATTGACTTACT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR CCA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACATGCCCTGTATCTCTTTaGAAGCTGAACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTCPVSL*KLNSKE
Trigger: TTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCA...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCCTGAATTTTACACTTaGCCTCCACCAACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVPEFYT*PPPTAV
Trigger: AACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGACTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATCTCCCAGATTTCCATTaGTTTGAACATTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDLPDFH*FEHCAL
Trigger: AAGAGCACAATGTTCAAACCAATGGAAATCTGGGAG...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTATGTCAAATTGCAGCTaGTTACAGGGTGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPMSNCS*LQGVME
Trigger: CTCCATGACACCCTGTAACCAGCTGCAATTTGACAT...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATATTGGTTCTTTCCTTTaGACAGGATTAACACTTCCC +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNIGSFL*TGLTLP
Trigger: GGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAAT...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGTTTTGAAACTTTCCTaGATATTTGGCTGGTTAATC +
Preference number: 4 (lower is better)
Translates to: QEESSQISIGLNIVLLCLVLKLS*IFGWLI
Trigger: GATTAACCAGCCAAATATCCAGGAAAGTTTCAAAAC...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATACATGGTTCAGGATGTaGGAAGCTAGCAAACATATG +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHTWFRM*EASKHM
Trigger: CATATGTTTGCTAGCTTCCCACATCCTGAACCATGT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGATACAAAAGGCTTTTaGGACATCTTGGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHDTKGF*DILDLG
Trigger: TCCCAGATCCAAGATGTCCCAAAAGCCTTTTGTATC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTaGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: TFSTDRGKFETS*CQSWNSSPAKS
Trigger: ACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
3UTR CAA 72 bp TTTATAATTGCCAGAAGTCACATCTGTGTCCATACTTaGGTGTACTTAGGAACTCACAAGTCCTATGTGGCA +
Preference number: 4 (lower is better)
Translates to: FIIARSHICVHT*VYLGTHKSYVA
Trigger: TGCCACATAGGACTTGTGAGTTCCTAAGTACACCAAAGTATGGACACAGATGTGACTTCTGGCAATTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp TCAAGATCAGCATCTCCTATTGAGGTGCAGCCAAGGTaGAAGTCCTCATTTTGGTCACTTTTGAAAGATAAA +
Preference number: 4 (lower is better)
Translates to: SRSASPIEVQPR*KSSFWSLLKDK
Trigger: TTTATCTTTCAAAAGTGACCAAAATGAGGACTTCAACCTTGGCTGCACCTCAATAGGAGATGCTGATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp TCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATaGAAATCTACTAAAGCACAGTCCTGCAGAAGCACA +
Preference number: 4 (lower is better)
Translates to: SGWIVQLFCHRL*KSTKAQSCRST
Trigger: TGTGCTTCTGCAGGACTGTGCTTTAGTAGATTTCAATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGACAGGAAAGGGGTATTaGCTGGAAGATTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLTGKGY*LEDFMV
Trigger: AACCATGAAATCTTCCAGTCAATACCCCTTTCCTGT...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTGTCTGGAAGAACGTTTaGATGCTGTACAGAAACTGT +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPVWKNV*MLYRNC
Trigger: ACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGAC...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACAGAAAAGACTGCCCTTaGCAGTACCCAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDRKDCP*QYPMSS
Trigger: TGAAGACATTGGGTACTGTCAAGGGCAGTCTTTTCT...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR TCA 90 bp CATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACGGGAAGAACCATAGTCGTACATaGTTTTCACCAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: HYDLSNTDCKSQLTSDGKNHSRT*FSPKHR
Trigger: TCTGTGTTTTGGTGAAAATCATGTACGACTATGGTT...CTTCCCGTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR TCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGTCATATTTAACTAGGTaGATAGTCTGTCTCGGTGTA +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKSYLTR*IVCLGV
Trigger: TACACCGAGACAGACTATTCACCTAGTTAAATATGA...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR TCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTCTAAGTTCTCTCTGTaGCCGCAAACATTCAATGGA +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSKFSL*PQTFNG
Trigger: TCCATTGAATGTTTGCGGTCACAGAGAGAACTTAGA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367688.3
CDS-3UTR TCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCATCCAACAATAGACAGTaGAGGACATATTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKASNNRQ*RTYCLE
Trigger: TTCCAAACAATATGTCCTTCACTGTCTATTGTTGGA...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR TCA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATAGTAGGTATCCAGAATaGGAAAGATGGATCTCTTAT +
Preference number: 4 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDSRYPE*ERWISY
Trigger: ATAAGAGATCCATCTTTCTCATTCTGGATACCTACT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR TCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATATATCCAAAAAGATGTaGCAAGAACAGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYISKKM*QEQVPP
Trigger: AGGAGGCACCTGTTCTTGTCACATCTTTTTGGATAT...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTAATCAACAAGAAGACTaGTTGGCCTTTTCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLNQQED*LAFSRN
Trigger: ATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATT...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACAATAGATTGGAAAAGATaGTATCTCCACATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTIDWKR*YLHIAG
Trigger: TCCAGCAATGTGGAGATAGCATCTTTTCCAATCTAT...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGTTGTTAGAAAGTTGCTaGACTGTAATCACAACCTTC +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKLLESC*TVITTF
Trigger: GAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAA...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTCCATATCCAGTAAATaGATGTCACTGTTCTTCACG +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLSISSK*MSLFFT
Trigger: CGTGAAGAACAGTGACATGCATTTACTGGATATGGA...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR GCA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGACAGTCATGTATACTTaGTTATCTTTTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKTVMYT*LSFGVS
Trigger: GGAAACCCCAAAAGATAAGCAAGTATACATGACTGT...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTGACTACCATATCCACTaGCACAGTCATGTATACTTG +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPDYHIH*HSHVYL
Trigger: CAAGTATACATGACTGTGGCAGTGGATATGGTAGTC...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR GCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLILQA*SISLLA
Trigger: TGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR GCA 90 bp AGAGTTCAGGGTTTTGCTAAACCAAGAGTTTTTCGCAGCTTGGATTTCATTCATGATTCCCAGTATAAATaGAACAGCTGGAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: RVQGFAKPRVFRSLDFIHDSQYK*NSWSYL
Trigger: TAGGTAACTCCAGCTGTTGCATTTATACTGGGAATC...ATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR GCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTATTTATTCAACACATCTaGCTTGTCTTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVFIQHI*LVFCLI
Trigger: GATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAA...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAGCCTGGTACTCAACTaGGAACAGATCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSLVLN*EQICLY
Trigger: GTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGACTGCAGTGTTTGCATaGCATCATCTTACCCTTTAC +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVTAVFA*HHLTLY
Trigger: GTAAAGGGTAAGATGATGGCATGCAAACACTGCAGT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAAAGCTAGCAAACATATaGACTGCAAAATCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVKLANI*TAKSSL
Trigger: CAAGCTGGATTTTGCAGTGCATATGTTTGCTAGCTT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGGGTCTGAAATCTCACTaGAACTTTGACAATCAACAA +
Preference number: 4 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKGLKSH*NFDNQQ
Trigger: TTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACC...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGGAAAGGGGTATTGACTaGAAGATTTCATGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLERGID*KISWLP
Trigger: TGGCAACCATGAAATCTTCCAGTCAATACCCCTTTC...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDSKSMM*NTMQSG
Trigger: CCCACTCTGCATGGTGTTCCACATCATTGACTTACT...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTGCCCTGTATCTCTTTaGAAGCTGAACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHCPVSL*KLNSKE
Trigger: TTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR CCA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCTTCAGCTTCTTGGTTaGTACTTTAATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMLQLLG*YFNIAS
Trigger: GCTTGCAATATTAAAGTACCAACCAAGAAGCTGAAG...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAATTGGTTCTTTCCTTTaGACAGGATTAACACTTCCC +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVIGSFL*TGLTLP
Trigger: GGGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAAT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAAACCAAATTTTGACATaGTTCAGGATGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVNQILT*FRMWEA
Trigger: AGCTTCCCACATCCTGAACCATGTCAAAATTTGGTT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCAAAGGAGTCAGTATTTTaGAGTGTTTTTAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKAKESVF*SVFKGK
Trigger: CTTGCCCTTAAAAACACTCCAAAATACTGACTCCTT...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000489615.5
3UTR CAA 72 bp AAAGATGTAACTCTATCTCCTCTGCCCAAATCTGTATaGTTTTCCGTTGGTTTTCTCACTTCAGCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: KDVTLSPLPKSV*FSVGFLTSARK
Trigger: TTTCCTAGCTGAAGTGAGAAAACCAACGGAAAACAATACAGATTTGGGCAGAGGAGATAGAGTTACATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp ATATACAAACTTGTATCTATCCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCATTGTCTGATATTCTTT +
Preference number: 4 (lower is better)
Translates to: IYKLVSIHWVFL*QLTLSHCLIFF
Trigger: AAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGTTTGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR TCA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTAACCATAGTCGTACATaGTTTTCACCAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLNHSRT*FSPKHR
Trigger: TCTGTGTTTTGGTGAAAATCATGTACGACTATGGTT...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR TCA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACAAAGCAGTAAGTCAATaGTGTGGAACACCATGCAGA +
Preference number: 4 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDKAVSQ*CGTPCR
Trigger: TCTGCATGGTGTTCCACATCATTGACTTACTGCTTT...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR TCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAGAGCCAAAGCTACATaGAAGATTATGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVRAKAT*KIMFKP
Trigger: GGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR TCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAGATTTCCATTGGTTTaGACATTGTGCTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVRFPLV*TLCSCA
Trigger: AGCACAAGAGCACAATGTTCAAACCAATGGAAATCT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR GCA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACCACCAAAACACAGAATaGTTGTTCCTCTGGCATATG +
Preference number: 4 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDHQNTE*LFLWHM
Trigger: CATATGCCAGAGGAACAAGCATTCTGTGTTTTGGTG...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR GCA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTATACTTCATGCTGGGATaGATGAGTTTTCCAACAATA +
Preference number: 4 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVYFMLG*MSFPTI
Trigger: TATTGTTGGAAAACTCATGCATCCCAGCATGAAGTA...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTATTTGTTTGGCTGGCTaGAATATCTCCAAACGAATG +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPICLAG*NISKRM
Trigger: CATTCGTTTGGAGATATTCCAGCCAGCCAAACAAAT...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATATTTGTTTGGCTGGCTaGAATATCTCCAAACGAATG +
Preference number: 4 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYICLAG*NISKRM
Trigger: CATTCGTTTGGAGATATTCCAGCCAGCCAAACAAAT...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGTCTCACAGAACCTTCTaGAACATTTGGTACATACAG +
Preference number: 4 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLSHRTF*NIWYIQ
Trigger: CTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGA...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTAATTCTTCCGAACCATaGGAACTCTCTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPNSSEP*ELSVNA
Trigger: TGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATT...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATAATTCTTCCGAACCATaGGAACTCTCTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYNSSEP*ELSVNA
Trigger: TGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATT...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTGCCCTGTATCTCTTTaGAAGCTGAACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVCPVSL*KLNSKE
Trigger: TTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCTTCAGCTTCTTGGTTaGTACTTTAATATTGCAAGC +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLQLLG*YFNIAS
Trigger: GCTTGCAATATTAAAGTACCAACCAAGAAGCTGAAG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR CCA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGAAATACTCTGTCCCTaGTTCTATATTCCACTCTAT +
Preference number: 4 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHEILCP*FYIPLY
Trigger: ATAGAGTGGAATATAGAACCAGGGACAGAGTATTTC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATGTTTTGAAACTTTCCTaGATATTTGGCTGGTTAATC +
Preference number: 4 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNVLKLS*IFGWLI
Trigger: GATTAACCAGCCAAATATCCAGGAAAGTTTCAAAAC...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCTGCTTTGCATAGAATaGTTACACTGGCTAGTAGAA +
Preference number: 4 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLLLCIE*LHWLVE
Trigger: TTCTACTAGCCAGTGTAACCATTCTATGCAAAGCAG...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR TCA 90 bp GATGTTACCATTTACTTCCCCGAACATCATGATGCTATGATTACAATCTATGTTGCGGGAAATGTACGATaGATATCTCGAGTAATAACA +
Preference number: 4 (lower is better)
Translates to: DVTIYFPEHHDAMITIYVAGNVR*ISRVIT
Trigger: TGTTATTACTCGAGATATTCATCGTACATTTCCCGC...AACATAGATTGTAATCATAGCATCATGATGTTCGGGGAAGTAAATGGTAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR TCA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGATCAAGAAGTATCTCTaGATGCCTTTAACACCAGAT +
Preference number: 4 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLIKKYL*MPLTPD
Trigger: ATCTGGTGTTAAAGGCATTCAGAGATACTTCTTGAT...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATATAGATTGGAAAAGATaGTATCTCCACATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYIDWKR*YLHIAG
Trigger: TCCAGCAATGTGGAGATAGCATCTTTTCCAATCTAT...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR GCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGATGTTTTGTACAGAGTaGATCCTAGCAAAGGATGAA +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVMFCTE*ILAKDE
Trigger: TTCATCCTTTGCTAGGATGCACTCTGTACAAAACAT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CCA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATGCACATGTAGATATCTaGAATGGAGATACACCAAAA +
Preference number: 4 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYAHVDI*NGDTPK
Trigger: TTTTGGTGTATCTCCATTCCAGATATCTACATGTGC...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CCA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTTATCACTTCAACCTTaGAATAACAGATGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLSLQP*NNRCLH
Trigger: ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
3UTR CAA 72 bp TACATACTATTAAATATCCCCACATCCATACAAAGGTaGCTTTTCTACTTTACTCAGGACATTTCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: YILLNIPTSIQR*LFYFTQDISES
Trigger: GCTTTCTGAAATGTCCTGAGTAAAGTAGAAAAGCAACCTTTGTATGGATGTGGGGATATTTAATAGTATGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS TCA 90 bp CCGTTCGCTCCGCCACCGCTGGAGCCCGAGGAGGGCGGAGGGAACTaGGAGGGGAGGGGAGAAGGGCCGCCTGGCAGGAAGAGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: PFAPPPLEPEEGGGN*EGRGEGPPGRKRRG
Trigger: CCCTCGCCTCTTCCTGCCAGGCGGCCCTTCTCCCCTCCCCTCTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGAGCGAACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS TCA 90 bp AACAACTCCTTCAGGCGCCCGCGTTCCACCCTCCACCTCGCGCTCTaGAGCCGGGCCGGTCCCGTTCGCTCCGCCACCGCTGGAGCCCGA +
Preference number: 5 (lower is better)
Translates to: NNSFRRPRSTLHLAL*SRAGPVRSATAGAR
Trigger: TCGGGCTCCAGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGAGGTGGAGGGTGGAACGCGGGCGCCTGAAGGAGTTGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000681986.1
CDS-3UTR CAA 90 bp ACTGGGTGGAGCCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCATCATCTCACTGGGGCTaGTCACACAGTGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: TGWSPPKLKEACLPSWTPSSHWG*SHSGCS
Trigger: GCTGCACCCACTGTGTGACAAGCCCCAGTGAGATGA...TGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGGCTCCACCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp CCTGGCTCGGAGAGTCCCACACCCACGGAGCCTCACTCACTGCTAACACAGCAGAGAAATACTGGTGCATaGGGGTTCCACATGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PGSESPTPTEPHSLLTQQRNTGA*GFHMPV
Trigger: CACTGGCATGTGGAACCCCAATGCACCAGTATTTCT...CTGCTGTGTTAGCAGTGAGTGAGGCTCCGTGGGTGTGGGACTCTCCGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS TCA 90 bp TCCCAGGAGGGGCCAACCGACACCTCATACAGCCAGGTGCCCTTCTaGGATGAAGCTTCCAGAGGAAGGATCAGGCAGCAACATTTGCCA +
Preference number: 5 (lower is better)
Translates to: SQEGPTDTSYSQVPF*DEASRGRIRQQHLP
Trigger: TGGCAAATGTTGCTGCCTGATCCTTCCTCTGGAAGCTTCATCTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCCCTCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS CCA 90 bp CACGCATACTCATTCACCAGCTTGCTCCTCTCGTCGTGCATGTCCTaGGACTTTTTGACAGGAGGTGTGAGCTTAGCAGCTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: HAYSFTSLLLSSCMS*DFLTGGVSLAAGAG
Trigger: CCCAGCCCCAGCTGCTAAGCTCACACCTCCTGTCAAAAAGTCCCAGGACATGCACGACGAGAGGAGCAAGCTGGTGAATGAGTATGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp CACCTCCCAGGAGGGGCCAACCGACACCTCATACAGCCAGGTGCCCTTCTGAGAACCAAAATCGCTCATTaGCAGGGTACACACGGACTA +
Preference number: 5 (lower is better)
Translates to: HLPGGANRHLIQPGALLRTKIAH*QGTHGL
Trigger: TAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGGT...TCTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCCCTCCTGGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS TCA 90 bp GGAGGGGCCAACCGACACCTCATACAGCCAGGTGCCCTTCTGAGATaGAGCTTCCAGAGGAAGGATCAGGCAGCAACATTTGCCATTCTG +
Preference number: 5 (lower is better)
Translates to: GGANRHLIQPGALLR*SFQRKDQAATFAIL
Trigger: CAGAATGGCAAATGTTGCTGCCTGATCCTTCCTCTGGAAGCTTCATCTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS GCA 90 bp AGGTCTTCCTTTGAGGTCGCCAGAAGCCGAGGCACAAACAGACGATaGCCCATCCCCAGAAGTTCCAGCACTCGACACGCATACTCATTC +
Preference number: 5 (lower is better)
Translates to: RSSFEVARSRGTNRR*PIPRSSSTRHAYSF
Trigger: GAATGAGTATGCGTGTCGAGTGCTGGAACTTCTGGGGATGGGGCATCGTCTGTTTGTGCCTCGGCTTCTGGCGACCTCAAAGGAAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCACCAAAGCTCAAGGAGGCCTGCCTGCCTTCCTGGACTCCAGTACTGGGGGCTCACCACCTCATATATaGCATCTCCAGCATTGGTAT +
Preference number: 5 (lower is better)
Translates to: PTKAQGGLPAFLDSSTGGSPPHI*HLQHWY
Trigger: ATACCAATGCTGGAGATGCAATATATGAGGTGGTGA...GCCCCCAGTACTGGAGTCCAGGAAGGCAGGCAGGCCTCCTTGAGCTTTGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp GCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGTCCAGCATTGCCTGGTaGTCATGGCAGCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: ALLTWEVQGVGEFPFLAKSSIAW*SWQPAN
Trigger: ATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGA...CTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp GGCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGGTATCTATCCAGCATaGCCTGGTTGTCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: GIAHLGSARGWGIPFPSQGIYPA*PGCHGS
Trigger: GCTGCCATGACAACCAGGCAATGCTGGATAGATACC...TTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTAACTATGTGCTCTCCTaGGGTGGCTGGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: DRINTSLGIRLRRKPESGNYVLS*GGWVTG
Trigger: ACCGGTCACCCAGCCACCCAAGGAGAGCACATAGTT...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS GCA 90 bp AGCACTCGACACGCATACTCATTCACCAGCTTGCTCCTCTCGTCGTaGATGTCCTGGGACTTTTTGACAGGAGGTGTGAGCTTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: STRHAYSFTSLLLSS*MSWDFLTGGVSLAA
Trigger: AGCTGCTAAGCTCACACCTCCTGTCAAAAAGTCCCAGGACATGCACGACGAGAGGAGCAAGCTGGTGAATGAGTATGCGTGTCGAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp CAAGCCGCAAGTGTCAGCAAGGCTGAGGGAGGGGCATCCGCCATTGCTGAAGCTATCAGGCAGCAACATTaGCCATTCTGCAATATTTGC +
Preference number: 5 (lower is better)
Translates to: QAASVSKAEGGASAIAEAIRQQH*PFCNIC
Trigger: GCAAATATTGCAGAATGGCAAATGTTGCTGCCTGAT...AGCTTCAGCAATGGCGGATGCCCCTCCCTCAGCCTTGCTGACACTTGCGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGTCCACTGTGAGCAACTaGGTGCATCCTCCTGGGATG +
Preference number: 5 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVSTVSN*VHPPGM
Trigger: CATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGA...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS GCA 90 bp TATCTATCCAGCATTGCCTGGTTGTCATGGCAGCCTGCCAATAACTaGCATACCTCTGCCCTCAATGCTTCAGGGACACCACTCTTCACC +
Preference number: 5 (lower is better)
Translates to: YLSSIAWLSWQPANN*HTSALNASGTPLFT
Trigger: GGTGAAGAGTGGTGTCCCTGAAGCATTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000526253.1
ENST00000681986.1
CDS GCA 90 bp CTGCTGTCCCAGCTCCAGACCAGACTATCCAAGGAAAAATCCTACTaGAGCTCAGTGCCAGTGTACACACCCACCAGGAGAAGAGTATCA +
Preference number: 5 (lower is better)
Translates to: LLSQLQTRLSKEKSY*SSVPVYTPTRRRVS
Trigger: TGATACTCTTCTCCTGGTGGGTGTGTACACTGGCACTGAGCTGCAGTAGGATTTTTCCTTGGATAGTCTGGTCTGGAGCTGGGACAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465412.5
ENST00000478442.5
CDS CCA 90 bp AATATTAAGAACTGCGGTGGGAGGGGAGCCAGGTTTAGGTCTCCCTaGGAGGACGTACAAGCCAGTCTGTGGTGGGAATTGTCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: NIKNCGGRGARFRSP*EDVQASLWWELSAN
Trigger: ATTAGCTGACAATTCCCACCACAGACTGGCTTGTACGTCCTCCCAGGGAGACCTAAACCTGGCTCCCCTCCCACCGCAGTTCTTAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp GCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAAGATTGCATCTCCAGCATaGGTATGGCCTTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: ALLTWEVQGVGEFPFLAKIASPA*VWPFPS
Trigger: TGAGGGAAAAGGCCATACCAATGCTGGAGATGCAAT...CTTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp GGAGATTTCTTCCATCATCTTGCCAGCTGGCCTTTCCACAGCAGCAGCTGCTGTGCAGAAGGTCTTCCTTaGAGGTCTTTAGGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GDFFHHLASWPFHSSSCCAEGLP*RSLGEP
Trigger: TGGCTCTCCTAAAGACCTCAAAGGAAGACCTTCTGC...ACAGCAGCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCCTCCTTGCTGGCTGCTaGCTGTTTCTCCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSLLAGC*LFLQPG
Trigger: ACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAG...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTCTCCTTGCTGGCTGCTaGCTGTTTCTCCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCALLAGC*LFLQPG
Trigger: ACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAG...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAGGAAGTCTTCATCGTGCAGCTGGCTGAAAACATGGGCGTCATAGGCTACCATGTGCCCGTGGCCGTTTaGATAGAGTTCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: EEVFIVQLAENMGVIGYHVPVAV*IEFRVL
Trigger: CAAAACCCTGAACTCTATCAAAACGGCCACGGGCAC...ATGGTAGCCTATGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp CTCCTCCTTGCTGGCTGCTTGCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAATTTCTTCCATCATCTaGCCAGCTGGCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: LLLAGCLLFLQPGTQLRTISSII*PAGLST
Trigger: TGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAAT...TGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTTACTCATTCACCAGCTaGCTCCTCTCGTCGTGCATG +
Preference number: 5 (lower is better)
Translates to: DRINTSLGIRLRRKPESGYSFTS*LLSSCM
Trigger: CATGCACGACGAGAGGAGCAAGCTGGTGAATGAGTA...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp TGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCACCCTCAAGATGGCTTATTTGTTaGGCTGGCTGGAATATCTCC +
Preference number: 5 (lower is better)
Translates to: CGTSQSLCHRCSRGPSPSRWLIC*AGWNIS
Trigger: GGAGATATTCCAGCCAGCCAAACAAATAAGCCATCT...TGAGGGTGATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp TGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCACCCTCAATTTCATGGTTGCCATaGCCCGTAAAGCCTCTACTT +
Preference number: 5 (lower is better)
Translates to: CGTSQSLCHRCSRGPSPSISWLP*PVKPLL
Trigger: AAGTAGAGGCTTTACGGGCAATGGCAACCATGAAAT...TGAGGGTGATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCTCCTTGCTGGCTGCTaGCTGTTTCTCCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISILLAGC*LFLQPG
Trigger: ACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTCCTTGCTGGCTGCTaGCTGTTTCTCCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLLAGC*LFLQPG
Trigger: ACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAACTATGTGCTCTCCTaGGGTGGCTGGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISINYVLS*GGWVTG
Trigger: ACCGGTCACCCAGCCACCCAAGGAGAGCACATAGTT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTATCCACTGTGAGCAACTaGGTGCATCCTCCTGGGATG +
Preference number: 5 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELSTVSN*VHPPGM
Trigger: CATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGA...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS TCA 90 bp ACATTTGCCATTCTGCAATATTTGCTGTTCTGCAGCTTCCACTGGTaGTACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: TFAILQYLLFCSFHW*YPGKQGLEWTSSKL
Trigger: GAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCACCAGTGGAAGCTGCAGAACAGCAAATATTGCAGAATGGCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS TCA 90 bp CTTCCCTCTTTAGACACCTACGGATCCCCTGGCAGTTCATATCAATaGGCTCCTACTAGCATCTTCTGCTCTCACATTCCACGAACCTCC +
Preference number: 5 (lower is better)
Translates to: LPSLDTYGSPGSSYQ*APTSIFCSHIPRTS
Trigger: GGAGGTTCGTGGAATGTGAGAGCAGAAGATGCTAGTAGGAGCTCATTGATATGAACTGCCAGGGGATCCGTAGGTGTCTAAAGAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529145.6
CDS GCA 90 bp TCCAGAGGAAGGATCAGGCAGCAACATTTGCCATTCTGCAATATTTaGTGTTCTGCAGCTTCCACTGGTGATACCCAGGCAAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: SRGRIRQQHLPFCNI*CSAASTGDTQANRV
Trigger: GACCCTGTTTGCCTGGGTATCACCAGTGGAAGCTGCAGAACAGCAAATATTGCAGAATGGCAAATGTTGCTGCCTGATCCTTCCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS GCA 90 bp CTGCTGTCCCAGCTCCAGACCAGACTATCCAAGGAAAAATCCTACTaGAGCTCAGTGCCAGTGTACACACCCACTTTAATATTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: LLSQLQTRLSKEKSY*SSVPVYTPTLILQA
Trigger: GGCTTGCAATATTAAAGTGGGTGTGTACACTGGCACTGAGCTGCAGTAGGATTTTTCCTTGGATAGTCTGGTCTGGAGCTGGGACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS CCA 90 bp GGAGCCAGGTTTAGGTCTCCCTGGGAGGACGTACAAGCCAGTCTGTaGTGGGAATTGTCAGCTAATGTCTCCACAAGAAAAACATTTTGG +
Preference number: 5 (lower is better)
Translates to: GARFRSPWEDVQASL*WELSANVSTRKTFW
Trigger: CCAAAATGTTTTTCTTGTGGAGACATTAGCTGACAATTCCCACCACAGACTGGCTTGTACGTCCTCCCAGGGAGACCTAAACCTGGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp ACCCTTCTGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCCTCCACATTGCTGGATaGGTCTATAATTCTCACAGA +
Preference number: 5 (lower is better)
Translates to: TLLWDLPILVSQVFKRAILHIAG*VYNSHR
Trigger: TCTGTGAGAATTATAGACCAATCCAGCAATGTGGAG...GATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACAGAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp TGTGGGACCTCCCAATCCTTGTGTCACAGGTGTTCAAGAGGGCCATCACCCTCAGTAAATGCAAAGCAATaGCTCTCTGTTGTTCCGTCA +
Preference number: 5 (lower is better)
Translates to: CGTSQSLCHRCSRGPSPSVNAKQ*LSVVPS
Trigger: TGACGGAACAACAGAGAGCAATTGCTTTGCATTTAC...TGAGGGTGATGGCCCTCTTGAACACCTGTGACACAAGGATTGGGAGGTCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp GGCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAACATCACCTGTTCCACTaGAGAGTTCATTATCACTCT +
Preference number: 5 (lower is better)
Translates to: GIAHLGSARGWGIPFPSQHHLFH*RVHYHS
Trigger: AGAGTGATAATGAACTCTCAAGTGGAACAGGTGATG...TTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp CTCCTCCTTGCTGGCTGCTTGCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LLLAGCLLFLQPGTQLRTADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...TGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGTGCCCGTGGCCGTTTaGATAGAGTTCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSVPVAV*IEFRVL
Trigger: CAAAACCCTGAACTCTATCAAAACGGCCACGGGCAC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTGTGCCCGTGGCCGTTTaGATAGAGTTCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAVPVAV*IEFRVL
Trigger: CAAAACCCTGAACTCTATCAAAACGGCCACGGGCAC...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATAACTATGTGCTCTCCTaGGGTGGCTGGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: IILEEKIHCEQLGASSWDNYVLS*GGWVTG
Trigger: ACCGGTCACCCAGCCACCCAAGGAGAGCACATAGTT...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATG +
Preference number: 5 (lower is better)
Translates to: DRINTSLGIRLRRKPESGIVLLC*GKAGTM
Trigger: CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAAT...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS TCA 90 bp GGGTGCCAACATTCGGGCAGACACTTTAGAAAGTCACCATCCCAGTaGACTGAAGGGCAGAGATACCACTCTCACAAAGCAGTAAGTCAA +
Preference number: 5 (lower is better)
Translates to: GCQHSGRHFRKSPSQ*TEGQRYHSHKAVSQ
Trigger: TTGACTTACTGCTTTGTGAGAGTGGTATCTCTGCCCTTCAGTTCACTGGGATGGTGACTTTCTAAAGTGTCTGCCCGAATGTTGGCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS CCA 90 bp GCCAGGTTTAGGTCTCCCTGGGAGGACGTACAAGCCAGTCTGTGGTaGGAATTGTCAGCTAATGTCTCCACAAGAAAAACATTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: ARFRSPWEDVQASLW*ELSANVSTRKTFWL
Trigger: TAGCCAAAATGTTTTTCTTGTGGAGACATTAGCTGACAATTCCCACCACAGACTGGCTTGTACGTCCTCCCAGGGAGACCTAAACCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGAGCAATTGCTCTCTGTaGTTCCGTCATGTCCACGTG +
Preference number: 5 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWSNCSL*FRHVHV
Trigger: CACGTGGACATGACGGAACAACAGAGAGCAATTGCT...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp GGCATTGCTCACCTGGGAAGTGCAAGGGGTTGGGGAATTCCCTTTCCTAGCCAACACAGTCATGTATACTaGCTTATCTTTTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GIAHLGSARGWGIPFPSQHSHVY*LIFWGF
Trigger: GAAACCCCAAAAGATAAGCAAGTATACATGACTGTG...TTGGCTAGGAAAGGGAATTCCCCAACCCCTTGCACTTCCCAGGTGAGCAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTCCAGCATTGCCTGGTaGTCATGGCAGCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSSSIAW*SWQPAN
Trigger: ATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGCAGAAGGTCTTCCTTaGAGGTCTTTAGGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSAEGLP*RSLGEP
Trigger: TGGCTCTCCTAAAGACCTCAAAGGAAGACCTTCTGC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347255.6
ENST00000367687.5
CDS-3UTR CAA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp CTCCTCCTTGCTGGCTGCTTGCTGTTTCTCCAGCCTGGTACTCAACTGCGAACAAAGTTTGAAACATCCTaGTGTCAGTCTTGGAACAGT +
Preference number: 5 (lower is better)
Translates to: LLLAGCLLFLQPGTQLRTKFETS*CQSWNS
Trigger: ACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT...TGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCCTCCTTGCTGGCTGCTaGCTGTTTCTCCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVLLAGC*LFLQPG
Trigger: ACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAG...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAGTGCCCGTGGCCGTTTaGATAGAGTTCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGVPVAV*IEFRVL
Trigger: CAAAACCCTGAACTCTATCAAAACGGCCACGGGCAC...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTAACTATGTGCTCTCCTaGGGTGGCTGGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: PLSFSQLLMKIPSINATANYVLS*GGWVTG
Trigger: ACCGGTCACCCAGCCACCCAAGGAGAGCACATAGTT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATAGCCAACACAGACACTaGGAATGCTGGGTTATGTTC +
Preference number: 5 (lower is better)
Translates to: RINTSLGIRLRRKPESGHSQHRH*ECWVMF
Trigger: GAACATAACCCAGCATTCCAAGTGTCTGTGTTGGCT...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGTCCAGCATTGCCTGGTaGTCATGGCAGCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMSSIAW*SWQPAN
Trigger: ATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGA...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATTCTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RINTSLGIRLRRKPESGHSCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGA...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAAAGGTCATCATTCTCTaGTTCCAACCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELKVIIL*FQPHAG
Trigger: GCCAGCATGAGGTTGGAACAAGAGAATGATGACCTT...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTCCACCAGCCTCTGTTaGGTCAAAAGGAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSSTSLC*VKRSSL
Trigger: TAAAGAGCTCCTTTTGACCAAACAGAGGCTGGTGGA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCTTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSFKAPS*LKMSLQ
Trigger: CTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAA...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTATTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELFKAPS*LKMSLQ
Trigger: CTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAA...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGAGAGTTTTTCGCAGCTaGGATTTCATTCATAAGGGC +
Preference number: 5 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVRVFRS*DFIHKG
Trigger: GCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGTGCCCGTGGCCGTTTaGATAGAGTTCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLVPVAV*IEFRVL
Trigger: CAAAACCCTGAACTCTATCAAAACGGCCACGGGCAC...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATAACTATGTGCTCTCCTaGGGTGGCTGGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDNYVLS*GGWVTG
Trigger: ACCGGTCACCCAGCCACCCAAGGAGAGCACATAGTT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GGGCAGGGCATAGTTGAACAAACGGCAGCAGAAACTTCTGCAGACTTAAATGTCGCCATTCTGCAATATTaGCTGTTCTGCAGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GQGIVEQTAAETSADLNVAILQY*LFCSFH
Trigger: GTGGAAGCTGCAGAACAGCAAATATTGCAGAATGGC...GACATTTAAGTCTGCAGAAGTTTCTGCTGCCGTTTGTTCAACTATGCCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGATTTCTTCCATCATCTaGCCAGCTGGCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLISSII*PAGLST
Trigger: TGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAAT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392064.6
CDS-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGAGTAGTTTGGTTGGTTaGAAAGGATCAGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLSSLVG*KGSEAS
Trigger: GGAGGCCTCTGATCCTTTCAAACCAACCAAACTACT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAAAACCCATGGACAATGTTCCGATGCCACGGGTGCCAACATTCGGGCAGACACTCTGTAGCACAAATGTaGCTAGTTTTCTTAACTGAC +
Preference number: 5 (lower is better)
Translates to: ENPWTMFRCHGCQHSGRHSVAQM*LVFLTD
Trigger: GTCAGTTAAGAAAACTAGCAACATTTGTGCTACAGA...GTGTCTGCCCGAATGTTGGCACCCGTGGCATCGGAACATTGTCCATGGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CAA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAGCAGAAGGTCTTCCTTaGAGGTCGCCAGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGAEGLP*RSPEAE
Trigger: CTCGGCTTCTGGCGACCTCAAAGGAAGACCTTCTGC...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAGGCTGGAGAATCACTaGAACCCAAGAGGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPRLENH*NPRGVG
Trigger: ACCTACACCTCTTGGGTTCAAGTGATTCTCCAGCCT...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS GCA 90 bp CCTTCTGAGATGAAGCTTCCAGAGGAAGGATCAGGCAGCAACATTTaGCATTCTGCAATATTTGCTGTTCTGCAGCTTCCACTGGTGATA +
Preference number: 5 (lower is better)
Translates to: PSEMKLPEEGSGSNI*HSAIFAVLQLPLVI
Trigger: TATCACCAGTGGAAGCTGCAGAACAGCAAATATTGCAGAATGGCAAATGTTGCTGCCTGATCCTTCCTCTGGAAGCTTCATCTCAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTAGAAATACTGGTGCATaGGGGTTCCACATGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPRNTGA*GFHMPV
Trigger: CACTGGCATGTGGAACCCCAATGCACCAGTATTTCT...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGGTGACTGGTTCCTCCTaGTCAGACTCTCGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMVTGSS*SDSRCR
Trigger: TCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCAC...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGCAGAAGGTCTTCCTTaGAGGTCTTTAGGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLAEGLP*RSLGEP
Trigger: TGGCTCTCCTAAAGACCTCAAAGGAAGACCTTCTGC...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
CDS-3UTR CAA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: PLSFSQLLMKIPSINATAHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGTCTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLSCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGA...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTTCGGTTCTCCCTCTaGTATCTATCCATTGGGTCT +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLRFSL*YLSIGS
Trigger: AGACCCAATGGATAGATACAAGAGGGAGAACCGAAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACTTCGGTTCTCCCTCTaGTATCTATCCATTGGGTCT +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLRFSL*YLSIGS
Trigger: AGACCCAATGGATAGATACAAGAGGGAGAACCGAAG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAAGGTCATCATTCTCTaGTTCCAACCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIKVIIL*FQPHAG
Trigger: GCCAGCATGAGGTTGGAACAAGAGAATGATGACCTT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAAGGTCATCATTCTCTaGTTCCAACCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLKVIIL*FQPHAG
Trigger: GCCAGCATGAGGTTGGAACAAGAGAATGATGACCTT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGTTCCGTAGAGCAATTTaGCTTGTTACTAGTTCATGG +
Preference number: 5 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVFRRAI*LVTSSW
Trigger: CCATGAACTAGTAACAAGCAAAATTGCTCTACGGAA...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATCCACCAGCCTCTGTTaGGTCAAAAGGAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSTSLC*VKRSSL
Trigger: TAAAGAGCTCCTTTTGACCAAACAGAGGCTGGTGGA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIFKAPS*LKMSLQ
Trigger: CTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATAACTATGTGCTCTCCTaGGGTGGCTGGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHNYVLS*GGWVTG
Trigger: ACCGGTCACCCAGCCACCCAAGGAGAGCACATAGTT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATG +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLIVLLC*GKAGTM
Trigger: CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAAT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATG +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIIVLLC*GKAGTM
Trigger: CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAAT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTGTTTTCTGGCCTCCTaGACTTTCCTTCAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLCFLAS*TFLQRD
Trigger: GTCCCTTTGAAGGAAAGTCAAGGAGGCCAGAAAACA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGTTTTCTGGCCTCCTaGACTTTCCTTCAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGCFLAS*TFLQRD
Trigger: GTCCCTTTGAAGGAAAGTCAAGGAGGCCAGAAAACA...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGCTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLLKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGGGCAACACAAAGCATaGAAAACATCACTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLGQHKA*KTSLAH
Trigger: GTGAGCCAGTGATGTTTTCAATGCTTTGTGTTGCCC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTGGAAGATTTCATGGTaGCCATTGCCCGTAAAGCCT +
Preference number: 5 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSWKISW*PLPVKP
Trigger: AGGCTTTACGGGCAATGGCAACCATGAAATCTTCCA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTTGGAAGATTTCATGGTaGCCATTGCCCGTAAAGCCT +
Preference number: 5 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSWKISW*PLPVKP
Trigger: AGGCTTTACGGGCAATGGCAACCATGAAATCTTCCA...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGAACAGGAAAGGGGTATaGACTGGAAGATTTCATGGT +
Preference number: 5 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWNRKGV*TGRFHG
Trigger: ACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTT...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCAGCAATTGCTCTCTGTaGTTCCGTCATGTCCACGTG +
Preference number: 5 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVSNCSL*FRHVHV
Trigger: CACGTGGACATGACGGAACAACAGAGAGCAATTGCT...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGAGAAATACTGGTGCATaGGGGTTCCACATGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMRNTGA*GFHMPV
Trigger: CACTGGCATGTGGAACCCCAATGCACCAGTATTTCT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCATTGCATCTCCAGCATaGGTATGGCCTTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSIASPA*VWPFPS
Trigger: TGAGGGAAAAGGCCATACCAATGCTGGAGATGCAAT...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGGTGACTGGTTCCTCCTaGTCAGACTCTCGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMVTGSS*SDSRCR
Trigger: TCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCAC...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGTTGGTACTTTAATATaGCAAGCCTGCTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSVGTLI*QACSIS
Trigger: ACTGATGGAGCAGGCTTGCAATATTAAAGTACCAAC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACACATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACACATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCAGACAGAGGCAAGTTaGAAACATCCTTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLQTEAS*KHPCVS
Trigger: ACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGATCTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGSCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGA...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTCTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISISCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGAAGGTCATCATTCTCTaGTTCCAACCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLKVIIL*FQPHAG
Trigger: GCCAGCATGAGGTTGGAACAAGAGAATGATGACCTT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGTTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLFKAPS*LKMSLQ
Trigger: CTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAA...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TGGACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: WTGLTLPWESGSGGNLRVIEFRV*LNQEFF
Trigger: GAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTAT...CACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACAGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: DRINTSLGIRLRRKPESGIEFRV*LNQEFF
Trigger: GAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTAT...ACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAACTATGTGCTCTCCTaGGGTGGCTGGGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVNYVLS*GGWVTG
Trigger: ACCGGTCACCCAGCCACCCAAGGAGAGCACATAGTT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATG +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLIVLLC*GKAGTM
Trigger: CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAAT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGACTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGLKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLLKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCGATTGGTTCTTTCCTTaGGACAGGATTAACACTTCC +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSDWFFP*DRINTS
Trigger: GGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATC...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCATCTGTGTCCATACTTaGGTGTACTTAGGAACTCAC +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSICVHT*VYLGTH
Trigger: GTGAGTTCCTAAGTACACCAAAGTATGGACACAGAT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTATCTGTGTCCATACTTaGGTGTACTTAGGAACTCAC +
Preference number: 5 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAICVHT*VYLGTH
Trigger: GTGAGTTCCTAAGTACACCAAAGTATGGACACAGAT...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATGTAGATGGCTCTTATTaGATTCTTCTAAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: RINTSLGIRLRRKPESGHVDGSY*ILLRVC
Trigger: ACACACCCTTAGAAGAATCAAATAAGAGCCATCTAC...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAACCTGAGAGTGGTCATGCCTGGCCCCACAGTGTGCTTTATCTGAATAAATCCACTGCACAAGGCTTCTaGGAATCAAAGCGTAAAGTA +
Preference number: 5 (lower is better)
Translates to: KPESGHAWPHSVLYLNKSTAQGF*ESKRKV
Trigger: TACTTTACGCTTTGATTCCAAGAAGCCTTGTGCAGT...GGATTTATTCAGATAAAGCACACTGTGGGGCCAGGCATGACCACTCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAATGGACTTATCAAACTaGAGAGGTATGTACCTGGTG +
Preference number: 5 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELMDLSN*RGMYLV
Trigger: CACCAGGTACATACCTCTCAAGTTTGATAAGTCCAT...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGTTTCAGAGGAATGTTTaGTACAGAGTGCATCCTAGC +
Preference number: 5 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLFQRNV*YRVHPS
Trigger: GCTAGGATGCACTCTGTACAAAACATTCCTCTGAAA...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTATTTCAGAGGAATGTTTaGTACAGAGTGCATCCTAGC +
Preference number: 5 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELFQRNV*YRVHPS
Trigger: GCTAGGATGCACTCTGTACAAAACATTCCTCTGAAA...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCTGAATCTCAATGTGTATTaGGTTGTGTGGTACCCAGGT +
Preference number: 5 (lower is better)
Translates to: GEFRLMVPTGIPKYDMGLNLNVY*VVWYPG
Trigger: ACCTGGGTACCACACAACCAAATACACATTGAGATT...CAGCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTCTCCAGCCTTATTCTaGTGCTTTCATGACACCAGA +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISISPALF*CFHDTR
Trigger: TCTGGTGTCATGAAAGCACAAGAATAAGGCTGGAGA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATAGTCTGTGGTGGGAATaGTCAGCTAATGTCTCCACA +
Preference number: 5 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYSLWWE*SANVST
Trigger: TGTGGAGACATTAGCTGACAATTCCCACCACAGACT...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp CTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAACCCTTCTGTGGAAGCACATCCAAGTGTaGCAAGTCAAATGTGTCCTA +
Preference number: 5 (lower is better)
Translates to: LQKHIQVLQVKCVLTLLWKHIQV*QVKCVL
Trigger: TAGGACACATTTGACTTGCAACACTTGGATGTGCTT...CCACAGAAGGGTTAGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGGCCGAGATCACGCCATaGCACTCCAGCCTTGACAAC +
Preference number: 5 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLAEITP*HSSLDN
Trigger: GTTGTCAAGGCTGGAGTGCAATGGCGTGATCTCGGC...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS CCA 90 bp TTTGGCTGGCTGGAATATCTCCAAACGAATGGTCTGAAATCTCACTaGAACTTTGACAATCAACAAGAAGACTGCTTGGCCTTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: FGWLEYLQTNGLKSH*NFDNQQEDCLAFSR
Trigger: CCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS-3UTR CAA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGAGCAATTGCTCTCTGTaGTTCCGTCATGTCCACGTG +
Preference number: 5 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKSNCSL*FRHVHV
Trigger: CACGTGGACATGACGGAACAACAGAGAGCAATTGCT...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGGTAAATGCAAAGCAATaGCTCTCTGTTGTTCCGTCA +
Preference number: 5 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLVNAKQ*LSVVPS
Trigger: TGACGGAACAACAGAGAGCAATTGCTTTGCATTTAC...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGATTGCATCTCCAGCATaGGTATGGCCTTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMIASPA*VWPFPS
Trigger: TGAGGGAAAAGGCCATACCAATGCTGGAGATGCAAT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CAAAATTACATAGGCAGCAACAGGAAGAGTGAGTATTACAACTCAGGTTTGAACGTGACTGGTTCCTCCTaGTCAGACTCTCGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: QNYIGSNRKSEYYNSGLNVTGSS*SDSRCR
Trigger: TCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCAC...GTTCAAACCTGAGTTGTAATACTCACTCTTCCTGTTGCTGCCTATGTAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS-3UTR CAA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTGGTATCTATCCAGCATaGCCTGGTTGTCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLGIYPA*PGCHGS
Trigger: GCTGCCATGACAACCAGGCAATGCTGGATAGATACC...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTCAAAACACAGAATGCTaGTTCCTCTGGCATATGCAG +
Preference number: 5 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPQNTEC*FLWHMQ
Trigger: CTGCATATGCCAGAGGAACAAGCATTCTGTGTTTTG...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTGCAGAAGGTCTTCCTTaGAGGTCTTTAGGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVAEGLP*RSLGEP
Trigger: TGGCTCTCCTAAAGACCTCAAAGGAAGACCTTCTGC...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251507.8
ENST00000469553.6
CDS-3UTR CAA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGGTTGGTACTTTAATATaGCAAGCCTGCTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLVGTLI*QACSIS
Trigger: ACTGATGGAGCAGGCTTGCAATATTAAAGTACCAAC...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAGTTGGTACTTTAATATaGCAAGCCTGCTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGVGTLI*QACSIS
Trigger: ACTGATGGAGCAGGCTTGCAATATTAAAGTACCAAC...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGTTGGTACTTTAATATaGCAAGCCTGCTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLVGTLI*QACSIS
Trigger: ACTGATGGAGCAGGCTTGCAATATTAAAGTACCAAC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTCAGACAGAGGCAAGTTaGAAACATCCTTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPQTEAS*KHPCVS
Trigger: ACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCAVEQFC*LLVHGQ
Trigger: TTGCCCATGAACTAGTAACAAGCAAAATTGCTCTAC...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTATTCCGTAGAGCAATTTaGCTTGTTACTAGTTCATGG +
Preference number: 5 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELFRRAI*LVTSSW
Trigger: CCATGAACTAGTAACAAGCAAAATTGCTCTACGGAA...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTTTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: PLSFSQLLMKIPSINATAFKAPS*LKMSLQ
Trigger: CTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAA...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTAGAGTTTTTCGCAGCTaGGATTTCATTCATAAGGGC +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIRVFRS*DFIHKG
Trigger: GCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAAGAGTTTTTCGCAGCTaGGATTTCATTCATAAGGGC +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGRVFRS*DFIHKG
Trigger: GCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIQISIG*NIVLLC
Trigger: GCACAAGAGCACAATGTTCAAACCAATGGAAATCTG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGCAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLQISIG*NIVLLC
Trigger: GCACAAGAGCACAATGTTCAAACCAATGGAAATCTG...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAGATTGGTTCTTTCCTTaGGACAGGATTAACACTTCC +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGDWFFP*DRINTS
Trigger: GGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATC...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCGATTGGTTCTTTCCTTaGGACAGGATTAACACTTCC +
Preference number: 5 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGDWFFP*DRINTS
Trigger: GGAAGTGTTAATCCTGTCCAAAGGAAAGAACCAATC...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTAATCAGGCAGGTACCTAAGTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGATGGCTCTTATTaGATTCTTCTAAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: PLIRQVPKCLMQRLVGELVDGSY*ILLRVC
Trigger: ACACACCCTTAGAAGAATCAAATAAGAGCCATCTAC...TAACTCTCCCACCAACCTTTGCATCAAACACTTAGGTACCTGCCTGATTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGATATGGGGCACTGCACAAGGCTTCTaGGAATCAAAGCGTAAAGTA +
Preference number: 5 (lower is better)
Translates to: KESLGLWYQQAYPSMIWGTAQGF*ESKRKV
Trigger: TACTTTACGCTTTGATTCCAAGAAGCCTTGTGCAGT...GCCCCATATCATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAATTTAGCTGGCCATTaGATAAGGCAACTGCACAAG +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLNLAGH*IRQLHK
Trigger: CTTGTGCAGTTGCCTTATCAAATGGCCAGCTAAATT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AGGATTAACACTTCCCTGGGAATCAGGCTCAGGAGGAAACCTGAGAGTGGTCATTGCCCTCGTAATCTTTaGAAAGAGCTAAAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: RINTSLGIRLRRKPESGHCPRNL*KELKEN
Trigger: GTTTTCTTTTAGCTCTTTCAAAAGATTACGAGGGCA...ATGACCACTCTCAGGTTTCCTCCTGAGCCTGATTCCCAGGGAAGTGTTAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTCTGCCCAAATCTGTATaGTTTTCCGTTGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISILPKSV*FSVGFL
Trigger: GAGAAAACCAACGGAAAACAATACAGATTTGGGCAG...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATGAGGTGCAGCCAAGGTaGAAGTCCTCATTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNEVQPR*KSSFWS
Trigger: TGACCAAAATGAGGACTTCAACCTTGGCTGCACCTC...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTACGTCTAATTGGTCATaGTTTATAGAGGAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCATSNWS*FIEEEA
Trigger: AGCCTCTTCCTCTATAAACAATGACCAATTAGACGT...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGGCTTTTGGGACATCTTGGATCTGGGACCATCTCCAGCCTTATTCTTGTGCTACAAAAACAGTCACCTaGTTACCTTCTCAGTTGCAT +
Preference number: 5 (lower is better)
Translates to: KAFGTSWIWDHLQPYSCATKTVT*LPSQLH
Trigger: ATGCAACTGAGAAGGTAACAAGGTGACTGTTTTTGT...AGCACAAGAATAAGGCTGGAGATGGTCCCAGATCCAAGATGTCCCAAAAGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTTCAAAGCTCATTTCCTaGCTGTTGAGCTCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSSKLIS*LLSSSD
Trigger: ATCACTGGAGCTCAACAGCAAGGAAATGAGCTTTGA...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACACAACAAGAAGACTGCTaGGCCTTTTCTCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTQQEDC*AFSRNL
Trigger: GAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTG...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGCAACAAGAAGACTGCTaGGCCTTTTCTCGGAATCTC +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKQQEDC*AFSRNL
Trigger: GAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTG...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGAGATGGCTTATTTGTTaGGCTGGCTGGAATATCTCC +
Preference number: 5 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMRWLIC*AGWNIS
Trigger: GGAGATATTCCAGCCAGCCAAACAAATAAGCCATCT...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTGAAGAGATGGCTTATTaGTTTGGCTGGCTGGAATAT +
Preference number: 5 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSEEMAY*FGWLEY
Trigger: ATATTCCAGCCAGCCAAACAAATAAGCCATCTCTTC...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGTGGAAGATTTCATGGTaGCCATTGCCCGTAAAGCCT +
Preference number: 5 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKWKISW*PLPVKP
Trigger: AGGCTTTACGGGCAATGGCAACCATGAAATCTTCCA...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTAACAGGAAAGGGGTATaGACTGGAAGATTTCATGGT +
Preference number: 5 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPNRKGV*TGRFHG
Trigger: ACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTT...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTACCAAAATCGCTCATTaGCAGGGTACACACGGACTA +
Preference number: 5 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVTKIAH*QGTHGL
Trigger: TAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGGT...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGACCAAAATCGCTCATTaGCAGGGTACACACGGACTA +
Preference number: 5 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKTKIAH*QGTHGL
Trigger: TAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGGT...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTGGTATCTATCCAGCATaGCCTGGTTGTCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPGIYPA*PGCHGS
Trigger: GCTGCCATGACAACCAGGCAATGCTGGATAGATACC...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGCAGAAGGTCTTCCTTaGAGGTCTTTAGGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHAEGLP*RSLGEP
Trigger: TGGCTCTCCTAAAGACCTCAAAGGAAGACCTTCTGC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
CDS-3UTR CAA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATGTTGGTACTTTAATATaGCAAGCCTGCTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYVGTLI*QACSIS
Trigger: ACTGATGGAGCAGGCTTGCAATATTAAAGTACCAAC...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: IILEEKIHCEQLGASSWDADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVHWVFL*QLTLSH
Trigger: ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTACTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PLSFSQLLMKIPSINATATCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGT...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGACTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWTCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGT...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp GTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACACAGACAGAGGCAAGTTaGAAACATCCTTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: VSLGTVHLLKVFVDMTCTQTEAS*KHPCVS
Trigger: ACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG...TGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGCTCCTTAATGCCCATTaGTCATTGTACTTATGGCTC +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLLLNAH*SLYLWL
Trigger: GAGCCATAAGTACAATGACAAATGGGCATTAAGGAG...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325589.9
CDS-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATAAGGTCATCATTCTCTaGTTCCAACCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDKVIIL*FQPHAG
Trigger: GCCAGCATGAGGTTGGAACAAGAGAATGATGACCTT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLVEQFC*LLVHGQ
Trigger: TTGCCCATGAACTAGTAACAAGCAAAATTGCTCTAC...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIVEQFC*LLVHGQ
Trigger: TTGCCCATGAACTAGTAACAAGCAAAATTGCTCTAC...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGTTCCGTAGAGCAATTTaGCTTGTTACTAGTTCATGG +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLFRRAI*LVTSSW
Trigger: CCATGAACTAGTAACAAGCAAAATTGCTCTACGGAA...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTCCTTGACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTTTCCGTAGAGCAATTTaGCTTGTTACTAGTTCATGG +
Preference number: 5 (lower is better)
Translates to: LLDFPSKGHQEESSQISIFRRAI*LVTSSW
Trigger: CCATGAACTAGTAACAAGCAAAATTGCTCTACGGAA...AATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTCAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGAGAGTTTTTCGCAGCTaGGATTTCATTCATAAGGGC +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLRVFRS*DFIHKG
Trigger: GCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGGTGCCCGTGGCCGTTTaGATAGAGTTCAGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVVPVAV*IEFRVL
Trigger: CAAAACCCTGAACTCTATCAAAACGGCCACGGGCAC...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATG +
Preference number: 5 (lower is better)
Translates to: KMDLSNLRGMYLVIFRDGIVLLC*GKAGTM
Trigger: CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAAT...TCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATG +
Preference number: 5 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNIVLLC*GKAGTM
Trigger: CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAAT...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTTGTTTTCTGGCCTCCTaGACTTTCCTTCAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVCFLAS*TFLQRD
Trigger: GTCCCTTTGAAGGAAAGTCAAGGAGGCCAGAAAACA...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp AGAGTTTTTCGCAGCTTGGATTTCATTCATAAGGGCTCCTCTCTGATGTTCAAGCTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: RVFRSLDFIHKGSSLMFKLKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...CTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACATTTCTTCCATCATCTaGCCAGCTGGCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNISSII*PAGLST
Trigger: TGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAAT...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp CAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTATTTCTTCAGCTTCTaGGTTGGTACCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: QSWNSSPAKSLCGYDMHSYFFSF*VGTIDL
Trigger: CAGGTCTATGGTACCAACCAAGAAGCTGAAGAAATA...GCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATAGTAGTTTGGTTGGTTaGAAAGGATCAGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDSSLVG*KGSEAS
Trigger: GGAGGCCTCTGATCCTTTCAAACCAACCAAACTACT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ATCATTTTAGAGGAAAAGATCCACTGTGAGCAACTTGGTGCATCCTCCTGGGATATGGACTTATCAAACTaGAGAGGTATGTACCTGGTG +
Preference number: 5 (lower is better)
Translates to: IILEEKIHCEQLGASSWDMDLSN*RGMYLV
Trigger: CACCAGGTACATACCTCTCAAGTTTGATAAGTCCAT...ATCCCAGGAGGATGCACCAAGTTGCTCACAGTGGATCTTTTCCTCTAAAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTTTTCTGATACCTTGCTaGGTCTGCAATTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSFLIPC*VCNSSA
Trigger: TGCTGAAGAATTGCAGACCAAGCAAGGTATCAGAAA...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp TGCTGCTACTCCTGCTTCAGAAATCTTCCTTTAACGACAAACCTCTTCAGCTCTACACTTTCTGATACCTaGCTTGGTCTGCAATTCTTC +
Preference number: 5 (lower is better)
Translates to: CCYSCFRNLPLTTNLFSSTLSDT*LGLQFF
Trigger: GAAGAATTGCAGACCAAGCAAGGTATCAGAAAGTGT...AGAGCTGAAGAGGTTTGTCGTTAAAGGAAGATTTCTGAAGCAGGAGTAGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS TCA 90 bp TGGCTTATTTGTTTGGCTGGCTGGAATATCTCCAAACGAATGGTCTaGAATCTCACTGGAACTTTGACAATCAACAAGAAGACTGCTTGG +
Preference number: 5 (lower is better)
Translates to: WLICLAGWNISKRMV*NLTGTLTINKKTAW
Trigger: CCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS-3UTR CAA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTCATGGCTTTTTCCAATaGTTCATCACCATTAGAAAC +
Preference number: 5 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPHGFFQ*FITIRN
Trigger: GTTTCTAATGGTGATGAACAATTGGAAAAAGCCATG...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp CAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGAATCTCACTGGAACTTaGACAATCAACAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: QTEASLKHPCVSLGTVHLNLTGT*TINKKT
Trigger: AGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATT...CAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTAATCTCACTGGAACTTaGACAATCAACAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPNLTGT*TINKKT
Trigger: AGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATT...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAAGATGGCTTATTTGTTaGGCTGGCTGGAATATCTCC +
Preference number: 5 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTRWLIC*AGWNIS
Trigger: GGAGATATTCCAGCCAGCCAAACAAATAAGCCATCT...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAATTTCATGGTTGCCATaGCCCGTAAAGCCTCTACTT +
Preference number: 5 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTISWLP*PVKPLL
Trigger: AAGTAGAGGCTTTACGGGCAATGGCAACCATGAAAT...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGATTTCATGGTTGCCATaGCCCGTAAAGCCTCTACTT +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKISWLP*PVKPLL
Trigger: AAGTAGAGGCTTTACGGGCAATGGCAACCATGAAAT...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTCTCCACATTGCTGGATaGGTCTATAATTCTCACAGA +
Preference number: 5 (lower is better)
Translates to: PLSFSQLLMKIPSINATALHIAG*VYNSHR
Trigger: TCTGTGAGAATTATAGACCAATCCAGCAATGTGGAG...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp GCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTGTCTGGAAGAACGTTaGAATGCTGTACAGAAACTG +
Preference number: 5 (lower is better)
Translates to: ASLKHPCVSLGTVHLLKVCLEER*NAVQKL
Trigger: CAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACA...GACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGTGTCTGGAAGAACGTTaGAATGCTGTACAGAAACTG +
Preference number: 5 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMCLEER*NAVQKL
Trigger: CAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACA...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGTCACCACCTCATATATaGCATCTCCAGCATTGGTAT +
Preference number: 5 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWSPPHI*HLQHWY
Trigger: ATACCAATGCTGGAGATGCAATATATGAGGTGGTGA...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp CCCCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGCTGACTCTCTCGCATaGTCTGATATTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: PLSFSQLLMKIPSINATAADSLA*SDILSH
Trigger: ATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGC...AGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp CATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAACTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: HFLQTEASLKHPCVSLGTTCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGT...TGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACACAGACAGAGGCAAGTTaGAAACATCCTTGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTQTEAS*KHPCVS
Trigger: ACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTG...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAATGCCCATTTGTCATaGTACTTATGGCTCGTTTTA +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLNAHLS*YLWLVL
Trigger: TAAAACGAGCCATAAGTACAATGACAAATGGGCATT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325589.9
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATCTTCGGTTCTCCCTCTaGTATCTATCCATTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHLRFSL*YLSIGS
Trigger: AGACCCAATGGATAGATACAAGAGGGAGAACCGAAG...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATAAGGTCATCATTCTCTaGTTCCAACCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHKVIIL*FQPHAG
Trigger: GCCAGCATGAGGTTGGAACAAGAGAATGATGACCTT...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAAAGGTCATCATTCTCTaGTTCCAACCTCATGCTGGC +
Preference number: 5 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVKVIIL*FQPHAG
Trigger: GCCAGCATGAGGTTGGAACAAGAGAATGATGACCTT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTCCACCAGCCTCTGTTaGGTCAAAAGGAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHSTSLC*VKRSSL
Trigger: TAAAGAGCTCCTTTTGACCAAACAGAGGCTGGTGGA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTATCCACCAGCCTCTGTTaGGTCAAAAGGAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVSTSLC*VKRSSL
Trigger: TAAAGAGCTCCTTTTGACCAAACAGAGGCTGGTGGA...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR CAA 90 bp GACTTTCCTTCAAAGGGACACCAGGAAGAATCCTCCCAGATTTCCATTGGTTTGATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: DFPSKGHQEESSQISIGLIEFRV*LNQEFF
Trigger: GAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTAT...CAAACCAATGGAAATCTGGGAGGATTCTTCCTGGTGTCCCTTTGAAGGAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGGGTAAGGCTGGAATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SQISIGLNIVLLCLGKAGIEFRV*LNQEFF
Trigger: GAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTAT...TCCAGCCTTACCCAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATTGTTTTCTGGCCTCCTaGACTTTCCTTCAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHCFLAS*TFLQRD
Trigger: GTCCCTTTGAAGGAAAGTCAAGGAGGCCAGAAAACA...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTATTTCTTCCATCATCTaGCCAGCTGGCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLISSII*PAGLST
Trigger: TGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAAT...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAAGCCAACACAGACACTaGGAATGCTGGGTTATGTTC +
Preference number: 5 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVSQHRH*ECWVMF
Trigger: GAACATAACCCAGCATTCCAAGTGTCTGTGTTGGCT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGGAGGTGCAGCCAAGGTaGAAGTCCTCATTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVEVQPR*KSSFWS
Trigger: TGACCAAAATGAGGACTTCAACCTTGGCTGCACCTC...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GATGGACTTATCAAACTTGAGAGGTATGTACCTGGTGATTTTTCGAGACGGAATTCTCCAGCCTTATTCTaGTGCTTTCATGACACCAGA +
Preference number: 5 (lower is better)
Translates to: DGLIKLERYVPGDFSRRNSPALF*CFHDTR
Trigger: TCTGGTGTCATGAAAGCACAAGAATAAGGCTGGAGA...ATTCCGTCTCGAAAAATCACCAGGTACATACCTCTCAAGTTTGATAAGTCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CTAAAGCACAGTCCTGCAGAAGCACATCCAAGTGTTGCAAGTCAAATGTGTCCTTCATCAAAATCTGCTTaGCATAGAATGGTTACACTG +
Preference number: 5 (lower is better)
Translates to: LKHSPAEAHPSVASQMCPSSKSA*HRMVTL
Trigger: CAGTGTAACCATTCTATGCAAAGCAGATTTTGATGA...AGGACACATTTGACTTGCAACACTTGGATGTGCTTCTGCAGGACTGTGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS TCA 90 bp GGTCTGGGTGTAGAAATTTCTGTGTTAGACGGATCCAAAATTAACTaGAGAGATGGCTTATTTGTTTGGCTGGCTGGAATATCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: GLGVEISVLDGSKIN*RDGLFVWLAGISPN
Trigger: GTTTGGAGATATTCCAGCCAGCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS TCA 90 bp CTTCGAAGTTGTTTCTGTAGAGGTCTCTCAAACCATAGTCGTACATaGTTTTCACCAAAACACAGAATGCTTGTTCCTCTGGCATATGCA +
Preference number: 5 (lower is better)
Translates to: LRSCFCRGLSNHSRT*FSPKHRMLVPLAYA
Trigger: TGCATATGCCAGAGGAACAAGCATTCTGTGTTTTGGTGAAAATCATGTACGACTATGGTTTGAGAGACCTCTACAGAAACAACTTCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251507.8
ENST00000474375.6
ENST00000681986.1
CDS GCA 90 bp AATGGTCTGAAATCTCACTGGAACTTTGACAATCAACAAGAAGACTaGTTGGCCTTTTCTCGGAATCTCTCAAAATCTCTTCCATGGCTT +
Preference number: 5 (lower is better)
Translates to: NGLKSHWNFDNQQED*LAFSRNLSKSLPWL
Trigger: AAGCCATGGAAGAGATTTTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS-3UTR CAA 90 bp TTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTGAAGAGATGGCTTATTaGTTTGGCTGGCTGGAATAT +
Preference number: 5 (lower is better)
Translates to: FLQTEASLKHPCVSLGTVEEMAY*FGWLEY
Trigger: ATATTCCAGCCAGCCAAACAAATAAGCCATCTCTTC...AACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGGAAGAGATGGCTTATTaGTTTGGCTGGCTGGAATAT +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKEEMAY*FGWLEY
Trigger: ATATTCCAGCCAGCCAAACAAATAAGCCATCTCTTC...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCTCCACATTGCTGGATaGGTCTATAATTCTCACAGA +
Preference number: 5 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKLHIAG*VYNSHR
Trigger: TCTGTGAGAATTATAGACCAATCCAGCAATGTGGAG...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGGTAAATGCAAAGCAATaGCTCTCTGTTGTTCCGTCA +
Preference number: 5 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKVNAKQ*LSVVPS
Trigger: TGACGGAACAACAGAGAGCAATTGCTTTGCATTTAC...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp ACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTTTCTTTGTTAGAAAGTaGCTGCACTGTAATCACAAC +
Preference number: 5 (lower is better)
Translates to: TDRGKFETSLCQSWNSSPFFVRK*LHCNHN
Trigger: GTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAA...AGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGTCACCACCTCATATATaGCATCTCCAGCATTGGTAT +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKSPPHI*HLQHWY
Trigger: ATACCAATGCTGGAGATGCAATATATGAGGTGGTGA...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCATCACCTGTTCCACTaGAGAGTTCATTATCACTCT +
Preference number: 5 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKHHLFH*RVHYHS
Trigger: AGAGTGATAATGAACTCTCAAGTGGAACAGGTGATG...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTCTTATAGAGCGATTCTaGACCATCTCCTCCAGTATC +
Preference number: 5 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLLIERF*TISSSI
Trigger: GATACTGGAGGAGATGGTCAAGAATCGCTCTATAAG...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTAAGAAAAGACTGCCCTaGACAGTACCCAATGTCTTC +
Preference number: 5 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLKKRLP*TVPNVF
Trigger: GAAGACATTGGGTACTGTCAAGGGCAGTCTTTTCTT...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTTCGGTTCTCCCTCTaGTATCTATCCATTGGGTCT +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLRFSL*YLSIGS
Trigger: AGACCCAATGGATAGATACAAGAGGGAGAACCGAAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTTCAAAGCACCCTCCTaGCTGAAAATGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVFKAPS*LKMSLQ
Trigger: CTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLIEFRV*LNQEFF
Trigger: GAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTAT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGATTGTGCTCTTGTGCTaGGGTAAGGCTGGAACTATG +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVIVLLC*GKAGTM
Trigger: CATAGTTCCAGCCTTACCCAAGCACAAGAGCACAAT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACACAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTQISIG*NIVLLC
Trigger: GCACAAGAGCACAATGTTCAAACCAATGGAAATCTG...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCACAGATTTCCATTGGTTaGAACATTGTGCTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKAQISIG*NIVLLC
Trigger: GCACAAGAGCACAATGTTCAAACCAATGGAAATCTG...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGAAGTCTAATGTCAAATaGCAGCTGGTTACAGGGTGT +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKKSNVK*QLVTGC
Trigger: ACACCCTGTAACCAGCTGCAATTTGACATTAGACTT...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATTATTTCTTCAGCTTCTaGGTTGGTACCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDYFFSF*VGTIDL
Trigger: CAGGTCTATGGTACCAACCAAGAAGCTGAAGAAATA...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392064.6
CDS-3UTR CAA 90 bp GGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGCACAGCTAAAACATATTTCTTCAGCTTCTaGGTTGGTACCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: GTVHLLKVFVDMTCTAKTYFFSF*VGTIDL
Trigger: CAGGTCTATGGTACCAACCAAGAAGCTGAAGAAATA...TGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCAAATTTAGCTGGCCATTaGATAAGGCAACTGCACAAG +
Preference number: 5 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKANLAGH*IRQLHK
Trigger: CTTGTGCAGTTGCCTTATCAAATGGCCAGCTAAATT...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp CATTGCAGTGAAGGAGAGTTTAGGCTTATGGTACCAACAGGCATACCCAAGTATTGCCCTCGTAATCTTTaGAAAGAGCTAAAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: HCSEGEFRLMVPTGIPKYCPRNL*KELKEN
Trigger: GTTTTCTTTTAGCTCTTTCAAAAGATTACGAGGGCA...ATACTTGGGTATGCCTGTTGGTACCATAAGCCTAAACTCTCCTTCACTGCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp CAGGAAGAATCCTCCCAGATTTCCATTGGTTTGAACATTGTGCTCTTGTGCTTGACATCCATACAAAGGTaGCTTTTCTACTTTACTCAG +
Preference number: 5 (lower is better)
Translates to: QEESSQISIGLNIVLLCLTSIQR*LFYFTQ
Trigger: CTGAGTAAAGTAGAAAAGCAACCTTTGTATGGATGT...CAAGCACAAGAGCACAATGTTCAAACCAATGGAAATCTGGGAGGATTCTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATTCAATGTGTATTTGGTaGTGTGGTACCCAGGTAAAC +
Preference number: 5 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDSMCIW*CGTQVN
Trigger: GTTTACCTGGGTACCACACAACCAAATACACATTGA...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCAAATCTCAATGTGTATTaGGTTGTGTGGTACCCAGGT +
Preference number: 5 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKANLNVY*VVWYPG
Trigger: ACCTGGGTACCACACAACCAAATACACATTGAGATT...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp GCAACAGCTGGAGTTACCTACAAATATACAAACTTGTATCTATCCATTGGGTCTACACCCACTTTAATATaGCAAGCCTGCTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: ATAGVTYKYTNLYLSIGSTPTLI*QACSIS
Trigger: ACTGATGGAGCAGGCTTGCAATATTAAAGTGGGTGT...AGACCCAATGGATAGATACAAGTTTGTATATTTGTAGGTAACTCCAGCTGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGATGTCCTGGGACTTTTaGACAGGAGGTGTGAGCTTA +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVMSWDF*TGGVSL
Trigger: TAAGCTCACACCTCCTGTCAAAAAGTCCCAGGACAT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCTCATTTCCTTGCTGTaGAGCTCCAGTGATTCGGAA +
Preference number: 5 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLLISLL*SSSDSE
Trigger: TTCCGAATCACTGGAGCTCAACAGCAAGGAAATGAG...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATAGGCAGGTGGATCATTaGAGGTCAAGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYRQVDH*RSRVQD
Trigger: GTCTTGAACTCTTGACCTCAAATGATCCACCTGCCT...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS TCA 90 bp CAGGGTGTCATGGAGACCTTCATAGACCCTTCATATTTAACTAGGTaGATAGTCTGTCTCGGTGTAAGACTAAATTTCATCTGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: QGVMETFIDPSYLTR*IVCLGVRLNFICCF
Trigger: AAAGCAACAGATGAAATTTAGTCTTACACCGAGACAGACTATTCACCTAGTTAAATATGAAGGGTCTATGAAGGTCTCCATGACACCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp CCTCTCTTTCTCTCAGCTTCTTATGAAGATTCCCAGTATAAATGCAACAGCTGGCATGGCTTTTTCCAATaGTTCATCACCATTAGAAAC +
Preference number: 5 (lower is better)
Translates to: PLFLSASYEDSQYKCNSWHGFFQ*FITIRN
Trigger: GTTTCTAATGGTGATGAACAATTGGAAAAAGCCATG...CCAGCTGTTGCATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACGATGCTATCTCCACATaGCTGGATTGGTCTATAATT +
Preference number: 5 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNDAIST*LDWSII
Trigger: AATTATAGACCAATCCAGCAATGTGGAGATAGCATC...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGTTTAACATCAGACACTaGTCTGGAAGAACGTTTGAA +
Preference number: 5 (lower is better)
Translates to: TSTWEMIHKVASKLQPPMFNIRH*SGRTFE
Trigger: TTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAA...CATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTCATCACCTGTTCCACTaGAGAGTTCATTATCACTCT +
Preference number: 5 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLHHLFH*RVHYHS
Trigger: AGAGTGATAATGAACTCTCAAGTGGAACAGGTGATG...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGAAGTTTGAAACATCCTaGTGTCAGTCTTGGAACAGT +
Preference number: 5 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMKFETS*CQSWNS
Trigger: ACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000469553.6
ENST00000478442.5
ENST00000486220.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTCTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSCIYP*GLPVAA
Trigger: AGCTGCAACAGGAAGACCCAATGGATAGATACAAGA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ACATTTTCTACAGACAGAGGCAAGTTTGAAACATCCTTGTGTCAGTCTTGGAACTTCCGTAGAGCAATTTaGCTTGTTACTAGTTCATGG +
Preference number: 5 (lower is better)
Translates to: TFSTDRGKFETSLCQSWNFRRAI*LVTSSW
Trigger: CCATGAACTAGTAACAAGCAAAATTGCTCTACGGAA...GTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTGAAAAATTCTGGCTaGTTTTCTGGCCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLKNSG*FSGLLD
Trigger: GTCAAGGAGGCCAGAAAACAAGCCAGAATTTTTCAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TTCAGAACAAATGTTTATTACTGCTTAATGGGGCCAAAGGGGCAACACAAAGCACTGTATTGTTTTCCGTaGGTTTTCTCACTTCAGCTA +
Preference number: 5 (lower is better)
Translates to: FRTNVYYCLMGPKGQHKALYCFP*VFSLQL
Trigger: TAGCTGAAGTGAGAAAACCAACGGAAAACAATACAG...TGCTTTGTGTTGCCCCTTTGGCCCCATTAAGCAGTAATAAACATTTGTTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTACTGCCCAAATCTGTATaGTTTTCCGTTGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVLPKSV*FSVGFL
Trigger: GAGAAAACCAACGGAAAACAATACAGATTTGGGCAG...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACGATTGTAAGTCACAGTaGACAAGTGACGGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDDCKSQ*TSDGKA
Trigger: AGCCTTCCCGTCACTTGTCAACTGTGACTTACAATC...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CAA 90 bp TGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCATGGCTTTTTCCAATaGTTCATCACCATTAGAAAC +
Preference number: 5 (lower is better)
Translates to: WEMIHKVASKLQPPMQRKHGFFQ*FITIRN
Trigger: GTTTCTAATGGTGATGAACAATTGGAAAAAGCCATG...CTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGAATCTCACTGGAACTTaGACAATCAACAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKNLTGT*TINKKT
Trigger: AGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATT...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTAACAGGAAAGGGGTATaGACTGGAAGATTTCATGGT +
Preference number: 5 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPNRKGV*TGRFHG
Trigger: ACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTT...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp TTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTTGTGGATATGACATGTTTAACATCAGACACTaGTCTGGAAGAACGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LCQSWNSSPAKSLCGYDMFNIRH*SGRTFE
Trigger: TTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAA...CATGTCATATCCACAAAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGTTCTTTGTTAGAAAGTaGCTGCACTGTAATCACAAC +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKFFVRK*LHCNHN
Trigger: GTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAA...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTCACAGTCATGTATACTaGCTTATCTTTTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLHSHVY*LIFWGF
Trigger: GAAACCCCAAAAGATAAGCAAGTATACATGACTGTG...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251507.8
CDS-3UTR CAA 90 bp AATGAACATTATGACCTTTCAAACACTGATTGTAAGTCACAGTTGACAAGTGACCTTATAGAGCGATTCTaGACCATCTCCTCCAGTATC +
Preference number: 5 (lower is better)
Translates to: NEHYDLSNTDCKSQLTSDLIERF*TISSSI
Trigger: GATACTGGAGGAGATGGTCAAGAATCGCTCTATAAG...GTCACTTGTCAACTGTGACTTACAATCAGTGTTTGAAAGGTCATAATGTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CAA 90 bp TCACAGTTGACAAGTGACGGGAAGGCTAATAAATTTATTTATCTTTTCTGTAGCAAGAAAAGACTGCCCTaGACAGTACCCAATGTCTTC +
Preference number: 5 (lower is better)
Translates to: SQLTSDGKANKFIYLFCSKKRLP*TVPNVF
Trigger: GAAGACATTGGGTACTGTCAAGGGCAGTCTTTTCTT...GCTACAGAAAAGATAAATAAATTTATTAGCCTTCCCGTCACTTGTCAACTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CAA 90 bp TCACAGTTGACAAGTGACGGGAAGGCTAATAAATTTATTTATCTTTTCTGTAGCCAAAACACAGAATGCTaGTTCCTCTGGCATATGCAG +
Preference number: 5 (lower is better)
Translates to: SQLTSDGKANKFIYLFCSQNTEC*FLWHMQ
Trigger: CTGCATATGCCAGAGGAACAAGCATTCTGTGTTTTG...GCTACAGAAAAGATAAATAAATTTATTAGCCTTCCCGTCACTTGTCAACTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS-3UTR CAA 90 bp CCTGTGACAAAGATCTTCTTATCACTTCAACCTTGGAATAACAGATGTCTCCATGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: PVTKIFLSLQPWNNRCLHVEQFC*LLVHGQ
Trigger: TTGCCCATGAACTAGTAACAAGCAAAATTGCTCTAC...ATGGAGACATCTGTTATTCCAAGGTTGAAGTGATAAGAAGATCTTTGTCACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp AAGTTTGAAACATCCTTGTGTCAGTCTTGGAACAGTTCACCTGCTAAAAGTCTTGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: KFETSLCQSWNSSPAKSLVEQFC*LLVHGQ
Trigger: TTGCCCATGAACTAGTAACAAGCAAAATTGCTCTAC...AAGACTTTTAGCAGGTGAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS-3UTR CAA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVVEQFC*LLVHGQ
Trigger: TTGCCCATGAACTAGTAACAAGCAAAATTGCTCTAC...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392064.6
ENST00000485114.1
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGAGAGTTTTTCGCAGCTaGGATTTCATTCATAAGGGC +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVRVFRS*DFIHKG
Trigger: GCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCT...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ATAAAGTTGCTTCTAAACTGCAACCTCCCATGCAAAGAAAGCACTCATGCTAAGTGTTTTAGGACATATTaGTACAATTCAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: IKLLLNCNLPCKESTHAKCFRTY*YNSGSG
Trigger: TCCTGAGCCTGAATTGTACAAATATGTCCTAAAACA...CTTAGCATGAGTGCTTTCTTTGCATGGGAGGTTGCAGTTTAGAAGCAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp ATCTCAATGTGTATTTGGTTGTGTGGTACCCAGGTAAACAAAAGCAGCAGAGATACATCCATACAAAGGTaGCTTTTCTACTTTACTCAG +
Preference number: 5 (lower is better)
Translates to: ISMCIWLCGTQVNKSSRDTSIQR*LFYFTQ
Trigger: CTGAGTAAAGTAGAAAAGCAACCTTTGTATGGATGT...ATCTCTGCTGCTTTTGTTTACCTGGGTACCACACAACCAAATACACATTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTCAATGTGTATTTGGTaGTGTGGTACCCAGGTAAAC +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVSMCIW*CGTQVN
Trigger: GTTTACCTGGGTACCACACAACCAAATACACATTGA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAACGTCTAATTGGTCATaGTTTATAGAGGAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVTSNWS*FIEEEA
Trigger: AGCCTCTTCCTCTATAAACAATGACCAATTAGACGT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTGATGCTATCTCCACATaGCTGGATTGGTCTATAATT +
Preference number: 5 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPDAIST*LDWSII
Trigger: AATTATAGACCAATCCAGCAATGTGGAGATAGCATC...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATGATGCTATCTCCACATaGCTGGATTGGTCTATAATT +
Preference number: 5 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYDAIST*LDWSII
Trigger: AATTATAGACCAATCCAGCAATGTGGAGATAGCATC...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp TATGTAACATCAACCTGGGAAATGATCCATAAAGTTGCTTCTAAACTGCAACCTCACAGTCATGTATACTaGCTTATCTTTTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: YVTSTWEMIHKVASKLQPHSHVY*LIFWGF
Trigger: GAAACCCCAAAAGATAAGCAAGTATACATGACTGTG...AGGTTGCAGTTTAGAAGCAACTTTATGGATCATTTCCCAGGTTGATGTTACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGGTAGAGCAATTTTGCTaGTTACTAGTTCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVVEQFC*LLVHGQ
Trigger: TTGCCCATGAACTAGTAACAAGCAAAATTGCTCTAC...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGTTCCGTAGAGCAATTTaGCTTGTTACTAGTTCATGG +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVFRRAI*LVTSSW
Trigger: CCATGAACTAGTAACAAGCAAAATTGCTCTACGGAA...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000367688.3
ENST00000392064.6
ENST00000469553.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GTGTTTGATGCAAAGGTTGGTGGGAGAGTTAGTAGACAGATTTTAGTGAAAGTAATAGAGTTCAGGGTTTaGCTAAACCAAGAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: VFDAKVGGRVSRQILVKVIEFRV*LNQEFF
Trigger: GAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTAT...TACTTTCACTAAAATCTGTCTACTAACTCTCCCACCAACCTTTGCATCAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCTGTATTGTTTTCCGTaGGTTTTCTCACTTCAGCTA +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVLYCFP*VFSLQL
Trigger: TAGCTGAAGTGAGAAAACCAACGGAAAACAATACAG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392064.6
ENST00000489615.5
CDS-3UTR CAA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATATACTTCTGGTTGGATaGTCCAACTCTTTTGCCATA +
Preference number: 5 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYILLVG*SNSFAI
Trigger: TATGGCAAAAGAGTTGGACAATCCAACCAGAAGTAT...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp GAACAGGTCAGTTTAAATAGCATCCCTTTGAAAAGTGTCATACAAGAAAGAGTGCACAAGAAAAACATTTaGGCTAAATTATCCACTGCG +
Preference number: 5 (lower is better)
Translates to: EQVSLNSIPLKSVIQERVHKKNI*AKLSTA
Trigger: CGCAGTGGATAATTTAGCCAAAATGTTTTTCTTGTG...CACTCTTTCTTGTATGACACTTTTCAAAGGGATGCTATTTAAACTGACCTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS-3UTR CAA 90 bp ATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCCATAGATTATAGTTATGGAAACTTCTaGCAGCAATTCAGTATCCTT +
Preference number: 5 (lower is better)
Translates to: IDLKILLVGLSNSFAIDYSYGNF*QQFSIL
Trigger: AAGGATACTGAATTGCTGCAAGAAGTTTCCATAACT...ATAATCTATGGCAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS-3UTR CAA 90 bp ATACAAAGATCATTGACCTCAAGATACTTCTGGTTGGATTGTCCAACTCTTTTGCTTATACAAAGATCATaGACCTCAAGATACTTCTGG +
Preference number: 5 (lower is better)
Translates to: IQRSLTSRYFWLDCPTLLLIQRS*TSRYFW
Trigger: CCAGAAGTATCTTGAGGTCAATGATCTTTGTATAAG...CAAAAGAGTTGGACAATCCAACCAGAAGTATCTTGAGGTCAATGATCTTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635248.1
CDS TCA 72 bp TTCAGGCGCCCGCGTTCCACCCTCCACCTCGCGCTCTaGAGCCGGGCCGGTCCCGTTCGCTCCGCCACCGCT +
Preference number: 6 (lower is better)
Translates to: FRRPRSTLHLAL*SRAGPVRSATA
Trigger: AGCGGTGGCGGAGCGAACGGGACCGGCCCGGCTTCAGAGCGCGAGGTGGAGGGTGGAACGCGGGCGCCTGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000681986.1
CDS TCA 72 bp CCGCCACCGCTGGAGCCCGAGGAGGGCGGAGGGAACTaGGAGGGGAGGGGAGAAGGGCCGCCTGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: PPPLEPEEGGGN*EGRGEGPPGRK
Trigger: CTTCCTGCCAGGCGGCCCTTCTCCCCTCCCCTCTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS GCA 72 bp CTTCCCACAACCACCTCTTCACGTCTCCGCGGGCGCTaGCGAGACAACAACTCCTTCAGGCGCCCGCGTTCC +
Preference number: 6 (lower is better)
Translates to: LPTTTSSRLRGR*RDNNSFRRPRS
Trigger: GGAACGCGGGCGCCTGAAGGAGTTGTTGTCTCGGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000635248.1
ENST00000681986.1
CDS CCA 72 bp AACTGCGGTGGGAGGGGAGCCAGGTTTAGGTCTCCCTaGGAGGACGTACAAGCCAGTCTGTGGTGGGAATTG +
Preference number: 6 (lower is better)
Translates to: NCGGRGARFRSP*EDVQASLWWEL
Trigger: CAATTCCCACCACAGACTGGCTTGTACGTCCTCCCAGGGAGACCTAAACCTGGCTCCCCTCCCACCGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS GCA 72 bp CCCAGGAGGGGCCAACCGACACCTCATACAGCCAGGTaGCCTTCTGAGATGAAGCTTCCAGAGGAAGGATCA +
Preference number: 6 (lower is better)
Translates to: PRRGQPTPHTAR*PSEMKLPEEGS
Trigger: TGATCCTTCCTCTGGAAGCTTCATCTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCCCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS TCA 72 bp GGGCCAACCGACACCTCATACAGCCAGGTGCCCTTCTaGGATGAAGCTTCCAGAGGAAGGATCAGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: GPTDTSYSQVPF*DEASRGRIRQQ
Trigger: TTGCTGCCTGATCCTTCCTCTGGAAGCTTCATCTCAGAAGGGCACCTGGCTGTATGAGGTGTCGGTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS CCA 72 bp GCAGCTTCCACTGGTGATACCCAGGCAAACAGGGTCTaGAGTGGACCTCCAGCAAACTCCAACAGACCTTTG +
Preference number: 6 (lower is better)
Translates to: AASTGDTQANRV*SGPPANSNRPL
Trigger: CAAAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCACCAGTGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS GCA 72 bp AGCATTGCCTGGTTGTCATGGCAGCCTGCCAATAACTaGCATACCTCTGCCCTCAATGCTTCAGGGACACCA +
Preference number: 6 (lower is better)
Translates to: SIAWLSWQPANN*HTSALNASGTP
Trigger: TGGTGTCCCTGAAGCATTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000526253.1
ENST00000681986.1
CDS GCA 72 bp CACGCATACTCATTCACCAGCTTGCTCCTCTCGTCGTaGATGTCCTGGGACTTTTTGACAGGAGGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: HAYSFTSLLLSS*MSWDFLTGGVS
Trigger: GCTCACACCTCCTGTCAAAAAGTCCCAGGACATGCACGACGAGAGGAGCAAGCTGGTGAATGAGTATGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS CAA 72 bp GGACCCCCTCCACTAGTAGGAGTGACTGGTTCCTCCTaGTCAGACTCTCGCTGTAGACTCACCACCTCATAT +
Preference number: 6 (lower is better)
Translates to: GPPPLVGVTGSS*SDSRCRLTTSY
Trigger: ATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS CAA 90 bp ATCCCCAGAAGTTCCAGCACTCGACACGCATACTCATTCACCAGCTaGCTCCTCTCGTCGTGCATGTCCTGGGACTTTTTGACAGGAGGT +
Preference number: 6 (lower is better)
Translates to: IPRSSSTRHAYSFTS*LLSSCMSWDFLTGG
Trigger: ACCTCCTGTCAAAAAGTCCCAGGACATGCACGACGAGAGGAGCAAGCTGGTGAATGAGTATGCGTGTCGAGTGCTGGAACTTCTGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS GCA 72 bp CAGCTCCAGACCAGACTATCCAAGGAAAAATCCTACTaGAGCTCAGTGCCAGTGTACACACCCACCAGGAGA +
Preference number: 6 (lower is better)
Translates to: QLQTRLSKEKSY*SSVPVYTPTRR
Trigger: TCTCCTGGTGGGTGTGTACACTGGCACTGAGCTGCAGTAGGATTTTTCCTTGGATAGTCTGGTCTGGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465412.5
ENST00000478442.5
CDS CCA 72 bp TCATTCACCAGCTTGCTCCTCTCGTCGTGCATGTCCTaGGACTTTTTGACAGGAGGTGTGAGCTTAGCAGCT +
Preference number: 6 (lower is better)
Translates to: SFTSLLLSSCMS*DFLTGGVSLAA
Trigger: AGCTGCTAAGCTCACACCTCCTGTCAAAAAGTCCCAGGACATGCACGACGAGAGGAGCAAGCTGGTGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS CAA 72 bp AGTTCCAGCACTCGACACGCATACTCATTCACCAGCTaGCTCCTCTCGTCGTGCATGTCCTGGGACTTTTTG +
Preference number: 6 (lower is better)
Translates to: SSSTRHAYSFTS*LLSSCMSWDFL
Trigger: CAAAAAGTCCCAGGACATGCACGACGAGAGGAGCAAGCTGGTGAATGAGTATGCGTGTCGAGTGCTGGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS CAA 90 bp GGTGACATTGGACCCCCTCCACTAGTAGGAGTGACTGGTTCCTCCTaGTCAGACTCTCGCTGTAGACTCACCACCTCATATATTGCATCT +
Preference number: 6 (lower is better)
Translates to: GDIGPPPLVGVTGSS*SDSRCRLTTSYIAS
Trigger: AGATGCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS TCA 72 bp ATTATCACTCTCCTCTTCTGCTTCATCATCCTGGGGTaGCATTGGACCCCCTCCACTAGTAGGAGTGACTGG +
Preference number: 6 (lower is better)
Translates to: IITLLFCFIILG*HWTPSTSRSDW
Trigger: CCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAGGATGATGAAGCAGAAGAGGAGAGTGATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS GCA 72 bp CCAGAAAACCCATGGACAATGTTCCGATGCCACGGGTaGCAACATTCGGGCAGACACTTTAGAAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: PENPWTMFRCHG*QHSGRHFRKSP
Trigger: TGGTGACTTTCTAAAGTGTCTGCCCGAATGTTGGCACCCGTGGCATCGGAACATTGTCCATGGGTTTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS CCA 72 bp AGAATTCGGTATCTATCCAGCATTGCCTGGTTGTCATaGCAGCCTGCCAATAACTGCCATACCTCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: RIRYLSSIAWLS*QPANNCHTSAL
Trigger: GAGGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATACCGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000526253.1
ENST00000681986.1
CDS GCA 72 bp GAGAAAGATGGATCTCTTATCCACAATATTAAGAACTaGGGTGGGAGGGGAGCCAGGTTTAGGTCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: EKDGSLIHNIKN*GGRGARFRSPW
Trigger: CCAGGGAGACCTAAACCTGGCTCCCCTCCCACCGCAGTTCTTAATATTGTGGATAAGAGATCCATCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS CCA 72 bp AGGTCTCCCTGGGAGGACGTACAAGCCAGTCTGTGGTaGGAATTGTCAGCTAATGTCTCCACAAGAAAAACA +
Preference number: 6 (lower is better)
Translates to: RSPWEDVQASLW*ELSANVSTRKT
Trigger: TGTTTTTCTTGTGGAGACATTAGCTGACAATTCCCACCACAGACTGGCTTGTACGTCCTCCCAGGGAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS TCA 72 bp CATTCGGGCAGACACTTTAGAAAGTCACCATCCCAGTaGACTGAAGGGCAGAGATACCACTCTCACAAAGCA +
Preference number: 6 (lower is better)
Translates to: HSGRHFRKSPSQ*TEGQRYHSHKA
Trigger: TGCTTTGTGAGAGTGGTATCTCTGCCCTTCAGTTCACTGGGATGGTGACTTTCTAAAGTGTCTGCCCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS GCA 72 bp AGGATCAGGCAGCAACATTTGCCATTCTGCAATATTTaGTGTTCTGCAGCTTCCACTGGTGATACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: RIRQQHLPFCNI*CSAASTGDTQA
Trigger: TGCCTGGGTATCACCAGTGGAAGCTGCAGAACAGCAAATATTGCAGAATGGCAAATGTTGCTGCCTGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS GCA 72 bp GTGCCAGTGTACACACCCACTTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCATTTTCCTCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: VPVYTPTLILQA*SISLLAFSSAL
Trigger: CAGGGCAGAGGAAAATGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAAAGTGGGTGTGTACACTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS CCA 72 bp TTTAGGTCTCCCTGGGAGGACGTACAAGCCAGTCTGTaGTGGGAATTGTCAGCTAATGTCTCCACAAGAAAA +
Preference number: 6 (lower is better)
Translates to: FRSPWEDVQASL*WELSANVSTRK
Trigger: TTTTCTTGTGGAGACATTAGCTGACAATTCCCACCACAGACTGGCTTGTACGTCCTCCCAGGGAGACCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489615.5
CDS CAA 72 bp TGTCAGACTCTCGCTGTAGACTCACCACCTCATATATaGCATCTCCAGCATTGGTATGGCCTTTTCCCTCAG +
Preference number: 6 (lower is better)
Translates to: CQTLAVDSPPHI*HLQHWYGLFPQ
Trigger: CTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS CAA 72 bp CCTGTAATCTTCGGTTCTCCCTCTTGTATCTATCCATaGGGTCTTCCTGTTGCAGCTGACTCTCTCGCATTG +
Preference number: 6 (lower is better)
Translates to: PVIFGSPSCIYP*GLPVAADSLAL
Trigger: CAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGAGGGAGAACCGAAGATTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000465412.5
ENST00000489615.5
ENST00000681986.1
CDS TCA 72 bp TTAGACACCTACGGATCCCCTGGCAGTTCATATCAATaGGCTCCTACTAGCATCTTCTGCTCTCACATTCCA +
Preference number: 6 (lower is better)
Translates to: LDTYGSPGSSYQ*APTSIFCSHIP
Trigger: TGGAATGTGAGAGCAGAAGATGCTAGTAGGAGCTCATTGATATGAACTGCCAGGGGATCCGTAGGTGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529145.6
CDS GCA 72 bp AACAGGCTCCACCACCTCTGTGACTACCATATCCACTaGCACAGTCATGTATACTTGCTTATCTTTTGGGGT +
Preference number: 6 (lower is better)
Translates to: NRLHHLCDYHIH*HSHVYLLIFWG
Trigger: ACCCCAAAAGATAAGCAAGTATACATGACTGTGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS GCA 72 bp CAGCTCCAGACCAGACTATCCAAGGAAAAATCCTACTaGAGCTCAGTGCCAGTGTACACACCCACTTTAATA +
Preference number: 6 (lower is better)
Translates to: QLQTRLSKEKSY*SSVPVYTPTLI
Trigger: TATTAAAGTGGGTGTGTACACTGGCACTGAGCTGCAGTAGGATTTTTCCTTGGATAGTCTGGTCTGGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469553.6
CDS CAA 72 bp GAAAGGGGTATTGACTGGAAGATTTCATGGTTGCCATaGCCCGTAAAGCCTCTACTTCATTACGTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: ERGIDWKISWLP*PVKPLLHYVGK
Trigger: CTTCCCCACGTAATGAAGTAGAGGCTTTACGGGCAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000635248.1
ENST00000681986.1
CDS CAA 72 bp GTGATAAGAATTCGGTATCTATCCAGCATTGCCTGGTaGTCATGGCAGCCTGCCAATAACTGCCATACCTCT +
Preference number: 6 (lower is better)
Translates to: VIRIRYLSSIAW*SWQPANNCHTS
Trigger: AGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATACCGAATTCTTATCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000526253.1
ENST00000681986.1
CDS CAA 72 bp GATGAAGCTTCCAGAGGAAGGATCAGGCAGCAACATTaGCCATTCTGCAATATTTGCTGTTCTGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: DEASRGRIRQQH*PFCNICCSAAS
Trigger: GGAAGCTGCAGAACAGCAAATATTGCAGAATGGCAAATGTTGCTGCCTGATCCTTCCTCTGGAAGCTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367690.5
CDS CAA 90 bp GACTCTCGCTGTAGACTCACCACCTCATATATTGCATCTCCAGCATaGGTATGGCCTTTTCCCTCAGACTGTTTCAATCTCATGAAGAAA +
Preference number: 6 (lower is better)
Translates to: DSRCRLTTSYIASPA*VWPFPSDCFNLMKK
Trigger: TTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAATATATGAGGTGGTGAGTCTACAGCGAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS TCA 72 bp CTCAGGACAATCCTTAGACACATCACCTGTTCCACTTaGGAGTTCATTATCACTCTCCTCTTCTGCTTCATC +
Preference number: 6 (lower is better)
Translates to: LRTILRHITCST*EFIITLLFCFI
Trigger: GATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCCTGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS GCA 72 bp GAAAGTCTTTCTGCTGAAATACCAAAATCGCTCATTTaGAGGGTACACACGGACTACTGTCTCCAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: ESLSAEIPKSLI*RVHTDYCLQEK
Trigger: TTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGGTATTTCAGCAGAAAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS GCA 72 bp TTCAGCTTCTTGGTTGGTACTTTAATATTGCAAGCCTaGTCCATCAGTCTTCTTGCATTTTCCTCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: FSFLVGTLILQA*SISLLAFSSAL
Trigger: CAGGGCAGAGGAAAATGCAAGAAGACTGATGGAGCAGGCTTGCAATATTAAAGTACCAACCAAGAAGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251507.8
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000489615.5
ENST00000529145.6
ENST00000681986.1
CDS CCA 72 bp GAGATACCACTCTCACAAAGCAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGGAACTTGGCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: EIPLSQSSKSMM*NTMQSGNLAVK
Trigger: TTTTACTGCCAAGTTCCCACTCTGCATGGTGTTCCACATCATTGACTTACTGCTTTGTGAGAGTGGTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474375.6
CDS CAA 72 bp TGTAGACTCACCACCTCATATATTGCATCTCCAGCATaGGTATGGCCTTTTCCCTCAGACTGTTTCAATCTC +
Preference number: 6 (lower is better)
Translates to: CRLTTSYIASPA*VWPFPSDCFNL
Trigger: GAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAATATATGAGGTGGTGAGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000367690.5
ENST00000457696.1
ENST00000681986.1
CDS CAA 72 bp GTTCTCCCTCTTGTATCTATCCATTGGGTCTTCCTGTaGCAGCTGACTCTCTCGCATTGTCTGATATTCTTT +
Preference number: 6 (lower is better)
Translates to: VLPLVSIHWVFL*QLTLSHCLIFF
Trigger: AAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGAGGGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000392064.6
ENST00000465412.5
ENST00000489615.5
ENST00000681986.1
CDS CAA 72 bp ATAGATTGGAAAAGATGCTATCTCCACATTGCTGGATaGGTCTATAATTCTGGCTTGGAGGGTCCTACGCCA +
Preference number: 6 (lower is better)
Translates to: IDWKRCYLHIAG*VYNSGLEGPTP
Trigger: TGGCGTAGGACCCTCCAAGCCAGAATTATAGACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529474.2
CDS CCA 72 bp CTGGAATATCTCCAAACGAATGGTCTGAAATCTCACTaGAACTTTGACAATCAACAAGAAGACTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LEYLQTNGLKSH*NFDNQQEDCLA
Trigger: GGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS CCA 72 bp ATGTTCAAACCCTCACAAAGCAGTAAGTCAATGATGTaGAACACCATGCAGAGTGGGAACTTGGCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: MFKPSQSSKSMM*NTMQSGNLAVK
Trigger: TTTTACTGCCAAGTTCCCACTCTGCATGGTGTTCCACATCATTGACTTACTGCTTTGTGAGGGTTTGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000251507.8
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000529145.6
ENST00000681986.1
CDS CCA 72 bp GTAATCAGAACATCAAGTCTAATGTCAAATTGCAGCTaGTTACAGGGTGTCATGGAGACCTTCATAGACCCT +
Preference number: 6 (lower is better)
Translates to: VIRTSSLMSNCS*LQGVMETFIDP
Trigger: AGGGTCTATGAAGGTCTCCATGACACCCTGTAACCAGCTGCAATTTGACATTAGACTTGATGTTCTGATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS TCA 72 bp TGTTTGGCTGGCTGGAATATCTCCAAACGAATGGTCTaGAATCTCACTGGAACTTTGACAATCAACAAGAAG +
Preference number: 6 (lower is better)
Translates to: CLAGWNISKRMV*NLTGTLTINKK
Trigger: CTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCAGCCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS CCA 72 bp CTCACTGGAACTTTGACAATCAACAAGAAGACTGCTTaGCCTTTTCTCGGAATCTCTCAAAATCTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: LTGTLTINKKTA*PFLGISQNLFH
Trigger: ATGGAAGAGATTTTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS TCA 72 bp TGTTTCTGTAGAGGTCTCTCAAACCATAGTCGTACATaGTTTTCACCAAAACACAGAATGCTTGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: CFCRGLSNHSRT*FSPKHRMLVPL
Trigger: CAGAGGAACAAGCATTCTGTGTTTTGGTGAAAATCATGTACGACTATGGTTTGAGAGACCTCTACAGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251507.8
ENST00000474375.6
ENST00000681986.1
CDS TCA 72 bp TCTTCCTTTGAGGTCTTTAGGAGAGCCAAAGCTACATaGAAGATTATGTTCAAACCCTCACAAAGCAGTAAG +
Preference number: 6 (lower is better)
Translates to: SSFEVFRRAKAT*KIMFKPSQSSK
Trigger: CTTACTGCTTTGTGAGGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCTCCTAAAGACCTCAAAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000251507.8
ENST00000325589.9
ENST00000347255.6
ENST00000367687.5
ENST00000469553.6
ENST00000529145.6
ENST00000681986.1
CDS CAA 72 bp TACATAGTCTTTTTCCTCCTTAATGCCCATTTGTCATaGTACTTATGGCTCGTTTTACATCCCTGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: YIVFFLLNAHLS*YLWLVLHPCLL
Trigger: AAGGAGGCAGGGATGTAAAACGAGCCATAAGTACAATGACAAATGGGCATTAAGGAGGAAAAAGACTATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325589.9
ENST00000529145.6
CDS CAA 90 bp GGAATAACTGAGTCTTTAACATCAGACACTTGTCTGGAAGAACGTTaGAATGCTGTACAGAAACTGTACAAAATTCTGCTTACTGCCTCT +
Preference number: 6 (lower is better)
Translates to: GITESLTSDTCLEER*NAVQKLYKILLTAS
Trigger: AGAGGCAGTAAGCAGAATTTTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000681986.1
CDS GCA 72 bp AAATCTCACTGGAACTTTGACAATCAACAAGAAGACTaGTTGGCCTTTTCTCGGAATCTCTCAAAATCTCTT +
Preference number: 6 (lower is better)
Translates to: KSHWNFDNQQED*LAFSRNLSKSL
Trigger: AAGAGATTTTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS CAA 72 bp AGTATAAGTAATCAGAACATCAAGTCTAATGTCAAATaGCAGCTGGTTACAGGGTGTCATGGAGACCTTCAT +
Preference number: 6 (lower is better)
Translates to: SISNQNIKSNVK*QLVTGCHGDLH
Trigger: ATGAAGGTCTCCATGACACCCTGTAACCAGCTGCAATTTGACATTAGACTTGATGTTCTGATTACTTATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS CAA 90 bp AAAACAAAAAGTATAAGTAATCAGAACATCAAGTCTAATGTCAAATaGCAGCTGGTTACAGGGTGTCATGGAGACCTTCATAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: KTKSISNQNIKSNVK*QLVTGCHGDLHRPF
Trigger: GAAGGGTCTATGAAGGTCTCCATGACACCCTGTAACCAGCTGCAATTTGACATTAGACTTGATGTTCTGATTACTTATACTTTTTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357444.10
CDS TCA 72 bp GTAGAAATTTCTGTGTTAGACGGATCCAAAATTAACTaGAGAGATGGCTTATTTGTTTGGCTGGCTGGAATA +
Preference number: 6 (lower is better)
Translates to: VEISVLDGSKIN*RDGLFVWLAGI
Trigger: TATTCCAGCCAGCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000487987.1
ENST00000635248.1
ENST00000681986.1
CDS GCA 72 bp TTTAACATCAGACACTTGTCTGGAAGAACGTTTGAATaGTGTACAGAAACTGTACAAAATTCTGCTTACTGC +
Preference number: 6 (lower is better)
Translates to: FNIRHLSGRTFE*CTETVQNSAYC
Trigger: GCAGTAAGCAGAATTTTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000681986.1
CDS CAA 72 bp ATAGATTGGAAAAGATGCTATCTCCACATTGCTGGATaGGTCTATAATTCTCACAGAACCTTCTGGAACATT +
Preference number: 6 (lower is better)
Translates to: IDWKRCYLHIAG*VYNSHRTFWNI
Trigger: AATGTTCCAGAAGGTTCTGTGAGAATTATAGACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000635248.1
ENST00000681986.1
CDS CAA 72 bp GGAATCTCTCAAAATCTCTTCCATGGCTTTTTCCAATaGTTCATCACCATTAGAAACTATCTACAGACACAG +
Preference number: 6 (lower is better)
Translates to: GISQNLFHGFFQ*FITIRNYLQTQ
Trigger: CTGTGTCTGTAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATTTTGAGAGATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487987.1
CDS GCA 72 bp CATCTTTCAATAGCTAATTCTTTGTTAGAAAGTTGCTaGACTGTAATCACAACCTTCTTCTCTATTCCTTGC +
Preference number: 6 (lower is better)
Translates to: HLSIANSLLESC*TVITTFFSIPC
Trigger: GCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251507.8
ENST00000357444.10
ENST00000457696.1
ENST00000681986.1