RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RABGAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000011454

Ensembl transcript IDs: ENST00000317419.7, ENST00000373647.9, ENST00000402311.5, ENST00000426918.2, ENST00000456584.5, ENST00000459903.5, ENST00000475607.1, ENST00000480054.1, ENST00000493854.5

Found 422 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTACCCAGGCATACTCTGAGGAGGGCCCAAAGGCCCAGCCCATCTaGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCAC +
Preference number: 1 (lower is better)
Translates to: CTQAYSEEGPKAQPI*EGQARRMETSQHVH
Trigger: GTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGGGCTGGGCCTTTGGGCCCTCCTCAGAGTATGCCTGGGTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CCA 90 bp AGGGCCCAAAGGCCCAGCCCATCTGGGAGGGACAGGCCCGGAGGATaGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACA +
Preference number: 1 (lower is better)
Translates to: RAQRPSPSGRDRPGG*RPRSMCTLRRHLQT
Trigger: TGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGGGCTGGGCCTTTGGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTaGACCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTC +
Preference number: 1 (lower is better)
Translates to: PSGRDRPGGWRPRSM*TLRRHLQTRNSVFL
Trigger: GAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 90 bp GGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTaGGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGA +
Preference number: 1 (lower is better)
Translates to: GGTGPEDGDLAACAP*ADIYRHATQSFSLG
Trigger: TCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR TCA 90 bp CTCACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTaGGGGAGCTCTGTCCACAGCTCCCGTAATGGCAGGGAGGAGAGC +
Preference number: 1 (lower is better)
Translates to: LTWTTCCAKTLGILK*GSSVHSSRNGREES
Trigger: GCTCTCCTCCCTGCCATTACGGGAGCTGTGGACAGAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 90 bp GCTAGCAGGCCTGTTAGTATCAGTAGTCTTACCCCAGAGGTTGCCTaGTTCACAAGCTCTGGTCCAGTGACCTACCAACATGCGTCTATG +
Preference number: 1 (lower is better)
Translates to: ASRPVSISSLTPEVA*FTSSGPVTYQHASM
Trigger: CATAGACGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACTGATACTAACAGGCCTGCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 90 bp AGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCAACATaGGTCTATGGATCTGACTTAGGTACATTCTGGTCCTGGGACAAG +
Preference number: 1 (lower is better)
Translates to: RGCLLHKLWSSDLPT*VYGSDLGTFWSWDK
Trigger: CTTGTCCCAGGACCAGAATGTACCTAAGTCAGATCCATAGACGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 90 bp CTGCCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTaGTGGTCACCAGCTCATGGGCTAAGTCATCGTTTTCCTGTTCCA +
Preference number: 1 (lower is better)
Translates to: LPFPQRYPGPSVVQS*WSPAHGLSHRFPVP
Trigger: TGGAACAGGAAAACGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGAGGAAAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CCA 90 bp CCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTaGTCACCAGCTCATGGGCTAAGTCATCGTTTTCCTGTTCCAACC +
Preference number: 1 (lower is better)
Translates to: PFPQRYPGPSVVQSC*SPAHGLSHRFPVPT
Trigger: GGTTGGAACAGGAAAACGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGAGGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR GCA 90 bp TTTATGGAGCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTaGACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGT +
Preference number: 1 (lower is better)
Translates to: FMELSVRLNHVFLAA*TSLRASPKWCSKSC
Trigger: ACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGCTCCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CCA 90 bp CACTGGGAGGCATACATGTGTGCTTCAAGGCTTATATCCAGGAAGTaGTTGTACAGGTCAGGAATGTATTCCTGCATGAGGCGCTCCAAC +
Preference number: 1 (lower is better)
Translates to: HWEAYMCASRLISRK*LYRSGMYSCMRRSN
Trigger: GTTGGAGCGCCTCATGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAGCACACATGTATGCCTCCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CCA 90 bp AGTGACCTACCAACATGCGTCTATGGATCTGACTTAGGTACATTCTaGTCCTGGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGG +
Preference number: 1 (lower is better)
Translates to: SDLPTCVYGSDLGTF*SWDKSQNHTSGQRR
Trigger: CCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCCAGGACCAGAATGTACCTAAGTCAGATCCATAGACGCATGTTGGTAGGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CCA 90 bp CTACCAACATGCGTCTATGGATCTGACTTAGGTACATTCTGGTCCTaGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAA +
Preference number: 1 (lower is better)
Translates to: LPTCVYGSDLGTFWS*DKSQNHTSGQRRQQ
Trigger: TTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCCAGGACCAGAATGTACCTAAGTCAGATCCATAGACGCATGTTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 90 bp TTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTaGAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCTGTCCACAG +
Preference number: 1 (lower is better)
Translates to: FTDTQLSLSHLDNLL*KNTRNLEVRELCPQ
Trigger: CTGTGGACAGAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR TCA 90 bp CCTTCAGACACATTCGGCACTGAAAGGGTAACATCTAGTGAAATCTaGCACTGGCTTCTTAAGATGGACATCATCCTTAAGGCTTCCACT +
Preference number: 1 (lower is better)
Translates to: PSDTFGTERVTSSEI*HWLLKMDIILKAST
Trigger: AGTGGAAGCCTTAAGGATGATGTCCATCTTAAGAAGCCAGTGTCAGATTTCACTAGATGTTACCCTTTCAGTGCCGAATGTGTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR GCA 90 bp AGCTTCTTGTATTTCACACCGGAAGACGTGTATTCTGAAGAGCTCTaGATTGTAATGACTTTCAGTGAAAGCAAAACAGTCACTCTCAGG +
Preference number: 1 (lower is better)
Translates to: SFLYFTPEDVYSEEL*IVMTFSESKTVTLR
Trigger: CCTGAGAGTGACTGTTTTGCTTTCACTGAAAGTCATTACAATGCAGAGCTCTTCAGAATACACGTCTTCCGGTGTGAAATACAAGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR GCA 90 bp ACCTTGAGTGAAATTAAGTGCTCGAATAACCACATAATTAAATTGTaGAGATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGG +
Preference number: 1 (lower is better)
Translates to: TLSEIKCSNNHIIKL*RSAVLVWNLNTVNG
Trigger: CCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTTAATTTCACTCAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CCA 90 bp TCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTaGAATTTAAACACTGTCAACGGGGCATATTGGGAAAGATATTTA +
Preference number: 1 (lower is better)
Translates to: SNNHIIKLCRSAVLV*NLNTVNGAYWERYL
Trigger: TAAATATCTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGGTCCAGAGCGTCGGCTaGGCTAGCAGGCCTGTTAGT +
Preference number: 2 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLVQSVG*ASRPVS
Trigger: ACTAACAGGCCTGCTAGCTCAGCCGACGCTCTGGAC...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCACGGGGAAGAGGCCTaGGAGGTCACACTGAGGAGT +
Preference number: 2 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLHGEEA*EVTLRS
Trigger: ACTCCTCAGTGTGACCTCCCAGGCCTCTTCCCCGTG...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGGGCTGGGTGAGGTGTTaGCGTACACGGGGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: GDLAACAPCADIYRHATQGWVRC*RTRGRG
Trigger: GCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCC...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGAGGTGTCGTGTTTTCTaGAGGTGTCGGGAGGCGGCA +
Preference number: 2 (lower is better)
Translates to: GDLAACAPCADIYRHATQRCRVF*RCREAA
Trigger: TGCCGCCTCCCGACACCTTCAGAAAACACGACACCT...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGACCTTCTGCTGGCATTaGAGCAGAAAAGAATTATTT +
Preference number: 2 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLTFCWH*SRKELF
Trigger: AAATAATTCTTTTCTGCTTCAATGCCAGCAGAAGGT...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGCCCACCCCAGCCTTTTaGAGTCATTTGGCAGCTAAT +
Preference number: 2 (lower is better)
Translates to: GDLAACAPCADIYRHATQPTPAF*SHLAAN
Trigger: ATTAGCTGCCAAATGACTTCAAAAGGCTGGGGTGGG...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACAATTATTTGAATTTCTaGTCCCTTGCCCCACCCCCA +
Preference number: 2 (lower is better)
Translates to: PEDGDLAACAPCADIYRHNYLNF*SLAPPP
Trigger: TGGGGGTGGGGCAAGGGATCAGAAATTCAAATAATT...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTGCTTCACAAGCTCTaGTCCAGTGACCTACCAACA +
Preference number: 2 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQLLHKL*SSDLPT
Trigger: TGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAG...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CAA 90 bp TCTGCCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTaGCTGGTCACCAGCTCATGGGCTAAGTCATCGTTTTCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: SAFSSALSRSFRSAI*LVTSSWAKSSFSCS
Trigger: GGAACAGGAAAACGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGAGGAAAAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 90 bp GTTGCTGTCTTTATGGAGCTCAGTGTTCGGTTAAACCACGTCTTCTaGGCTGCCTGCACCTCATTGAGGGCAAGCCCTAAATGGTGTTCC +
Preference number: 2 (lower is better)
Translates to: VAVFMELSVRLNHVF*AACTSLRASPKWCS
Trigger: GGAACACCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGCTCCATAAAGACAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 90 bp TGGGAGGCATACATGTGTGCTTCAAGGCTTATATCCAGGAAGTGGTaGTACAGGTCAGGAATGTATTCCTGCATGAGGCGCTCCAACTGG +
Preference number: 2 (lower is better)
Translates to: WEAYMCASRLISRKW*YRSGMYSCMRRSNW
Trigger: CCAGTTGGAGCGCCTCATGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAGCACACATGTATGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR GCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCACCCCAGAGGTTGCCTaGTTCACAAGCTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELTPEVA*FTSSGP
Trigger: TGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGT...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR GCA 90 bp TCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGGCCTCAGGAATGTATTCCTaGATGAGGCGCTCCAACTGG +
Preference number: 2 (lower is better)
Translates to: SLRASPKWCSKSCILHSASGMYS*MRRSNW
Trigger: CCAGTTGGAGCGCCTCATGCAGGAATACATTCCTGA...GGCCGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CCA 90 bp TCAGTGAAAGCAAAACAGTCACTCTCAGGAGTTCCATCATGCCCTCTGACACAGCTTCCACTTCACTCCTaGGAGCATTTACCGAGGCAC +
Preference number: 2 (lower is better)
Translates to: SVKAKQSLSGVPSCPLTQLPLHS*EHLPRH
Trigger: GTGCCTCGGTAAATGCTCCCAGGAGTGAAGTGGAAG...CTGTGTCAGAGGGCATGATGGAACTCCTGAGAGTGACTGTTTTGCTTTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR TCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCCAAGCTCTGGTCCAGTaGCCTACCAACATGCGTCTA +
Preference number: 2 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELQALVQ*PTNMRL
Trigger: TAGACGCATGTTGGTAGGTCACTGGACCAGAGCTTG...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAAACAGAATCACACATCTaGCCAAAGAAGGCAACAAAA +
Preference number: 2 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQTESHI*PKKATK
Trigger: TTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGT...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CCA 90 bp TCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTGGTCACCAGCTCATGGCTGACATCACCTGTGTaGTATTCTTGCCAAGCATTT +
Preference number: 2 (lower is better)
Translates to: SALSRSFRSAILLVTSSWLTSPV*YSCQAF
Trigger: AAATGCTTGGCAAGAATACCACACAGGTGATGTCAG...CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCGGTCACACTGAGGAGTaGTTTCTAGAGTGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELGHTEE*FLECPE
Trigger: CTCTGGACACTCTAGAAATCACTCCTCAGTGTGACC...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACAGAAAAGAATTATTTaGATTTCTGATCCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQQKRII*ISDPLP
Trigger: GGGCAAGGGATCAGAAATTCAAATAATTCTTTTCTG...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGAATGTATTCCTGCATaGGGCGCTCCAACTGGTAAA +
Preference number: 2 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTECIPA*GAPTGK
Trigger: TTTACCAGTTGGAGCGCCTCATGCAGGAATACATTC...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CCA 90 bp ATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGGGCATATTGGGAAAGTTCTCCATGTCTACCTaGGGGACCTTCTGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: ISSPSLEFKHCQRGILGKFSMST*GTFCWH
Trigger: ATGCCAGCAGAAGGTCCCCCAGGTAGACATGGAGAA...CTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CCA 90 bp CTCCCCGTAATAACATACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAATCTGGGGTGCAGCAGTaGCTGAAAGTGGGGTCTGCT +
Preference number: 2 (lower is better)
Translates to: LPVITYDFPSELLPIDSKSGVQQ*LKVGSA
Trigger: AGCAGACCCCACTTTCAGCCACTGCTGCACCCCAGA...TTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTATGTTATTACGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR CCA 90 bp ATTCCCGGCACCGCTCACAGTCATCCACTTTTTGCCGAATTTTCTCAATTTCCAGTAGTGCAATCTTGCTaGTCACCAGCTCATGGGCTA +
Preference number: 2 (lower is better)
Translates to: IPGTAHSHPLFAEFSQFPVVQSC*SPAHGL
Trigger: TAGCCCATGAGCTGGTGACCAGCAAGATTGCACTAC...TGGAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGTGAGCGGTGCCGGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 90 bp CACCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTaGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: HPAQTFTDTQLSLSH*DNLLCKNTRNLEVR
Trigger: CCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp TACTCAAAACTCTTTGCTGACATCACCTGTGTGGTATTCTTGCCAAGCATTTTAAGGTGTCGTGTTTTCTaGAGGTGTCGGGAGGCGGCA +
Preference number: 2 (lower is better)
Translates to: YSKLFADITCVVFLPSILRCRVF*RCREAA
Trigger: TGCCGCCTCCCGACACCTTCAGAAAACACGACACCT...TAAAATGCTTGGCAAGAATACCACACAGGTGATGTCAGCAAAGAGTTTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTGAGAGCAGAGCCCAATaGACCTTGAGTGAAATTAAG +
Preference number: 2 (lower is better)
Translates to: ERRKEDKTICVSACQHITESRAQ*TLSEIK
Trigger: CTTAATTTCACTCAAGGTTCATTGGGCTCTGCTCTC...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR TCA 90 bp TCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGGCCCTCAAAACTCTTTGCTaGCATCACCTGTGTGGTATT +
Preference number: 2 (lower is better)
Translates to: SLRASPKWCSKSCILHSALKTLC*HHLCGI
Trigger: AATACCACACAGGTGATGTCAGCAAAGAGTTTTGAG...GGCCGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR GCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTAGTGACCTACCAACATaGGTCTATGGATCTGACTTA +
Preference number: 2 (lower is better)
Translates to: PCADIYRHATQSFSLGQPSDLPT*VYGSDL
Trigger: TAAGTCAGATCCATAGACGCATGTTGGTAGGTCACT...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCGACTTAGGTACATTCTaGTCCTGGGACAAGTCACAG +
Preference number: 2 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELDLGTF*SWDKSQ
Trigger: CTGTGACTTGTCCCAGGACCAGAATGTACCTAAGTC...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CCA 90 bp TCTGCTTGGCAGAACGGCGGAAGGCAGTGGCAAAACTGTAAAGTATCCGGCTTAACTGGCTTCTTAAGATaGACATCATCCTTAAGGCTT +
Preference number: 2 (lower is better)
Translates to: SAWQNGGRQWQNCKVSGLTGFLR*TSSLRL
Trigger: AAGCCTTAAGGATGATGTCCATCTTAAGAAGCCAGT...TAAGCCGGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTTCTGCCAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR CCA 90 bp ATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCACCTGCTGTTCCCTCATaGTGTGATATTCTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: MPFTRPSLLKNSRHRSQSPAVPS*CDILSR
Trigger: ACGAGAAAGAATATCACACCATGAGGGAACAGCAGG...TGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp CCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCATCCTTTTGCATTTTCTTCTaGGCGGTATCTCTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: PFTRPSLLKNSRHRSQSSFCIFF*AVSLRK
Trigger: CTTCCTAAGAGATACCGCTCAGAAGAAAATGCAAAA...GGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGCACATTTCTTTTAACTaGGCAGACTCTTCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQHISFN*ADSSSS
Trigger: GCTGGAAGAAGAGTCTGCTCAGTTAAAAGAAATGTG...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR GCA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTGCCAAACCCAAAACCTaGACCATACAGTTTAACAGA +
Preference number: 2 (lower is better)
Translates to: ERRKEDKTICVSACQHITAKPKT*TIQFNR
Trigger: TCTGTTAAACTGTATGGTGCAGGTTTTGGGTTTGGC...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR GCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGCTTATTCAGAGCATCTaGCTTTTCCTCAGCGTTATC +
Preference number: 2 (lower is better)
Translates to: TSLRASPKWCSKSCILHSLIQSI*LFLSVI
Trigger: GATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAG...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR GCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTTATTGGCTGTCTGCTaGTTCTCCAATCTTTCACTC +
Preference number: 2 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQLLAVC*FSNLSL
Trigger: GAGTGAAAGATTGGAGAAGCAGCAGACAGCCAATAA...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 90 bp ACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTaGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: TFTDTQLSLSHLDNL*CKNTRNLEVRELCP
Trigger: TGGACAGAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CAA 90 bp TCTTCCAGCCGTCTTTTCTCTTCTTCTGCATCAATCAACTTCTGTTaGGTCATCAGCAGCTCCTTATTCAGAGCATCTGCCTTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SSSRLFSSSASINFC*VISSSLFRASAFSS
Trigger: TGAGGAAAAGGCAGATGCTCTGAATAAGGAGCTGCTGATGACCAAACAGAAGTTGATTGATGCAGAAGAAGAGAAAAGACGGCTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp TCAGTGAAAGCAAAACAGTCACTCTCAGGAGTTCCATCATGCCCTCTGACACAGACATCTAGTGAAATCTaGCACTGGCTTCTTAAGATG +
Preference number: 2 (lower is better)
Translates to: SVKAKQSLSGVPSCPLTQTSSEI*HWLLKM
Trigger: CATCTTAAGAAGCCAGTGTCAGATTTCACTAGATGT...CTGTGTCAGAGGGCATGATGGAACTCCTGAGAGTGACTGTTTTGCTTTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR TCA 90 bp CCTTATTCAGAGCATCTGCCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGCACAGAATAAGCCTTTaGCTTTGCAATGTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: PYSEHLPFPQRYPGPSVVHRISL*LCNVFS
Trigger: AGAAAAGACATTGCAAAGTCAAAGGCTTATTCTGTG...CACTACGGAAGGACCTGGATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp CTTCAAGGCTTATATCCAGGAAGTGGTTGTACAGGTCAGGAATGTATTCCTGCATTCTTCAGGCATCTCTaGTCTTCAGCACAGTACAGA +
Preference number: 2 (lower is better)
Translates to: LQGLYPGSGCTGQECIPAFFRHL*SSAQYR
Trigger: TCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGAA...TGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp ATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCAATAAAAGCAGGTCGATaGTATGGAAGACCATGTAGA +
Preference number: 2 (lower is better)
Translates to: MPFTRPSLLKNSRHRSQSIKAGR*YGRPCR
Trigger: TCTACATGGTCTTCCATATCATCGACCTGCTTTTAT...TGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp CCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCATCCTGTTCCCTCATGGTGTaGTATTCTTTCTCGTATTTT +
Preference number: 2 (lower is better)
Translates to: PFTRPSLLKNSRHRSQSSCSLMV*YSFSYF
Trigger: AAAATACGAGAAAGAATATCACACCATGAGGGAACA...GGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR GCA 90 bp TCAGTGAAAGCAAAACAGTCACTCTCAGGAGTTCCATCATGCCCTCTGACACAGGTAGATAGGGTAGTTTaGTATTTCAGTGTTTGTCTG +
Preference number: 2 (lower is better)
Translates to: SVKAKQSLSGVPSCPLTQVDRVV*YFSVCL
Trigger: CAGACAAACACTGAAATAGCAAACTACCCTATCTAC...CTGTGTCAGAGGGCATGATGGAACTCCTGAGAGTGACTGTTTTGCTTTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR GCA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCGACCAGAACACTGAATaGCTGTTCTTCAGGCATCTC +
Preference number: 2 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIIDQNTE*LFFRHL
Trigger: GAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGTC...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CCA 90 bp CTCCCCGTAATAACATACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAAAACGGCGGAAGGCAGTaGCAAAACTGTAAAGTATCC +
Preference number: 2 (lower is better)
Translates to: LPVITYDFPSELLPIDSKNGGRQ*QNCKVS
Trigger: GGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTT...TTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTATGTTATTACGGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR CCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGCATCTAAAACCTCCTTaGTTGAGCTTATGCCTTTTA +
Preference number: 2 (lower is better)
Translates to: TSLRASPKWCSKSCILHSHLKPP*LSLCLL
Trigger: TAAAAGGCATAAGCTCAACCAAGGAGGTTTTAGATG...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR GCA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCAGGAGGCATACATGTGTaGTTCAAGGCTTATATCCAG +
Preference number: 2 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPGGIHV*FKAYIQ
Trigger: CTGGATATAAGCCTTGAAGCACACATGTATGCCTCC...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR TCA 90 bp ACTAAGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGTTCCATCATGCCCTCTaGCACAGAAGAGGATTTTGT +
Preference number: 2 (lower is better)
Translates to: TKEKTKTPFNGKFFISCLFHHAL*HRRGFC
Trigger: ACAAAATCCTCTTCTGTGTCAGAGGGCATGATGGAA...CAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR TCA 90 bp ACTAAGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGGGAAGACGTGTATTCTaGAGAGCTCTGCATTGTAAT +
Preference number: 2 (lower is better)
Translates to: TKEKTKTPFNGKFFISCLGRRVF*RALHCN
Trigger: ATTACAATGCAGAGCTCTTCAGAATACACGTCTTCC...CAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR TCA 90 bp TACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAATCTAATAAGTGCATGTGTAATGACTTTCAGTaGAAGCAAAACAGTCACTCT +
Preference number: 2 (lower is better)
Translates to: YDFPSELLPIDSKSNKCMCNDFQ*KQNSHS
Trigger: AGAGTGACTGTTTTGCTTTCACTGAAAGTCATTACA...CATGCACTTATTAGATTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR CCA 90 bp AGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCTGCTTCTTATCAATTCCTTaGCGTAGTTTAAAGCACTGT +
Preference number: 2 (lower is better)
Translates to: RRRPKHLSMASSLLVVCCFLSIP*RSLKHC
Trigger: ACAGTGCTTTAAACTACGCCAAGGAATTGATAAGAA...GCAGCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR CAA 90 bp ATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGGGCATATaGGGAAAGATATTTATATATATATATACATACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: ISSPSLEFKHCQRGI*GKIFIYIYTYTHTH
Trigger: GTGTGTGTGTGTGTATGTATATATATATATAAATATCTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR GCA 90 bp TACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAATCTAATAAGTGCATGCTTATCTTTGGGAACTaGACTAAAATAACCTTTACC +
Preference number: 2 (lower is better)
Translates to: YDFPSELLPIDSKSNKCMLIFGN*TKITFT
Trigger: GGTAAAGGTTATTTTAGTGCAGTTCCCAAAGATAAG...CATGCACTTATTAGATTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR GCA 72 bp AGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTaGACCCTGCGCAGACATTTACAGACACGCAACTCA +
Preference number: 3 (lower is better)
Translates to: RDRPGGWRPRSM*TLRRHLQTRNS
Trigger: TGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 72 bp GGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTaGGCAGACATTTACAGACACGCAACTCAGTCTTTC +
Preference number: 3 (lower is better)
Translates to: GPEDGDLAACAP*ADIYRHATQSF
Trigger: GAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CCA 72 bp TTGGCTGCCTGCACCTCATTGAGGGCAAGCCCTAAATaGTGTTCCAAGTCCTGTATCTTACACTCGGCCTCC +
Preference number: 3 (lower is better)
Translates to: LAACTSLRASPK*CSKSCILHSAS
Trigger: GGAGGCCGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACCTCAGTCTTTCTCACTaGGACAACCTGTTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: PEDGDLAACAPCADIYRHLSLSH*DNLLCK
Trigger: TTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAG...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CAA 90 bp ATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCACTCGATGGGGTCTTCTaGCTGGGCCTGCTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: MPFTRPSLLKNSRHRSQSLDGVF*LGLLFP
Trigger: AGGGAACAGCAGGCCCAGCAAGAAGACCCCATCGAG...TGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR GCA 72 bp CTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTaGACCTCATTGAGGGCAAGCCCTAAATGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: LSVRLNHVFLAA*TSLRASPKWCS
Trigger: GGAACACCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTCTTACCCCAGAGGTaGCCTGCTTCACAAGCTCTG +
Preference number: 3 (lower is better)
Translates to: PCADIYRHATQSFSLGQPVLPQR*PASQAL
Trigger: CAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGAC...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CAA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTATATCCAGGAAGTGGTaGTACAGGTCAGGAATGTAT +
Preference number: 3 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVISRKW*YRSGMY
Trigger: ATACATTCCTGACCTGTACAACCACTTCCTGGATAT...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR GCA 72 bp CCTCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTaGTGGTCACCAGCTCATGGGCTAAGTCATCGTTTT +
Preference number: 3 (lower is better)
Translates to: PQRYPGPSVVQS*WSPAHGLSHRF
Trigger: AAAACGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CCA 72 bp CAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTaGTCACCAGCTCATGGGCTAAGTCATCGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: QRYPGPSVVQSC*SPAHGLSHRFP
Trigger: AGGAAAACGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACACTTGGACAACCTGTaGTGCAAAAACACTAGGAAT +
Preference number: 3 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQHLDNL*CKNTRN
Trigger: ATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CAA 90 bp TCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTGGTCACCAGCTCATGGTCTTCGAAGTTTTGCTaGAAAAGTTCCCTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: SALSRSFRSAILLVTSSWSSKFC*KSSLSP
Trigger: TGGGCTCAGGGAACTTTTCAAGCAAAACTTCGAAGA...CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp GCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTGCACCTCATTGAGGGCCTAAAACCTCCTTGGTaGAGCTTATGCCTTTTACAC +
Preference number: 3 (lower is better)
Translates to: AQCSVKPRLLGCLHLIEGLKPPW*SLCLLH
Trigger: GTGTAAAAGGCATAAGCTCAACCAAGGAGGTTTTAG...GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR TCA 72 bp ACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTaGGGGAGCTCTGTCCACAGCTCCCGTAATGGCAGG +
Preference number: 3 (lower is better)
Translates to: TTCCAKTLGILK*GSSVHSSRNGR
Trigger: CCTGCCATTACGGGAGCTGTGGACAGAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 72 bp CTGCTTCACAAGCTCTGGTCCAGTGACCTACCAACATaGGTCTATGGATCTGACTTAGGTACATTCTGGTCC +
Preference number: 3 (lower is better)
Translates to: LLHKLWSSDLPT*VYGSDLGTFWS
Trigger: GGACCAGAATGTACCTAAGTCAGATCCATAGACGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 72 bp CCTGTTAGTATCAGTAGTCTTACCCCAGAGGTTGCCTaGTTCACAAGCTCTGGTCCAGTGACCTACCAACAT +
Preference number: 3 (lower is better)
Translates to: PVSISSLTPEVA*FTSSGPVTYQH
Trigger: ATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACTGATACTAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CAA 90 bp GCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTGCACCTCATTGAGGGCTCATCTAAAACCTCCTaGGTTGAGCTTATGCCTTTT +
Preference number: 3 (lower is better)
Translates to: AQCSVKPRLLGCLHLIEGSSKTS*VELMPF
Trigger: AAAAGGCATAAGCTCAACCAAGGAGGTTTTAGATGA...GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CCA 72 bp CCAACATGCGTCTATGGATCTGACTTAGGTACATTCTaGTCCTGGGACAAGTCACAGAATCACACATCTGGC +
Preference number: 3 (lower is better)
Translates to: PTCVYGSDLGTF*SWDKSQNHTSG
Trigger: GCCAGATGTGTGATTCTGTGACTTGTCCCAGGACCAGAATGTACCTAAGTCAGATCCATAGACGCATGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CCA 72 bp AGATGGACATCATCCTTAAGGCTTCCACTTCACTCCTaGGAGCATTTACCGAGGCACAGCCTAAGTAAGTCA +
Preference number: 3 (lower is better)
Translates to: RWTSSLRLPLHS*EHLPRHSLSKS
Trigger: TGACTTACTTAGGCTGTGCCTCGGTAAATGCTCCCAGGAGTGAAGTGGAAGCCTTAAGGATGATGTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR CAA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACATCAATTTCCACCTTATaGGCTGTCTGCTGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTSISTL*AVCCFS
Trigger: GGAGAAGCAGCAGACAGCCAATAAGGTGGAAATTGA...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp TACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAATCTAATAAGTGCATGGAAAGTGGGGTCTGCTaGGCAGAACGGCGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: YDFPSELLPIDSKSNKCMESGVC*AERRKA
Trigger: TGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTTC...CATGCACTTATTAGATTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR TCA 72 bp TGGTTGAGCTTATGCCTTTTACACGCCCTTCTTTGTTaGAAAATTCCCGGCACCGCTCACAGTCATCCACTT +
Preference number: 3 (lower is better)
Translates to: WLSLCLLHALLC*KIPGTAHSHPL
Trigger: AAGTGGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGCTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CCA 72 bp TGCGTCTATGGATCTGACTTAGGTACATTCTGGTCCTaGGACAAGTCACAGAATCACACATCTGGCCAAAGA +
Preference number: 3 (lower is better)
Translates to: CVYGSDLGTFWS*DKSQNHTSGQR
Trigger: TCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCCAGGACCAGAATGTACCTAAGTCAGATCCATAGACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR-3UTR CAA 90 bp ATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCATCAATCAACTTCTGTTaGGTCATCAGCAGCTCCTTA +
Preference number: 3 (lower is better)
Translates to: MPFTRPSLLKNSRHRSQSSINFC*VISSSL
Trigger: TAAGGAGCTGCTGATGACCAAACAGAAGTTGATTGA...TGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CCA 72 bp GCATACATGTGTGCTTCAAGGCTTATATCCAGGAAGTaGTTGTACAGGTCAGGAATGTATTCCTGCATGAGG +
Preference number: 3 (lower is better)
Translates to: AYMCASRLISRK*LYRSGMYSCMR
Trigger: CCTCATGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAGCACACATGTATGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp GGCGGAAGGCAGTGGCAAAACTGTAAAGTATCCGGCTTACAGCTTCTTGTATTTTTGCTATTTCAGTGTTaGTCTGAGGATCTAAGAGTC +
Preference number: 3 (lower is better)
Translates to: GGRQWQNCKVSGLQLLVFLLFQC*SEDLRV
Trigger: GACTCTTAGATCCTCAGACAAACACTGAAATAGCAA...AAATACAAGAAGCTGTAAGCCGGATACTTTACAGTTTTGCCACTGCCTTCCGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR-3UTR CAA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGACACAGAATAAGCCTTaGACTTTGCAATGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQTQNKP*TLQCLF
Trigger: GAAAAGACATTGCAAAGTCAAAGGCTTATTCTGTGT...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp ATTCCCGGCACCGCTCACAGTCATCCACTTTTTGCCGAATTTTCTCAATTTCCAACCTGTGTGGTATTCTaGCCAAGCATTTTAAAATGG +
Preference number: 3 (lower is better)
Translates to: IPGTAHSHPLFAEFSQFPTCVVF*PSILKW
Trigger: CCATTTTAAAATGCTTGGCAAGAATACCACACAGGT...TGGAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGTGAGCGGTGCCGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR-3UTR CAA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCAACCACATAATTAAATaGTGCAGATCAGCAGTCCTA +
Preference number: 3 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELNHIIK*CRSAVL
Trigger: TAGGACTGCTGATCTGCACAATTTAATTATGTGGTT...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR TCA 72 bp ACATTCGGCACTGAAAGGGTAACATCTAGTGAAATCTaGCACTGGCTTCTTAAGATGGACATCATCCTTAAG +
Preference number: 3 (lower is better)
Translates to: TFGTERVTSSEI*HWLLKMDIILK
Trigger: CTTAAGGATGATGTCCATCTTAAGAAGCCAGTGTCAGATTTCACTAGATGTTACCCTTTCAGTGCCGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR CCA 72 bp AGACATTTACAGACACGCAACTCAGTCTTTCTCACTTaGACAACCTGTTGTGCAAAAACACTAGGAATCTTG +
Preference number: 3 (lower is better)
Translates to: RHLQTRNSVFLT*TTCCAKTLGIL
Trigger: CAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 72 bp TATTTCACACCGGAAGACGTGTATTCTGAAGAGCTCTaGATTGTAATGACTTTCAGTGAAAGCAAAACAGTC +
Preference number: 3 (lower is better)
Translates to: YFTPEDVYSEEL*IVMTFSESKTV
Trigger: GACTGTTTTGCTTTCACTGAAAGTCATTACAATGCAGAGCTCTTCAGAATACACGTCTTCCGGTGTGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR CCA 72 bp CACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTaGAATTTAAACACTGTCAACGGGGCATATTGGGAA +
Preference number: 3 (lower is better)
Translates to: HIIKLCRSAVLV*NLNTVNGAYWE
Trigger: TTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR TCA 72 bp TTTAAAGGTGCTAAAATCCATTCCATAGCTTTGAAGTaGGAACTTACAGCCCATCTGAACAGTGAGGTTTGT +
Preference number: 3 (lower is better)
Translates to: FKGAKIHSIALK*ELTAHLNSEVC
Trigger: ACAAACCTCACTGTTCAGATGGGCTGTAAGTTCTCACTTCAAAGCTATGGAATGGATTTTAGCACCTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR GCA 72 bp TCTGAACTTTTGCCCATAGATTCCAAATCTAATAAGTaGATGTCACTATTTCGTACATCTTTTCCTGGACTA +
Preference number: 3 (lower is better)
Translates to: SELLPIDSKSNK*MSLFRTSFPGL
Trigger: TAGTCCAGGAAAAGATGTACGAAATAGTGACATGCACTTATTAGATTTGGAATCTATGGGCAAAAGTTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CCA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGGACAGGCCCGGAGGATaGAGACCTCGCAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGDRPGG*RPRSMC
Trigger: GCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTC...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGGTCCAGAGCGTCGGCTaGGCTAGCAGGCCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGVQSVG*ASRPVS
Trigger: ACTAACAGGCCTGCTAGCTCAGCCGACGCTCTGGAC...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGAGCCCATCTGAACAGTaGGGTTTGTACCCAGGCATA +
Preference number: 4 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLSPSEQ*GLYPGI
Trigger: TATGCCTGGGTACAAACCTCACTGTTCAGATGGGCT...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACAAAGTGGGGTCTGCTTaGCAGAACGGCGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHKVGSA*QNGGRQ
Trigger: CTGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTT...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTGCACCTCATTGAGGGCAGGTGTCGTGTTTTCTaGAGGTGTCGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: AQCSVKPRLLGCLHLIEGRCRVF*RCREAA
Trigger: TGCCGCCTCCCGACACCTTCAGAAAACACGACACCT...GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACTACCCAGGCATACTCTaGGGAGGGCCCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYYPGIL*GGPKGP
Trigger: TGGGCCTTTGGGCCCTCCTCAGAGTATGCCTGGGTA...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACCAGCCGCCTCAACACTaGACGCAGAAAAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHQPPQH*TQKRGQ
Trigger: TTGTCCTCTTTTCTGCGTTCAGTGTTGAGGCGGCTG...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCAACATGCGAAGCTCCTTTTCCCCTaGCTGGTCGTCCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: TPEVACFTSSGPVTYQHAKLLFP*LVVHWR
Trigger: CCTCCAATGGACGACCAGCCAGGGGAAAAGGAGCTT...CGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAAAAAGGGGATGGTTGGTaGGGAGGGGGTTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQKGDGW*GGGCHL
Trigger: CAAGTGGCAACCCCCTCCCCACCAACCATCCCCTTT...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGGTCTCACATTCAAGTTaGGATGCCATTTTGACAACA +
Preference number: 4 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLVSHSS*DAILTT
Trigger: TGTTGTCAAAATGGCATCTCAACTTGAATGTGAGAC...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGTTTTGCATTTTCTTCTaGGCGGTATCTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLFCIFF*AVSLRK
Trigger: CTTCCTAAGAGATACCGCTCAGAAGAAAATGCAAAA...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACCAAGTCTCTTTCCCTTaGACCCCGGTTGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHQVSFP*TPVAVF
Trigger: AAAGACAGCAACCGGGGTTCAAGGGAAAGAGACTTG...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp ACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCAACATGCGCAAGCTCTGGTCCAGTaGCCTACCAACATGCGTCTA +
Preference number: 4 (lower is better)
Translates to: TPEVACFTSSGPVTYQHAQALVQ*PTNMRL
Trigger: TAGACGCATGTTGGTAGGTCACTGGACCAGAGCTTG...CGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACTCGGGAGGCGGCAGCTaGTCTCAGCAAGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYSGGGS*SQQVSF
Trigger: GAAAGAGACTTGCTGAGAGCAGCTGCCGCCTCCCGA...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGCTGGTCACCAGCTCATaGGCTAAGTCATCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGLVTSS*AKSSFS
Trigger: GGAAAACGATGACTTAGCCCATGAGCTGGTGACCAG...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGTAGTGCAATCTTGCTaGTCACCAGCTCATGGGCTA +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHVVQSC*SPAHGL
Trigger: TAGCCCATGAGCTGGTGACCAGCAAGATTGCACTAC...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGTTCTCCATGTCTACCTaGGGGACCTTCTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GDLAACAPCADIYRHATQFSMST*GTFCWH
Trigger: ATGCCAGCAGAAGGTCCCCCAGGTAGACATGGAGAA...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGTCAGCAGTCCTAGTCTaGAATTTAAACACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLSAVLV*NLNTVN
Trigger: GTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGA...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCAAGGCCCAGCCCATCTaGGAGGGACAGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELKAQPI*EGQARR
Trigger: CCTCCGGGCCTGTCCCTCCCAGATGGGCTGGGCCTT...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTCAAGTCTCTTTCCCTTaGACCCCGGTTGCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVQVSFP*TPVAVF
Trigger: AAAGACAGCAACCGGGGTTCAAGGGAAAGAGACTTG...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGGGTATCACTGAACTTTaGGATCCAGACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDLAACAPCADIYRHATQGITEL*DPDCGR
Trigger: CCTGCCACAGTCTGGATCGCAAAGTTCAGTGATACC...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACAACGGCGGAAGGCAGTaGCAAAACTGTAAAGTATCC +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHNGGRQ*QNCKVS
Trigger: GGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTT...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGCTGCTTCACAAGCTCTaGTCCAGTGACCTACCAACA +
Preference number: 4 (lower is better)
Translates to: GDLAACAPCADIYRHATQLLHKL*SSDLPT
Trigger: TGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAG...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ATTCCCGGCACCGCTCACAGTCATCCACTTTTTGCCGAATTTTCTCAATTTCCATCTCCGAGCCCCACCTaGGCTTTCAGCCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: IPGTAHSHPLFAEFSQFPSPSPT*AFSPPQ
Trigger: CTGAGGCGGGCTGAAAGCCCAGGTGGGGCTCGGAGA...TGGAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGTGAGCGGTGCCGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 72 bp CCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTaGCTGGGCCTGCTGTTCCCTCATGGTGTGATATTC +
Preference number: 4 (lower is better)
Translates to: PILPLKSLDGVF*LGLLFPHGVIF
Trigger: GAATATCACACCATGAGGGAACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACTTCACCATCCAGTTGTaGCCTTTTCACAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHFTIQL*PFHKLL
Trigger: AAGGAGCTTGTGAAAAGGTCACAACTGGATGGTGAA...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAAGATGAAGCGGAGAGCTaGTTAGAAAGAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQDEAES*LERGPS
Trigger: AGATGGGCCTCTTTCTAATCAGCTCTCCGCTTCATC...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACATGCGTCTATGGATCTaGCTTAGGTACATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHMRLWI*LRYILV
Trigger: GACCAGAATGTACCTAAGTCAGATCCATAGACGCAT...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGAATTATTTGAATTTCTaGTCCCTTGCCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGNYLNF*SLAPPP
Trigger: TGGGGGTGGGGCAAGGGATCAGAAATTCAAATAATT...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGAGCTCTTTTTGCAGCTaGTGTTCACTTCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGSSFCS*CSLPFP
Trigger: AGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCT...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGGCTGAAAGTGGGGTCTaGTTGGCAGAACGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLAESGV*LAERRK
Trigger: CTTCCGCCGTTCTGCCAAGCAGACCCCACTTTCAGC...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTTCGATGGGGTCTTCTTaGTGGGCCTGCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PCADIYRHATQSFSLGQPSMGSS*WACCSL
Trigger: GAGGGAACAGCAGGCCCAGCAAGAAGACCCCATCGA...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACCCTTGGTTGAGCTTATaGCTTTTACACGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHPWLSL*LLHALL
Trigger: AAGAAGGGCGTGTAAAAGGCATAAGCTCAACCAAGG...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGCCACGTCTTCTTGGCTaGCTGCACCTCATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLPRLLG*LHLIEG
Trigger: GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGG...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACAGACCTCGCAGCATGTaGACCCTGCGCAGACATTTA +
Preference number: 4 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYRPRSM*TLRRHL
Trigger: TAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCT...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTGCACCTCATTGAGGGCGTAGTGCAATCTTGCTaGTCACCAGCTCATGGGCTA +
Preference number: 4 (lower is better)
Translates to: AQCSVKPRLLGCLHLIEGVVQSC*SPAHGL
Trigger: TAGCCCATGAGCTGGTGACCAGCAAGATTGCACTAC...GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGCAATTTCCACCTTATTaGCTGTCTGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGQFPPY*LSAASP
Trigger: TGGAGAAGCAGCAGACAGCCAATAAGGTGGAAATTG...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp TCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTGGTCACCAGCTCATGGGATGAAGCGGAGAGCTaGTTAGAAAGAGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SALSRSFRSAILLVTSSWDEAES*LERGPS
Trigger: AGATGGGCCTCTTTCTAATCAGCTCTCCGCTTCATC...CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGGCTGGGTGAGGTGTTaGCGTACACGGGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGGWVRC*RTRGRG
Trigger: GCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCC...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACATCGATGGGGTCTTCTTaGTGGGCCTGCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTSMGSS*WACCSL
Trigger: GAGGGAACAGCAGGCCCAGCAAGAAGACCCCATCGA...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTCCTTGGTTGAGCTTATaGCTTTTACACGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVPWLSL*LLHALL
Trigger: AAGAAGGGCGTGTAAAAGGCATAAGCTCAACCAAGG...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp CCTTATTCAGAGCATCTGCCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGTCCTTTTCCCCTGGCTaGTCGTCCATTGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: PYSEHLPFPQRYPGPSVVSFSPG*SSIGGS
Trigger: GGATCCTCCAATGGACGACCAGCCAGGGGAAAAGGA...CACTACGGAAGGACCTGGATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp TCAGTGAAAGCAAAACAGTCACTCTCAGGAGTTCCATCATGCCCTCTGACACAGAAAGTGGGGTCTGCTTaGCAGAACGGCGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SVKAKQSLSGVPSCPLTQKVGSA*QNGGRQ
Trigger: CTGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTT...CTGTGTCAGAGGGCATGATGGAACTCCTGAGAGTGACTGTTTTGCTTTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CCA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTTCTGGGGTGCAGCAGTaGCTGAAAGTGGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRSGVQQ*LKVGSA
Trigger: AGCAGACCCCACTTTCAGCCACTGCTGCACCCCAGA...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACATCTGGGGTGCAGCAGTaGCTGAAAGTGGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTSGVQQ*LKVGSA
Trigger: AGCAGACCCCACTTTCAGCCACTGCTGCACCCCAGA...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGCTGCCTGCACCTCATTaGGGGCAAGCCCTAAATGGT +
Preference number: 4 (lower is better)
Translates to: TSLRASPKWCSKSCILHSLPAPH*GQALNG
Trigger: ACCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAG...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ATTCCCGGCACCGCTCACAGTCATCCACTTTTTGCCGAATTTTCTCAATTTCCAGCTGAAAGTGGGGTCTaGTTGGCAGAACGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: IPGTAHSHPLFAEFSQFPAESGV*LAERRK
Trigger: CTTCCGCCGTTCTGCCAAGCAGACCCCACTTTCAGC...TGGAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGTGAGCGGTGCCGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAAGACCAGAACACTGAATaGCTGTTCTTCAGGCATATG +
Preference number: 4 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQDQNTE*LFFRHM
Trigger: CATATGCCTGAAGAACAGGCATTCAGTGTTCTGGTC...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp ACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCAACATGCGACCTTATTGGCTGTCTaGTGCTTCTCCAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: TPEVACFTSSGPVTYQHATLLAV*CFSNLS
Trigger: TGAAAGATTGGAGAAGCAGCAGACAGCCAATAAGGT...CGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTCCCTTGAACCCCGGTTaGTGTCTTTATGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PCADIYRHATQSFSLGQPPLNPG*CLYGAQ
Trigger: CTGAGCTCCATAAAGACAGCAACCGGGGTTCAAGGG...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGGCCAAACCCAAAACCTaGACCATACAGTTTAACAGA +
Preference number: 4 (lower is better)
Translates to: GDLAACAPCADIYRHATQAKPKT*TIQFNR
Trigger: TCTGTTAAACTGTATGGTGCAGGTTTTGGGTTTGGC...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGGCAGCATGTGCACCCTaGGCAGACATTTACAGACAC +
Preference number: 4 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLAACAP*ADIYRH
Trigger: GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGC...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTTGGTGGGGAGGGGGTTaGCACTTGTTACCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRWWGGG*HLLPPL
Trigger: TAAGGGAGGTAACAAGTGGCAACCCCCTCCCCACCA...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGATGGGGTCTTCTTGCTaGGCCTGCTGTTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQMGSSC*ACCSLM
Trigger: CATGAGGGAACAGCAGGCCCAGCAAGAAGACCCCAT...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGCTCAAATCGCTCGATaGGGTCTTCTTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRAQIAR*GLLAGP
Trigger: AGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGC...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAATCCATTTCTCTCAGCTaGTTCTTGAGCGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQSISLS*FLSVSF
Trigger: GAAAGAGACGCTCAAGAACCAGCTGAGAGAAATGGA...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CAA 72 bp TCCTCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTaGCTGGTCACCAGCTCATGGGCTAAGTCATCGTTT +
Preference number: 4 (lower is better)
Translates to: SSALSRSFRSAI*LVTSSWAKSSF
Trigger: AAACGATGACTTAGCCCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp TCAGTGAAAGCAAAACAGTCACTCTCAGGAGTTCCATCATGCCCTCTGACACAGCATCGGCCACTGGTGTaGAAGGACTTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SVKAKQSLSGVPSCPLTQHRPLV*KDLKLQ
Trigger: CTGAAGCTTCAAGTCCTTTCACACCAGTGGCCGATG...CTGTGTCAGAGGGCATGATGGAACTCCTGAGAGTGACTGTTTTGCTTTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGATAAAAGCAGGTCGATaGTATGGAAGACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: GDLAACAPCADIYRHATQIKAGR*YGRPCR
Trigger: TCTACATGGTCTTCCATATCATCGACCTGCTTTTAT...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACTGTTCCCTCATGGTGTaGTATTCTTTCTCGTATTTT +
Preference number: 4 (lower is better)
Translates to: PEDGDLAACAPCADIYRHCSLMV*YSFSYF
Trigger: AAAATACGAGAAAGAATATCACACCATGAGGGAACA...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCCTGCCTGCACCTCATTaGGGGCAAGCCCTAAATGGT +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELLPAPH*GQALNG
Trigger: ACCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAG...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTAGGTGTCGTGTTTTCTaGAGGTGTCGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGRCRVF*RCREAA
Trigger: TGCCGCCTCCCGACACCTTCAGAAAACACGACACCT...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGCCCACCCCAGCCTTTTaGAGTCATTTGGCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLPTPAF*SHLAAN
Trigger: ATTAGCTGCCAAATGACTTCAAAAGGCTGGGGTGGG...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp TCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTGGTCACCAGCTCATGGTTCTTCAGGCATCTCTaGTCTTCAGCACAGTACAGA +
Preference number: 4 (lower is better)
Translates to: SALSRSFRSAILLVTSSWFFRHL*SSAQYR
Trigger: TCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGAA...CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTTCAGGAATGTATTCCTaGATGAGGCGCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: PCADIYRHATQSFSLGQPSGMYS*MRRSNW
Trigger: CCAGTTGGAGCGCCTCATGCAGGAATACATTCCTGA...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTTCCGTAGTGCAATCTTaGTGGTCACCAGCTCATGGG +
Preference number: 4 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRSVVQS*WSPAHG
Trigger: CCCATGAGCTGGTGACCAGCAAGATTGCACTACGGA...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CTTCAAGGCTTATATCCAGGAAGTGGTTGTACAGGTCAGGAATGTATTCCTGCACCACGTCTTCTTGGCTaGCTGCACCTCATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LQGLYPGSGCTGQECIPAPRLLG*LHLIEG
Trigger: GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGG...TGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTACTGGCTTCTTAAGATaGACATCATCCTTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVTGFLR*TSSLRL
Trigger: AAGCCTTAAGGATGATGTCCATCTTAAGAAGCCAGT...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp ACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCAACATGCGTCGTACATCTTTTCCTaGACTAAGGAGAAGACCAAA +
Preference number: 4 (lower is better)
Translates to: TPEVACFTSSGPVTYQHASYIFS*TKEKTK
Trigger: TTTGGTCTTCTCCTTAGTCCAGGAAAAGATGTACGA...CGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTTTTCTGCACATTCTTTaGATACATCACCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVFLHIL*IHHQIH
Trigger: GTGGATCTGGTGATGTATCCAAAGAATGTGCAGAAA...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTTATATCCAGGAAGTaGTTGTACAGGTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQLISRK*LYRSGM
Trigger: CATTCCTGACCTGTACAACCACTTCCTGGATATAAG...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCATGGGGTCTTCTTGCTaGGCCTGCTGTTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELMGSSC*ACCSLM
Trigger: CATGAGGGAACAGCAGGCCCAGCAAGAAGACCCCAT...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp TCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGGCCCTGGTCACCAGCTCATaGGCTAAGTCATCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLRASPKWCSKSCILHSALVTSS*AKSSFS
Trigger: GGAAAACGATGACTTAGCCCATGAGCTGGTGACCAG...GGCCGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp GCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTGCACCTCATTGAGGGCCTGACATCACCTGTGTaGTATTCTTGCCAAGCATTT +
Preference number: 4 (lower is better)
Translates to: AQCSVKPRLLGCLHLIEGLTSPV*YSCQAF
Trigger: AAATGCTTGGCAAGAATACCACACAGGTGATGTCAG...GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 72 bp TTTATGGAGCTCAGTGTTCGGTTAAACCACGTCTTCTaGGCTGCCTGCACCTCATTGAGGGCAAGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: FMELSVRLNHVF*AACTSLRASPK
Trigger: TTTAGGGCTTGCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGCTCCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCCATCGGCCACTGGTGTaGAAGGACTTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELHRPLV*KDLKLQ
Trigger: CTGAAGCTTCAAGTCCTTTCACACCAGTGGCCGATG...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTGCACCTCATTGAGGGCGTCTCACATTCAAGTTaGGATGCCATTTTGACAACA +
Preference number: 4 (lower is better)
Translates to: AQCSVKPRLLGCLHLIEGVSHSS*DAILTT
Trigger: TGTTGTCAAAATGGCATCTCAACTTGAATGTGAGAC...GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTGTAGATAGGGTAGTTTaGTATTTCAGTGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVVDRVV*YFSVCL
Trigger: CAGACAAACACTGAAATAGCAAACTACCCTATCTAC...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGGGTATCACTGAACTTTaGGATCCAGACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSLRASPKWCSKSCILHSGITEL*DPDCGR
Trigger: CCTGCCACAGTCTGGATCGCAAAGTTCAGTGATACC...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACATCAGGAATGTATTCCTaGATGAGGCGCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTSGMYS*MRRSNW
Trigger: CCAGTTGGAGCGCCTCATGCAGGAATACATTCCTGA...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ACCAGAACACTGAATGCCTGTTCTTCAGGCATCTCTGATCTTCAGCACAGTACATCCGTAGTGCAATCTTaGTGGTCACCAGCTCATGGG +
Preference number: 4 (lower is better)
Translates to: TRTLNACSSGISDLQHSTSVVQS*WSPAHG
Trigger: CCCATGAGCTGGTGACCAGCAAGATTGCACTACGGA...TGTACTGTGCTGAAGATCAGAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCTTATTCAGAGCATCTaGCTTTTCCTCAGCGTTATC +
Preference number: 4 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYLIQSI*LFLSVI
Trigger: GATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAG...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTCCAGGTGGCTTCAGATaGAACTATGAAACCCTCCTA +
Preference number: 4 (lower is better)
Translates to: PCADIYRHATQSFSLGQPPGGFR*NYETLL
Trigger: TAGGAGGGTTTCATAGTTGCATCTGAAGCCACCTGG...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGGGCATATTGGGAAAGTCCTTTTCCCCTGGCTaGTCGTCCATTGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: ISSPSLEFKHCQRGILGKSFSPG*SSIGGS
Trigger: GGATCCTCCAATGGACGACCAGCCAGGGGAAAAGGA...CTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CTTAAGATGGACATCATCCTTAAGGCTTCCACTTCACTCCTGGGAGCATTTACCCTTCCACTTCACTCCTaGGAGCATTTACCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LKMDIILKASTSLLGAFTLPLHS*EHLPRH
Trigger: GTGCCTCGGTAAATGCTCCCAGGAGTGAAGTGGAAG...GGTAAATGCTCCCAGGAGTGAAGTGGAAGCCTTAAGGATGATGTCCATCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTGATAGCACTGTCCTaGGGAGACTCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: PCADIYRHATQSFSLGQPVIALS*GDSFVI
Trigger: TATCACAAAGGAGTCTCCCCAGGACAGTGCTATCAC...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTTGTTCTTCAGGCATATaGAGAAGGAGCACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PCADIYRHATQSFSLGQPCSSGI*RRSTAA
Trigger: TGCTGCTGTGCTCCTTCTCCATATGCCTGAAGAACA...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGCACGGGGAAGAGGCCTaGGAGGTCACACTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWHGEEA*EVTLRS
Trigger: ACTCCTCAGTGTGACCTCCCAGGCCTCTTCCCCGTG...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CAA 72 bp TCCTTGGTTGAGCTTATGCCTTTTACACGCCCTTCTTaGTTGAAAAATTCCCGGCACCGCTCACAGTCATCC +
Preference number: 4 (lower is better)
Translates to: SLVELMPFTRPS*LKNSRHRSQSS
Trigger: GGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGCTCAACCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACACATCTAGTGAAATCTaGCACTGGCTTCTTAAGATG +
Preference number: 4 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYTSSEI*HWLLKM
Trigger: CATCTTAAGAAGCCAGTGTCAGATTTCACTAGATGT...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp TCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTGGTCACCAGCTCATGGATACGACTTTCCATCTaGACTTTTGCCCATAGATTC +
Preference number: 4 (lower is better)
Translates to: SALSRSFRSAILLVTSSWIRLSI*TFAHRF
Trigger: GAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTAT...CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CCTTATTCAGAGCATCTGCCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGGTTGAGATGCCATTTTaGCAACAGTTCTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: PYSEHLPFPQRYPGPSVVVEMPF*QQFSPC
Trigger: ACATGGGGAGAACTGTTGTCAAAATGGCATCTCAAC...CACTACGGAAGGACCTGGATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTCACGCCCTTCTTTGTTaGAAAATTCCCGGCACCGCT +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGHALLC*KIPGTA
Trigger: AGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTG...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTAACTTACAGCCCATCTaGACAGTGAGGTTTGTACCC +
Preference number: 4 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRNLQPI*TVRFVP
Trigger: GGGTACAAACCTCACTGTTCAGATGGGCTGTAAGTT...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAAGTAGATAGGGTAGTTTaGTATTTCAGTGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQVDRVV*YFSVCL
Trigger: CAGACAAACACTGAAATAGCAAACTACCCTATCTAC...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CTTCAAGGCTTATATCCAGGAAGTGGTTGTACAGGTCAGGAATGTATTCCTGCACCCTTGAACCCCGGTTaGTGTCTTTATGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LQGLYPGSGCTGQECIPAPLNPG*CLYGAQ
Trigger: CTGAGCTCCATAAAGACAGCAACCGGGGTTCAAGGG...TGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCATCGGGAGGCGGCAGCTaGTCTCAGCAAGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPSGGGS*SQQVSF
Trigger: GAAAGAGACTTGCTGAGAGCAGCTGCCGCCTCCCGA...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTGCAAAAACACTAGGATCTTACCCCAGAGGTTaGCTGCTTCACAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRNSVFLTWTTCCAKTLGSYPRG*LLHKLW
Trigger: CCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGA...TCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCGAGGACAAAACCATCTaGGTGTCAGCCTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELEDKTI*VSACQH
Trigger: ATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTC...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGGACCAGAACACTGAATaGCTGTTCTTCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQDQNTE*LFFRHL
Trigger: GAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGTC...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp ACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTGCAAAAACACTAGGACTTCCACTTCACTCCTaGGAGCATTTACCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TRNSVFLTWTTCCAKTLGLPLHS*EHLPRH
Trigger: GTGCCTCGGTAAATGCTCCCAGGAGTGAAGTGGAAG...TCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCAAAGTGGGGTCTGCTTaGCAGAACGGCGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIIKVGSA*QNGGRQ
Trigger: CTGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTT...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp GGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAACTCAGTTCTTATCAATTCCTTaGCGTAGTTTAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: GDLAACAPCADIYRHATQFLSIP*RSLKHC
Trigger: ACAGTGCTTTAAACTACGCCAAGGAATTGATAAGAA...CTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGAGGGCAAGCCCTAAATaGTGTTCCAAGTCCTGTATC +
Preference number: 4 (lower is better)
Translates to: TSLRASPKWCSKSCILHSRASPK*CSKSCI
Trigger: GATACAGGACTTGGAACACCATTTAGGGCTTGCCCT...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTGGTACATTCTGGTCCTaGGACAAGTCACAGAATCAC +
Preference number: 4 (lower is better)
Translates to: ERRKEDKTICVSACQHITGTFWS*DKSQNH
Trigger: GTGATTCTGTGACTTGTCCCAGGACCAGAATGTACC...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp TCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGGCCAGTCTGAAGAGACACTaGTTTTTCCAACAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SLRASPKWCSKSCILHSASLKRH*FFQQKP
Trigger: AGGCTTCTGTTGGAAAAATCAGTGTCTCTTCAGACT...GGCCGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp ACCAGAACACTGAATGCCTGTTCTTCAGGCATCTCTGATCTTCAGCACAGTACAAGGGTTAATGGTGGATaGAGCGGAGAGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: TRTLNACSSGISDLQHSTRVNGG*SGELIR
Trigger: TCTAATCAGCTCTCCGCTTCATCCACCATTAACCCT...TGTACTGTGCTGAAGATCAGAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTTTCCATCATGCCCTCTaGCACAGAAGAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRFHHAL*HRRGFC
Trigger: ACAAAATCCTCTTCTGTGTCAGAGGGCATGATGGAA...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGTTCCATCATGCCCTCTaGCACAGAAGAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: TSLRASPKWCSKSCILHSFHHAL*HRRGFC
Trigger: ACAAAATCCTCTTCTGTGTCAGAGGGCATGATGGAA...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCAGGAGAAGGTATCACTaGACTTTGCGATCCAGACTG +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELRRRYH*TLRSRL
Trigger: CAGTCTGGATCGCAAAGTTCAGTGATACCTTCTCCT...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTCACATTTCTTTTAACTaGGCAGACTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PCADIYRHATQSFSLGQPHISFN*ADSSSS
Trigger: GCTGGAAGAAGAGTCTGCTCAGTTAAAAGAAATGTG...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCTTATTCAGAGCATCTGCCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGCACATTTCTTTTAACTaGGCAGACTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PYSEHLPFPQRYPGPSVVHISFN*ADSSSS
Trigger: GCTGGAAGAAGAGTCTGCTCAGTTAAAAGAAATGTG...CACTACGGAAGGACCTGGATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGGTCACACTGAGGAGTaGTTTCTAGAGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGGHTEE*FLECPE
Trigger: CTCTGGACACTCTAGAAATCACTCCTCAGTGTGACC...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCAGAAAAGAATTATTTaGATTTCTGATCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYQKRII*ISDPLP
Trigger: GGGCAAGGGATCAGAAATTCAAATAATTCTTTTCTG...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGAGCTCTTTTTGCAGCTaGTGTTCACTTCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQSSFCS*CSLPFP
Trigger: AGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCT...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGGGAGGCATACATGTGTaGTTCAAGGCTTATATCCAG +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQGGIHV*FKAYIQ
Trigger: CTGGATATAAGCCTTGAAGCACACATGTATGCCTCC...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp TCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGGCCCTTATTCAGAGCATCTaGCTTTTCCTCAGCGTTATC +
Preference number: 4 (lower is better)
Translates to: SLRASPKWCSKSCILHSALIQSI*LFLSVI
Trigger: GATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAG...GGCCGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTTTTAATCTCAGATTCTaGCTTGTCGAGTTCCCGACG +
Preference number: 4 (lower is better)
Translates to: ERRKEDKTICVSACQHITFNLRF*LVEFPT
Trigger: CGTCGGGAACTCGACAAGGCAGAATCTGAGATTAAA...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGACCCCAGAGGTTGCCTaGTTCACAAGCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWTPEVA*FTSSGP
Trigger: TGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGT...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTGCAAAAACACTAGGATGGCTGGTCGTCCATTaGAGGATCCATCAGTACATC +
Preference number: 4 (lower is better)
Translates to: TRNSVFLTWTTCCAKTLGWLVVH*RIHQYI
Trigger: GATGTACTGATGGATCCTCCAATGGACGACCAGCCA...TCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GGCGGAAGGCAGTGGCAAAACTGTAAAGTATCCGGCTTACAGCTTCTTGTATTTAACGGCGGAAGGCAGTaGCAAAACTGTAAAGTATCC +
Preference number: 4 (lower is better)
Translates to: GGRQWQNCKVSGLQLLVFNGGRQ*QNCKVS
Trigger: GGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTT...AAATACAAGAAGCTGTAAGCCGGATACTTTACAGTTTTGCCACTGCCTTCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CCA 90 bp AGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCTGCTCTGGGGTGCAGCAGTaGCTGAAAGTGGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RRRPKHLSMASSLLVVCCSGVQQ*LKVGSA
Trigger: AGCAGACCCCACTTTCAGCCACTGCTGCACCCCAGA...GCAGCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CCA 90 bp ATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCAAGAGTAAGAAACCACTaGGAGGCATACATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: MPFTRPSLLKNSRHRSQSRVRNH*EAYMCA
Trigger: AGCACACATGTATGCCTCCCAGTGGTTTCTTACTCT...TGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACACCTGCTGTTCCCTCATaGTGTGATATTCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTPAVPS*CDILSR
Trigger: ACGAGAAAGAATATCACACCATGAGGGAACAGCAGG...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp TCAGCGTTATCCAGGTCCTTCCGTAGTGCAATCTTGCTGGTCACCAGCTCATGGCATCTAAAACCTCCTTaGTTGAGCTTATGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: SALSRSFRSAILLVTSSWHLKPP*LSLCLL
Trigger: TAAAAGGCATAAGCTCAACCAAGGAGGTTTTAGATG...CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAAGGACCTGGATAACGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 72 bp TTGGTTGAGCTTATGCCTTTTACACGCCCTTCTTTGTaGAAAAATTCCCGGCACCGCTCACAGTCATCCACT +
Preference number: 4 (lower is better)
Translates to: LVELMPFTRPSL*KNSRHRSQSST
Trigger: AGTGGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGCTCAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp TGGCTTCTTAAGATGGACATCATCCTTAAGGCTTCCACTTCACTCCTGGGAGCAAGTCTGAAGAGACACTaGTTTTTCCAACAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: WLLKMDIILKASTSLLGASLKRH*FFQQKP
Trigger: AGGCTTCTGTTGGAAAAATCAGTGTCTCTTCAGACT...TGCTCCCAGGAGTGAAGTGGAAGCCTTAAGGATGATGTCCATCTTAAGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTAGGGTTAATGGTGGATaGAGCGGAGAGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGRVNGG*SGELIR
Trigger: TCTAATCAGCTCTCCGCTTCATCCACCATTAACCCT...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGGAAGACGTGTATTCTaGAGAGCTCTGCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTGRRVF*RALHCN
Trigger: ATTACAATGCAGAGCTCTTCAGAATACACGTCTTCC...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGCTGTGGCAGGCGAACTaGAGGACTGGCTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWLWQAN*RTGCSF
Trigger: AAAACTACAGCCAGTCCTTCAGTTCGCCTGCCACAG...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCACTGTGGCAGGCGAACTaGAGGACTGGCTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPLWQAN*RTGCSF
Trigger: AAAACTACAGCCAGTCCTTCAGTTCGCCTGCCACAG...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCGTTGAGATGCCATTTTaGCAACAGTTCTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELVEMPF*QQFSPC
Trigger: ACATGGGGAGAACTGTTGTCAAAATGGCATCTCAAC...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGAATGTATTCCTGCATaGGGCGCTCCAACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGECIPA*GAPTGK
Trigger: TTTACCAGTTGGAGCGCCTCATGCAGGAATACATTC...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp TCTTCAGGCATCTCTGATCTTCAGCACAGTACAGATCATAACAGGTACTCAAAACACGCCCTTCTTTGTTaGAAAATTCCCGGCACCGCT +
Preference number: 4 (lower is better)
Translates to: SSGISDLQHSTDHNRYSKHALLC*KIPGTA
Trigger: AGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTG...TTTTGAGTACCTGTTATGATCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGCTAGGAATCTTGAAGTaGGGGAGCTCTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWLGILK*GSSVHS
Trigger: GCTGTGGACAGAGCTCCCTCACTTCAAGATTCCTAG...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CCTTATTCAGAGCATCTGCCTTTTCCTCAGCGTTATCCAGGTCCTTCCGTAGTGCATTTTCCAGGTATTTaGTTCTCTCTTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PYSEHLPFPQRYPGPSVVHFPGI*FSLQPC
Trigger: ACATGGCTGAAGAGAGAATCAAATACCTGGAAAATG...CACTACGGAAGGACCTGGATAACGCTGAGGAAAAGGCAGATGCTCTGAATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCGGAGGCATACATGTGTaGTTCAAGGCTTATATCCAG +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELGGIHV*FKAYIQ
Trigger: CTGGATATAAGCCTTGAAGCACACATGTATGCCTCC...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTTTATTGGCTGTCTGCTaGTTCTCCAATCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRLLAVC*FSNLSL
Trigger: GAGTGAAAGATTGGAGAAGCAGCAGACAGCCAATAA...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp TCTTCAGGCATCTCTGATCTTCAGCACAGTACAGATCATAACAGGTACTCAAAACTTCCACTTCACTCCTaGGAGCATTTACCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGISDLQHSTDHNRYSKLPLHS*EHLPRH
Trigger: GTGCCTCGGTAAATGCTCCCAGGAGTGAAGTGGAAG...TTTTGAGTACCTGTTATGATCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp CTTCAAGGCTTATATCCAGGAAGTGGTTGTACAGGTCAGGAATGTATTCCTGCAGTGATAGCACTGTCCTaGGGAGACTCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: LQGLYPGSGCTGQECIPAVIALS*GDSFVI
Trigger: TATCACAAAGGAGTCTCCCCAGGACAGTGCTATCAC...TGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGCTTATATCCAGGAAGTaGTTGTACAGGTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQLISRK*LYRSGM
Trigger: CATTCCTGACCTGTACAACCACTTCCTGGATATAAG...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp TACTCAAAACTCTTTGCTGACATCACCTGTGTGGTATTCTTGCCAAGCATTTTAGCTCAAATCGCTCGATaGGGTCTTCTTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: YSKLFADITCVVFLPSILAQIAR*GLLAGP
Trigger: AGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGC...TAAAATGCTTGGCAAGAATACCACACAGGTGATGTCAGCAAAGAGTTTTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp ACCAGAACACTGAATGCCTGTTCTTCAGGCATCTCTGATCTTCAGCACAGTACATCCATTTCTCTCAGCTaGTTCTTGAGCGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TRTLNACSSGISDLQHSTSISLS*FLSVSF
Trigger: GAAAGAGACGCTCAAGAACCAGCTGAGAGAAATGGA...TGTACTGTGCTGAAGATCAGAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTAGGGCAAGCCCTAAATaGTGTTCCAAGTCCTGTATC +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGRASPK*CSKSCI
Trigger: GATACAGGACTTGGAACACCATTTAGGGCTTGCCCT...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGGACTTAGGTACATTCTaGTCCTGGGACAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVDLGTF*SWDKSQ
Trigger: CTGTGACTTGTCCCAGGACCAGAATGTACCTAAGTC...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CAA 72 bp GACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTaGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: DTQLSLSHLDNL*CKNTRNLEVRE
Trigger: CTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp TACTCAAAACTCTTTGCTGACATCACCTGTGTGGTATTCTTGCCAAGCATTTTACATCGGCCACTGGTGTaGAAGGACTTGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YSKLFADITCVVFLPSILHRPLV*KDLKLQ
Trigger: CTGAAGCTTCAAGTCCTTTCACACCAGTGGCCGATG...TAAAATGCTTGGCAAGAATACCACACAGGTGATGTCAGCAAAGAGTTTTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTTTTGCATTTTCTTCTaGGCGGTATCTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQFCIFF*AVSLRK
Trigger: CTTCCTAAGAGATACCGCTCAGAAGAAAATGCAAAA...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGACCTTCTGCTGGCATTaGAGCAGAAAAGAATTATTT +
Preference number: 4 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLTFCWH*SRKELF
Trigger: AAATAATTCTTTTCTGCTTCAATGCCAGCAGAAGGT...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGGAGCCCAATGAACCTTaGGTGAAATTAAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVEPNEP*VKLSAR
Trigger: TCGAGCACTTAATTTCACTCAAGGTTCATTGGGCTC...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp ATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGGGCATATTGGGAAAGGAGAGCAGAGCCCAATaGACCTTGAGTGAAATTAAG +
Preference number: 4 (lower is better)
Translates to: ISSPSLEFKHCQRGILGKESRAQ*TLSEIK
Trigger: CTTAATTTCACTCAAGGTTCATTGGGCTCTGCTCTC...CTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGTCCATAGCTTTGAAGTaGGAACTTACAGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVSIALK*ELTAHL
Trigger: CAGATGGGCTGTAAGTTCTCACTTCAAAGCTATGGA...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGAATTTCACTGGCTCTTaGGTCCTGTTTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQNFTGS*VLFSHH
Trigger: ATGATGAGAAAACAGGACTCAAGAGCCAGTGAAATT...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ACTAAGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGGCTGAAAGTGGGGTCTaGTTGGCAGAACGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TKEKTKTPFNGKFFISCLAESGV*LAERRK
Trigger: CTTCCGCCGTTCTGCCAAGCAGACCCCACTTTCAGC...CAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR GCA 90 bp ACCAGAACACTGAATGCCTGTTCTTCAGGCATCTCTGATCTTCAGCACAGTACAACTAAGGATGACAACTaGTTCGGTCTCACATTCAAG +
Preference number: 4 (lower is better)
Translates to: TRTLNACSSGISDLQHSTTKDDN*FGLTFK
Trigger: CTTGAATGTGAGACCGAAGCAGTTGTCATCCTTAGT...TGTACTGTGCTGAAGATCAGAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ATTCCCGGCACCGCTCACAGTCATCCACTTTTTGCCGAATTTTCTCAATTTCCATTATTGGCTGTCTGCTaGTTCTCCAATCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: IPGTAHSHPLFAEFSQFPLLAVC*FSNLSL
Trigger: GAGTGAAAGATTGGAGAAGCAGCAGACAGCCAATAA...TGGAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGTGAGCGGTGCCGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGGGCATATTGGGAAAGGAATTTCTGATCCCTTaGCCCACCCCCACTATATAT +
Preference number: 4 (lower is better)
Translates to: ISSPSLEFKHCQRGILGKEFLIP*PTPTIY
Trigger: ATATATAGTGGGGGTGGGGCAAGGGATCAGAAATTC...CTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCATGGCTGGTCGTCCATTaGAGGATCCATCAGTACATC +
Preference number: 4 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPWLVVH*RIHQYI
Trigger: GATGTACTGATGGATCCTCCAATGGACGACCAGCCA...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp ACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTGCAAAAACACTAGGACTCATCTCTGGTTTTTaGAGCCCTACTAATGGCACA +
Preference number: 4 (lower is better)
Translates to: TRNSVFLTWTTCCAKTLGLISGF*SPTNGT
Trigger: TGTGCCATTAGTAGGGCTCCAAAAACCAGAGATGAG...TCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTTTTCTGCACATTCTTTaGATACATCACCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: ERRKEDKTICVSACQHITFLHIL*IHHQIH
Trigger: GTGGATCTGGTGATGTATCCAAAGAATGTGCAGAAA...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTAAAGTAGTCATGGGCTaGGAATGTTCGGTTAATATC +
Preference number: 4 (lower is better)
Translates to: ERRKEDKTICVSACQHITKVVMG*ECSVNI
Trigger: GATATTAACCGAACATTCCCAGCCCATGACTACTTT...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGAAAGTAGTCATGGGCTaGGAATGTTCGGTTAATATC +
Preference number: 4 (lower is better)
Translates to: TSLRASPKWCSKSCILHSKVVMG*ECSVNI
Trigger: GATATTAACCGAACATTCCCAGCCCATGACTACTTT...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGCCTGCTGTTCCCTCATaGTGTGATATTCTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVPAVPS*CDILSR
Trigger: ACGAGAAAGAATATCACACCATGAGGGAACAGCAGG...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
3UTR CAA 72 bp CGTCTTTTCTCTTCTTCTGCATCAATCAACTTCTGTTaGGTCATCAGCAGCTCCTTATTCAGAGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: RLFSSSASINFC*VISSSLFRASA
Trigger: GGCAGATGCTCTGAATAAGGAGCTGCTGATGACCAAACAGAAGTTGATTGATGCAGAAGAAGAGAAAAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 72 bp TCTTTCTCTTCATCCGTGTCCTCATCTAAAACCTCCTaGGTTGAGCTTATGCCTTTTACACGCCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SFSSSVSSSKTS*VELMPFTRPSL
Trigger: CAAAGAAGGGCGTGTAAAAGGCATAAGCTCAACCAAGGAGGTTTTAGATGAGGACACGGATGAAGAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp ATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGGGCATATTGGGAAAGAGTCTGAAGAGACACTaGTTTTTCCAACAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ISSPSLEFKHCQRGILGKSLKRH*FFQQKP
Trigger: AGGCTTCTGTTGGAAAAATCAGTGTCTCTTCAGACT...CTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGGAAGACGTGTATTCTaGAGAGCTCTGCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGGRRVF*RALHCN
Trigger: ATTACAATGCAGAGCTCTTCAGAATACACGTCTTCC...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCAGGAGAAGGTATCACTaGACTTTGCGATCCAGACTG +
Preference number: 4 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIIRRRYH*TLRSRL
Trigger: CAGTCTGGATCGCAAAGTTCAGTGATACCTTCTCCT...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTGCAAAAACACTAGGAACTAAGGATGACAACTaGTTCGGTCTCACATTCAAG +
Preference number: 4 (lower is better)
Translates to: TRNSVFLTWTTCCAKTLGTKDDN*FGLTFK
Trigger: CTTGAATGTGAGACCGAAGCAGTTGTCATCCTTAGT...TCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGCAGCCATGTGTAATTTaGTGTTTAACATATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQQPCVI*CLTYLL
Trigger: CAGCAGATATGTTAAACAGCAAATTACACATGGCTG...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp TCTTCAGGCATCTCTGATCTTCAGCACAGTACAGATCATAACAGGTACTCAAAAAACGGCGGAAGGCAGTaGCAAAACTGTAAAGTATCC +
Preference number: 4 (lower is better)
Translates to: SSGISDLQHSTDHNRYSKNGGRQ*QNCKVS
Trigger: GGATACTTTACAGTTTTGCCACTGCCTTCCGCCGTT...TTTTGAGTACCTGTTATGATCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp ACCAGAACACTGAATGCCTGTTCTTCAGGCATCTCTGATCTTCAGCACAGTACATCGTACATCTTTTCCTaGACTAAGGAGAAGACCAAA +
Preference number: 4 (lower is better)
Translates to: TRTLNACSSGISDLQHSTSYIFS*TKEKTK
Trigger: TTTGGTCTTCTCCTTAGTCCAGGAAAAGATGTACGA...TGTACTGTGCTGAAGATCAGAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTAGTAAGTCAGTTTACTaGAAACTACGCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGSKSVY*KLRCPH
Trigger: ATGAGGACAGCGTAGTTTTCAGTAAACTGACTTACT...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp CTTCAAGGCTTATATCCAGGAAGTGGTTGTACAGGTCAGGAATGTATTCCTGCAAGTAAGTCAGTTTACTaGAAACTACGCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LQGLYPGSGCTGQECIPASKSVY*KLRCPH
Trigger: ATGAGGACAGCGTAGTTTTCAGTAAACTGACTTACT...TGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCTGTAATGACTTTCAGTaGAAGCAAAACAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELCNDFQ*KQNSHS
Trigger: AGAGTGACTGTTTTGCTTTCACTGAAAGTCATTACA...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp ATTCCCGGCACCGCTCACAGTCATCCACTTTTTGCCGAATTTTCTCAATTTCCATGTAATGACTTTCAGTaGAAGCAAAACAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: IPGTAHSHPLFAEFSQFPCNDFQ*KQNSHS
Trigger: AGAGTGACTGTTTTGCTTTCACTGAAAGTCATTACA...TGGAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGTGAGCGGTGCCGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp ATTCCTTGGCGTAGTTTAAAGCACTGTCTGTCCTTATCTTTGGGAACTGCACTAGGAAGACGTGTATTCTaGAGAGCTCTGCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: IPWRSLKHCLSLSLGTALGRRVF*RALHCN
Trigger: ATTACAATGCAGAGCTCTTCAGAATACACGTCTTCC...TAGTGCAGTTCCCAAAGATAAGGACAGACAGTGCTTTAAACTACGCCAAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR GCA 90 bp CTTAAGATGGACATCATCCTTAAGGCTTCCACTTCACTCCTGGGAGCATTTACCGTAGATAGGGTAGTTTaGTATTTCAGTGTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LKMDIILKASTSLLGAFTVDRVV*YFSVCL
Trigger: CAGACAAACACTGAAATAGCAAACTACCCTATCTAC...GGTAAATGCTCCCAGGAGTGAAGTGGAAGCCTTAAGGATGATGTCCATCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR GCA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTCTTATCTTTGGGAACTaGACTAAAATAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: ERRKEDKTICVSACQHITLIFGN*TKITFT
Trigger: GGTAAAGGTTATTTTAGTGCAGTTCCCAAAGATAAG...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR GCA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCATTTAATCTCAGATTCTaGCTTGTCGAGTTCCCGACG +
Preference number: 4 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPFNLRF*LVEFPT
Trigger: CGTCGGGAACTCGACAAGGCAGAATCTGAGATTAAA...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCTCATCTCTGGTTTTTaGAGCCCTACTAATGGCACA +
Preference number: 4 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIILISGF*SPTNGT
Trigger: TGTGCCATTAGTAGGGCTCCAAAAACCAGAGATGAG...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGACTGGCTTCTTAAGATaGACATCATCCTTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVTGFLR*TSSLRL
Trigger: AAGCCTTAAGGATGATGTCCATCTTAAGAAGCCAGT...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGTTCTTATCAATTCCTTaGCGTAGTTTAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: TSLRASPKWCSKSCILHSFLSIP*RSLKHC
Trigger: ACAGTGCTTTAAACTACGCCAAGGAATTGATAAGAA...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGAGAGTAAGAAACCACTaGGAGGCATACATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWRVRNH*EAYMCA
Trigger: AGCACACATGTATGCCTCCCAGTGGTTTCTTACTCT...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp CACTTGGACAACCTGTTGTGCAAAAACACTAGGAATCTTGAAGTGAGGGAGCTCCATCTAAAACCTCCTTaGTTGAGCTTATGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: HLDNLLCKNTRNLEVRELHLKPP*LSLCLL
Trigger: TAAAAGGCATAAGCTCAACCAAGGAGGTTTTAGATG...GAGCTCCCTCACTTCAAGATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGACAGAATCACACATCTaGCCAAAGAAGGCAACAAAA +
Preference number: 4 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVTESHI*PKKATK
Trigger: TTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGT...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCTGCTTCCATCATGCCCTCTaGCACAGAAGAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: RRRPKHLSMASSLLVVCCFHHAL*HRRGFC
Trigger: ACAAAATCCTCTTCTGTGTCAGAGGGCATGATGGAA...GCAGCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGATAAAGTTGACACACTaGAACTACCTTAGCACAATG +
Preference number: 4 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVIKLTH*NYLSTM
Trigger: CATTGTGCTAAGGTAGTTTCAGTGTGTCAACTTTAT...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCACTCAAAACTCTTTGCTaGCATCACCTGTGTGGTATT +
Preference number: 4 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPLKTLC*HHLCGI
Trigger: AATACCACACAGGTGATGTCAGCAAAGAGTTTTGAG...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ATTCCCGGCACCGCTCACAGTCATCCACTTTTTGCCGAATTTTCTCAATTTCCACTTATCTTTGGGAACTaGACTAAAATAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: IPGTAHSHPLFAEFSQFPLIFGN*TKITFT
Trigger: GGTAAAGGTTATTTTAGTGCAGTTCCCAAAGATAAG...TGGAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGTGAGCGGTGCCGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp TCTTCAGGCATCTCTGATCTTCAGCACAGTACAGATCATAACAGGTACTCAAAAACCTTATTGGCTGTCTaGTGCTTCTCCAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSGISDLQHSTDHNRYSKTLLAV*CFSNLS
Trigger: TGAAAGATTGGAGAAGCAGCAGACAGCCAATAAGGT...TTTTGAGTACCTGTTATGATCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGAGTGACCTACCAACATaGGTCTATGGATCTGACTTA +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWSDLPT*VYGSDL
Trigger: TAAGTCAGATCCATAGACGCATGTTGGTAGGTCACT...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp ATTCCTTGGCGTAGTTTAAAGCACTGTCTGTCCTTATCTTTGGGAACTGCACTATCGTACATCTTTTCCTaGACTAAGGAGAAGACCAAA +
Preference number: 4 (lower is better)
Translates to: IPWRSLKHCLSLSLGTALSYIFS*TKEKTK
Trigger: TTTGGTCTTCTCCTTAGTCCAGGAAAAGATGTACGA...TAGTGCAGTTCCCAAAGATAAGGACAGACAGTGCTTTAAACTACGCCAAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CCA 90 bp ACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTGCAAAAACACTAGGATACAACTTGAAAATGTaGGGATTTTGGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRNSVFLTWTTCCAKTLGYNLKM*GFWIPA
Trigger: AGCTGGAATCCAAAATCCCCACATTTTCAAGTTGTA...TCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CCA 90 bp TACTCAAAACTCTTTGCTGACATCACCTGTGTGGTATTCTTGCCAAGCATTTTACAATTTCCACCTTATTaGCTGTCTGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YSKLFADITCVVFLPSILQFPPY*LSAASP
Trigger: TGGAGAAGCAGCAGACAGCCAATAAGGTGGAAATTG...TAAAATGCTTGGCAAGAATACCACACAGGTGATGTCAGCAAAGAGTTTTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGCATTCCCTACAATCTTaGGTCCTGTTTTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWHSLQS*VLFSHH
Trigger: ATGATGAGAAAACAGGACTCAAGATTGTAGGGAATG...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AAGTGCTCGAATAACCACATAATTAAATTGTGCAGATCAGCAGTCCTAGTCTGGATACGACTTTCCATCTaGACTTTTGCCCATAGATTC +
Preference number: 4 (lower is better)
Translates to: KCSNNHIIKLCRSAVLVWIRLSI*TFAHRF
Trigger: GAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTAT...CCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR TCA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCATAAAAGCAGGTCGATaGTATGGAAGACCATGTAGA +
Preference number: 4 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIIIKAGR*YGRPCR
Trigger: TCTACATGGTCTTCCATATCATCGACCTGCTTTTAT...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCTGCACTGGTGTGAAAGGACTTaGAGCTTCAGAATCTTGAGT +
Preference number: 4 (lower is better)
Translates to: EKTKTPFNGKFFISCLLHWCERT*SFRILS
Trigger: ACTCAAGATTCTGAAGCTTCAAGTCCTTTCACACCA...GTGCAGCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp GAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCTGCACAGTAAGTCAGTTTACTaGAAACTACGCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EKTKTPFNGKFFISCLLHSKSVY*KLRCPH
Trigger: ATGAGGACAGCGTAGTTTTCAGTAAACTGACTTACT...GTGCAGCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp TACTCAAAACTCTTTGCTGACATCACCTGTGTGGTATTCTTGCCAAGCATTTTAACATCTAGTGAAATCTaGCACTGGCTTCTTAAGATG +
Preference number: 4 (lower is better)
Translates to: YSKLFADITCVVFLPSILTSSEI*HWLLKM
Trigger: CATCTTAAGAAGCCAGTGTCAGATTTCACTAGATGT...TAAAATGCTTGGCAAGAATACCACACAGGTGATGTCAGCAAAGAGTTTTGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp CTCCCCGTAATAACATACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAATGTAATGACTTTCAGTaGAAGCAAAACAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LPVITYDFPSELLPIDSKCNDFQ*KQNSHS
Trigger: AGAGTGACTGTTTTGCTTTCACTGAAAGTCATTACA...TTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTATGTTATTACGGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCTGTTCCCTCATGGTGTaGTATTCTTTCTCGTATTTT +
Preference number: 4 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIICSLMV*YSFSYF
Trigger: AAAATACGAGAAAGAATATCACACCATGAGGGAACA...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR TCA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCACACAGAATAAGCCTTTaGCTTTGCAATGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPHRISL*LCNVFS
Trigger: AGAAAAGACATTGCAAAGTCAAAGGCTTATTCTGTG...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR GCA 90 bp ATTCCTTGGCGTAGTTTAAAGCACTGTCTGTCCTTATCTTTGGGAACTGCACTACTTATCTTTGGGAACTaGACTAAAATAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: IPWRSLKHCLSLSLGTALLIFGN*TKITFT
Trigger: GGTAAAGGTTATTTTAGTGCAGTTCCCAAAGATAAG...TAGTGCAGTTCCCAAAGATAAGGACAGACAGTGCTTTAAACTACGCCAAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CCA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCTACAACTTGAAAATGTaGGGATTTTGGATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIIYNLKM*GFWIPA
Trigger: AGCTGGAATCCAAAATCCCCACATTTTCAAGTTGTA...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
3UTR CAA 72 bp CTCCCCGTAATAACATACGACTTTCCATCTGAACTTTaGCCCATAGATTCCAAATCTAATAAGTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: LPVITYDFPSEL*PIDSKSNKCMS
Trigger: TGACATGCACTTATTAGATTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTATGTTATTACGGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp CTAAGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCACATCTAGTGAAATCTaGCACTGGCTTCTTAAGATG +
Preference number: 4 (lower is better)
Translates to: LRRRPKHLSMASSLLVVCTSSEI*HWLLKM
Trigger: CATCTTAAGAAGCCAGTGTCAGATTTCACTAGATGT...GCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR TCA 90 bp TACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAATCTAATAAGTGCATGATACGACTTTCCATCTaGACTTTTGCCCATAGATTC +
Preference number: 4 (lower is better)
Translates to: YDFPSELLPIDSKSNKCMIRLSI*TFAHRF
Trigger: GAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTAT...CATGCACTTATTAGATTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
3UTR CAA 72 bp AGTGAAATTAAGTGCTCGAATAACCACATAATTAAATaGTGCAGATCAGCAGTCCTAGTCTGGAATTTAAAC +
Preference number: 4 (lower is better)
Translates to: SEIKCSNNHIIK*CRSAVLVWNLN
Trigger: GTTTAAATTCCAGACTAGGACTGCTGATCTGCACAATTTAATTATGTGGTTATTCGAGCACTTAATTTCACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTGAAAGTGGGGTCTGCTaGGCAGAACGGCGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVESGVC*AERRKA
Trigger: TGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTTC...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGTTTACACGCCCTTCTTaGTTGAAAAATTCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLFTRPS*LKNSRH
Trigger: GTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAA...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GCCTATTCTCCCGCTCAAATCGCTCGATGGGGTCTTCTTGCTGGGCCTGCTGTTGCTGCCTGCACCTCATaGAGGGCAAGCCCTAAATGG +
Preference number: 5 (lower is better)
Translates to: AYSPAQIARWGLLAGPAVAACTS*RASPKW
Trigger: CCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAGC...AACAGCAGGCCCAGCAAGAAGACCCCATCGAGCGATTTGAGCGGGAGAATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCTCGATGGGGTCTTCTaGCTGGGCCTGCTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYLDGVF*LGLLFP
Trigger: AGGGAACAGCAGGCCCAGCAAGAAGACCCCATCGAG...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGTTCCGTAGTGCAATCTaGCTGGTCACCAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGFRSAI*LVTSSW
Trigger: CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAA...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp CCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACACACGCCCTTCTTTGTaGAAAAATTCCCGGCACCGC +
Preference number: 5 (lower is better)
Translates to: PEDGDLAACAPCADIYRHTRPSL*KNSRHR
Trigger: GCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGT...GTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACATCTCAGATTCTGCCTaGTCGAGTTCCCGACGGCAC +
Preference number: 5 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYISDSA*SSSRRH
Trigger: GTGCCGTCGGGAACTCGACAAGGCAGAATCTGAGAT...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp CCATCTGGGAGGGACAGGCCCGGAGGATGGAGACCTCGCAGCATGTGCACCCTGACAGTCATCCACTTTTaGCCGAATTTTCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: PSGRDRPGGWRPRSMCTLTVIHF*PNFLNF
Trigger: GAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGT...CAGGGTGCACATGCTGCGAGGTCTCCATCCTCCGGGCCTGTCCCTCCCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp ACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCAACATGCGTTAAACCACGTCTTCTaGGCTGCCTGCACCTCATTG +
Preference number: 5 (lower is better)
Translates to: TPEVACFTSSGPVTYQHALNHVF*AACTSL
Trigger: CAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAA...CGCATGTTGGTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAAGCAAGTCTCTTTCCCTaGAACCCCGGTTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQASLFP*NPGCCL
Trigger: AAGACAGCAACCGGGGTTCAAGGGAAAGAGACTTGC...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGTCTTCGAAGTTTTGCTaGAAAAGTTCCCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGSSKFC*KSSLSP
Trigger: TGGGCTCAGGGAACTTTTCAAGCAAAACTTCGAAGA...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GCTCAGTGTTCGGTTAAACCACGTCTTCTTGGCTGCCTGCACCTCATTGAGGGCTTAAACCACGTCTTCTaGGCTGCCTGCACCTCATTG +
Preference number: 5 (lower is better)
Translates to: AQCSVKPRLLGCLHLIEGLNHVF*AACTSL
Trigger: CAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAA...GCCCTCAATGAGGTGCAGGCAGCCAAGAAGACGTGGTTTAACCGAACACTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS TCA 90 bp ATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTaGAGGTGTCGGGAGGCGGCAGCTGCTCTCAGCAAGTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: ITHLAKEGNKRCRVF*RCREAAAALSKSLS
Trigger: GGAAAGAGACTTGCTGAGAGCAGCTGCCGCCTCCCGACACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AACTCAGCCTTTAGGCTGGGTGAGGTGTTGACGTACACGGGGAAGAGGCCTGGGTCAGTAGTACTACGTTaGCTGAAGGGCCAGAATAAT +
Preference number: 5 (lower is better)
Translates to: NSAFRLGEVLTYTGKRPGSVVLR*LKGQNN
Trigger: ATTATTCTGGCCCTTCAGCAAACGTAGTACTACTGA...CCCAGGCCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCTAAAGGCTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGCTGGCTGGTCGTCCATaGGAGGATCCATCAGTACAT +
Preference number: 5 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLLAGRP*EDPSVH
Trigger: ATGTACTGATGGATCCTCCAATGGACGACCAGCCAG...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGAAAGTGGGGTCTGCTaGGCAGAACGGCGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGESGVC*AERRKA
Trigger: TGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTTC...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTCTTACCCCAGAGGTaGCCTGCTTCACAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRVLPQR*PASQAL
Trigger: CAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGAC...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp ATCAGCAGTCCTAGTCTGGAATTTAAACACTGTCAACGGGGCATATTGGGAAAGAGGCTGGGTGAGGTGTaGACGTACACGGGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: ISSPSLEFKHCQRGILGKRLGEV*TYTGKR
Trigger: CCTCTTCCCCGTGTACGTCAACACCTCACCCAGCCT...CTTTCCCAATATGCCCCGTTGACAGTGTTTAAATTCCAGACTAGGACTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS GCA 90 bp AAGCCACAATACATCCTTAGCAGAAAGCCTTGCAAAGCAGGAATGTaGTTCAACCCGCGTACTGCAGAACTAAGACACGGAGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: KPQYILSRKPCKAGM*FNPRTAELRHGGRR
Trigger: TCTCCTCCCTCCGTGTCTTAGTTCTGCAGTACGCGGGTTGAAGCACATTCCTGCTTTGCAAGGCTTTCTGCTAAGGATGTATTGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493854.5
CDS CCA 90 bp AATCTTGAGTCCTGTTTTCTCATCATCACTTCCATTATTTGTAGATaGTGTCTCATCTCCTTGCCCGACCTGCCGTCTCCTCCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: NLESCFLIITSIICR*CLISLPDLPSPPPP
Trigger: CGGCGGAGGAGGAGACGGCAGGTCGGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGATGATGAGAAAACAGGACTCAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459903.5
CDS-3UTR CAA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGCCGGCTTACAGCTTCTaGTATTTCACACCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLPAYSF*YFTPED
Trigger: GTCTTCCGGTGTGAAATACAAGAAGCTGTAAGCCGG...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACATTCCGTAGTGCAATCTaGCTGGTCACCAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTFRSAI*LVTSSW
Trigger: CCATGAGCTGGTGACCAGCAAGATTGCACTACGGAA...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGCTGCCTGCACCTCATaGAGGGCAAGCCCTAAATGG +
Preference number: 5 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGAACTS*RASPKW
Trigger: CCATTTAGGGCTTGCCCTCAATGAGGTGCAGGCAGC...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTGGAGGGGGTTGCCACTaGTTACCTCCCTTATTACAG +
Preference number: 5 (lower is better)
Translates to: ERRKEDKTICVSACQHITGGGCH*LPPLLQ
Trigger: CTGTAATAAGGGAGGTAACAAGTGGCAACCCCCTCC...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGTTGGTGGGGAGGGGGTaGCCACTTGTTACCTCCCTT +
Preference number: 5 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVLVGRG*PLVTSL
Trigger: AAGGGAGGTAACAAGTGGCAACCCCCTCCCCACCAA...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS GCA 90 bp TCTTCCTCTTCATCATCTTCTGGAGGAGAAGGTATCACTGAACTTTaGGATCCAGACTGTGGCAGGCGAACTGAAGGACTGGCTGTAGTT +
Preference number: 5 (lower is better)
Translates to: SSSSSSSGGEGITEL*DPDCGRRTEGLAVV
Trigger: AACTACAGCCAGTCCTTCAGTTCGCCTGCCACAGTCTGGATCGCAAAGTTCAGTGATACCTTCTCCTCCAGAAGATGATGAAGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373647.9
ENST00000456584.5
CDS CCA 90 bp GAAAGTAGTGGGTGCTTCAGTGCCTGCACTGAAGACCAAGACTTCTaGTGGCCTGGGCAATCTCAGTCATTATGGATGTGGTATTTCCTA +
Preference number: 5 (lower is better)
Translates to: ESSGCFSACTEDQDF*WPGQSQSLWMWYFL
Trigger: TAGGAAATACCACATCCATAATGACTGAGATTGCCCAGGCCACCAGAAGTCTTGGTCTTCAGTGCAGGCACTGAAGCACCCACTACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480054.1
CDS-3UTR CAA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACACCGGCTTACAGCTTCTaGTATTTCACACCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTPAYSF*YFTPED
Trigger: GTCTTCCGGTGTGAAATACAAGAAGCTGTAAGCCGG...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTAGCAAACGCGGACTTTaGTCTCCAGGAGAAATCGAA +
Preference number: 5 (lower is better)
Translates to: PCADIYRHATQSFSLGQPSKRGL*SPGEIE
Trigger: TTCGATTTCTCCTGGAGACAAAAGTCCGCGTTTGCT...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACCTAAAACCTCCTTGGTaGAGCTTATGCCTTTTACAC +
Preference number: 5 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYLKPPW*SLCLLH
Trigger: GTGTAAAAGGCATAAGCTCAACCAAGGAGGTTTTAG...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS CCA 90 bp AGTAGTGGGTGCTTCAGTGCCTGCACTGAAGACCAAGACTTCTGGTaGCCTGGGCAATCTCAGTCATTATGGATGTGGTATTTCCTATTT +
Preference number: 5 (lower is better)
Translates to: SSGCFSACTEDQDFW*PGQSQSLWMWYFLF
Trigger: AAATAGGAAATACCACATCCATAATGACTGAGATTGCCCAGGCCACCAGAAGTCTTGGTCTTCAGTGCAGGCACTGAAGCACCCACTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480054.1
CDS-3UTR CAA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACTTTCCAACAGAAGCCTaGTCATCCATAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYFPTEA*SSITQE
Trigger: TTCTTGAGTTATGGATGACAAGGCTTCTGTTGGAAA...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACTTGCTATTTCAGTGTTaGTCTGAGGATCTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYLLFQC*SEDLRV
Trigger: GACTCTTAGATCCTCAGACAAACACTGAAATAGCAA...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp TACTCAAAACTCTTTGCTGACATCACCTGTGTGGTATTCTTGCCAAGCATTTTACTCGATGGGGTCTTCTaGCTGGGCCTGCTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: YSKLFADITCVVFLPSILLDGVF*LGLLFP
Trigger: AGGGAACAGCAGGCCCAGCAAGAAGACCCCATCGAG...TAAAATGCTTGGCAAGAATACCACACAGGTGATGTCAGCAAAGAGTTTTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCAATTTCCACCTTATaGGCTGTCTGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQSISTL*AVCCFS
Trigger: GGAGAAGCAGCAGACAGCCAATAAGGTGGAAATTGA...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp TCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGGCCTTTACACGCCCTTCTTaGTTGAAAAATTCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: SLRASPKWCSKSCILHSAFTRPS*LKNSRH
Trigger: GTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAA...GGCCGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CTTCAAGGCTTATATCCAGGAAGTGGTTGTACAGGTCAGGAATGTATTCCTGCAGCAAGTCTCTTTCCCTaGAACCCCGGTTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LQGLYPGSGCTGQECIPAASLFP*NPGCCL
Trigger: AAGACAGCAACCGGGGTTCAAGGGAAAGAGACTTGC...TGCAGGAATACATTCCTGACCTGTACAACCACTTCCTGGATATAAGCCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp AGGATGGAGACCTCGCAGCATGTGCACCCTGCGCAGACATTTACAGACACGCAAAGGCTTACAGCTATTTaGGTAACTGAACAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: RMETSQHVHPAQTFTDTQRLTAI*VTEQER
Trigger: TCTTTCTTGTTCAGTTACCAAAATAGCTGTAAGCCT...TTGCGTGTCTGTAAATGTCTGCGCAGGGTGCACATGCTGCGAGGTCTCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS GCA 90 bp TGGTCGTCCATTGGAGGATCCATCAGTACATCTGCTAGCTCTTTTTaGAGCTGCTGTTCACTTCCATTCCCTACAATCTTGAGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: WSSIGGSISTSASSF*SCCSLPFPTILSPV
Trigger: AACAGGACTCAAGATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTACTGATGGATCCTCCAATGGACGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317419.7
ENST00000373647.9
ENST00000402311.5
ENST00000459903.5
CDS-3UTR CAA 90 bp CTAAGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCGAAAGTGGGGTCTGCTaGGCAGAACGGCGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LRRRPKHLSMASSLLVVCESGVC*AERRKA
Trigger: TGCCTTCCGCCGTTCTGCCAAGCAGACCCCACTTTC...GCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CAA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTGGTCTCACATTCAAGTaGAGATGCCATTTTGACAAC +
Preference number: 5 (lower is better)
Translates to: PCADIYRHATQSFSLGQPGLTFK*RCHFDN
Trigger: GTTGTCAAAATGGCATCTCAACTTGAATGTGAGACC...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp CCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCATCCATATCCAGGAAGTGGTaGTACAGGTCAGGAATGTAT +
Preference number: 5 (lower is better)
Translates to: PFTRPSLLKNSRHRSQSSISRKW*YRSGMY
Trigger: ATACATTCCTGACCTGTACAACCACTTCCTGGATAT...GGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CCCTGCGCAGACATTTACAGACACGCAACTCAGTCTTTCTCACTTGGACAACCTTCAATCAACTTCTGTTaGGTCATCAGCAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: PCADIYRHATQSFSLGQPSINFC*VISSSL
Trigger: TAAGGAGCTGCTGATGACCAAACAGAAGTTGATTGA...AGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGTCTGTAAATGTCTGCGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCAATCTCAGATTCTGCCTaGTCGAGTTCCCGACGGCAC +
Preference number: 5 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPISDSA*SSSRRH
Trigger: GTGCCGTCGGGAACTCGACAAGGCAGAATCTGAGAT...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp AGTAGTCTTACCCCAGAGGTTGCCTGCTTCACAAGCTCTGGTCCAGTGACCTACAACCACATAATTAAATaGTGCAGATCAGCAGTCCTA +
Preference number: 5 (lower is better)
Translates to: SSLTPEVACFTSSGPVTYNHIIK*CRSAVL
Trigger: TAGGACTGCTGATCTGCACAATTTAATTATGTGGTT...GTAGGTCACTGGACCAGAGCTTGTGAAGCAGGCAACCTCTGGGGTAAGACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS GCA 90 bp CCTCGAAGAGCTTCAGGGACACCGTTTCTTACTAAGGATGACAACTaGTTCGGTCTCACATTCAAGTTGAGATGCCATTTTGACAACAGT +
Preference number: 5 (lower is better)
Translates to: PRRASGTPFLTKDDN*FGLTFKLRCHFDNS
Trigger: ACTGTTGTCAAAATGGCATCTCAACTTGAATGTGAGACCGAAGCAGTTGTCATCCTTAGTAAGAAACGGTGTCCCTGAAGCTCTTCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373647.9
ENST00000456584.5
CDS GCA 90 bp CTGCAATCCAAACAAAAGCCACAATACATCCTTAGCAGAAAGCCTTaGAAAGCAGGAATGTGCTTCAACCCGCGTACTGCAGAACTAAGA +
Preference number: 5 (lower is better)
Translates to: LQSKQKPQYILSRKP*KAGMCFNPRTAELR
Trigger: TCTTAGTTCTGCAGTACGCGGGTTGAAGCACATTCCTGCTTTGCAAGGCTTTCTGCTAAGGATGTATTGTGGCTTTTGTTTGGATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493854.5
CDS-3UTR CAA 90 bp CCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCATCCTTGCTATTTCAGTGTTaGTCTGAGGATCTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: PFTRPSLLKNSRHRSQSSLLFQC*SEDLRV
Trigger: GACTCTTAGATCCTCAGACAAACACTGAAATAGCAA...GGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp GGATCCCCTAACTCTGATCATGTAAACTCAGCCTTTAGGCTGGGTGAGGTGTTGTTTTCTGCACATTCTTaGGATACATCACCAGATCCA +
Preference number: 5 (lower is better)
Translates to: GSPNSDHVNSAFRLGEVLFSAHS*DTSPDP
Trigger: TGGATCTGGTGATGTATCCAAAGAATGTGCAGAAAA...CAACACCTCACCCAGCCTAAAGGCTGAGTTTACATGATCAGAGTTAGGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp ACCAGAACACTGAATGCCTGTTCTTCAGGCATCTCTGATCTTCAGCACAGTACATCTTCGAAGTTTTGCTaGAAAAGTTCCCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: TRTLNACSSGISDLQHSTSSKFC*KSSLSP
Trigger: TGGGCTCAGGGAACTTTTCAAGCAAAACTTCGAAGA...TGTACTGTGCTGAAGATCAGAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp ACACGCAACTCAGTCTTTCTCACTTGGACAACCTGTTGTGCAAAAACACTAGGATCAATTTCCACCTTATaGGCTGTCTGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TRNSVFLTWTTCCAKTLGSISTL*AVCCFS
Trigger: GGAGAAGCAGCAGACAGCCAATAAGGTGGAAATTGA...TCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAGTTGCGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCACACGCCCTTCTTTGTaGAAAAATTCCCGGCACCGC +
Preference number: 5 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIITRPSL*KNSRHR
Trigger: GCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGT...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCATCCTCATCTAAAACCTCCTaGGTTGAGCTTATGCCTTTT +
Preference number: 5 (lower is better)
Translates to: PFTRPSLLKNSRHRSQSSSSKTS*VELMPF
Trigger: AAAAGGCATAAGCTCAACCAAGGAGGTTTTAGATGA...GGATGACTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp GGGACAAGTCACAGAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTCACTTGGACAACCTGTaGTGCAAAAACACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GTSHRITHLAKEGNKRCRHLDNL*CKNTRN
Trigger: ATTCCTAGTGTTTTTGCACAACAGGTTGTCCAAGTG...ACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTCTGTGACTTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS GCA 90 bp TCCATTGGAGGATCCATCAGTACATCTGCTAGCTCTTTTTGCAGCTaGTGTTCACTTCCATTCCCTACAATCTTGAGTCCTGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SIGGSISTSASSFCS*CSLPFPTILSPVFS
Trigger: TGAGAAAACAGGACTCAAGATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTACTGATGGATCCTCCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317419.7
ENST00000373647.9
ENST00000402311.5
ENST00000459903.5
CDS GCA 90 bp TGGTCGTCCATTGGAGGATCCATCAGTACATCTGCTAGCTCTTTTTaGAGCTGCTGTTCACTTCCATTCCCTACAATTGTGTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: WSSIGGSISTSASSF*SCCSLPFPTIVFFE
Trigger: TTCAAAGAACACAATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTACTGATGGATCCTCCAATGGACGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp ACCTCATTGAGGGCAAGCCCTAAATGGTGTTCCAAGTCCTGTATCTTACACTCGTTTCCAACAGAAGCCTaGTCATCCATAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: TSLRASPKWCSKSCILHSFPTEA*SSITQE
Trigger: TTCTTGAGTTATGGATGACAAGGCTTCTGTTGGAAA...CGAGTGTAAGATACAGGACTTGGAACACCATTTAGGGCTTGCCCTCAATGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp ACCAGAACACTGAATGCCTGTTCTTCAGGCATCTCTGATCTTCAGCACAGTACATCAGTAGTACTACGTTaGCTGAAGGGCCAGAATAAT +
Preference number: 5 (lower is better)
Translates to: TRTLNACSSGISDLQHSTSVVLR*LKGQNN
Trigger: ATTATTCTGGCCCTTCAGCAAACGTAGTACTACTGA...TGTACTGTGCTGAAGATCAGAGATGCCTGAAGAACAGGCATTCAGTGTTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp GAACGCAGAAAAGAGGACAAAACCATCTGCGTGTCAGCCTGTCAGCATATCACTTCATCTAAAACCTCCTaGGTTGAGCTTATGCCTTTT +
Preference number: 5 (lower is better)
Translates to: ERRKEDKTICVSACQHITSSKTS*VELMPF
Trigger: AAAAGGCATAAGCTCAACCAAGGAGGTTTTAGATGA...AGTGATATGCTGACAGGCTGACACGCAGATGGTTTTGTCCTCTTTTCTGCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTCTCAGTCTTTCTCACTaGGACAACCTGTTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGLSLSH*DNLLCK
Trigger: TTTGCACAACAGGTTGTCCAAGTGAGAAAGACTGAG...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp GCTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACATTCCATTCCCTACAATaGTGTTCTTTGAAGCCAATG +
Preference number: 5 (lower is better)
Translates to: AYAFYTPFFVEKFPAPLTFHSLQ*CSLKPM
Trigger: CATTGGCTTCAAAGAACACAATTGTAGGGAATGGAA...TGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGACCTGTGTGGTATTCTaGCCAAGCATTTTAAAATGG +
Preference number: 5 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQTCVVF*PSILKW
Trigger: CCATTTTAAAATGCTTGGCAAGAATACCACACAGGT...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS TCA 90 bp CTAGTGAGGGCACTGGTGAAGTTTCATTTGCAGAGAGTTTTCTCTTaGGGACTTACAGCTTCTTGTATTTCACACCGGAAGACGTGTATT +
Preference number: 5 (lower is better)
Translates to: LVRALVKFHLQRVFS*GLTASCISHRKTCI
Trigger: AATACACGTCTTCCGGTGTGAAATACAAGAAGCTGTAAGTCCTCAAGAGAAAACTCTCTGCAAATGAAACTTCACCAGTGCCCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317419.7
CDS GCA 90 bp TCCATTGGAGGATCCATCAGTACATCTGCTAGCTCTTTTTGCAGCTaGTGTTCACTTCCATTCCCTACAATTGTGTTCTTTGAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: SIGGSISTSASSFCS*CSLPFPTIVFFEAN
Trigger: ATTGGCTTCAAAGAACACAATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTACTGATGGATCCTCCAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp GAATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTCCATTCCCTACAATCTaGAGTCCTGTTTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: ESHIWPKKATKGVVFSEGPFPTI*SPVFSS
Trigger: TGATGAGAAAACAGGACTCAAGATTGTAGGGAATGG...ACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp AGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCTGCCCGGCTTACAGCTTCTaGTATTTCACACCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: RRRPKHLSMASSLLVVCCPAYSF*YFTPED
Trigger: GTCTTCCGGTGTGAAATACAAGAAGCTGTAAGCCGG...GCAGCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CAA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCAGCAAACGCGGACTTTaGTCTCCAGGAGAAATCGAA +
Preference number: 5 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIISKRGL*SPGEIE
Trigger: TTCGATTTCTCCTGGAGACAAAAGTCCGCGTTTGCT...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp AATCACACATCTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTGAAGGTGATATCCAGGAAGTGGTaGTACAGGTCAGGAATGTAT +
Preference number: 5 (lower is better)
Translates to: NHTSGQRRQQKVSCFLKVISRKW*YRSGMY
Trigger: ATACATTCCTGACCTGTACAACCACTTCCTGGATAT...CACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAGATGTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS-3UTR CAA 90 bp CTTATGCCTTTTACACGCCCTTCTTTGTTGAAAAATTCCCGGCACCGCTCACAGTCAGCCATGTGTAATTaGCTGTTTAACATATCTGCT +
Preference number: 5 (lower is better)
Translates to: LMPFTRPSLLKNSRHRSQSAMCN*LFNISA
Trigger: AGCAGATATGTTAAACAGCAAATTACACATGGCTGA...CTGTGAGCGGTGCCGGGAATTTTTCAACAAAGAAGGGCGTGTAAAAGGCATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS CCA 90 bp GCTCTTGAGTCCTGTTTTCTCATCATCACTTCCATTATTTGTAGATaGTGTCTCATCTCCTTGCCTGGAAACCAAGACAAAATCTTCACT +
Preference number: 5 (lower is better)
Translates to: ALESCFLIITSIICR*CLISLPGNQDKIFT
Trigger: AGTGAAGATTTTGTCTTGGTTTCCAGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGATGATGAGAAAACAGGACTCAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCGGTCTCACATTCAAGTaGAGATGCCATTTTGACAAC +
Preference number: 5 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIIGLTFK*RCHFDN
Trigger: GTTGTCAAAATGGCATCTCAACTTGAATGTGAGACC...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp TCTTCAGGCATCTCTGATCTTCAGCACAGTACAGATCATAACAGGTACTCAAAATCAATCAACTTCTGTTaGGTCATCAGCAGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SSGISDLQHSTDHNRYSKSINFC*VISSSL
Trigger: TAAGGAGCTGCTGATGACCAAACAGAAGTTGATTGA...TTTTGAGTACCTGTTATGATCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp GCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCCACCATTTTCCAGGTATTaGATTCTCTCTTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: APSKSVNSRSSFEVFNNPPFSRY*ILSSAM
Trigger: CATGGCTGAAGAGAGAATCAAATACCTGGAAAATGG...TGGATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp CTCCCCGTAATAACATACGACTTTCCATCTGAACTTTTGCCCATAGATTCCAAATTGCTATTTCAGTGTTaGTCTGAGGATCTAAGAGTC +
Preference number: 5 (lower is better)
Translates to: LPVITYDFPSELLPIDSKLLFQC*SEDLRV
Trigger: GACTCTTAGATCCTCAGACAAACACTGAAATAGCAA...TTTGGAATCTATGGGCAAAAGTTCAGATGGAAAGTCGTATGTTATTACGGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CAA 90 bp TCTTCAGGCATCTCTGATCTTCAGCACAGTACAGATCATAACAGGTACTCAAAATTTTCTGCACATTCTTaGGATACATCACCAGATCCA +
Preference number: 5 (lower is better)
Translates to: SSGISDLQHSTDHNRYSKFSAHS*DTSPDP
Trigger: TGGATCTGGTGATGTATCCAAAGAATGTGCAGAAAA...TTTTGAGTACCTGTTATGATCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS CCA 90 bp AATCTTGAGTCCTGTTTTCTCATCATCACTTCCATTATTTGTAGATaGTGTCTCATCTCCTTGCCTGGAAACCAAGACAAAATCTTCACT +
Preference number: 5 (lower is better)
Translates to: NLESCFLIITSIICR*CLISLPGNQDKIFT
Trigger: AGTGAAGATTTTGTCTTGGTTTCCAGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGATGATGAGAAAACAGGACTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317419.7
ENST00000373647.9
ENST00000402311.5
ENST00000426918.2
CDS-3UTR CAA 90 bp AGGAGAAGACCAAAACACCTTTCAATGGCAAGTTCTTTATTAGTTGTTTGCTGCTTTCCAACAGAAGCCTaGTCATCCATAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: RRRPKHLSMASSLLVVCCFPTEA*SSITQE
Trigger: TTCTTGAGTTATGGATGACAAGGCTTCTGTTGGAAA...GCAGCAAACAACTAATAAAGAACTTGCCATTGAAAGGTGTTTTGGTCTTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426918.2
CDS-3UTR CAA 90 bp AGGCACCTTCAAAGTCTGTCAACAGCAGGTCATCTTTCGAAGTCTTTAATAATCACAGTCATCCACTTTTaGCCGAATTTTCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: RHLQSLSTAGHLSKSLIITVIHF*PNFLNF
Trigger: GAAATTGAGAAAATTCGGCAAAAAGTGGATGACTGT...GATTATTAAAGACTTCGAAAGATGACCTGCTGTTGACAGACTTTGAAGGTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS-3UTR CAA 90 bp TCTTCAGGCATCTCTGATCTTCAGCACAGTACAGATCATAACAGGTACTCAAAAACACAGAATAAGCCTTaGACTTTGCAATGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SSGISDLQHSTDHNRYSKTQNKP*TLQCLF
Trigger: GAAAAGACATTGCAAAGTCAAAGGCTTATTCTGTGT...TTTTGAGTACCTGTTATGATCTGTACTGTGCTGAAGATCAGAGATGCCTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS GCA 90 bp GATTTAAAAGAATGGTTTGCAAATCTGTCAATGTTAGAACCAGAATaGCTACTTAACCCAATCAAAAGTAGCCAACAGATCTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: DLKEWFANLSMLEPE*LLNPIKSSQQISSD
Trigger: GTCAGAGGAGATCTGTTGGCTACTTTTGATTGGGTTAAGTAGGCATTCTGGTTCTAACATTGACAGATTTGCAAACCATTCTTTTAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317419.7
CDS GCA 90 bp TTCTCATCATCACTTCCATTATTTGTAGATGGTGTCTCATCTCCTTaGCTGGAAACCAAGACAAAATCTTCACTATTAAGAGTAGATACT +
Preference number: 5 (lower is better)
Translates to: FSSSLPLFVDGVSSP*LETKTKSSLLRVDT
Trigger: AGTATCTACTCTTAATAGTGAAGATTTTGTCTTGGTTTCCAGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGATGATGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317419.7
ENST00000373647.9
ENST00000402311.5
ENST00000426918.2
ENST00000456584.5
CDS GCA 72 bp TCACTTCCATTATTTGTAGATGGTGTCTCATCTCCTTaGCCGACCTGCCGTCTCCTCCTCCGCCGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: SLPLFVDGVSSP*PTCRLLLRRPP
Trigger: CGGCGGGCGGCGGAGGAGGAGACGGCAGGTCGGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459903.5
CDS TCA 72 bp CTGGCCAAAGAAGGCAACAAAAGGTGTCGTGTTTTCTaGAGGTGTCGGGAGGCGGCAGCTGCTCTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: LAKEGNKRCRVF*RCREAAAALSK
Trigger: CTTGCTGAGAGCAGCTGCCGCCTCCCGACACCTTCAGAAAACACGACACCTTTTGTTGCCTTCTTTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373647.9
CDS CCA 72 bp AAACTAATGTGTTCAAGACTTGCACACTTCCATATTTaGTCAGTCTGCCGTCTCCTCCTCCGCCGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: KLMCSRLAHFHI*SVCRLLLRRPP
Trigger: CGGCGGGCGGCGGAGGAGGAGACGGCAGACTGACCAAATATGGAAGTGTGCAAGTCTTGAACACATTAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402311.5
CDS CCA 72 bp GGGTGCTTCAGTGCCTGCACTGAAGACCAAGACTTCTaGTGGCCTGGGCAATCTCAGTCATTATGGATGTGG +
Preference number: 6 (lower is better)
Translates to: GCFSACTEDQDF*WPGQSQSLWMW
Trigger: CCACATCCATAATGACTGAGATTGCCCAGGCCACCAGAAGTCTTGGTCTTCAGTGCAGGCACTGAAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480054.1
CDS TCA 72 bp TACGCTGTCCTCATCGGCCACTGGTGTGAAAGGACTTaGAGCTTCAGAATCTCCTTGTCCAGGTTTCACTGG +
Preference number: 6 (lower is better)
Translates to: YAVLIGHWCERT*SFRISLSRFHW
Trigger: CCAGTGAAACCTGGACAAGGAGATTCTGAAGCTTCAAGTCCTTTCACACCAGTGGCCGATGAGGACAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317419.7
ENST00000373647.9
ENST00000456584.5
ENST00000459903.5
CDS GCA 72 bp TCATCATCTTCTGGAGGAGAAGGTATCACTGAACTTTaGGATCCAGACTGTGGCAGGCGAACTGAAGGACTG +
Preference number: 6 (lower is better)
Translates to: SSSSGGEGITEL*DPDCGRRTEGL
Trigger: CAGTCCTTCAGTTCGCCTGCCACAGTCTGGATCGCAAAGTTCAGTGATACCTTCTCCTCCAGAAGATGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373647.9
ENST00000456584.5
CDS CCA 72 bp TGCTTCAGTGCCTGCACTGAAGACCAAGACTTCTGGTaGCCTGGGCAATCTCAGTCATTATGGATGTGGTAT +
Preference number: 6 (lower is better)
Translates to: CFSACTEDQDFW*PGQSQSLWMWY
Trigger: ATACCACATCCATAATGACTGAGATTGCCCAGGCCACCAGAAGTCTTGGTCTTCAGTGCAGGCACTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480054.1
CDS GCA 72 bp TACATCCTTAGCAGAAAGCCTTGCAAAGCAGGAATGTaGTTCAACCCGCGTACTGCAGAACTAAGACACGGA +
Preference number: 6 (lower is better)
Translates to: YILSRKPCKAGM*FNPRTAELRHG
Trigger: TCCGTGTCTTAGTTCTGCAGTACGCGGGTTGAAGCACATTCCTGCTTTGCAAGGCTTTCTGCTAAGGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493854.5
CDS GCA 72 bp GCACTGTCCTGGGGAGACTCCTGTAATTCTGCATGCTaGAATCCAAACAAAAGCCACAATACATCCTTAGCA +
Preference number: 6 (lower is better)
Translates to: ALSWGDSCNSAC*NPNKSHNTSLA
Trigger: TGCTAAGGATGTATTGTGGCTTTTGTTTGGATTGCAGCATGCAGAATTACAGGAGTCTCCCCAGGACAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475607.1
ENST00000493854.5
CDS GCA 72 bp GGATCCATCAGTACATCTGCTAGCTCTTTTTGCAGCTaGTGTTCACTTCCATTCCCTACAATCTTGAGTCCT +
Preference number: 6 (lower is better)
Translates to: GSISTSASSFCS*CSLPFPTILSP
Trigger: AGGACTCAAGATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTACTGATGGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317419.7
ENST00000373647.9
ENST00000402311.5
ENST00000459903.5
CDS GCA 72 bp AAACAAAAGCCACAATACATCCTTAGCAGAAAGCCTTaGAAAGCAGGAATGTGCTTCAACCCGCGTACTGCA +
Preference number: 6 (lower is better)
Translates to: KQKPQYILSRKP*KAGMCFNPRTA
Trigger: TGCAGTACGCGGGTTGAAGCACATTCCTGCTTTGCAAGGCTTTCTGCTAAGGATGTATTGTGGCTTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493854.5
CDS CAA 90 bp CCTAGTGAGGGCACTGGTGAAGTTTCATTTGCAGAGAGTTTTCTCTaGAGGACTTACAGCTTCTTGTATTTCACACCGGAAGACGTGTAT +
Preference number: 6 (lower is better)
Translates to: PSEGTGEVSFAESFL*RTYSFLYFTPEDVY
Trigger: ATACACGTCTTCCGGTGTGAAATACAAGAAGCTGTAAGTCCTCAAGAGAAAACTCTCTGCAAATGAAACTTCACCAGTGCCCTCACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317419.7
CDS GCA 72 bp GCTTCAGGGACACCGTTTCTTACTAAGGATGACAACTaGTTCGGTCTCACATTCAAGTTGAGATGCCATTTT +
Preference number: 6 (lower is better)
Translates to: ASGTPFLTKDDN*FGLTFKLRCHF
Trigger: AAAATGGCATCTCAACTTGAATGTGAGACCGAAGCAGTTGTCATCCTTAGTAAGAAACGGTGTCCCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373647.9
ENST00000456584.5
CDS TCA 72 bp GCACTGGTGAAGTTTCATTTGCAGAGAGTTTTCTCTTaGGGACTTACAGCTTCTTGTATTTCACACCGGAAG +
Preference number: 6 (lower is better)
Translates to: ALVKFHLQRVFS*GLTASCISHRK
Trigger: CTTCCGGTGTGAAATACAAGAAGCTGTAAGTCCTCAAGAGAAAACTCTCTGCAAATGAAACTTCACCAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317419.7
CDS GCA 72 bp GGATCCATCAGTACATCTGCTAGCTCTTTTTGCAGCTaGTGTTCACTTCCATTCCCTACAATTGTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: GSISTSASSFCS*CSLPFPTIVFF
Trigger: AAAGAACACAATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAGAGCTAGCAGATGTACTGATGGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS CAA 72 bp TTTGCAGAGAGTTTTCTCTTGAGGACTTACAGCTTCTaGTATTTCACACCGGAAGACGTGTATTCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: FAESFLLRTYSF*YFTPEDVYSEE
Trigger: CTCTTCAGAATACACGTCTTCCGGTGTGAAATACAAGAAGCTGTAAGTCCTCAAGAGAAAACTCTCTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317419.7
CDS CAA 90 bp GAAGTTTCATTTGCAGAGAGTTTTCTCTTGAGGACTTACAGCTTCTaGTATTTCACACCGGAAGACGTGTATTCTGAAGAGCTCTGCATT +
Preference number: 6 (lower is better)
Translates to: EVSFAESFLLRTYSF*YFTPEDVYSEELCI
Trigger: AATGCAGAGCTCTTCAGAATACACGTCTTCCGGTGTGAAATACAAGAAGCTGTAAGTCCTCAAGAGAAAACTCTCTGCAAATGAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317419.7
CDS GCA 72 bp GAATGGTTTGCAAATCTGTCAATGTTAGAACCAGAATaGCTACTTAACCCAATCAAAAGTAGCCAACAGATC +
Preference number: 6 (lower is better)
Translates to: EWFANLSMLEPE*LLNPIKSSQQI
Trigger: GATCTGTTGGCTACTTTTGATTGGGTTAAGTAGGCATTCTGGTTCTAACATTGACAGATTTGCAAACCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317419.7
CDS CAA 72 bp TTGATTTGGAAAGAGGAGGGAAACTTTCAGGCCACATaGTATAAACTAATGTGTTCAAGACTTGCACACTTC +
Preference number: 6 (lower is better)
Translates to: LIWKEEGNFQAT*YKLMCSRLAHF
Trigger: GAAGTGTGCAAGTCTTGAACACATTAGTTTATACAATGTGGCCTGAAAGTTTCCCTCCTCTTTCCAAATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402311.5
CDS CAA 72 bp GCTGCTGTTCACTTCCATTCCCTACAATTGTGTTCTTaGAAGCCAATGATTTATATCGTTTATCACTTCTGG +
Preference number: 6 (lower is better)
Translates to: AAVHFHSLQLCS*KPMIYIVYHFW
Trigger: CCAGAAGTGATAAACGATATAAATCATTGGCTTCAAAGAACACAATTGTAGGGAATGGAAGTGAACAGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS CAA 90 bp TTTCTCATCATCACTTCCATTATTTGTAGATGGTGTCTCATCTCCTaGCCTGGAAACCAAGACAAAATCTTCACTATTAAGAGTAGATAC +
Preference number: 6 (lower is better)
Translates to: FLIITSIICRWCLIS*PGNQDKIFTIKSRY
Trigger: GTATCTACTCTTAATAGTGAAGATTTTGTCTTGGTTTCCAGGCAAGGAGATGAGACACCATCTACAAATAATGGAAGTGATGATGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317419.7
ENST00000373647.9
ENST00000402311.5
ENST00000426918.2
ENST00000456584.5
CDS CAA 90 bp ATATTATGGTTGATTTGGAAAGAGGAGGGAAACTTTCAGGCCACATaGTATAAACTAATGTGTTCAAGACTTGCACACTTCCATATTTGG +
Preference number: 6 (lower is better)
Translates to: ILWLIWKEEGNFQAT*YKLMCSRLAHFHIW
Trigger: CCAAATATGGAAGTGTGCAAGTCTTGAACACATTAGTTTATACAATGTGGCCTGAAAGTTTCCCTCCTCTTTCCAAATCAACCATAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402311.5
CDS CAA 90 bp GATCCATTTTCCAGGTATTTGATTCTCTCTTCAGCCATGTGTAATTaGCTGTTTAACATATCTGCTGCACTTTTAATTTCACTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: DPFSRYLILSSAMCN*LFNISAALLISLAL
Trigger: AAGAGCCAGTGAAATTAAAAGTGCAGCAGATATGTTAAACAGCAAATTACACATGGCTGAAGAGAGAATCAAATACCTGGAAAATGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456584.5
CDS CAA 90 bp CTTTTTGCAGCTGCTGTTCACTTCCATTCCCTACAATTGTGTTCTTaGAAGCCAATGATTTATATCGTTTATCACTTCTGGAAAATATTC +
Preference number: 6 (lower is better)
Translates to: LFAAAVHFHSLQLCS*KPMIYIVYHFWKIF
Trigger: GAATATTTTCCAGAAGTGATAAACGATATAAATCATTGGCTTCAAAGAACACAATTGTAGGGAATGGAAGTGAACAGCAGCTGCAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456584.5