Pregenerated sensors for RABEPK (Homo sapiens)
Ensembl gene IDs: ENSG00000136933Ensembl transcript IDs: ENST00000259460.12, ENST00000373538.8, ENST00000373544.5, ENST00000394125.8, ENST00000416065.1, ENST00000628863.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCAGCCCCAAGGTGCCCACCAGTCCATACTTGCGTCAAACACATaGAGCTTCGTGTCCTGCACGGGCTGGGCACCTCTCTCTCCGCCC | + |
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Preference number: 1 (lower is better) Translates to: DQPQGAHQSILASNT*SFVSCTGWAPLSPP Trigger: GGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTGGGCACCTTGGGGCTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR GCA 90 bp | GCCCACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTaGACGGGCTGGGCACCTCTCTCTCCGCCCCCAAAGACATATAGC | + |
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Preference number: 1 (lower is better) Translates to: AHQSILASNTCSFVS*TGWAPLSPPPKTYS Trigger: GCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR GCA 90 bp | GACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTaGACGGGCTGGGCACCTCTCTCTCCGCCCCCAAAGACATATAGC | + |
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Preference number: 1 (lower is better) Translates to: DQVRVFASNTCSFVS*TGWAPLSPPPKTYS Trigger: GCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 90 bp | CTCCTGCAGGAGTCATTCCACCAAAGATGTACACATGTTTTCCCATaGCCACAGCTGAGTGGGCAGCACAGCCTGCTGGAGCAGCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LLQESFHQRCTHVFP*PQLSGQHSLLEQPQ Trigger: CTGGGGCTGCTCCAGCAGGCTGTGCTGCCCACTCAGCTGTGGCCATGGGAAAACATGTGTACATCTTTGGTGGAATGACTCCTGCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 90 bp | TGCACGGGCTGGGCACCTCTCTCTCCGCCCCCAAAGACATATAGCTaGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: CTGWAPLSPPPKTYS*FPMAADDVWNVLGD Trigger: ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| 3UTR CCA 90 bp | TCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTaGGCACCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: SILASNTCSFVSCTG*APLSPPPKTYSWFP Trigger: TGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR CCA 90 bp | AGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTaGGCACCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: RVFASNTCSFVSCTG*APLSPPPKTYSWFP Trigger: TGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 90 bp | ATTCCACCAAAGATGTACACATGTTTTCCCATGGCCACAGCTGAGTaGGCAGCACAGCCTGCTGGAGCAGCCCCAGTGGGATTTAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: IPPKMYTCFPMATAE*AAQPAGAAPVGFSF Trigger: GAAGCTAAATCCCACTGGGGCTGCTCCAGCAGGCTGTGCTGCCCACTCAGCTGTGGCCATGGGAAAACATGTGTACATCTTTGGTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 90 bp | TGGCCACAGCTGAGTGGGCAGCACAGCCTGCTGGAGCAGCCCCAGTaGGATTTAGCTTCTGCCATTTCATGTCACTTATATCAATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: WPQLSGQHSLLEQPQ*DLASAISCHLYQCS Trigger: ACTGCATTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTCCAGCAGGCTGTGCTGCCCACTCAGCTGTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR GCA 90 bp | ATGCTGCTCTTCTGTGTGATACTGGTACATTGTGTCCAGTGCTCCTaGAGGAGTCATTCCACCAAAGATGTACACATGTTTTCCCATGGC | + |
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Preference number: 1 (lower is better) Translates to: MLLFCVILVHCVQCS*RSHSTKDVHMFSHG Trigger: GCCATGGGAAAACATGTGTACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATCACACAGAAGAGCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR GCA 90 bp | GGTCCAATGCTGCTCTTCTGTGTGATACTGGTACATTGTGTCCAGTaGTCCTGCAGGAGTCATTCCACCAAAGATGTACACATGTTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: GPMLLFCVILVHCVQ*SCRSHSTKDVHMFS Trigger: GGAAAACATGTGTACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATCACACAGAAGAGCAGCATTGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR TCA 90 bp | AGTTGGAATCTTCTTTCTCAGAAGCACACGTCACTGGCCATGGAATaGTACACATGGAATGGTCCAATCGTCCAGGGGGTAGAAGAGTAT | + |
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Preference number: 1 (lower is better) Translates to: SWNLLSQKHTSLAME*YTWNGPIVQGVEEY Trigger: ATACTCTTCTACCCCCTGGACGATTGGACCATTCCATGTGTATCATTCCATGGCCAGTGACGTGTGCTTCTGAGAAAGAAGATTCCAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 90 bp | TCTGTATTCATCCCACCAAACACCAAACAGAGCAGTGTAGCAGTCTaGCTTTCCTCATGTGAGTCACCACTGTGGCTCATTACTTTGTCA | + |
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Preference number: 1 (lower is better) Translates to: SVFIPPNTKQSSVAV*LSSCESPLWLITLS Trigger: TGACAAAGTAATGAGCCACAGTGGTGACTCACATGAGGAAAGCCAGACTGCTACACTGCTCTGTTTGGTGTTTGGTGGGATGAATACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 90 bp | TTCTCAGAAGCACACGTCACTGGCCATGGAATGATACACATGGAATaGTCCAATCGTCCAGGGGGTAGAAGAGTATCAAATTTAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: FSEAHVTGHGMIHME*SNRPGGRRVSNLSK Trigger: CTTGCTTAAATTTGATACTCTTCTACCCCCTGGACGATTGGACCATTCCATGTGTATCATTCCATGGCCAGTGACGTGTGCTTCTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGATTTCCAAGTGTCTCTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACTGCAGCTTCGTGTCCTaGACGGGCTGGGCACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GGFPSVSGCDQVRVFASNCSFVS*TGWAPL Trigger: GAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCA...GTTTGACGCAAACACTCTGACCTGGTCACAGCCAGAGACACTTGGAAATCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR CCA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTGTGTCCTGCACGGGCTaGGCACCTCTCTCTCCGCCC | + |
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Preference number: 2 (lower is better) Translates to: DTGTLCPVLLQESFHQRCVSCTG*APLSPP Trigger: GGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACAC...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR CCA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTATGGCCACAGCTGAGTaGGCAGCACAGCCTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: DTGTLCPVLLQESFHQRCMATAE*AAQPAG Trigger: TCCAGCAGGCTGTGCTGCCCACTCAGCTGTGGCCAT...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGCAGCCCCAGTGGGATTTAGCTTCTGCCATTTCATGTCACTTATATCAAGCTGCCACCATCACATaGCCATGCCGGGGAGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: LEQPQWDLASAISCHLYQAATIT*PCRGDG Trigger: TCCATCTCCCCGGCATGGTCATGTGATGGTGGCAGC...TTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCCAAAGACATATAGCTaGTTTCCAATGGCTGCCGAT | + |
|
Preference number: 2 (lower is better) Translates to: SPYLRQTHAASCPARAGHPKTYS*FPMAAD Trigger: ATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGG...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACCAAAGACATATAGCTaGTTTCCAATGGCTGCCGAT | + |
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Preference number: 2 (lower is better) Translates to: AVTRSECLRQTHAASCPAPKTYS*FPMAAD Trigger: ATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGG...TGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR CCA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTACCATGCCGGGGAGATaGAGGATTTCCAAGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: DTGTLCPVLLQESFHQRCTMPGR*RISKCL Trigger: GAGACACTTGGAAATCCTCCATCTCCCCGGCATGGT...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGAGAGAGTTGGAATCTTCTTTCTCAGAAGCACACGTCACTGGCCATGGATCCAATGGCTGCCGATaGTGTGTGGAATGTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RVRELESSFSEAHVTGHGSNGCR*CVECSW Trigger: CCAAGAACATTCCACACATCATCGGCAGCCATTGGA...TCCATGGCCAGTGACGTGTGCTTCTGAGAAAGAAGATTCCAACTCTCTCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCCCCAGTGGGATTTAGCTTCTGCCATTTCATGTCACTTATATCAATGCATAGCTGGTTTCCAATaGCTGCCGATGATGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: EQPQWDLASAISCHLYQCIAGFQ*LPMMCG Trigger: TCCACACATCATCGGCAGCCATTGGAAACCAGCTAT...GCATTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATGCCAGGCCTCACTATCCCTTTTTAAATGCCAATTTTGCTGTGGGAAAAATAGCTGGTTTCCAATaGCTGCCGATGATGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: HHARPHYPFLNANFAVGKIAGFQ*LPMMCG Trigger: TCCACACATCATCGGCAGCCATTGGAAACCAGCTAT...TTTTCCCACAGCAAAATTGGCATTTAAAAAGGGATAGTGAGGCCTGGCATGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR-3UTR CCA 90 bp | CTACAGTCACAATACAATCGTCATAGATTTCCCCTTCTGTATTCATCCCACCAAGCTGCCGATGATGTGTaGAATGTTCTTGGGGATGGT | + |
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Preference number: 2 (lower is better) Translates to: LQSQYNRHRFPLLYSSHQAADDV*NVLGDG Trigger: ACCATCCCCAAGAACATTCCACACATCATCGGCAGC...TTGGTGGGATGAATACAGAAGGGGAAATCTATGACGATTGTATTGTGACTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR GCA 72 bp | TCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTaGACGGGCTGGGCACCTCTCTCTCCGCCCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SILASNTCSFVS*TGWAPLSPPPK Trigger: CTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR GCA 72 bp | CAAGGTGCCCACCAGTCCATACTTGCGTCAAACACATaGAGCTTCGTGTCCTGCACGGGCTGGGCACCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QGAHQSILASNT*SFVSCTGWAPL Trigger: GAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTGGGCACCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR GCA 72 bp | AGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTaGACGGGCTGGGCACCTCTCTCTCCGCCCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: RVFASNTCSFVS*TGWAPLSPPPK Trigger: CTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR GCA 72 bp | GGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATaGAGCTTCGTGTCCTGCACGGGCTGGGCACCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GCDQVRVFASNT*SFVSCTGWAPL Trigger: GAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 72 bp | GCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTaGGCACCTCTCTCTCCGCCCCCAAAGACATATAGC | + |
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Preference number: 3 (lower is better) Translates to: ASNTCSFVSCTG*APLSPPPKTYS Trigger: GCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| 3UTR CCA 72 bp | AAGATGTACACATGTTTTCCCATGGCCACAGCTGAGTaGGCAGCACAGCCTGCTGGAGCAGCCCCAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: KMYTCFPMATAE*AAQPAGAAPVG Trigger: TCCCACTGGGGCTGCTCCAGCAGGCTGTGCTGCCCACTCAGCTGTGGCCATGGGAAAACATGTGTACATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 72 bp | TGGGCACCTCTCTCTCCGCCCCCAAAGACATATAGCTaGTTTCCAATGGCTGCCGATGATGTGTGGAATGTT | + |
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Preference number: 3 (lower is better) Translates to: WAPLSPPPKTYS*FPMAADDVWNV Trigger: AACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| 3UTR GCA 72 bp | CAGCCTGCTGGAGCAGCCCCAGTGGGATTTAGCTTCTaGCATTTCATGTCACTTATATCAATGCAGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: QPAGAAPVGFSF*HFMSLISMQWR Trigger: CCTCCACTGCATTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTCCAGCAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 72 bp | TCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATaGCTGCCGATGATGTGTGGAATGTTCTTGGGGATG | + |
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Preference number: 3 (lower is better) Translates to: SLRPQRHIAGFQ*LPMMCGMFLGM Trigger: CATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| 3UTR CCA 72 bp | ATCCCACCAAACACCAAACAGAGCAGTGTAGCAGTCTaGCTTTCCTCATGTGAGTCACCACTGTGGCTCATT | + |
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Preference number: 3 (lower is better) Translates to: IPPNTKQSSVAV*LSSCESPLWLI Trigger: AATGAGCCACAGTGGTGACTCACATGAGGAAAGCCAGACTGCTACACTGCTCTGTTTGGTGTTTGGTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR GCA 72 bp | CTGCTCTTCTGTGTGATACTGGTACATTGTGTCCAGTaGTCCTGCAGGAGTCATTCCACCAAAGATGTACAC | + |
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Preference number: 3 (lower is better) Translates to: LLFCVILVHCVQ*SCRSHSTKDVH Trigger: GTGTACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATCACACAGAAGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR CCA 72 bp | GGAATCTTCTTTCTCAGAAGCACACGTCACTGGCCATaGAATGATACACATGGAATGGTCCAATCGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GIFFLRSTRHWP*NDTHGMVQSSR Trigger: CCTGGACGATTGGACCATTCCATGTGTATCATTCCATGGCCAGTGACGTGTGCTTCTGAGAAAGAAGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| 3UTR-3UTR CAA 90 bp | CACCATGCCAGGCCTCACTATCCCTTTTTAAATGCCAATTTTGCTGTGGGAAAACCCACCAGTCCATACTaGCGTCAAACACATGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: HHARPHYPFLNANFAVGKPTSPY*RQTHAA Trigger: AGCTGCATGTGTTTGACGCAAGTATGGACTGGTGGG...TTTTCCCACAGCAAAATTGGCATTTAAAAAGGGATAGTGAGGCCTGGCATGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGCAGCCCCAGTGGGATTTAGCTTCTGCCATTTCATGTCACTTATATCAAACCAGGTCAGAGTGTTaGCGTCAAACACATGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: LEQPQWDLASAISCHLYQTRSEC*RQTHAA Trigger: AGCTGCATGTGTTTGACGCAAACACTCTGACCTGGT...TTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR GCA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGCCGGGAGGCGGAGGTTaGAGTGAGCCGAGATCGGGC | + |
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Preference number: 4 (lower is better) Translates to: HQSILASNTCSFVSCTGWPGGGG*SEPRSG Trigger: GCCCGATCTCGGCTCACTGCAACCTCCGCCTCCCGG...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| 3UTR CAA 72 bp | GCCCTGACCAGCCCCAAGGTGCCCACCAGTCCATACTaGCGTCAAACACATGCAGCTTCGTGTCCTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: ALTSPKVPTSPY*RQTHAASCPAR Trigger: CCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTGGGCACCTTGGGGCTGGTCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR CCA 90 bp | GTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCTCTCTCAGAGCTCAGTTAGGCTaGCTTCACGTGGGCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: VCVKHMQLRVLHGLGTSLRAQLG*LHVGGT Trigger: GGTCCCGCCCACGTGAAGCCAGCCTAACTGAGCTCT...GAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTCCTGCACGGGCTaGGCACCTCTCTCTCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDVSCTG*APLSPP Trigger: GGGCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACAC...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR TCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACACCCAGGCATGTACCTaGGGCGGGGAAAGGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHTQACT*GGERKG Trigger: GCCTTTCCTTTCCCCGCCTCAGGTACATGCCTGGGT...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGCCGAGATCGGGCAACTaGACTCCAGCCTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: HQSILASNTCSFVSCTGWPRSGN*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAGTTGCCCGATCTCGG...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR CCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACGGTGATCCTCCCACCTaGGCGTCACAAAGTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHGDPPT*ASQSAG Trigger: CCCAGCACTTTGTGACGCCCAGGTGGGAGGATCACC...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | CTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTCCCACGTGGCAGTTCTaGGGCGACTTAGGCCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: LAVTRSECLRQTHAASCPPTWQF*GDLGQS Trigger: CGACTGGCCTAAGTCGCCGCAGAACTGCCACGTGGG...AGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGGGGCTGGTCACTTCTaGCGTGGTCCACGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDGAGHF*RGPRPG Trigger: ACCAGGACGTGGACCACGCCAGAAGTGACCAGCCCC...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATCCAAGCCTCCGTGGATaGAGAGCTTTGTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDPSLRG*RALSLL Trigger: CAGCAGGGACAAAGCTCTTCATCCACGGAGGCTTGG...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR TCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCCAATCTTGGCTCACTaGAACTTCCTCCTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHPILAH*NFLLLG Trigger: ACCCAGGAGGAGGAAGTTTCAGTGAGCCAAGATTGG...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR TCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCTGGTTTCAAACTCCTaGCCTCAGGTGATCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHLVSNS*PQVILP Trigger: TGGGAGGATCACCTGAGGTCAGGAGTTTGAAACCAG...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | TCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACGAGCTTTGTCCCTGCTaGCACCATCACATGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SECLRQTHAASCPARAGHELCPC*HHHMTM Trigger: CATGGTCATGTGATGGTGGCAGCAGGGACAAAGCTC...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR GCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCCCAGATCCATGGTGTaGACGTCTGAGAAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHPRSMV*TSEKLL Trigger: CAGAAGCTTCTCAGACGTGCACACCATGGATCTGGG...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | CAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGCCCAGATCCATGGTGTaGACGTCTGAGAAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVRVFASNTCSFVSCTGWPRSMV*TSEKLL Trigger: CAGAAGCTTCTCAGACGTGCACACCATGGATCTGGG...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACAATCTCATCCCCACGTaGCAGTTCTGCGGCGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHNLIPT*QFCGDL Trigger: TAAGTCGCCGCAGAACTGCCACGTGGGGATGAGATT...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATTGTTCTTGGGGATGGTaGGGGGCTGGTCACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDCSWGW*GAGHFW Trigger: CCAGAAGTGACCAGCCCCCCACCATCCCCAAGAACA...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACGCAGTGGCCCAATCTTaGCTCACTGAAACTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHAVAQS*LTETSS Trigger: GGAGGAAGTTTCAGTGAGCCAAGATTGGGCCACTGC...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR TCA 90 bp | GTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCTCTCTCCATGGTGTGCACGTCTaGGAAGCTTCTGTTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VCVKHMQLRVLHGLGTSLHGVHV*EASVWI Trigger: AATCCAAACAGAAGCTTCTCAGACGTGCACACCATG...GAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGTCCAATGGCTGCCGATaGTGTGTGGAATGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQSILASNTCSFVSCTGWSNGCR*CVECSW Trigger: CCAAGAACATTCCACACATCATCGGCAGCCATTGGA...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATTCCAAGACTGGCAGTTaGTTCATGGTGTCCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDSKTGS*FMVSCG Trigger: GCCGCAGGACACCATGAAGCAACTGCCAGTCTTGGA...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGCAAGGTGTACCATGTTaGTTTCCTGGGCTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQSILASNTCSFVSCTGWQGVPC*FPGLVS Trigger: GGAGACAAGCCCAGGAAAGCAACATGGTACACCTTG...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGGGGCAAGAGGCCCTTaGAGGTATCTAAGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDGARGP*RYLSPT Trigger: AGTGGGACTTAGATACCTGCAAGGGCCTCTTGCCCC...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGGGGCAAGAGGCCCTTaGAGGTATCTAAGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LAVTRSECLRQTHAASCPGARGP*RYLSPT Trigger: AGTGGGACTTAGATACCTGCAAGGGCCTCTTGCCCC...AGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACACCATGTTGCTTTCCTaGGCTTGTCTCCAGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHTMLLS*ACLQVP Trigger: TGGAACCTGGAGACAAGCCCAGGAAAGCAACATGGT...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACAGACCTTCCCTCTCTTaGCATTACCAACTGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHRPSLS*HYQLGV Trigger: TACCCCCAGTTGGTAATGCCAAGAGAGGGAAGGTCT...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR CCA 90 bp | AGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACGCTGCCGATGATGTGTaGAATGTTCTTGGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPYLRQTHAASCPARAGHAADDV*NVLGDG Trigger: ACCATCCCCAAGAACATTCCACACATCATCGGCAGC...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR CCA 90 bp | GTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCTCTCTCATAGCTGGTTTCCAATaGCTGCCGATGATGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCVKHMQLRVLHGLGTSLIAGFQ*LPMMCG Trigger: TCCACACATCATCGGCAGCCATTGGAAACCAGCTAT...GAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | AGAGTGAGAGAGTTGGAATCTTCTTTCTCAGAAGCACACGTCACTGGCCATGGAGGCAGCACAGCCTGCTaGAGCAGCCCCAGTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RVRELESSFSEAHVTGHGGSTAC*SSPSGI Trigger: AATCCCACTGGGGCTGCTCCAGCAGGCTGTGCTGCC...TCCATGGCCAGTGACGTGTGCTTCTGAGAAAGAAGATTCCAACTCTCTCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACTCACTGGCCATGGAATaGTACACATGGAATGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SECLRQTHAASCPARAGHSLAME*YTWNGP Trigger: TGGACCATTCCATGTGTATCATTCCATGGCCAGTGA...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR TCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATAAACTGGGATGGCCCTaGCCAGCCCCAAGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDKLGWP*PAPRCP Trigger: TGGGCACCTTGGGGCTGGTCAGGGCCATCCCAGTTT...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATTGCAGCTTCGTGTCCTaGACGGGCTGGGCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDCSFVS*TGWAPL Trigger: GAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCA...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR GCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATCTTGCGTCAAACACATaGAGCTTCGTGTCCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDLASNT*SFVSCT Trigger: CGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAG...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGAGATGGACATGTTGGTaGATGCTGGTAATCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQSILASNTCSFVSCTGWRWTCW*MLVIPA Trigger: AGCTGGGATTACCAGCATGCACCAACATGTCCATCT...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR CCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATACCATGCCGGGGAGATaGAGGATTTCCAAGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDTMPGR*RISKCL Trigger: GAGACACTTGGAAATCCTCCATCTCCCCGGCATGGT...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | GTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACCTCTCTCACACGTCACTGGCCATaGAATGATACACATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VCVKHMQLRVLHGLGTSLTRHWP*NDTHGM Trigger: CATTCCATGTGTATCATTCCATGGCCAGTGACGTGT...GAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGGTAAAAATTTTGGCTaGGTGTGGTGGCAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDGKNFG*VWWQRW Trigger: CCACCTCTGCCACCACACTCAGCCAAAATTTTTACC...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | CACCATGCCAGGCCTCACTATCCCTTTTTAAATGCCAATTTTGCTGTGGGAAAACCCACGTGGCAGTTCTaGGGCGACTTAGGCCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HHARPHYPFLNANFAVGKPTWQF*GDLGQS Trigger: CGACTGGCCTAAGTCGCCGCAGAACTGCCACGTGGG...TTTTCCCACAGCAAAATTGGCATTTAAAAAGGGATAGTGAGGCCTGGCATGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR GCA 90 bp | CTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTTTTGCGTCAAACACATaGAGCTTCGTGTCCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LAVTRSECLRQTHAASCPFASNT*SFVSCT Trigger: CGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAA...AGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGTACATTGTGTCCAGTaGTCCTGCAGGAGTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVTRSECLRQTHAASCPVHCVQ*SCRSHS Trigger: GGAATGACTCCTGCAGGAGCACTGGACACAATGTAC...AGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATAGAGCTCAGTTAGGCTaGCTTCACGTGGGCGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDRAQLG*LHVGGT Trigger: GGTCCCGCCCACGTGAAGCCAGCCTAACTGAGCTCT...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATAAATATGAACAGCTGTaGCCAACTCGAGCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDKYEQL*PTRAQG Trigger: CCCCTGTGCTCGAGTTGGCCACAGCTGTTCATATTT...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | GCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCAAGACCTTCCCTCTCTTaGCATTACCAACTGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AVTRSECLRQTHAASCPARPSLS*HYQLGV Trigger: TACCCCCAGTTGGTAATGCCAAGAGAGGGAAGGTCT...TGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | CCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTGTTCTTGGGGATGGTaGGGGGCTGGTCACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQRHIAGFQWLPMMCGMFCSWGW*GAGHFW Trigger: CCAGAAGTGACCAGCCCCCCACCATCCCCAAGAACA...GAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
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| CDS-3UTR CCA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTCCCGCCAAGCCTCCGTaGATGAAGAGCTTTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTGTLCPVLLQESFHQRCPAKPP*MKSFVP Trigger: AGGGACAAAGCTCTTCATCCACGGAGGCTTGGCGGG...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATCATGGTGTGCACGTCTaGGAAGCTTCTGTTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDHGVHV*EASVWI Trigger: AATCCAAACAGAAGCTTCTCAGACGTGCACACCATG...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGACAATTTCGATTTCCTaGTTGGTTGGCACCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HQSILASNTCSFVSCTGWTISIS*LVGTSK Trigger: TTTGGAGGTGCCAACCAATCAGGAAATCGAAATTGT...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR TCA 90 bp | TCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGGCACACAATTTCGATTTCCTaGTTGGTTGGCACCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SECLRQTHAASCPARAGHTISIS*LVGTSK Trigger: TTTGGAGGTGCCAACCAATCAGGAAATCGAAATTGT...GTGCCCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTTCCAAGACTGGCAGTTaGTTCATGGTGTCCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTGTLCPVLLQESFHQRCSKTGS*FMVSCG Trigger: GCCGCAGGACACCATGAAGCAACTGCCAGTCTTGGA...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTGAGAGAGTTGGAATCTTCTTTCTCAGAAGCACACGTCACTGGCCATGGACTGGCTTTCCTCATGTaGGTCACCACTGTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVRELESSFSEAHVTGHGLAFLM*VTTVAH Trigger: ATGAGCCACAGTGGTGACTCACATGAGGAAAGCCAG...TCCATGGCCAGTGACGTGTGCTTCTGAGAAAGAAGATTCCAACTCTCTCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | CTACAGTCACAATACAATCGTCATAGATTTCCCCTTCTGTATTCATCCCACCAATGCAGCTTCGTGTCCTaGACGGGCTGGGCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQSQYNRHRFPLLYSSHQCSFVS*TGWAPL Trigger: GAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTGCA...TTGGTGGGATGAATACAGAAGGGGAAATCTATGACGATTGTATTGTGACTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGTCTGGCTTGGGAATGTaGTATCTCTTAATTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQSILASNTCSFVSCTGWSGLGM*YLLIFP Trigger: TGGGAAAATTAAGAGATAGCACATTCCCAAGCCAGA...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGAGCAGCCCCAGTGGGATTTAGCTTCTGCCATTTCATGTCACTTATATAATCTCATCCCCACGTaGCAGTTCTGCGGCGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLEQPQWDLASAISCHLYNLIPT*QFCGDL Trigger: TAAGTCGCCGCAGAACTGCCACGTGGGGATGAGATT...ATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTCCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CTACAGTCACAATACAATCGTCATAGATTTCCCCTTCTGTATTCATCCCACCAAGGGGCTGGTCACTTCTaGCGTGGTCCACGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSQYNRHRFPLLYSSHQGAGHF*RGPRPG Trigger: ACCAGGACGTGGACCACGCCAGAAGTGACCAGCCCC...TTGGTGGGATGAATACAGAAGGGGAAATCTATGACGATTGTATTGTGACTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATCCAAAGACATATAGCTaGTTTCCAATGGCTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDPKTYS*FPMAAD Trigger: ATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGG...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTGAGAGAGTTGGAATCTTCTTTCTCAGAAGCACACGTCACTGGCCATGGACTGGAGCAGCCCCAGTaGGATTTAGCTTCTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: RVRELESSFSEAHVTGHGLEQPQ*DLASAI Trigger: AATGGCAGAAGCTAAATCCCACTGGGGCTGCTCCAG...TCCATGGCCAGTGACGTGTGCTTCTGAGAAAGAAGATTCCAACTCTCTCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| 3UTR CAA 72 bp | AGGTCCAATGCTGCTCTTCTGTGTGATACTGGTACATaGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSNAALLCDTGT*CPVLLQESFHQ Trigger: TTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATCACACAGAAGAGCAGCATTGGACCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR TCA 90 bp | CTACAGTCACAATACAATCGTCATAGATTTCCCCTTCTGTATTCATCCCACCAAGCTGCCACCATCACATaGCCATGCCGGGGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQYNRHRFPLLYSSHQAATIT*PCRGDG Trigger: TCCATCTCCCCGGCATGGTCATGTGATGGTGGCAGC...TTGGTGGGATGAATACAGAAGGGGAAATCTATGACGATTGTATTGTGACTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATCTTCATGGTTCAGAGTaGGAGAGTTGGAATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDLHGSE*ESWNLL Trigger: AAGAAGATTCCAACTCTCTCACTCTGAACCATGAAG...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTTGTGTCCAGTGCTCCTaGAGGAGTCATTCCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DTGTLCPVLLQESFHQRCCVQCS*RSHSTK Trigger: TTTGGTGGAATGACTCCTGCAGGAGCACTGGACACA...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATGTAGAGATGGGGTTTTaGCATGATGGCCAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDVEMGF*HDGQAG Trigger: ACCAGCCTGGCCATCATGGCAAAACCCCATCTCTAC...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTGAGAGAGTTGGAATCTTCTTTCTCAGAAGCACACGTCACTGGCCATGGAAAATATGAACAGCTGTaGCCAACTCGAGCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVRELESSFSEAHVTGHGKYEQL*PTRAQG Trigger: CCCCTGTGCTCGAGTTGGCCACAGCTGTTCATATTT...TCCATGGCCAGTGACGTGTGCTTCTGAGAAAGAAGATTCCAACTCTCTCACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCGCTGCCGATGATGTGTaGAATGTTCTTGGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQRHIAGFQWLPMMCGMFAADDV*NVLGDG Trigger: ACCATCCCCAAGAACATTCCACACATCATCGGCAGC...GAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CTACAGTCACAATACAATCGTCATAGATTTCCCCTTCTGTATTCATCCCACCAAATGGCCACAGCTGAGTaGGCAGCACAGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQYNRHRFPLLYSSHQMATAE*AAQPAG Trigger: TCCAGCAGGCTGTGCTGCCCACTCAGCTGTGGCCAT...TTGGTGGGATGAATACAGAAGGGGAAATCTATGACGATTGTATTGTGACTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGATTTCCAAGTGTCTCTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACAGAAGCACACGTCACTaGCCATGGAATGATACACAT | + |
|
Preference number: 4 (lower is better) Translates to: GGFPSVSGCDQVRVFASNRSTRH*PWNDTH Trigger: ATGTGTATCATTCCATGGCCAGTGACGTGTGCTTCT...GTTTGACGCAAACACTCTGACCTGGTCACAGCCAGAGACACTTGGAAATCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCGTTTTCCCAGATCCATaGTGTGCACGTCTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQRHIAGFQWLPMMCGMFVFPDP*CARLRS Trigger: GCTTCTCAGACGTGCACACCATGGATCTGGGAAAAC...GAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | GGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTACACATGTTTTCCCAGATCCATaGTGTGCACGTCTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTLCPVLLQESFHQRCTHVFPDP*CARLRS Trigger: GCTTCTCAGACGTGCACACCATGGATCTGGGAAAAC...ATGTGTACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGATTTCCAAGTGTCTCTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACGTATCTAAGTCCCACTaGTGTTTTCCCAGATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGFPSVSGCDQVRVFASNVSKSH*CFPRSM Trigger: CATGGATCTGGGAAAACACCAGTGGGACTTAGATAC...GTTTGACGCAAACACTCTGACCTGGTCACAGCCAGAGACACTTGGAAATCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGATTTCCAAGTGTCTCTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACGATTTCCTGATTGGTTaGCACCTCCAAATACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGFPSVSGCDQVRVFASNDFLIG*HLQIPR Trigger: TCTGGGTATTTGGAGGTGCCAACCAATCAGGAAATC...GTTTGACGCAAACACTCTGACCTGGTCACAGCCAGAGACACTTGGAAATCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTTTTCGATTTCCTGATTaGTTGGCACCTCCAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: LAVTRSECLRQTHAASCPFRFPD*LAPPNT Trigger: GGTATTTGGAGGTGCCAACCAATCAGGAAATCGAAA...AGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATATTAGATGGACATGTTaGTGCATGCTGGTAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDIRWTC*CMLVIP Trigger: TGGGATTACCAGCATGCACCAACATGTCCATCTAAT...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCCCCAGTGGGATTTAGCTTCTGCCATTTCATGTCACTTATATCAATGCTCCAATGGCTGCCGATaGTGTGTGGAATGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQPQWDLASAISCHLYQCSNGCR*CVECSW Trigger: CCAAGAACATTCCACACATCATCGGCAGCCATTGGA...GCATTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR TCA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTTGCTGCTCTTCTGTGTaGTACTGGTACATTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTGTLCPVLLQESFHQRCCCSSV*YWYIVS Trigger: GGACACAATGTACCAGTATCACACAGAAGAGCAGCA...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCCCACCAGTCCATACTTaGGTCAAACACATGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQRHIAGFQWLPMMCGMFPPVHT*VKHMQL Trigger: AAGCTGCATGTGTTTGACGCAAGTATGGACTGGTGG...GAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR GCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATTTGCCAAGGCTGGAGTaGAATGGCACGATCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDLPRLE*NGTILV Trigger: AACCAAGATCGTGCCATTGCACTCCAGCCTTGGCAA...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CCA 90 bp | GGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTACACATAGCAGTGTAGCAGTCTaGCTTTCCTCATGTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTLCPVLLQESFHQRCTHSSVAV*LSSCES Trigger: TGACTCACATGAGGAAAGCCAGACTGCTACACTGCT...ATGTGTACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATATGATACTTAGGATTTaGCAAGACAGTCCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSPPPKTYSWFPMAADDMILRI*QDSPKS Trigger: GGATTTTGGACTGTCTTGGCAAATCCTAAGTATCAT...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATATAGCTGGTTTCCAATaGCTGCCGATGATGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDIAGFQ*LPMMCG Trigger: TCCACACATCATCGGCAGCCATTGGAAACCAGCTAT...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATATGATACACATGGAATaGTCCAATCGTCCAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDMIHME*SNRPGG Trigger: ACCCCCTGGACGATTGGACCATTCCATGTGTATCAT...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | ACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTGGGGATGTATCTAAGTCCCACTaGTGTTTTCCCAGATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPMAADDVWNVLGDVSKSH*CFPRSM Trigger: CATGGATCTGGGAAAACACCAGTGGGACTTAGATAC...ATCCCCAAGAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTTCGATTTCCTGATTaGTTGGCACCTCCAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: PQRHIAGFQWLPMMCGMFFRFPD*LAPPNT Trigger: GGTATTTGGAGGTGCCAACCAATCAGGAAATCGAAA...GAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGCCCCAGTGGGATTTAGCTTCTGCCATTTCATGTCACTTATATCAATGCTCTTTCTCAGCTTCATaGTTCAGAGTGAGAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQPQWDLASAISCHLYQCSFSAS*FRVREL Trigger: CAACTCTCTCACTCTGAACCATGAAGCTGAGAAAGA...GCATTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CCA 90 bp | CACCATGCCAGGCCTCACTATCCCTTTTTAAATGCCAATTTTGCTGTGGGAAAAGATTTCCTGATTGGTTaGCACCTCCAAATACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHARPHYPFLNANFAVGKDFLIG*HLQIPR Trigger: TCTGGGTATTTGGAGGTGCCAACCAATCAGGAAATC...TTTTCCCACAGCAAAATTGGCATTTAAAAAGGGATAGTGAGGCCTGGCATGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCTTTTCCCAAATACTCTaGCTTGGGAATGTGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PQRHIAGFQWLPMMCGMFFSQIL*LGNVLS Trigger: AGATAGCACATTCCCAAGCCAGAGTATTTGGGAAAA...GAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATGTGTGGAATGTTCGTGGGATTTAGCTTCTaGCATTTCATGTCACTTATA | + |
|
Preference number: 4 (lower is better) Translates to: PQRHIAGFQWLPMMCGMFVGFSF*HFMSLI Trigger: TATAAGTGACATGAAATGGCAGAAGCTAAATCCCAC...GAACATTCCACACATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCAGCCCCAGTGGGATTTAGCTTCTGCCATTTCATGTCACTTATATCAAATGATACTTAGGATTTaGCAAGACAGTCCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LEQPQWDLASAISCHLYQMILRI*QDSPKS Trigger: GGATTTTGGACTGTCTTGGCAAATCCTAAGTATCAT...TTGATATAAGTGACATGAAATGGCAGAAGCTAAATCCCACTGGGGCTGCTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS TCA 90 bp | GTGGCAGTTCTAGGGGATAGGAGACGGGGTCGGGAAAGAACAGGCTaGTTCGGTCAAAGTGGCCGGGACGGAGCCAGGGAAGGCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VAVLGDRRRGRERTG*FGQSGRDGAREGPS Trigger: GGAAGGGCCTTCCCTGGCTCCGTCCCGGCCACTTTGACCGAATCAGCCTGTTCTTTCCCGACCCCGTCTCCTATCCCCTAGAACTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373538.8 ENST00000416065.1 |
||
| CDS-3UTR CAA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGCACGATCTTGGTTCATaGCCACCTCCGCCTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQSILASNTCSFVSCTGWHDLGS*PPPPPG Trigger: CCCGGGAGGCGGAGGTGGCAATGAACCAAGATCGTG...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CAA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGCGGGGCAAGAGGCCCTaGCAGGTATCTAAGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HQSILASNTCSFVSCTGWRGKRP*QVSKSH Trigger: GTGGGACTTAGATACCTGCAAGGGCCTCTTGCCCCG...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATCGGGGCAAGAGGCCCTaGCAGGTATCTAAGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSPPPKTYSWFPMAADDRGKRP*QVSKSH Trigger: GTGGGACTTAGATACCTGCAAGGGCCTCTTGCCCCG...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CAA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGTGGAGTATTGCTCTGTaGCCCAGGCTGAGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HQSILASNTCSFVSCTGWWSIAL*PRLSAV Trigger: CACTGCACTCAGCCTGGGCAACAGAGCAATACTCCA...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CAA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGCCCACCAGTCCATACTaGCGTCAAACACATGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQSILASNTCSFVSCTGWPTSPY*RQTHAA Trigger: AGCTGCATGTGTTTGACGCAAGTATGGACTGGTGGG...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CAA 90 bp | CACCAGTCCATACTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGTCAAGGTGTACCATGTaGCTTTCCTGGGCTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQSILASNTCSFVSCTGWSRCTM*LSWACL Trigger: GAGACAAGCCCAGGAAAGCAACATGGTACACCTTGA...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAGTATGGACTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373544.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGGGCTGGTCAAGGTGTACCATGTaGCTTTCCTGGGCTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVRVFASNTCSFVSCTGWSRCTM*LSWACL Trigger: GAGACAAGCCCAGGAAAGCAACATGGTACACCTTGA...CCAGCCCGTGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATAAGACCTTCCCTCTCTaGGCATTACCAACTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLSPPPKTYSWFPMAADDKTFPL*ALPTGG Trigger: ACCCCCAGTTGGTAATGCCAAGAGAGGGAAGGTCTT...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS TCA 90 bp | TGGCGTGGTCCACGTCCTGGTTTCCAGATCCATGGTGTGCACGTCTaGGAAGCTTCTGTTTGGATTTGCTCCCCCAACAATGAAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: WRGPRPGFQIHGVHV*EASVWICSPNNEDL Trigger: AAGGTCTTCATTGTTGGGGGAGCAAATCCAAACAGAAGCTTCTCAGACGTGCACACCATGGATCTGGAAACCAGGACGTGGACCACGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259460.12 |
||
| CDS-3UTR CAA 90 bp | CTGGCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTTGTGATACTGGTACATaGTGTCCAGTGCTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LAVTRSECLRQTHAASCPCDTGT*CPVLLQ Trigger: CTGCAGGAGCACTGGACACAATGTACCAGTATCACA...AGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTCTCCGCCCCCAAAGACATATAGCTGGTTTCCAATGGCTGCCGATGATCGATTTCCTGATTGGTaGGCACCTCCAAATACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLSPPPKTYSWFPMAADDRFPDW*APPNTQ Trigger: CTGGGTATTTGGAGGTGCCAACCAATCAGGAAATCG...ATCATCGGCAGCCATTGGAAACCAGCTATATGTCTTTGGGGGCGGAGAGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373544.5 ENST00000628863.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACGATTTCCTGATTGGTaGGCACCTCCAAATACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVTRSECLRQTHAASCPARFPDW*APPNTQ Trigger: CTGGGTATTTGGAGGTGCCAACCAATCAGGAAATCG...TGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTGACCAGGTCAGAGTGTTTGCGTCAAACACATGCAGCTTCGTGTCCTGCACTGTGGCTCATTACTTaGTCAGCTGAATCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: AVTRSECLRQTHAASCPALWLIT*SAESSF Trigger: GAAAGAGGATTCAGCTGACAAAGTAATGAGCCACAG...TGCAGGACACGAAGCTGCATGTGTTTGACGCAAACACTCTGACCTGGTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CAA 90 bp | GATACTGGTACATTGTGTCCAGTGCTCCTGCAGGAGTCATTCCACCAAAGATGTACCAGGTCAGAGTGTTaGCGTCAAACACATGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: DTGTLCPVLLQESFHQRCTRSEC*RQTHAA Trigger: AGCTGCATGTGTTTGACGCAAACACTCTGACCTGGT...ACATCTTTGGTGGAATGACTCCTGCAGGAGCACTGGACACAATGTACCAGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CAA 90 bp | CTACAGTCACAATACAATCGTCATAGATTTCCCCTTCTGTATTCATCCCACCAAAAGACCTTCCCTCTCTaGGCATTACCAACTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LQSQYNRHRFPLLYSSHQKTFPL*ALPTGG Trigger: ACCCCCAGTTGGTAATGCCAAGAGAGGGAAGGTCTT...TTGGTGGGATGAATACAGAAGGGGAAATCTATGACGATTGTATTGTGACTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000628863.2 |
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| CDS-3UTR CAA 90 bp | CACCATGCCAGGCCTCACTATCCCTTTTTAAATGCCAATTTTGCTGTGGGAAAACTGAGAAGCTTCTGTTaGGATTTGCTCCCCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: HHARPHYPFLNANFAVGKLRSFC*DLLPQQ Trigger: TTGTTGGGGGAGCAAATCCAAACAGAAGCTTCTCAG...TTTTCCCACAGCAAAATTGGCATTTAAAAAGGGATAGTGAGGCCTGGCATGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS-3UTR CAA 90 bp | CACCATGCCAGGCCTCACTATCCCTTTTTAAATGCCAATTTTGCTGTGGGAAAACCCAAATACTCTGGCTaGGGAATGTGCTATCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: HHARPHYPFLNANFAVGKPKYSG*GMCYLL Trigger: TAAGAGATAGCACATTCCCAAGCCAGAGTATTTGGG...TTTTCCCACAGCAAAATTGGCATTTAAAAAGGGATAGTGAGGCCTGGCATGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373544.5 |
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| CDS CCA 72 bp | ACGGGGTCGGGAAAGAACAGGCTGATTCGGTCAAAGTaGCCGGGACGGAGCCAGGGAAGGCCCTTCCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: TGSGKNRLIRSK*PGRSQGRPFPV Trigger: AACGGGGAAGGGCCTTCCCTGGCTCCGTCCCGGCCACTTTGACCGAATCAGCCTGTTCTTTCCCGACCCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373538.8 ENST00000416065.1 |
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| CDS TCA 72 bp | CTAGGGGATAGGAGACGGGGTCGGGAAAGAACAGGCTaGTTCGGTCAAAGTGGCCGGGACGGAGCCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGDRRRGRERTG*FGQSGRDGARE Trigger: TTCCCTGGCTCCGTCCCGGCCACTTTGACCGAATCAGCCTGTTCTTTCCCGACCCCGTCTCCTATCCCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373538.8 ENST00000416065.1 |
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| CDS GCA 72 bp | GGCGTGGTCCACGTCCTGGTTTCCAGATCCATGGTGTaGACGTCTGAGAAGCTTCTGTTTGGATTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GVVHVLVSRSMV*TSEKLLFGFAP Trigger: GGGAGCAAATCCAAACAGAAGCTTCTCAGACGTGCACACCATGGATCTGGAAACCAGGACGTGGACCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259460.12 |
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| CDS CCA 72 bp | CTCCAGGGACAGTCAAGGTGTACCATGTTGCTTTCCTaGGCTTGTCTCCAGGTTCCAAGACTGGCAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LQGQSRCTMLLS*ACLQVPRLAVA Trigger: AGCAACTGCCAGTCTTGGAACCTGGAGACAAGCCCAGGAAAGCAACATGGTACACCTTGACTGTCCCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000259460.12 ENST00000373538.8 ENST00000373544.5 ENST00000394125.8 ENST00000628863.2 |
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| CDS CAA 90 bp | CAGGAGGGAATGAAGCTAGCATGTTCATACCGGGGCAAGAGGCCCTaGCAGGTATCTAAGTCCCACTGGTGTTTTCCCAGATCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: QEGMKLACSYRGKRP*QVSKSHWCFPRSMV Trigger: CACCATGGATCTGGGAAAACACCAGTGGGACTTAGATACCTGCAAGGGCCTCTTGCCCCGGTATGAACATGCTAGCTTCATTCCCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000373538.8 ENST00000373544.5 ENST00000394125.8 ENST00000416065.1 ENST00000628863.2 |
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| CDS TCA 72 bp | CCACGTCCTGGTTTCCAGATCCATGGTGTGCACGTCTaGGAAGCTTCTGTTTGGATTTGCTCCCCCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: PRPGFQIHGVHV*EASVWICSPNN Trigger: ATTGTTGGGGGAGCAAATCCAAACAGAAGCTTCTCAGACGTGCACACCATGGATCTGGAAACCAGGACGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259460.12 |
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| CDS CAA 72 bp | ATGAAGCTAGCATGTTCATACCGGGGCAAGAGGCCCTaGCAGGTATCTAAGTCCCACTGGTGTTTTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: MKLACSYRGKRP*QVSKSHWCFPR Trigger: TCTGGGAAAACACCAGTGGGACTTAGATACCTGCAAGGGCCTCTTGCCCCGGTATGAACATGCTAGCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000373538.8 ENST00000373544.5 ENST00000394125.8 ENST00000416065.1 ENST00000628863.2 |
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| CDS TCA 72 bp | CCACTGGTGTTTTCCCAGATCCATGGTGTGCACGTCTaGGAAGCTTCTGTTTGGATTTGCTCCCCCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: PLVFSQIHGVHV*EASVWICSPNN Trigger: ATTGTTGGGGGAGCAAATCCAAACAGAAGCTTCTCAGACGTGCACACCATGGATCTGGGAAAACACCAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000373538.8 ENST00000373544.5 ENST00000394125.8 ENST00000416065.1 ENST00000628863.2 |
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| CDS GCA 72 bp | TCTAAGTCCCACTGGTGTTTTCCCAGATCCATGGTGTaGACGTCTGAGAAGCTTCTGTTTGGATTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SKSHWCFPRSMV*TSEKLLFGFAP Trigger: GGGAGCAAATCCAAACAGAAGCTTCTCAGACGTGCACACCATGGATCTGGGAAAACACCAGTGGGACTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000373538.8 ENST00000373544.5 ENST00000394125.8 ENST00000416065.1 ENST00000628863.2 |
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