RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RABEP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000177548

Ensembl transcript IDs: ENST00000357573.10, ENST00000358201.9, ENST00000544477.5, ENST00000561501.5, ENST00000561803.5, ENST00000562475.5, ENST00000562590.5, ENST00000563577.1, ENST00000564473.5, ENST00000564579.1, ENST00000566762.1, ENST00000567483.5, ENST00000568703.5, ENST00000570030.1

Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTGTCATaGAGACCAGAAGGCAGCTGCCTGTCCCAGGGCCGGGGCCCACCT +
Preference number: 1 (lower is better)
Translates to: AWRPGSPLWTSVLVS*RPEGSCLSQGRGPP
Trigger: AGGTGGGCCCCGGCCCTGGGACAGGCAGCTGCCTTCTGGTCTGCATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR CCA 90 bp GAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTaGGCCCCTCACCCAGGTGTGATCCCTGAGAACAGGAGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: ESRRPEPAPLVPGGA*APHPGVIPENRRPS
Trigger: GCTGGGCCTCCTGTTCTCAGGGATCACACCTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR CCA 90 bp AACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTaGGTCGCCGCTGTGGACAAGCGTCTTAGTGTCATGCAGACCAGA +
Preference number: 1 (lower is better)
Translates to: NDGKVWPCLCASLEA*VAAVDKRLSVMQTR
Trigger: TCTGGTCTGCATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR CAA 90 bp GAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTaGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAGGTGTGATCCCT +
Preference number: 2 (lower is better)
Translates to: EAAQQPESRRPEPAP*VPGGAWAPHPGVIP
Trigger: AGGGATCACACCTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR GCA 90 bp GTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGAGACCAGAAGGCAGCTaGCTGTCCCAGGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: VWPCLCASLEAWVAAVDKRPEGS*LSQGRG
Trigger: GCCCCGGCCCTGGGACAGGCAGCTGCCTTCTGGTCT...CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR CCA 90 bp GCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAGGCGTCTTTCCCAGGGTaGGGGTGGGGATATCCTGAC +
Preference number: 2 (lower is better)
Translates to: AGLSLHLWFREGLGPLTQASFPG*GWGYPD
Trigger: GTCAGGATATCCCCACCCCCACCCTGGGAAAGACGC...CTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR TCA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGCCTGCTTCAGGGCGGTaGTCTGGGCTTCATAGCTGC +
Preference number: 2 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQAPASGR*SGLHSC
Trigger: GCAGCTATGAAGCCCAGATCACCGCCCTGAAGCAGG...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
3UTR-3UTR GCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCTTCTCCTCACAGTCCTaGTGCTGCTGCTGTCGCTCC +
Preference number: 2 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGFSSQS*CCCCRS
Trigger: GGAGCGACAGCAGCAGCAGCAGGACTGTGAGGAGAA...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
3UTR-3UTR TCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCTGCCCAGGCTGGTCTTaGACTCCTGAGCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGCPGWS*TPELKQ
Trigger: TTGCTTGAGCTCAGGAGTTCAAGACCAGCCTGGGCA...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
3UTR-3UTR TCA 90 bp TCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCCAGGGCTTCATAGCTGCTaGTGGAGTCATGTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: SPGSPGGRPGTAAASGGPGLHSC*WSHVAQ
Trigger: CTGGGCAACATGACTCCATCAGCAGCTATGAAGCCC...TGGGCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
3UTR-3UTR TCA 90 bp GTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGAGAAAGCCGCAGGCCTaGGCCTGCACCTTTGGTTCC +
Preference number: 2 (lower is better)
Translates to: VWPCLCASLEAWVAAVDKRKPQA*ACTFGS
Trigger: GGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCT...CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR CCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGCGTCTTTCCCAGGGTaGGGGTGGGGATATCCTGAC +
Preference number: 2 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGASFPG*GWGYPD
Trigger: GTCAGGATATCCCCACCCCCACCCTGGGAAAGACGC...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
3UTR CAA 90 bp TTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTaGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTGTCATG +
Preference number: 2 (lower is better)
Translates to: LKINDGKVWPCLCAS*EAWVAAVDKRLSVM
Trigger: CATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR CCA 90 bp TGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGGACTCCCAGCCCCCATaGCTCCGCTGTGCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: CLFIENKRRKSLALPLCKDSQPP*LRCALG
Trigger: GCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTC...CTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR CAA 90 bp CTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTaGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAA +
Preference number: 2 (lower is better)
Translates to: LSCLFIENKRRKSLA*PLCKLGGLGRRCGQ
Trigger: TTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR CCA 90 bp AGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCCTGAGCCTGCACCTTTaGTTCCGGGAGGGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: SCLFIENKRRKSLALPLCLSLHL*FREGLG
Trigger: CCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAG...GCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR TCA 90 bp AGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAGAAAGCCGCAGGCCTaGGCCTGCACCTTTGGTTCC +
Preference number: 2 (lower is better)
Translates to: SCLFIENKRRKSLALPLCRKPQA*ACTFGS
Trigger: GGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCT...GCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR CCA 90 bp AGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCCTCATGGTTCAGGAGTaGGGAAAGGCGTCTTTCCCA +
Preference number: 2 (lower is better)
Translates to: SCLFIENKRRKSLALPLCLMVQE*GKASFP
Trigger: TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAG...GCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR GCA 72 bp CCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTGTCATaGAGACCAGAAGGCAGCTGCCTGTCCCAGGGCCGG +
Preference number: 3 (lower is better)
Translates to: PGSPLWTSVLVS*RPEGSCLSQGR
Trigger: CCGGCCCTGGGACAGGCAGCTGCCTTCTGGTCTGCATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR CCA 72 bp AGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTaGGCCCCTCACCCAGGTGTGATCCCTGAGAACAGG +
Preference number: 3 (lower is better)
Translates to: RPEPAPLVPGGA*APHPGVIPENR
Trigger: CCTGTTCTCAGGGATCACACCTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR GCA 72 bp ACAAGCGTCTTAGTGTCATGCAGACCAGAAGGCAGCTaGCTGTCCCAGGGCCGGGGCCCACCTCACTGCCTC +
Preference number: 3 (lower is better)
Translates to: TSVLVSCRPEGS*LSQGRGPPHCL
Trigger: GAGGCAGTGAGGTGGGCCCCGGCCCTGGGACAGGCAGCTGCCTTCTGGTCTGCATGACACTAAGACGCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR CAA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCTGATGGAGTCATGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQAADGVM*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACATGACTCCATCAGC...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
3UTR CCA 72 bp GCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTaGACAAGCGTCTTAGTGTCATGCAGACCAGAAGGC +
Preference number: 3 (lower is better)
Translates to: ASVQAWRPGSPL*TSVLVSCRPEG
Trigger: GCCTTCTGGTCTGCATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR CCA 72 bp ACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTaGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTA +
Preference number: 3 (lower is better)
Translates to: TTEKSGLASVQA*RPGSPLWTSVL
Trigger: TAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR CCA 72 bp AAAGTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTaGGTCGCCGCTGTGGACAAGCGTCTTAGTGTCATG +
Preference number: 3 (lower is better)
Translates to: KVWPCLCASLEA*VAAVDKRLSVM
Trigger: CATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR-3UTR CAA 90 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGCCTGAGCCTGCACCTTaGGTTCCGGGAGGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: YLLKINDGKVWPCLCASLPEPAP*VPGGAW
Trigger: CCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGG...CAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
3UTR GCA 72 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTaGCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCT +
Preference number: 3 (lower is better)
Translates to: YLLKINDGKVWP*LCASLEAWVAA
Trigger: AGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGCCACCTCACTGCCTCTaGTGGGGACTCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGPPHCL*WGLPAP
Trigger: GGGGGCTGGGAGTCCCCATCAGAGGCAGTGAGGTGG...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCGCCCGGGACAGCAGCTaGTTCAGGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGARDSS*FRRPSS
Trigger: GGAGCTGGGCCGCCTGAAGCAGCTGCTGTCCCGGGC...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR CCA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGTCCTGCTGCGAGCCCTaGGGGGCTGAGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGSCCEP*GAEDGS
Trigger: GCTGCCATCCTCAGCCCCCCAGGGCTCGCAGCAGGA...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGCCGCAGCAGCTGCTCTaGGTTCTGGACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGPQQLL*VLDLGQ
Trigger: CTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGG...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGGATTCCTCCTCGCCCTaGTCCTGCTGCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGDSSSP*SCCEPW
Trigger: CCAGGGCTCGCAGCAGGAGCAGGGCGAGGAGGAATC...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTCCCATGGCTCCGCTGTaGCCTGGGCAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QQPESRRPEPAPLVPGGAPMAPL*PGQGTG
Trigger: GCCCGTCCCCTGCCCAGGGCACAGCGGAGCCATGGG...AGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAGAGGCCCTGGCGGCTTTaGGGCAGGGAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGLSLHLWFREGLGPLTQRPWRL*GREELL
Trigger: CAGCAGCTCCTCCCTGCCCCAAAGCCGCCAGGGCCT...CTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAAGCTGCACCCGCTCCTaGGCCTGGCTCACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RRPEPAPLVPGGAWAPHPSCTRS*AWLTVP
Trigger: AGGGACCGTGAGCCAGGCCCAGGAGCGGGTGCAGCT...TGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGCAGCCTCGGCCTTCGTaGTCTCGCTCACCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGQPRPS*SRSPLP
Trigger: TGGCAGAGGTGAGCGAGAGCACGAAGGCCGAGGCTG...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCATCTTGGCACTGCCGCTaGACCGCAGCCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: RRPEPAPLVPGGAWAPHPSWHCR*TAATAS
Trigger: CGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGA...TGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCTCTTGGCACTGCCGCTaGACCGCAGCCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGSWHCR*TAATAS
Trigger: CGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGA...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTCGGGCCCTCGCCTCTTaGCGCGTGCAGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQPESRRPEPAPLVPGGARALAS*RVQHSS
Trigger: GCTGCTGTGCTGCACGCGGCAAGAGGCGAGGGCCCG...AGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCCGTGCTCCTGGGCCTaGAGCCGGGCCCTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: VWPCLCASLEAWVAAVDKPCSWA*SRALAS
Trigger: AGAGGCGAGGGCCCGGCTGCAGGCCCAGGAGCACGG...CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CCCAGGAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGGACTCCCAGCCCCCATaGCTCCGCTGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRRQHSSQKAAGLSLHLWDSQPP*LRCALG
Trigger: GCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTC...CCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp GCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAGCCGGCTGAGCTCACCTaGCTCGGCCTCACCATTTGC +
Preference number: 4 (lower is better)
Translates to: AGLSLHLWFREGLGPLTQPAELT*LGLTIC
Trigger: GCAAATGGTGAGGCCGAGTCAGGTGAGCTCAGCCGG...CTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCAGCCTCGGCCTTCGTaGTCTCGCTCACCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGQPRPS*SRSPLP
Trigger: TGGCAGAGGTGAGCGAGAGCACGAAGGCCGAGGCTG...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAACCTCCTCTTGGCACTaGCGCTGCACCGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RRPEPAPLVPGGAWAPHPTSSWH*RCTAAT
Trigger: TGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGT...TGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTCCGTGCTCCTGGGCCTaGAGCCGGGCCCTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGPCSWA*SRALAS
Trigger: AGAGGCGAGGGCCCGGCTGCAGGCCCAGGAGCACGG...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp TCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCCACCGGGAGTCCTCCAGTaGTGTGGGGGACAGGGATCA +
Preference number: 4 (lower is better)
Translates to: SPGSPGGRPGTAAASGGPPGVLQ*CGGQGS
Trigger: TGATCCCTGTCCCCCACAGCACTGGAGGACTCCCGG...TGGGCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR CCA 90 bp GAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGCTCCAGCGGGGGCGATaGATCCCGGGACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EASWFRSGERRLSQGGGGLQRGR*IPGQGQ
Trigger: CTGCCCCTGTCCCGGGATCCATCGCCCCCGCTGGAG...CCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAGTGGTGCAGGCACTTGTaGGTGGTGACCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AGLSLHLWFREGLGPLTQWCRHL*VVTSSA
Trigger: GGCGGAGCTGGTCACCACCCACAAGTGCCTGCACCA...CTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCACTGAGCCTGCACCTTTaGTTCCGGGAGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RRPEPAPLVPGGAWAPHPLSLHL*FREGLG
Trigger: CCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAG...TGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGGACTCCCAGCCCCCATaGCTCCGCTGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGDSQPP*LRCALG
Trigger: GCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTC...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp GGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCCAGCTCCCGCGCTGGATCAGACTCTaGGCTGGGCTCTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GVQGVGPGQQLLQAAQLPRWIRL*AGLFQD
Trigger: ATCCTGAAAGAGCCCAGCTCAGAGTCTGATCCAGCG...CGGGAGCTGGGCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGCTCGGCCTCACCATTTaGCCCTTCCTGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQALGLTI*PFLGPG
Trigger: TCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAG...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGACCTCCTCTTGGCACTaGCGCTGCACCGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQATSSWH*RCTAAT
Trigger: TGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGT...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCCAGTCCTGCTGCTGCTaGTGTCGCTCCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLQGVQGVGPGQQLLQAAQSCCC*CRSCFR
Trigger: CCTGAAGCAGGAGCGACAGCAGCAGCAGCAGGACTG...GGCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CCCAGGAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGAACTCCGTGGAGCCGTaGAGGGAAGGGGCATGCCGG +
Preference number: 4 (lower is better)
Translates to: PRRQHSSQKAAGLSLHLWNSVEP*REGACR
Trigger: CCGGCATGCCCCTTCCCTGCACGGCTCCACGGAGTT...CCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGTCCGCCATCTGCAGCTaGACCCGCTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VWPCLCASLEAWVAAVDKSAICS*TRSWAW
Trigger: CCAGGCCCAGGAGCGGGTGCAGCTGCAGATGGCGGA...CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGCCGTGCTCCTGGGCCTaGAGCCGGGCCCTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GGKAIQDPRARPHGSGVGPCSWA*SRALAS
Trigger: AGAGGCGAGGGCCCGGCTGCAGGCCCAGGAGCACGG...CCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGCGCTGCACCCTCAGCTaGCCCTCCAGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PERGLMVQEWGKASFPGWRCTLS*PSRLAL
Trigger: CAGGGCCAGCCTGGAGGGGCAGCTGAGGGTGCAGCG...CCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGATGATGCTGCGCACTTaGTCCAGGGTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGMMLRT*SRVSAW
Trigger: CCAGGCTGAGACCCTGGAGCAAGTGCGCAGCATCAT...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCCATTTGCCCCTTCCTaGGACCGGGAGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGPFAPS*DRESSS
Trigger: ACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGG...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR CCA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGTCTGAGTTCTGGACCTaGGCCAGGAGCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGSEFWT*ARSTCI
Trigger: GATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGA...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGACCCGCTCCTGGGCCTaGCTCACGGTCCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VWPCLCASLEAWVAAVDKTRSWA*LTVPCR
Trigger: CCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCGGGT...CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGACCCGCTCCTGGGCCTaGCTCACGGTCCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EASWFRSGERRLSQGGGGTRSWA*LTVPCR
Trigger: CCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCGGGT...CCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCAGTCCTCCAGTGCTGTaGGGGACAGGGATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGSPPVL*GTGISL
Trigger: GAGGCTGATCCCTGTCCCCCACAGCACTGGAGGACT...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR CCA 90 bp GCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCTGGGCTCTTTCAGGATaGCCTGCAGCGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ASPGSPGGRPGTAAASGGWALSG*PAARPP
Trigger: AGGTGGCCTCGCTGCAGGCCATCCTGAAAGAGCCCA...GCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR TCA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGCGTCCCGCTCGCGACTaGCGCTCTCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGRPARD*RSPGPS
Trigger: AGAAGGACCTGGAGAGCGTCAGTCGCGAGCGGGACG...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTCTGCCAGGGCGCCTaGCAGCTCAGCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVFCQGA*QLSPKP
Trigger: CGGCTTCGGGCTGAGCTGGCAGGCGCCCTGGCAGAA...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCCATGGTTTCCATTTCTaGCAGGGCGCCTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLQGVQGVGPGQQLLQAAHGFHF*QGACQL
Trigger: GAGCTGGCAGGCGCCCTGGCAGAAATGGAAACCATG...GGCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CCCAGGAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGACCTCCTCTTGGCACTaGCGCTGCACCGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PRRQHSSQKAAGLSLHLWTSSWH*RCTAAT
Trigger: TGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGT...CCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp TCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGCCCATCTTTCAGGATGGCCTaGAGCGAGGCCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SPGSPGGRPGTAAASGGPSFRMA*SEATSS
Trigger: AGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGA...TGGGCCGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGTCCTCACAGTCCTGCTaGTGCTGCTGTCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQASSQSC*CCCRSC
Trigger: GCAGGAGCGACAGCAGCAGCAGCAGGACTGTGAGGA...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGGCCCGGGACAGCAGCTaGTTCAGGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRARDSS*FRRPSS
Trigger: GGAGCTGGGCCGCCTGAAGCAGCTGCTGTCCCGGGC...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCGCTGAGGATGGCAGCTaGTCGGCCCGGAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVAEDGS*SARSPW
Trigger: CCAAGGGCTCCGGGCCGAGCAGCTGCCATCCTCAGC...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATCGCTGCACCCTCAGCTaGCCCTCCAGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHRCTLS*PSRLAL
Trigger: CAGGGCCAGCCTGGAGGGGCAGCTGAGGGTGCAGCG...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTCGCTCTAGGCGCACCTaGAGGGCCTGGGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGRSRRT*RAWDSR
Trigger: GCGACTGTCCCAGGCCCTGCAGGTGCGCCTAGAGCG...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCCCCATGGCTCCGCTGTaGCCTGGGCAGGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGPMAPL*PGQGTG
Trigger: GCCCGTCCCCTGCCCAGGGCACAGCGGAGCCATGGG...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCAGACCAGAAGGCAGCTaGCTGTCCCAGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVRPEGS*LSQGRG
Trigger: GCCCCGGCCCTGGGACAGGCAGCTGCCTTCTGGTCT...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCTCCAGCGGGGGCGATaGATCCCGGGACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSLQRGR*IPGQGQ
Trigger: CTGCCCCTGTCCCGGGATCCATCGCCCCCGCTGGAG...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTAGCTGCACCCGCTCCTaGGCCTGGCTCACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGSCTRS*AWLTVP
Trigger: AGGGACCGTGAGCCAGGCCCAGGAGCGGGTGCAGCT...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGCTGCCCCTCCAGGCTaGCCCTGGCCACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGAAPPG*PWPLSP
Trigger: AGGAGACAGTGGCCAGGGCCAGCCTGGAGGGGCAGC...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCCAGGAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGCGCACCTGCAGGGCCTaGGACAGTCGCACGAAATCC +
Preference number: 4 (lower is better)
Translates to: PRRQHSSQKAAGLSLHLWRTCRA*DSRTKS
Trigger: GGATTTCGTGCGACTGTCCCAGGCCCTGCAGGTGCG...CCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCACAGAGCGAGGCCTCATaGTTCAGGAGTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RRPEPAPLVPGGAWAPHPQSEAS*FRSGER
Trigger: CCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG...TGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTGGGCCCCTCACCCAGCCTGGGTCGCCGCTGTaGACAAGCGTCTTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: AGLSLHLWFREGLGPLTQPGSPL*TSVLVS
Trigger: TGACACTAAGACGCTTGTCCACAGCGGCGACCCAGG...CTGGGTGAGGGGCCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGTGCAGCTGCTCCCACTaGGTGTCTGGGACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGCSCSH*VSGTSW
Trigger: CCAGCTCGTCCCAGACACTCAGTGGGAGCAGCTGCA...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp GAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGGCACTTGTGGGTGGTaGCCAGCTCCGCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: EASWFRSGERRLSQGGGGGTCGW*PAPPSA
Trigger: TGCAGATGGCGGAGCTGGTCACCACCCACAAGTGCC...CCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCATCCCGCACTCCCTGGTaGCGGAGCGCACCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPSRTPW*RSAPLP
Trigger: CGGAAGCGGTGCGCTCCGTCACCAGGGAGTGCGGGA...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358201.9
CDS-3UTR TCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGGCTTCATAGCTGCTaGTGGAGTCAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGGLHSC*WSQPPA
Trigger: GGCCGGGGGCTGACTCCATCAGCAGCTATGAAGCCC...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTTCTTGGCACTGCCGCTaGACCGCAGCCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGSWHCR*TAATAS
Trigger: CGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGA...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGTTCTCCTCACAGTCCTaGTGCTGCTGCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQAFSSQS*CCCCRS
Trigger: GGAGCGACAGCAGCAGCAGCAGGACTGTGAGGAGAA...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTGCCCGGGACAGCAGCTaGTTCAGGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPRPQSEASWFRSGERRLARDSS*FRRPSS
Trigger: GGAGCTGGGCCGCCTGAAGCAGCTGCTGTCCCGGGC...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp TCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCGCCCGGGACAGCAGCTaGTTCAGGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQGRWKSHPRPQSEASWFARDSS*FRRPSS
Trigger: GGAGCTGGGCCGCCTGAAGCAGCTGCTGTCCCGGGC...GAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGTGGCTCACGGTCCCTTaGAGGGTCCGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGWLTVP*RVRSSC
Trigger: GCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCA...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTTGGCTCACGGTCCCTTaGAGGGTCCGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PQSEASWFRSGERRLSQGWLTVP*RVRSSC
Trigger: GCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCA...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTGGCTCACGGTCCCTTaGAGGGTCCGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVWLTVP*RVRSSC
Trigger: GCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCA...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTCGGGCCCTCGCCTCTTaGCGCGTGCAGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRWKSHPRPQSEASWFRSRALAS*RVQHSS
Trigger: GCTGCTGTGCTGCACGCGGCAAGAGGCGAGGGCCCG...ACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCACGCTGCACCCTCAGCTaGCCCTCCAGGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSRCTLS*PSRLAL
Trigger: CAGGGCCAGCCTGGAGGGGCAGCTGAGGGTGCAGCG...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATCGCTCTAGGCGCACCTaGAGGGCCTGGGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHRSRRT*RAWDSR
Trigger: GCGACTGTCCCAGGCCCTGCAGGTGCGCCTAGAGCG...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGACCAGAAGGCAGCTaGCTGTCCCAGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRRPEGS*LSQGRG
Trigger: GCCCCGGCCCTGGGACAGGCAGCTGCCTTCTGGTCT...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CCCAGGAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGCCATTTGCCCCTTCCTaGGACCGGGAGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PRRQHSSQKAAGLSLHLWPFAPS*DRESSS
Trigger: ACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGG...CCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGAGGCCACCTCCTCTTaGCACTGCCGCTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: PQSEASWFRSGERRLSQGEATSS*HCRCTA
Trigger: TGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTC...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGGGCAGCAACTCCGTaGAGCCGTGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHGAATP*SRAGKG
Trigger: CCCCTTCCCTGCACGGCTCCACGGAGTTGCTGCCCC...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTCTCCAGCGGGGGCGATaGATCCCGGGACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRWKSHPRPQSEASWFRSLQRGR*IPGQGQ
Trigger: CTGCCCCTGTCCCGGGATCCATCGCCCCCGCTGGAG...ACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTAGGCCCTGGCGGCTTTaGGGCAGGGAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSKTPERGLMVQEWGKASRPWRL*GREELL
Trigger: CAGCAGCTCCTCCCTGCCCCAAAGCCGCCAGGGCCT...AGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTACCCGCTCCTGGGCCTaGCTCACGGTCCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRTRSWA*LTVPCR
Trigger: CCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCGGGT...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCAGCTGCACCCGCTCCTaGGCCTGGCTCACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSSCTRS*AWLTVP
Trigger: AGGGACCGTGAGCCAGGCCCAGGAGCGGGTGCAGCT...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCTCCTGCTGCGAGCCCTaGGGGGCTGAGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSSCCEP*GAEDGS
Trigger: GCTGCCATCCTCAGCCCCCCAGGGCTCGCAGCAGGA...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGGCTGCCCCTCCAGGCTaGCCCTGGCCACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGKAIQDPRARPHGSGVGAAPPG*PWPLSP
Trigger: AGGAGACAGTGGCCAGGGCCAGCCTGGAGGGGCAGC...CCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGCCTGCTTCAGGGCGGTaGTCTGGGCTTCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGPASGR*SGLHSC
Trigger: GCAGCTATGAAGCCCAGATCACCGCCCTGAAGCAGG...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGCCGCAGCAGCTGCTCTaGGTTCTGGACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEPQQLL*VLDLGQ
Trigger: CTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGG...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp GGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGCCGCAGCAGCTGCTCTaGGTTCTGGACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGKAIQDPRARPHGSGVGPQQLL*VLDLGQ
Trigger: CTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGG...CCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTCACAGAGCTGGGCAGTaGTTCCTCCTCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQSEASWFRSGERRLSQGHRAGQ*FLLALL
Trigger: GAGCAGGGCGAGGAGGAATCACTGCCCAGCTCTGTG...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCCCACCTCACTGCCTCTaGTGGGGACTCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGPPHCL*WGLPAP
Trigger: GGGGGCTGGGAGTCCCCATCAGAGGCAGTGAGGTGG...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCGTCCCGCTCGCGACTaGCGCTCTCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRRPARD*RSPGPS
Trigger: AGAAGGACCTGGAGAGCGTCAGTCGCGAGCGGGACG...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGGGGCTTCATAGCTGCTaGTGGAGTCATGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQAGLHSC*WSHVAQ
Trigger: CTGGGCAACATGACTCCATCAGCAGCTATGAAGCCC...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR GCA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTTCTGCCAGGGCGCCTaGCAGCTCAGCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: HPRPQSEASWFRSGERRLFCQGA*QLSPKP
Trigger: CGGCTTCGGGCTGAGCTGGCAGGCGCCCTGGCAGAA...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTCATGGTTTCCATTTCTaGCAGGGCGCCTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQPESRRPEPAPLVPGGAHGFHF*QGACQL
Trigger: GAGCTGGCAGGCGCCCTGGCAGAAATGGAAACCATG...AGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCAACTCCGTGGAGCCGTaGAGGGAAGGGGCATGCCGG +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSNSVEP*REGACR
Trigger: CCGGCATGCCCCTTCCCTGCACGGCTCCACGGAGTT...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGGAGGGGGCAGGTAGATaGCCTCGGGAACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEEGAGR*PREPGC
Trigger: GCACCCTGGTTCCCGAGGGCATCTACCTGCCCCCTC...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCATCCGCCATCTGCAGCTaGACCCGCTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPSAICS*TRSWAW
Trigger: CCAGGCCCAGGAGCGGGTGCAGCTGCAGATGGCGGA...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCTCCGCCATCTGCAGCTaGACCCGCTCCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGSAICS*TRSWAW
Trigger: CCAGGCCCAGGAGCGGGTGCAGCTGCAGATGGCGGA...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGACCAGCTCCGCCATCTaGAGCTGCACCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMTSSAI*SCTRSW
Trigger: CCAGGAGCGGGTGCAGCTGCAGATGGCGGAGCTGGT...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTACCAGCTCCGCCATCTaGAGCTGCACCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRTSSAI*SCTRSW
Trigger: CCAGGAGCGGGTGCAGCTGCAGATGGCGGAGCTGGT...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGCTGAGGATGGCAGCTaGTCGGCCCGGAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGAEDGS*SARSPW
Trigger: CCAAGGGCTCCGGGCCGAGCAGCTGCCATCCTCAGC...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGCTGAGGATGGCAGCTaGTCGGCCCGGAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGAEDGS*SARSPW
Trigger: CCAAGGGCTCCGGGCCGAGCAGCTGCCATCCTCAGC...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGGATTCCTCCTCGCCCTaGTCCTGCTGCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEDSSSP*SCCEPW
Trigger: CCAGGGCTCGCAGCAGGAGCAGGGCGAGGAGGAATC...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGATTCCTCCTCGCCCTaGTCCTGCTGCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHDSSSP*SCCEPW
Trigger: CCAGGGCTCGCAGCAGGAGCAGGGCGAGGAGGAATC...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGCAGCACAGCAGCTGCTaGAGCTCTGGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EASWFRSGERRLSQGGGGQHSSC*SSGTEL
Trigger: CAGCTCTGTGCCAGAGCTGCAGCAGCTGCTGTGCTG...CCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGCAGCACAGCAGCTGCTaGAGCTCTGGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGQHSSC*SSGTEL
Trigger: CAGCTCTGTGCCAGAGCTGCAGCAGCTGCTGTGCTG...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTTCGCCTCTTGCCGCGTaGAGCACAGCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PQSEASWFRSGERRLSQGSPLAA*STAAAA
Trigger: TGCAGCAGCTGCTGTGCTGCACGCGGCAAGAGGCGA...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGCTGGGAGCTGGGCCTTaGTCTGTTCCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGLGAGP*SVPAAP
Trigger: GGGTGCAGCAGGAACAGAGCAAGGCCCAGCTCCCAG...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCGCTCTAGGCGCACCTaGAGGGCCTGGGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: VSGTVEKPSKTPERGLMVRSRRT*RAWDSR
Trigger: GCGACTGTCCCAGGCCCTGCAGGTGCGCCTAGAGCG...AACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTGGGGCAGCAACTCCGTaGAGCCGTGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HPRPQSEASWFRSGERRLGAATP*SRAGKG
Trigger: CCCCTTCCCTGCACGGCTCCACGGAGTTGCTGCCCC...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp TCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCGGGGCAGCAACTCCGTaGAGCCGTGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SQGRWKSHPRPQSEASWFGAATP*SRAGKG
Trigger: CCCCTTCCCTGCACGGCTCCACGGAGTTGCTGCCCC...GAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCCAGGAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGGGGAGAAGGAGGAGATaGAGGCGCTGTCATCGCAGT +
Preference number: 4 (lower is better)
Translates to: PRRQHSSQKAAGLSLHLWGRRRR*RRCHRS
Trigger: ACTGCGATGACAGCGCCTCCATCTCCTCCTTCTCCC...CCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGAGGCCCTGGCGGCTTTaGGGCAGGGAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGTVEKPSKTPERGLMVQRPWRL*GREELL
Trigger: CAGCAGCTCCTCCCTGCCCCAAAGCCGCCAGGGCCT...CTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGTGGTGCAGGCACTTGTaGGTGGTGACCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGWCRHL*VVTSSA
Trigger: GGCGGAGCTGGTCACCACCCACAAGTGCCTGCACCA...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCTCCTGCTGCGAGCCCTaGGGGGCTGAGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGSCCEP*GAEDGS
Trigger: GCTGCCATCCTCAGCCCCCCAGGGCTCGCAGCAGGA...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGCGCACCTGCAGGGCCTaGGACAGTCGCACGAAATCC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGRTCRA*DSRTKS
Trigger: GGATTTCGTGCGACTGTCCCAGGCCCTGCAGGTGCG...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGTCCAGGGTCTCAGCCTaGCGGATCCGCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRSRVSA*RIRSRR
Trigger: GCGCCTAGAGCGGATCCGCCAGGCTGAGACCCTGGA...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGTCCAGGGTCTCAGCCTaGCGGATCCGCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMSRVSA*RIRSRR
Trigger: GCGCCTAGAGCGGATCCGCCAGGCTGAGACCCTGGA...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGTCCAGGGTCTCAGCCTaGCGGATCCGCTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: GGKAIQDPRARPHGSGVGSRVSA*RIRSRR
Trigger: GCGCCTAGAGCGGATCCGCCAGGCTGAGACCCTGGA...CCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGTTCCCAGGGTGGGGGTaGGGATATCCTGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGFPGWG*GYPDPS
Trigger: TGAGGGGTCAGGATATCCCCACCCCCACCCTGGGAA...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCCAGGAGGCAGCACAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGCCTGGGTCGCCGCTGTaGACAAGCGTCTTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PRRQHSSQKAAGLSLHLWPGSPL*TSVLVS
Trigger: TGACACTAAGACGCTTGTCCACAGCGGCGACCCAGG...CCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTGTGCTGCCTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGGCCTCTGTGCAAGCTTaGAGGCCTGGGTCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRASVQA*RPGSPL
Trigger: CAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGC...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGCGTCTCAGGCCCTCTTaGAGCTCGTCCCGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMRLRPS*SSSRSR
Trigger: TCGCGAGCGGGACGAGCTCCAAGAGGGCCTGAGACG...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGCGTCTCTGGATCTCCTaGATCAGCTCCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGRLWIS*ISSSAL
Trigger: GAGGGCCGAGGAGCTGATTCAGGAGATCCAGAGACG...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp TGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTGGCACTTGTGGGTGGTaGCCAGCTCCGCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: CLCASLEAWVAAVDKRLSGTCGW*PAPPSA
Trigger: TGCAGATGGCGGAGCTGGTCACCACCCACAAGTGCC...ACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTGGCACTTGTGGGTGGTaGCCAGCTCCGCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRGTCGW*PAPPSA
Trigger: TGCAGATGGCGGAGCTGGTCACCACCCACAAGTGCC...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp GGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGCACAGAGCTGGGCAGTaGTTCCTCCTCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGKAIQDPRARPHGSGVGHRAGQ*FLLALL
Trigger: GAGCAGGGCGAGGAGGAATCACTGCCCAGCTCTGTG...CCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCCTTGGCCCTCTGTTCTaGGAGGAGGTCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVLGPLF*EEVWEL
Trigger: CAGCTCCCAGACCTCCTCTCAGAACAGAGGGCCAAG...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATCCCAGGTGTGATCCCTaGGAACAGGAGGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHPRCDP*EQEAQP
Trigger: TGGCTGGGCCTCCTGTTCTCAGGGATCACACCTGGG...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTCGGCCTCACCATTTaGCCCTTCCTGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRLGLTI*PFLGPG
Trigger: TCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAG...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTCAGTCCTGCTGCTGCTaGTGTCGCTCCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGQSCCC*CRSCFR
Trigger: CCTGAAGCAGGAGCGACAGCAGCAGCAGCAGGACTG...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGTGCAGGGAAGGGGCATaGCGGGGACGTCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRCREGA*RGRLWI
Trigger: GATCCAGAGACGTCCCCGGCATGCCCCTTCCCTGCA...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAAACTCCGTGGAGCCGTaGAGGGAAGGGGCATGCCGG +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSNSVEP*REGACR
Trigger: CCGGCATGCCCCTTCCCTGCACGGCTCCACGGAGTT...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGAGGGGGCAGGTAGATaGCCTCGGGAACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPEGAGR*PREPGC
Trigger: GCACCCTGGTTCCCGAGGGCATCTACCTGCCCCCTC...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGAGGGGGCAGGTAGATaGCCTCGGGAACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSEGAGR*PREPGC
Trigger: GCACCCTGGTTCCCGAGGGCATCTACCTGCCCCCTC...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAACCAGCTCCGCCATCTaGAGCTGCACCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGTSSAI*SCTRSW
Trigger: CCAGGAGCGGGTGCAGCTGCAGATGGCGGAGCTGGT...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGTCGCCTCTTGCCGCGTaGAGCACAGCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMSPLAA*STAAAA
Trigger: TGCAGCAGCTGCTGTGCTGCACGCGGCAAGAGGCGA...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTGGGAGCTGGGCCTTaGTCTGTTCCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRLGAGP*SVPAAP
Trigger: GGGTGCAGCAGGAACAGAGCAAGGCCCAGCTCCCAG...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCTGGGAGCTGGGCCTTaGTCTGTTCCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSLGAGP*SVPAAP
Trigger: GGGTGCAGCAGGAACAGAGCAAGGCCCAGCTCCCAG...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGTGGGCCAGGAGCACCTaGATCTGCTTGGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGWARST*ICLAQS
Trigger: GGACTGTGCCAAGCAGATGCAGGTGCTCCTGGCCCA...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGAGGCCACCTCCTCTTaGCACTGCCGCTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSEATSS*HCRCTA
Trigger: TGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTC...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CAGGGCGGTGATCTGGGCTTCATAGCTGCTGATGGAGTCATGTTGCCCAGGCTGGAGGCCACCTCCTCTTaGCACTGCCGCTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: QGGDLGFIAADGVMLPRLEATSS*HCRCTA
Trigger: TGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTC...CAGCCTGGGCAACATGACTCCATCAGCAGCTATGAAGCCCAGATCACCGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR CCA 90 bp GAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGGGAGAAGGAGGAGATaGAGGCGCTGTCATCGCAGT +
Preference number: 4 (lower is better)
Translates to: EASWFRSGERRLSQGGGGGRRRR*RRCHRS
Trigger: ACTGCGATGACAGCGCCTCCATCTCCTCCTTCTCCC...CCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGCGCACCTGCAGGGCCTaGGACAGTCGCACGAAATCC +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRRTCRA*DSRTKS
Trigger: GGATTTCGTGCGACTGTCCCAGGCCCTGCAGGTGCG...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTCCCAGGGTGGGGGTaGGGATATCCTGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVFPGWG*GYPDPS
Trigger: TGAGGGGTCAGGATATCCCCACCCCCACCCTGGGAA...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGCGTCTTTCCCAGGGTaGGGGTGGGGATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGASFPG*GWGYPD
Trigger: GTCAGGATATCCCCACCCCCACCCTGGGAAAGACGC...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCGCAAGCTTGGAGGCCTaGGTCGCCGCTGTGGACAAG +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSASLEA*VAAVDK
Trigger: CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGC...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGCCTCTGTGCAAGCTTaGAGGCCTGGGTCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPASVQA*RPGSPL
Trigger: CAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGC...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTGCACCTGCATCTGCTTaGCACAGTCCTCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: QQPESRRPEPAPLVPGGAAPASA*HSPHCS
Trigger: GGAGCAATGAGGACTGTGCCAAGCAGATGCAGGTGC...AGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358201.9
CDS-3UTR TCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCACCGGCTGAGCTCACCTaGCTCGGCCTCACCATTTGC +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSPAELT*LGLTIC
Trigger: GCAAATGGTGAGGCCGAGTCAGGTGAGCTCAGCCGG...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp CTGTCGCTCCTGCTTCAGGGCGGTGATCTGGGCTTCATAGCTGCTGATGGAGTCCCGGCTGAGCTCACCTaGCTCGGCCTCACCATTTGC +
Preference number: 4 (lower is better)
Translates to: LSLLLQGGDLGFIAADGVPAELT*LGLTIC
Trigger: GCAAATGGTGAGGCCGAGTCAGGTGAGCTCAGCCGG...GACTCCATCAGCAGCTATGAAGCCCAGATCACCGCCCTGAAGCAGGAGCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR TCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGCTGTCATCGCAGTTGTaGGCGAAGGCCTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRLSSQL*AKASAA
Trigger: AGCCGCTGAGGCCTTCGCTCACAACTGCGATGACAG...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCATGCAGCTGCTCCCACTaGGTGTCTGGGACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPCSCSH*VSGTSW
Trigger: CCAGCTCGTCCCAGACACTCAGTGGGAGCAGCTGCA...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCTTGGCCCTCTGTTCTaGGAGGAGGTCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSLGPLF*EEVWEL
Trigger: CAGCTCCCAGACCTCCTCTCAGAACAGAGGGCCAAG...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTGTGGCGCCTCATCCATaGTGCTGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSKTPERGLMVQEWGKASVAPHP*CCALAP
Trigger: TGGAGCAAGTGCGCAGCATCATGGATGAGGCGCCAC...AGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTGTGGCGCCTCATCCATaGTGCTGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRVAPHP*CCALAP
Trigger: TGGAGCAAGTGCGCAGCATCATGGATGAGGCGCCAC...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGACCCAGGTGTGATCCCTaGGAACAGGAGGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGPRCDP*EQEAQP
Trigger: TGGCTGGGCCTCCTGTTCTCAGGGATCACACCTGGG...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCACCCCTCACCCAGGTGTaGTCCCTGAGAACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSPLTQV*SLRTGG
Trigger: GCCTCCTGTTCTCAGGGATCACACCTGGGTGAGGGG...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp GTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCCCCTCACCCAGGTGTaGTCCCTGAGAACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VSGTVEKPSKTPERGLMVPLTQV*SLRTGG
Trigger: GCCTCCTGTTCTCAGGGATCACACCTGGGTGAGGGG...AACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGACAGCCTCGGCCTTCGTaGTCTCGCTCACCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGQPRPS*SRSPLP
Trigger: TGGCAGAGGTGAGCGAGAGCACGAAGGCCGAGGCTG...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTCTTTCAGGATGGCCTaGAGCGAGGCCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVSFRMA*SEATSS
Trigger: AGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGA...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTTGCAGGGAAGGGGCATaGCGGGGACGTCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: VSGTVEKPSKTPERGLMVCREGA*RGRLWI
Trigger: GATCCAGAGACGTCCCCGGCATGCCCCTTCCCTGCA...AACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGGTGCAGCACAGCAGCTaGTGCAGCTCTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: GGKAIQDPRARPHGSGVGVQHSS*CSSGTE
Trigger: CTCTGTGCCAGAGCTGCAGCAGCTGCTGTGCTGCAC...CCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTGTGCAGCACAGCAGCTaGTGCAGCTCTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRVQHSS*CSSGTE
Trigger: CTCTGTGCCAGAGCTGCAGCAGCTGCTGTGCTGCAC...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGATCGCCTCTTGCCGCGTaGAGCACAGCAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGSPLAA*STAAAA
Trigger: TGCAGCAGCTGCTGTGCTGCACGCGGCAAGAGGCGA...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGCGCACGAAATCCCTCTaGACCTGCTCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QSEASWFRSGERRLSQGGRTKSL*TCSLVS
Trigger: GGAGACCAGTGAGCAGGTGCAGAGGGATTTCGTGCG...CCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTATGATGCTGCGCACTTaGTCCAGGGTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SEASWFRSGERRLSQGGGMMLRT*SRVSAW
Trigger: CCAGGCTGAGACCCTGGAGCAAGTGCGCAGCATCAT...ACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATCTCTCCAGGTCCTTCTaGAGCTGTCGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHLSRSF*SCRPSV
Trigger: GACAGAGGGCCGACAGCTGCAGAAGGACCTGGAGAG...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTGTCATGCAGACCTCTCTGTCCTCAGGCTaGACAGGGAGGCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLEAWVAAVDKRLSVMQTSLSSG*TGRPPA
Trigger: TGCTGGAGGCCTCCCTGTGCAGCCTGAGGACAGAGA...GGTCTGCATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358201.9
CDS-3UTR CCA 90 bp CAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTCTGCCACAGCCTTCATaGTTTCCATTTCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QQPESRRPEPAPLVPGGALPQPS*FPFLPG
Trigger: CCCTGGCAGAAATGGAAACCATGAAGGCTGTGGCAG...AGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTTTCTCCGAGTCCTCGTaGGCCTTTTCCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QQPESRRPEPAPLVPGGAFSESS*AFSICF
Trigger: GAAGCAGATGGAAAAGGCCCACGAGGACTCGGAGAA...AGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTTCTGAGTTCTGGACCTaGGCCAGGAGCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: PQSEASWFRSGERRLSQGSEFWT*ARSTCI
Trigger: GATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGA...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTTGGTGCAGGCACTTGTaGGTGGTGACCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GRWKSHPRPQSEASWFRSWCRHL*VVTSSA
Trigger: GGCGGAGCTGGTCACCACCCACAAGTGCCTGCACCA...ACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCGCTCTGGCACAGAGCTaGGCAGTGATTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSALAQS*AVIPPR
Trigger: GCGAGGAGGAATCACTGCCCAGCTCTGTGCCAGAGC...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTGCTCTGGCACAGAGCTaGGCAGTGATTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRALAQS*AVIPPR
Trigger: GCGAGGAGGAATCACTGCCCAGCTCTGTGCCAGAGC...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTGCAGCCGCAGCACCTTaGCCCTCTGTTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRAAAAP*PSVLRG
Trigger: TCCTCTCAGAACAGAGGGCCAAGGTGCTGCGGCTGC...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGCCTGACGTCCGTGAGTaGCGCCTCATCCATGATGCT +
Preference number: 4 (lower is better)
Translates to: PERGLMVQEWGKASFPGWPDVRE*RLIHDA
Trigger: AGCATCATGGATGAGGCGCCACTCACGGACGTCAGG...CCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTCCTGACGTCCGTGAGTaGCGCCTCATCCATGATGCT +
Preference number: 4 (lower is better)
Translates to: PQSEASWFRSGERRLSQGPDVRE*RLIHDA
Trigger: AGCATCATGGATGAGGCGCCACTCACGGACGTCAGG...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTTCCCAGGGTGGGGGTaGGGATATCCTGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEFPGWG*GYPDPS
Trigger: TGAGGGGTCAGGATATCCCCACCCCCACCCTGGGAA...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp TGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTGCGTCTTTCCCAGGGTaGGGGTGGGGATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: CLCASLEAWVAAVDKRLSASFPG*GWGYPD
Trigger: GTCAGGATATCCCCACCCCCACCCTGGGAAAGACGC...ACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGCAAGCTTGGAGGCCTaGGTCGCCGCTGTGGACAAG +
Preference number: 4 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVASLEA*VAAVDK
Trigger: CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGC...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTCCTGCTTCAGGGCGGTaGTCTGGGCTTCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPRPQSEASWFRSGERRLPASGR*SGLHSC
Trigger: GCAGCTATGAAGCCCAGATCACCGCCCTGAAGCAGG...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGACCTGCTTCAGGGCGGTaGTCTGGGCTTCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGPASGR*SGLHSC
Trigger: GCAGCTATGAAGCCCAGATCACCGCCCTGAAGCAGG...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp GGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTCGTCTCTGGATCTCCTaGATCAGCTCCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GRWKSHPRPQSEASWFRSRLWIS*ISSSAL
Trigger: GAGGGCCGAGGAGCTGATTCAGGAGATCCAGAGACG...ACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGACGTCTCTGGATCTCCTaGATCAGCTCCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGRLWIS*ISSSAL
Trigger: GAGGGCCGAGGAGCTGATTCAGGAGATCCAGAGACG...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCACTGTCATCGCAGTTGTaGGCGAAGGCCTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSLSSQL*AKASAA
Trigger: AGCCGCTGAGGCCTTCGCTCACAACTGCGATGACAG...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGCTGTCATCGCAGTTGTaGGCGAAGGCCTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVLSSQL*AKASAA
Trigger: AGCCGCTGAGGCCTTCGCTCACAACTGCGATGACAG...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTAGAAAGCCGCAGGCCTaGGCCTGCACCTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HPRPQSEASWFRSGERRLRKPQA*ACTFGS
Trigger: GGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCT...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAAGAAAGCCGCAGGCCTaGGCCTGCACCTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSRKPQA*ACTFGS
Trigger: GGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCT...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGTCTTTCAGGATGGCCTaGAGCGAGGCCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMSFRMA*SEATSS
Trigger: AGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGA...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCACAGTCCTGCTGCTGCTaGTGTCGCTCCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPQSCCC*CRSCFR
Trigger: CCTGAAGCAGGAGCGACAGCAGCAGCAGCAGGACTG...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGTCCTGCTGCTGCTaGTGTCGCTCCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VSGTVEKPSKTPERGLMVQSCCC*CRSCFR
Trigger: CCTGAAGCAGGAGCGACAGCAGCAGCAGCAGGACTG...AACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTTCCTCACAGTCCTGCTaGTGCTGCTGTCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VSGTVEKPSKTPERGLMVSSQSC*CCCRSC
Trigger: GCAGGAGCGACAGCAGCAGCAGCAGGACTGTGAGGA...AACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGATCCTCACAGTCCTGCTaGTGCTGCTGTCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGSSQSC*CCCRSC
Trigger: GCAGGAGCGACAGCAGCAGCAGCAGGACTGTGAGGA...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTTCCTCACAGTCCTGCTaGTGCTGCTGTCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRWKSHPRPQSEASWFRSSSQSC*CCCRSC
Trigger: GCAGGAGCGACAGCAGCAGCAGCAGGACTGTGAGGA...ACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATTTCTCCTCACAGTCCTaGTGCTGCTGCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHFSSQS*CCCCRS
Trigger: GGAGCGACAGCAGCAGCAGCAGGACTGTGAGGAGAA...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTTCTCCTCACAGTCCTaGTGCTGCTGCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEFSSQS*CCCCRS
Trigger: GGAGCGACAGCAGCAGCAGCAGGACTGTGAGGAGAA...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGTTCTCCTCACAGTCCTaGTGCTGCTGCTGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMFSSQS*CCCCRS
Trigger: GGAGCGACAGCAGCAGCAGCAGGACTGTGAGGAGAA...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAAGGGTCCGCAGCAGCTaGTCTGAGTTCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGRVRSS*SEFWTW
Trigger: CCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCT...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTAGGGTCCGCAGCAGCTaGTCTGAGTTCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: HPRPQSEASWFRSGERRLRVRSS*SEFWTW
Trigger: CCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCT...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAAGGGTCCGCAGCAGCTaGTCTGAGTTCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPRVRSS*SEFWTW
Trigger: CCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCT...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGCGCTTTACCTCATGGTaGAGGCACTTGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PERGLMVQEWGKASFPGWRFTSW*RHLWVV
Trigger: CACCACCCACAAGTGCCTGCACCATGAGGTAAAGCG...CCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCCAGCACAGCAGCTGCTaGAGCTCTGGCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGQHSSC*SSGTEL
Trigger: CAGCTCTGTGCCAGAGCTGCAGCAGCTGCTGTGCTG...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGTGCAGCACAGCAGCTaGTGCAGCTCTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSVQHSS*CSSGTE
Trigger: CTCTGTGCCAGAGCTGCAGCAGCTGCTGTGCTGCAC...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGTTGCTCTGTTCCTGCTaGACCCGCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PERGLMVQEWGKASFPGWLLCSC*TRSISV
Trigger: GACAGAGATGGAGCGGGTGCAGCAGGAACAGAGCAA...CCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTCTCTCCAGGTCCTTCTaGAGCTGTCGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HPRPQSEASWFRSGERRLLSRSF*SCRPSV
Trigger: GACAGAGGGCCGACAGCTGCAGAAGGACCTGGAGAG...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp TCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGTCTCTGTCCTCAGGCTaGACAGGGAGGCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGTVEKPSKTPERGLMVQSLSSG*TGRPPA
Trigger: TGCTGGAGGCCTCCCTGTGCAGCCTGAGGACAGAGA...CTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGAGTCTTTCAGGATaGCCTGCAGCGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEWSLSG*PAARPP
Trigger: AGGTGGCCTCGCTGCAGGCCATCCTGAAAGACTCCA...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGCTCCCACTGAGTGTCTaGGACGAGCTGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVLPLSV*DELVAR
Trigger: CCTGGCTACCAGCTCGTCCCAGACACTCAGTGGGAG...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCCTCCCACTGAGTGTCTaGGACGAGCTGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGLPLSV*DELVAR
Trigger: CCTGGCTACCAGCTCGTCCCAGACACTCAGTGGGAG...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTCGGCCCGGAGCCCTTaGTTTTCCTCATTCAACCGC +
Preference number: 4 (lower is better)
Translates to: PSKTPERGLMVQEWGKASSARSP*FSSFNR
Trigger: GCGGTTGAATGAGGAAAACCAAGGGCTCCGGGCCGA...AGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGCAGCCGCAGCACCTTaGCCCTCTGTTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRWKSHPRPQSEASWFRSAAAAP*PSVLRG
Trigger: TCCTCTCAGAACAGAGGGCCAAGGTGCTGCGGCTGC...ACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGCGTCTTTCCCAGGGTaGGGGTGGGGATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVASFPG*GWGYPD
Trigger: GTCAGGATATCCCCACCCCCACCCTGGGAAAGACGC...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGCTCATGGTTCAGGAGTaGGGAAAGGCGTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGLMVQE*GKASFP
Trigger: TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAG...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGAGCGAGGCCTCATaGTTCAGGAGTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSQSEAS*FRSGER
Trigger: CCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGCAGAGCGAGGCCTCATaGTTCAGGAGTGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRQSEAS*FRSGER
Trigger: CCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTG...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
3UTR CAA 72 bp AACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTaGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: NDGKVWPCLCAS*EAWVAAVDKRL
Trigger: AAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGCATGGTTTCCATTTCTaGCAGGGCGCCTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVHGFHF*QGACQL
Trigger: GAGCTGGCAGGCGCCCTGGCAGAAATGGAAACCATG...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp TGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTTGGGCCTTTTCCATCTaGTTCTCCAGGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLCASLEAWVAAVDKRLSWAFSI*FSRESR
Trigger: CCTGGACTCCCTGGAGAAGCAGATGGAAAAGGCCCA...ACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTTGGGCCTTTTCCATCTaGTTCTCCAGGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRWAFSI*FSRESR
Trigger: CCTGGACTCCCTGGAGAAGCAGATGGAAAAGGCCCA...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCGCTTTACCTCATGGTaGAGGCACTTGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SHPRPQSEASWFRSGERRRFTSW*RHLWVV
Trigger: CACCACCCACAAGTGCCTGCACCATGAGGTAAAGCG...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp CCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTGCTCTGTTCCTGCTaGACCCGCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PSKTPERGLMVQEWGKASLLCSC*TRSISV
Trigger: GACAGAGATGGAGCGGGTGCAGCAGGAACAGAGCAA...AGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGACGCACGAAATCCCTCTaGACCTGCTCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGRTKSL*TCSLVS
Trigger: GGAGACCAGTGAGCAGGTGCAGAGGGATTTCGTGCG...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTTTCTCCGAGTCCTCGTaGGCCTTTTCCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQSEASWFRSGERRLSQGFSESS*AFSICF
Trigger: GAAGCAGATGGAAAAGGCCCACGAGGACTCGGAGAA...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGGGAGAAGGAGGAGATaGAGGCGCTGTCATCGCAGT +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGGRRRR*RRCHRS
Trigger: ACTGCGATGACAGCGCCTCCATCTCCTCCTTCTCCC...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGATCTGAGTTCTGGACCTaGGCCAGGAGCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGSEFWT*ARSTCI
Trigger: GATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGA...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGATCGGCCCGGAGCCCTTaGTTTTCCTCATTCAACCGC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGSARSP*FSSFNR
Trigger: GCGGTTGAATGAGGAAAACCAAGGGCTCCGGGCCGA...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCACCTGACGTCCGTGAGTaGCGCCTCATCCATGATGCT +
Preference number: 4 (lower is better)
Translates to: LRDGGKAIQDPRARPHGSPDVRE*RLIHDA
Trigger: AGCATCATGGATGAGGCGCCACTCACGGACGTCAGG...TGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGCAGTCTCAGGGACGGTaGAAAAGCCATCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: GGKAIQDPRARPHGSGVGQSQGR*KSHPRP
Trigger: GGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTG...CCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGCAGTCTCAGGGACGGTaGAAAAGCCATCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEQSQGR*KSHPRP
Trigger: GGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTG...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCGCACCTGCATCTGCTTaGCACAGTCCTCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRPQSEASWFRSGERRLSAPASA*HSPHCS
Trigger: GGAGCAATGAGGACTGTGCCAAGCAGATGCAGGTGC...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp GGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTCGCTTTACCTCATGGTaGAGGCACTTGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRWKSHPRPQSEASWFRSRFTSW*RHLWVV
Trigger: CACCACCCACAAGTGCCTGCACCATGAGGTAAAGCG...ACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR GCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGATTGCTCTGTTCCTGCTaGACCCGCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGLLCSC*TRSISV
Trigger: GACAGAGATGGAGCGGGTGCAGCAGGAACAGAGCAA...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGCTGCCACAGCCTTCATaGTTTCCATTTCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTVEKPSKTPERGLMVQELPQPS*FPFLPG
Trigger: CCCTGGCAGAAATGGAAACCATGAAGGCTGTGGCAG...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAACCGCTTTACCTCATaGTGCAGGCACTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRNRFTS*CRHLWV
Trigger: CACCCACAAGTGCCTGCACCATGAGGTAAAGCGGTT...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGAACCGCTTTACCTCATaGTGCAGGCACTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMNRFTS*CRHLWV
Trigger: CACCCACAAGTGCCTGCACCATGAGGTAAAGCGGTT...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATCTCATGGTTCAGGAGTaGGGAAAGGCGTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHLMVQE*GKASFP
Trigger: TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAG...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR TCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGGGCTTCATAGCTGCTaGTGGAGTCTTTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGGLHSC*WSLSGW
Trigger: CCATCCTGAAAGACTCCATCAGCAGCTATGAAGCCC...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCTTCTCCGAGTCCTCGTaGGCCTTTTCCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGFSESS*AFSICF
Trigger: GAAGCAGATGGAAAAGGCCCACGAGGACTCGGAGAA...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp TCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGAACCGCTTTACCTCATaGTGCAGGCACTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SGTVEKPSKTPERGLMVQNRFTS*CRHLWV
Trigger: CACCCACAAGTGCCTGCACCATGAGGTAAAGCGGTT...CTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCACTCATGGTTCAGGAGTaGGGAAAGGCGTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KTPERGLMVQEWGKASFPLMVQE*GKASFP
Trigger: TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAG...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CCA 90 bp AGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAAACGACGGAAAAGTCTaGCCTTGCCTCTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RDGGKAIQDPRARPHGSGNDGKV*PCLCAS
Trigger: GCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTT...TCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp GTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTAACGACGGAAAAGTCTaGCCTTGCCTCTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VSGTVEKPSKTPERGLMVNDGKV*PCLCAS
Trigger: GCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTT...AACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCCGGGCCCTCGCCTCTTaGCGCGTGCAGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCLFIENKRRKSLALPLCRALAS*RVQHSS
Trigger: GCTGCTGTGCTGCACGCGGCAAGAGGCGAGGGCCCG...GCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGCAGCCCGAAGCCGGCTaGGCTCACCTGACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: YLLKINDGKVWPCLCASLQPEAG*AHLTRP
Trigger: AGGCCGAGTCAGGTGAGCTCAGCCGGCTTCGGGCTG...CAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCAGCCCGAAGCCGGCTaGGCTCACCTGACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLQPEAG*AHLTRP
Trigger: AGGCCGAGTCAGGTGAGCTCAGCCGGCTTCGGGCTG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGCTGCCCCTCCAGGCTaGCCCTGGCCACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLAAPPG*PWPLSP
Trigger: AGGAGACAGTGGCCAGGGCCAGCCTGGAGGGGCAGC...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGCGTCTCAGGCCCTCTTaGAGCTCGTCCCGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: YLLKINDGKVWPCLCASLRLRPS*SSSRSR
Trigger: TCGCGAGCGGGACGAGCTCCAAGAGGGCCTGAGACG...CAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358201.9
CDS-3UTR GCA 90 bp TGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGTGCAGGGAAGGGGCATaGCGGGGACGTCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: CLFIENKRRKSLALPLCKCREGA*RGRLWI
Trigger: GATCCAGAGACGTCCCCGGCATGCCCCTTCCCTGCA...CTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTGAGCCTGCACCTTTaGTTCCGGGAGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CLFIENKRRKSLALPLCKLSLHL*FREGLG
Trigger: CCCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAG...CTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCTCGGCCTCACCATTTaGCCCTTCCTGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLLGLTI*PFLGPG
Trigger: TCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp AGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCATGATGCTGCGCACTTaGTCCAGGGTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SCLFIENKRRKSLALPLCMMLRT*SRVSAW
Trigger: CCAGGCTGAGACCCTGGAGCAAGTGCGCAGCATCAT...GCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGTGGGCCAGGAGCACCTaGATCTGCTTGGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: YLLKINDGKVWPCLCASLWARST*ICLAQS
Trigger: GGACTGTGCCAAGCAGATGCAGGTGCTCCTGGCCCA...CAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358201.9
CDS-3UTR CCA 90 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGCCATTTGCCCCTTCCTaGGACCGGGAGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: YLLKINDGKVWPCLCASLPFAPS*DRESSS
Trigger: ACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGG...CAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCTTGGCCCTCTGTTCTaGGAGGAGGTCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLLGPLF*EEVWEL
Trigger: CAGCTCCCAGACCTCCTCTCAGAACAGAGGGCCAAG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGTGGCGCCTCATCCATaGTGCTGCGCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLVAPHP*CCALAP
Trigger: TGGAGCAAGTGCGCAGCATCATGGATGAGGCGCCAC...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGTGGAGTCTTTCAGGATaGCCTGCAGCGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: YLLKINDGKVWPCLCASLWSLSG*PAARPP
Trigger: AGGTGGCCTCGCTGCAGGCCATCCTGAAAGACTCCA...CAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCTCCCACTGAGTGTCTaGGACGAGCTGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLLPLSV*DELVAR
Trigger: CCTGGCTACCAGCTCGTCCCAGACACTCAGTGGGAG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGCTCTGGCACAGAGCTaGGCAGTGATTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLALAQS*AVIPPR
Trigger: GCGAGGAGGAATCACTGCCCAGCTCTGTGCCAGAGC...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCGCACGAAATCCCTCTaGACCTGCTCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLRTKSL*TCSLVS
Trigger: GGAGACCAGTGAGCAGGTGCAGAGGGATTTCGTGCG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR TCA 90 bp TGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGGGGCTTCATAGCTGCTaGTGGAGTCTTTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: CLFIENKRRKSLALPLCKGLHSC*WSLSGW
Trigger: CCATCCTGAAAGACTCCATCAGCAGCTATGAAGCCC...CTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR GCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTTGGGCCTTTTCCATCTaGTTCTCCAGGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLWAFSI*FSRESR
Trigger: CCTGGACTCCCTGGAGAAGCAGATGGAAAAGGCCCA...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CCA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCAGTCTCAGGGACGGTaGAAAAGCCATCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: LFIENKRRKSLALPLCKLQSQGR*KSHPRP
Trigger: GGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS GCA 90 bp GGACACCGGCCTGCGGAGAGCTCCCCCTCGCTCCCTCGCTGCCCCTaGCCGGAGCCAGCCTTTGATCGGCTCCGGCCGCCCTTCCGCCCG +
Preference number: 5 (lower is better)
Translates to: GHRPAESSPSLPRCP*PEPAFDRLRPPFRP
Trigger: CGGGCGGAAGGGCGGCCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAGGGGGAGCTCTCCGCAGGCCGGTGTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 90 bp CCTCCGGGACACCGGCCTGCGGAGAGCTCCCCCTCGCTCCCTCGCTaGCCCTGCCCGGAGCCAGCCTTTGATCGGCTCCGGCCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: PPGHRPAESSPSLPR*PCPEPAFDRLRPPF
Trigger: GAAGGGCGGCCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAGGGGGAGCTCTCCGCAGGCCGGTGTCCCGGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CCA 90 bp CGCAGCGTCACGATCTCGATCCGCAGGCGCTCGGCCCCGTGCTCCTaGGCCTGCAGCCGGGCCCTCGCCTCTTGCCGCGTGCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: RSVTISIRRRSAPCS*ACSRALASCRVQHS
Trigger: GCTGTGCTGCACGCGGCAAGAGGCGAGGGCCCGGCTGCAGGCCCAGGAGCACGGGGCCGAGCGCCTGCGGATCGAGATCGTGACGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS TCA 90 bp GAGCTCCCCCTCGCTCCCTCGCTGCCCCTGCCCGGAGCCAGCCTTTaGTCGGCTCCGGCCGCCCTTCCGCCCGAGCCTGGCTTGCGTTAC +
Preference number: 5 (lower is better)
Translates to: ELPLAPSLPLPGASL*SAPAALPPEPGLRY
Trigger: GTAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAGGGGGAGCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 90 bp GTCACGATCTCGATCCGCAGGCGCTCGGCCCCGTGCTCCTGGGCCTaGAGCCGGGCCCTCGCCTCTTGCCGCGTGCAGCACAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VTISIRRRSAPCSWA*SRALASCRVQHSSC
Trigger: GCAGCTGCTGTGCTGCACGCGGCAAGAGGCGAGGGCCCGGCTGCAGGCCCAGGAGCACGGGGCCGAGCGCCTGCGGATCGAGATCGTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS CCA 90 bp CCGGCCGCCCTTCCGCCCGAGCCTGGCTTGCGTTACCGCGAATTGTaGCGGGGCCCTCCCTGCACCTCCGCCCTCTTGGAGCGTCCCTCG +
Preference number: 5 (lower is better)
Translates to: PAALPPEPGLRYREL*RGPPCTSALLERPS
Trigger: CGAGGGACGCTCCAAGAGGGCGGAGGTGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 90 bp CCGCCGCTCATCGTCGTCCGCGGCCACCGGCGCAGCTGCCGCCATTaGCTCAGCGCAAACGGCGGATTCCCGCACTCCCTGGTGACGGAG +
Preference number: 5 (lower is better)
Translates to: PPLIVVRGHRRSCRH*LSANGGFPHSLVTE
Trigger: CTCCGTCACCAGGGAGTGCGGGAATCCGCCGTTTGCGCTGAGGCAATGGCGGCAGCTGCGCCGGTGGCCGCGGACGACGATGAGCGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562590.5
ENST00000570030.1
CDS GCA 90 bp CCAGCCTTTGATCGGCTCCGGCCGCCCTTCCGCCCGAGCCTGGCTTaGGTTACCGCGAATTGTGGCGGGGCCCTCCCTGCACCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: PAFDRLRPPFRPSLA*VTANCGGALPAPPP
Trigger: GGGCGGAGGTGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATCAAAGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS-3UTR CAA 90 bp CTGCCTCTGATGGGGACTCCCAGCCCCCATGGCTCCGCTGTGCCCTGGGCAGGGCGAGGCCACCTCCTCTaGGCACTGCCGCTGCACCGC +
Preference number: 5 (lower is better)
Translates to: LPLMGTPSPHGSAVPWAGRGHLL*ALPLHR
Trigger: GCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCG...CCCTGCCCAGGGCACAGCGGAGCCATGGGGGCTGGGAGTCCCCATCAGAGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS CCA 90 bp CGGAGCCAGCCTTTGATCGGCTCCGGCCGCCCTTCCGCCCGAGCCTaGCTTGCGTTACCGCGAATTGTGGCGGGGCCCTCCCTGCACCTC +
Preference number: 5 (lower is better)
Translates to: RSQPLIGSGRPSARA*LALPRIVAGPSLHL
Trigger: GAGGTGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATCAAAGGCTGGCTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS-3UTR CAA 90 bp CTGCTTCTCCAGGGAGTCCAGGGGGTAGGCCCGGGACAGCAGCTGCTTCAGGCGCGAGGCCACCTCCTCTaGGCACTGCCGCTGCACCGC +
Preference number: 5 (lower is better)
Translates to: LLLQGVQGVGPGQQLLQARGHLL*ALPLHR
Trigger: GCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCG...CGCCTGAAGCAGCTGCTGTCCCGGGCCTACCCCCTGGACTCCCTGGAGAAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS TCA 90 bp GCCGCCATTGCCTCAGCGCAAACGGCGGATTCCCGCACTCCCTGGTaGCGGAGCGCACCGCTTCCGGGTCCTCTCGGCTGTTTCCGGATC +
Preference number: 5 (lower is better)
Translates to: AAIASAQTADSRTPW*RSAPLPGPLGCFRI
Trigger: GATCCGGAAACAGCCGAGAGGACCCGGAAGCGGTGCGCTCCGTCACCAGGGAGTGCGGGAATCCGCCGTTTGCGCTGAGGCAATGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 90 bp CTTGCCCGGCGTCTCTCCGTGACCTTGGAAGCCCTGCTCCAATTATaGCTCCTCCGGGACACCGGCCTGCGGAGAGCTCCCCCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: LARRLSVTLEALLQL*LLRDTGLRRAPPRS
Trigger: GGAGCGAGGGGGAGCTCTCCGCAGGCCGGTGTCCCGGAGGAGGCATAATTGGAGCAGGGCTTCCAAGGTCACGGAGAGACGCCGGGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CCA 90 bp GATGGAGGCGCTGTCATCGCAGTTGTGAGCGAAGGCCTCAGCGGCTaGACCCCCATCTCCGCTCAGCTCCTCCAGAGGCTCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: DGGAVIAVVSEGLSG*TPISAQLLQRLQRG
Trigger: CCCCCGCTGGAGCCTCTGGAGGAGCTGAGCGGAGATGGGGGTCCAGCCGCTGAGGCCTTCGCTCACAACTGCGATGACAGCGCCTCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
ENST00000567483.5
ENST00000568703.5
CDS CCA 90 bp GTGGTGACCAGCTCCGCCATCTGCAGCTGCACCCGCTCCTGGGCCTaGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTGCTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: VVTSSAICSCTRSWA*LTVPCRVRSSCSEF
Trigger: GAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCGGGTGCAGCTGCAGATGGCGGAGCTGGTCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS CCA 90 bp TTGTGGGTGGTGACCAGCTCCGCCATCTGCAGCTGCACCCGCTCCTaGGCCTGGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LWVVTSSAICSCTRS*AWLTVPCRVRSSCS
Trigger: AGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCGGGTGCAGCTGCAGATGGCGGAGCTGGTCACCACCCACAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS CCA 90 bp GAGCTGGGCTCTTTCAGGATGGCCTGCAGCGAGGCCACCTCCTCTTaGCACTGCCGCTGCACCGCAGCCACAGCCTCGGCCTTCGTGCTC +
Preference number: 5 (lower is better)
Translates to: ELGSFRMACSEATSS*HCRCTAATASAFVL
Trigger: GAGCACGAAGGCCGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGAGCCCAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS CCA 90 bp GGCCCCCAGGTACTCACCATCTGCAGCTGCACCCGCTCCTGGGCCTaGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTGCTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: GPQVLTICSCTRSWA*LTVPCRVRSSCSEF
Trigger: GAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCGGGTGCAGCTGCAGATGGTGAGTACCTGGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 90 bp CGCTCCTGGGCCTGGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTaGTCTGAGTTCTGGACCTGGGCCAGGAGCACCTGCATCTCTGTC +
Preference number: 5 (lower is better)
Translates to: RSWAWLTVPCRVRSS*SEFWTWARSTCISV
Trigger: GACAGAGATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357573.10
CDS GCA 90 bp CGCTCCTGGGCCTGGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTaGTCTGAGTTCTGGACCTGGGCCAGGAGCACCTGCATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RSWAWLTVPCRVRSS*SEFWTWARSTCICL
Trigger: CAAGCAGATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGCCCAGGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS CCA 90 bp CTGCAGCTGTCGGCCCTCTGTCTGCAGCTGCTCCCACTGAGTGTCTaGGACGAGCTGGTAGCCAGGAGGGGGCAGGTAGATGCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LQLSALCLQLLPLSV*DELVARRGQVDALG
Trigger: CCCGAGGGCATCTACCTGCCCCCTCCTGGCTACCAGCTCGTCCCAGACACTCAGTGGGAGCAGCTGCAGACAGAGGGCCGACAGCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS TCA 90 bp CTGGGCCTGGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTGCTCTaGGTTCTGGACCTGGGCCAGGAGCACCTGCATCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LGLAHGPLQGPQQLL*VLDLGQEHLHLCLQ
Trigger: CTGCAGACAGAGATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357573.10
CDS TCA 90 bp CTGGGCCTGGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTGCTCTaGGTTCTGGACCTGGGCCAGGAGCACCTGCATCTGCTTGGCACA +
Preference number: 5 (lower is better)
Translates to: LGLAHGPLQGPQQLL*VLDLGQEHLHLLGT
Trigger: TGTGCCAAGCAGATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS CCA 90 bp CTGATGGAGTCTTTCAGGATGGCCTGCAGCGAGGCCACCTCCTCTTaGCACTGCCGCTGCACCGCAGCCACAGCCTCGGCCTTCGTGCTC +
Preference number: 5 (lower is better)
Translates to: LMESFRMACSEATSS*HCRCTAATASAFVL
Trigger: GAGCACGAAGGCCGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGACTCCATCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS CCA 90 bp AGCCGGCTGAGCTCACCTGACTCGGCCTCACCATTTGCCCCTTCCTaGGACCGGGAGTCCTCCAGTGCTGTGGGGGACAGGGATCAGCCT +
Preference number: 5 (lower is better)
Translates to: SRLSSPDSASPFAPS*DRESSSAVGDRDQP
Trigger: AGGCTGATCCCTGTCCCCCACAGCACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAGTCAGGTGAGCTCAGCCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562475.5
ENST00000563577.1
ENST00000564579.1
ENST00000568703.5
CDS-3UTR CAA 90 bp CCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGCGCAGCTGCCGCCATaGCCTCAGCGCAAACGGCGG +
Preference number: 5 (lower is better)
Translates to: PVSGTVEKPSKTPERGLMAQLPP*PQRKRR
Trigger: CCGCCGTTTGCGCTGAGGCAATGGCGGCAGCTGCGC...CATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp GTCTGGCCTTGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGTGCCTCTGTGCAAGCTaGGAGGCCTGGGTCGCCGCT +
Preference number: 5 (lower is better)
Translates to: VWPCLCASLEAWVAAVDKCLCAS*EAWVAA
Trigger: AGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCA...CTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCAAGGCCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS TCA 90 bp TTTCCATTTCTGCCAGGGCGCCTGCCAGCTCAGCCCGAAGCCGGCTaGGCTCACCTGACTCGGCCTCACCATTTGCCCCTTCCTGGGACC +
Preference number: 5 (lower is better)
Translates to: FPFLPGRLPAQPEAG*AHLTRPHHLPLPGT
Trigger: GGTCCCAGGAAGGGGCAAATGGTGAGGCCGAGTCAGGTGAGCTCAGCCGGCTTCGGGCTGAGCTGGCAGGCGCCCTGGCAGAAATGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000563577.1
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS GCA 90 bp CTGCACCGCAGCCACAGCCTCGGCCTTCGTGCTCTCGCTCACCTCTaGCACAGCCTTCATGGTTTCCATTTCTGCCAGGGCGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LHRSHSLGLRALAHL*HSLHGFHFCQGACQ
Trigger: CTGGCAGGCGCCCTGGCAGAAATGGAAACCATGAAGGCTGTGGCAGAGGTGAGCGAGAGCACGAAGGCCGAGGCTGTGGCTGCGGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000563577.1
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS GCA 90 bp AGCTCTGTGTGGCTGCAGGGGCCCTGTTCTGGCCACGGCACCAGCTaGCCCAAAACCCTCTTACCTACCTGGCACCGGTTCCAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SSVWLQGPCSGHGTS*PKTLLPTWHRFQGV
Trigger: CACACCCTGGAACCGGTGCCAGGTAGGTAAGAGGGTTTTGGGGCAGCTGGTGCCGTGGCCAGAACAGGGCCCCTGCAGCCACACAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CCA 90 bp CAGGAGCACCTGCATCTCTGTCTGCAGCTGCTCCCACTGAGTGTCTaGGACGAGCTGGTAGCCAGGAGGGGGCAGGTAGATGCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: QEHLHLCLQLLPLSV*DELVARRGQVDALG
Trigger: CCCGAGGGCATCTACCTGCCCCCTCCTGGCTACCAGCTCGTCCCAGACACTCAGTGGGAGCAGCTGCAGACAGAGATGCAGGTGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357573.10
CDS-3UTR CAA 90 bp TGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTCTGGCTCACGGTCCCTaGCAGGGTCCGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CLCASLEAWVAAVDKRLSLAHGP*QGPQQL
Trigger: CAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAG...ACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp CCCAGTCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATCTGGCTCACGGTCCCTaGCAGGGTCCGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PSLRDGGKAIQDPRARPHLAHGP*QGPQQL
Trigger: CAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAG...ATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp GAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGTCTGGGAGCTGGGCCTaGCTCTGTTCCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: EASWFRSGERRLSQGGGGSGSWA*LCSCCT
Trigger: GGTGCAGCAGGAACAGAGCAAGGCCCAGCTCCCAGA...CCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGTTCCGGGAGGGGCTaGGGCCCCTCACCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVGSGRG*GPSPRC
Trigger: ACACCTGGGTGAGGGGCCCAAGCCCCTCCCGGAACC...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS GCA 90 bp CTCGGCCTCACCATTTGCCCCTTCCTGGGACCGGGAGTCCTCCAGTaGTGTGGGGGACAGGGATCAGCCTCTCTTCCCATCTCTTACCCC +
Preference number: 5 (lower is better)
Translates to: LGLTICPFLGPGVLQ*CGGQGSASLPISYP
Trigger: GGGGTAAGAGATGGGAAGAGAGGCTGATCCCTGTCCCCCACAGCACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562475.5
ENST00000563577.1
ENST00000564579.1
ENST00000568703.5
CDS CCA 90 bp TGGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTGCTCTGAGTTCTaGACCTGGGCCAGGAGCACCTGCATCTGCTTGGCACAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: WLTVPCRVRSSCSEF*TWARSTCICLAQSS
Trigger: TGAGGACTGTGCCAAGCAGATGCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS-3UTR CAA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCACTGGCTCACGGTCCCTaGCAGGGTCCGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KTPERGLMVQEWGKASFPLAHGP*QGPQQL
Trigger: CAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAG...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGTCATGGTGCAGGCACTaGTGGGTGGTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGSWCRH*WVVTSS
Trigger: GGAGCTGGTCACCACCCACAAGTGCCTGCACCATGA...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp AGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGGGGTGGGGCTCGGCCCGGAGCCCTaGGTTTTCCTCATTCAACCG +
Preference number: 5 (lower is better)
Translates to: RPHGSGVGKGVFPRVGVGLGPEP*VFLIQP
Trigger: CGGTTGAATGAGGAAAACCAAGGGCTCCGGGCCGAG...CCCCACCCCCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS GCA 90 bp CCTCTTGGCACTGCCGCTGCACCGCAGCCACAGCCTCGGCCTTCGTaGTCTCGCTCACCTCTGCCACAGCCTTCATGGTTTCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: PLGTAAAPQPQPRPS*SRSPLPQPSWFPFL
Trigger: CAGAAATGGAAACCATGAAGGCTGTGGCAGAGGTGAGCGAGAGCACGAAGGCCGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000563577.1
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS GCA 90 bp ATTTACGCTGGATCAGACTCTGAGCTGGGCTCTTTCAGGATGGCCTaGAGCGAGGCCACCTCCTCTTGGCACTGCCGCTGCACCGCAGCC +
Preference number: 5 (lower is better)
Translates to: IYAGSDSELGSFRMA*SEATSSWHCRCTAA
Trigger: GGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGAGCCCAGCTCAGAGTCTGATCCAGCGTAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS CCA 90 bp TGCATCTGCTTGGCACAGTCCTCATTGCTCCGTCTCAGGCCCTCTTaGAGCTCGTCCCGCTCGCGACTGACGCTCTCCAGGTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CICLAQSSLLRLRPS*SSSRSRLTLSRSFC
Trigger: GCAGAAGGACCTGGAGAGCGTCAGTCGCGAGCGGGACGAGCTCCAAGAGGGCCTGAGACGGAGCAATGAGGACTGTGCCAAGCAGATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS-3UTR CAA 90 bp CAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGTCTGGGAGCTGGGCCTaGCTCTGTTCCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: QGRWKSHPRPQSEASWFRSGSWA*LCSCCT
Trigger: GGTGCAGCAGGAACAGAGCAAGGCCCAGCTCCCAGA...CCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp CCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTGCAGCCGCAGCACCTaGGCCCTCTGTTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PSKTPERGLMVQEWGKASCSRST*ALCSER
Trigger: CCTCTCAGAACAGAGGGCCAAGGTGCTGCGGCTGCA...AGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp AGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTGTCATGCAGACCTGCAGCCGCAGCACCTaGGCCCTCTGTTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLEAWVAAVDKRLSVMQTCSRST*ALCSER
Trigger: CCTCTCAGAACAGAGGGCCAAGGTGCTGCGGCTGCA...GGTCTGCATGACACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp GCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCCATGATGCTGCGCACTaGCTCCAGGGTCTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: AIQDPRARPHGSGVGKGVHDAAH*LQGLSL
Trigger: CAGGCTGAGACCCTGGAGCAAGTGCGCAGCATCATG...GACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp CCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTGGACCCCTCAGGTGTCCTaGATGTCCCTGACGTCCGTG +
Preference number: 5 (lower is better)
Translates to: PERGLMVQEWGKASFPGWTPQVS*MSLTSV
Trigger: CACGGACGTCAGGGACATCAAGGACACCTGAGGGGT...CCACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCACCTGAGCCTGCACCTTaGGTTCCGGGAGGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: KTPERGLMVQEWGKASFPPEPAP*VPGGAW
Trigger: CCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGG...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp CAGCAGCCAGAAAGCCGCAGGCCTGAGCCTGCACCTTTGGTTCCGGGAGGGGCTCGGAAAAGTCTGGCCTaGCCTCTGTGCAAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: QQPESRRPEPAPLVPGGARKSLA*PLCKLG
Trigger: TCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCG...AGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGGCCTGCGGCTTTCTGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp AGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTCGGCCCGGAGCCCTaGGTTTTCCTCATTCAACCG +
Preference number: 5 (lower is better)
Translates to: SHPRPQSEASWFRSGERRLGPEP*VFLIQP
Trigger: CGGTTGAATGAGGAAAACCAAGGGCTCCGGGCCGAG...ACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp TCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGTCTGGGAGCTGGGCCTaGCTCTGTTCCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: SGTVEKPSKTPERGLMVQSGSWA*LCSCCT
Trigger: GGTGCAGCAGGAACAGAGCAAGGCCCAGCTCCCAGA...CTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp AAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCTGCAGCCGCAGCACCTaGGCCCTCTGTTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: KAIQDPRARPHGSGVGKGCSRST*ALCSER
Trigger: CCTCTCAGAACAGAGGGCCAAGGTGCTGCGGCTGCA...GCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp GGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGCATGATGCTGCGCACTaGCTCCAGGGTCTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GTVEKPSKTPERGLMVQEHDAAH*LQGLSL
Trigger: CAGGCTGAGACCCTGGAGCAAGTGCGCAGCATCATG...CTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp TCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCTCATGGTGCAGGCACTaGTGGGTGGTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SQGRWKSHPRPQSEASWFSWCRH*WVVTSS
Trigger: GGAGCTGGTCACCACCCACAAGTGCCTGCACCATGA...GAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGTCATGGTGCAGGCACTaGTGGGTGGTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVSWCRH*WVVTSS
Trigger: GGAGCTGGTCACCACCCACAAGTGCCTGCACCATGA...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTCTCGGCCCGGAGCCCTaGGTTTTCCTCATTCAACCG +
Preference number: 5 (lower is better)
Translates to: HPRPQSEASWFRSGERRLLGPEP*VFLIQP
Trigger: CGGTTGAATGAGGAAAACCAAGGGCTCCGGGCCGAG...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp TCTCAGGGACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCCATGATGCTGCGCACTaGCTCCAGGGTCTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SQGRWKSHPRPQSEASWFHDAAH*LQGLSL
Trigger: CAGGCTGAGACCCTGGAGCAAGTGCGCAGCATCATG...GAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTCCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp GACGGTGGAAAAGCCATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGACCCCTCAGGTGTCCTaGATGTCCCTGACGTCCGTG +
Preference number: 5 (lower is better)
Translates to: DGGKAIQDPRARPHGSGVTPQVS*MSLTSV
Trigger: CACGGACGTCAGGGACATCAAGGACACCTGAGGGGT...CACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATGGCTTTTCCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTACCCCTCAGGTGTCCTaGATGTCCCTGACGTCCGTG +
Preference number: 5 (lower is better)
Translates to: HPRPQSEASWFRSGERRLTPQVS*MSLTSV
Trigger: CACGGACGTCAGGGACATCAAGGACACCTGAGGGGT...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp CCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCAGGGTCGGAAAAGTCTGGCCTaGCCTCTGTGCAAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: PQSEASWFRSGERRLSQGRKSLA*PLCKLG
Trigger: TCCAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCG...ACCCTGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp CCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCTTGGCACAGTCCTCATaGCTCCGTCTCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: PRPQSEASWFRSGERRLSLAQSS*LRLRPS
Trigger: AGAGGGCCTGAGACGGAGCAATGAGGACTGTGCCAA...GGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp AAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTTCCCATTGGCACAGTCCTCATaGCTCCGTCTCAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KTPERGLMVQEWGKASFPLAQSS*LRLRPS
Trigger: AGAGGGCCTGAGACGGAGCAATGAGGACTGTGCCAA...TGGGAAAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp TGCCTCTGTGCAAGCTTGGAGGCCTGGGTCGCCGCTGTGGACAAGCGTCTTAGTAGCACCTGCATCTGCTaGGCACAGTCCTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: CLCASLEAWVAAVDKRLSSTCIC*AQSSLL
Trigger: GAGCAATGAGGACTGTGCCAAGCAGATGCAGGTGCT...ACTAAGACGCTTGTCCACAGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358201.9
CDS GCA 90 bp AGGACGCCTGCCTTTCAAGCCCGGAAGAGGATCCTTAAGAGGTCTTaGCCGGCGTCTCTCCGTGACCTTGGAAGCCCTGCTCCAATTATG +
Preference number: 5 (lower is better)
Translates to: RTPAFQARKRILKRS*PASLRDLGSPAPIM
Trigger: CATAATTGGAGCAGGGCTTCCAAGGTCACGGAGAGACGCCGGGCAAGACCTCTTAAGGATCCTCTTCCGGGCTTGAAAGGCAGGCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS-3UTR CAA 90 bp CATCCAAGACCCCAGAGCGAGGCCTCATGGTTCAGGAGTGGGGAAAGGCGTCTTAGCACCTGCATCTGCTaGGCACAGTCCTCATTGCTC +
Preference number: 5 (lower is better)
Translates to: HPRPQSEASWFRSGERRLSTCIC*AQSSLL
Trigger: GAGCAATGAGGACTGTGCCAAGCAGATGCAGGTGCT...AAGACGCCTTTCCCCACTCCTGAACCATGAGGCCTCGCTCTGGGGTCTTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000544477.5
CDS-3UTR CAA 90 bp GGTGATCTGGGCTTCATAGCTGCTGATGGAGTCATGTTGCCCAGGCTGGTCTTGGCTGATGGAGTCATGTaGCCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: GDLGFIAADGVMLPRLVLADGVM*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAACATGACTCCATCAGC...CAAGACCAGCCTGGGCAACATGACTCCATCAGCAGCTATGAAGCCCAGATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS GCA 90 bp ATGATGGCTGGCACTCAAGCAGTCATCTTGGACCATGAGGCAATGTaGTACCTTTTCCATCTGCTTCTCCAGGGAGTCCAGGGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: MMAGTQAVILDHEAM*YLFHLLLQGVQGVG
Trigger: GCCTACCCCCTGGACTCCCTGGAGAAGCAGATGGAAAAGGTAGCACATTGCCTCATGGTCCAAGATGACTGCTTGAGTGCCAGCCATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561803.5
CDS TCA 90 bp CCGGCCCTTAATCGTAGTAATAAATATTTACGCTGGATCAGACTCTaGGCTGGGCTCTTTCAGGATGGCCTGCAGCGAGGCCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: PALNRSNKYLRWIRL*AGLFQDGLQRGHLL
Trigger: GAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGAGCCCAGCTCAGAGTCTGATCCAGCGTAAATATTTATTACTACGATTAAGGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS-3UTR CAA 90 bp TATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGGGTTCCGGGAGGGGCTaGGGCCCCTCACCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: YLLKINDGKVWPCLCASLGSGRG*GPSPRC
Trigger: ACACCTGGGTGAGGGGCCCAAGCCCCTCCCGGAACC...CAAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTGCGCAGCTGCCGCCATaGCCTCAGCGCAAACGGCGG +
Preference number: 5 (lower is better)
Translates to: LFIENKRRKSLALPLCKLAQLPP*PQRKRR
Trigger: CCGCCGTTTGCGCTGAGGCAATGGCGGCAGCTGCGC...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCGAGGCCACCTCCTCTaGGCACTGCCGCTGCACCGC +
Preference number: 5 (lower is better)
Translates to: LFIENKRRKSLALPLCKLRGHLL*ALPLHR
Trigger: GCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS-3UTR CAA 90 bp TGCTTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGTGCCTCTGTGCAAGCTaGGAGGCCTGGGTCGCCGCT +
Preference number: 5 (lower is better)
Translates to: CLFIENKRRKSLALPLCKCLCAS*EAWVAA
Trigger: AGCGGCGACCCAGGCCTCCAAGCTTGCACAGAGGCA...CTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS TCA 90 bp GACTGGGCCAGGGCTGATTCTATTTCCCAGAAGTCCAGACTAAAATaGGGTTGGTTTGGGGAACTGAGAAGTTTCTCGCCCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: DWARADSISQKSRLK*GWFGELRSFSPIFR
Trigger: CCTGAAGATGGGCGAGAAACTTCTCAGTTCCCCAAACCAACCTCATTTTAGTCTGGACTTCTGGGAAATAGAATCAGCCCTGGCCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561501.5
CDS TCA 90 bp ACTCCTCTATTGGCTGTCCCAGCACAAGTGATCACGTTTAACTTCTaGAGGCCTGGACAGAATCTTGAGTGGGTCCGCCATTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: TPLLAVPAQVITFNF*RPGQNLEWVRHSIP
Trigger: TGGAATGGAATGGCGGACCCACTCAAGATTCTGTCCAGGCCTTCAGAAGTTAAACGTGATCACTTGTGCTGGGACAGCCAATAGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566762.1
CDS-3UTR CAA 90 bp TTATTTATTGAAAATAAACGACGGAAAAGTCTGGCCTTGCCTCTGTGCAAGCTTCCTGAGCCTGCACCTTaGGTTCCGGGAGGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LFIENKRRKSLALPLCKLPEPAP*VPGGAW
Trigger: CCAAGCCCCTCCCGGAACCAAAGGTGCAGGCTCAGG...AAGCTTGCACAGAGGCAAGGCCAGACTTTTCCGTCGTTTATTTTCAATAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357573.10
ENST00000358201.9
CDS TCA 72 bp CTCGCTCCCTCGCTGCCCCTGCCCGGAGCCAGCCTTTaGTCGGCTCCGGCCGCCCTTCCGCCCGAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: LAPSLPLPGASL*SAPAALPPEPG
Trigger: GCCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp TCGATCCGCAGGCGCTCGGCCCCGTGCTCCTGGGCCTaGAGCCGGGCCCTCGCCTCTTGCCGCGTGCAGCAC +
Preference number: 6 (lower is better)
Translates to: SIRRRSAPCSWA*SRALASCRVQH
Trigger: GTGCTGCACGCGGCAAGAGGCGAGGGCCCGGCTGCAGGCCCAGGAGCACGGGGCCGAGCGCCTGCGGATCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS GCA 72 bp CCTGCGGAGAGCTCCCCCTCGCTCCCTCGCTGCCCCTaGCCGGAGCCAGCCTTTGATCGGCTCCGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: PAESSPSLPRCP*PEPAFDRLRPP
Trigger: GGGCGGCCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAGGGGGAGCTCTCCGCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CAA 72 bp CCTCGCTCCCTCGCTGCCCCTGCCCGGAGCCAGCCTTaGATCGGCTCCGGCCGCCCTTCCGCCCGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: PRSLAAPARSQP*IGSGRPSARAW
Trigger: CCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp CACCGGCCTGCGGAGAGCTCCCCCTCGCTCCCTCGCTaGCCCTGCCCGGAGCCAGCCTTTGATCGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: HRPAESSPSLPR*PCPEPAFDRLR
Trigger: CCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAGGGGGAGCTCTCCGCAGGCCGGTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp CCGCCGCTCATCGTCGTCCGCGGCCACCGGCGCAGCTaGCGCCATTGCCTCAGCGCAAACGGCGGATTCCCG +
Preference number: 6 (lower is better)
Translates to: PPLIVVRGHRRS*RHCLSANGGFP
Trigger: CGGGAATCCGCCGTTTGCGCTGAGGCAATGGCGGCAGCTGCGCCGGTGGCCGCGGACGACGATGAGCGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
ENST00000561803.5
ENST00000562590.5
ENST00000570030.1
CDS GCA 72 bp CCGTGCTCCTGGGCCTGCAGCCGGGCCCTCGCCTCTTaGCGCGTGCAGCACAGCAGCTGCTGCAGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: PCSWACSRALAS*RVQHSSCCSSG
Trigger: GCCAGAGCTGCAGCAGCTGCTGTGCTGCACGCGGCAAGAGGCGAGGGCCCGGCTGCAGGCCCAGGAGCACGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS CAA 90 bp GCTCCGGCCGCCCTTCCGCCCGAGCCTGGCTTGCGTTACCGCGAATaGTGGCGGGGCCCTCCCTGCACCTCCGCCCTCTTGGAGCGTCCC +
Preference number: 6 (lower is better)
Translates to: APAALPPEPGLRYRE*WRGPPCTSALLERP
Trigger: GGGACGCTCCAAGAGGGCGGAGGTGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CAA 90 bp GCCGCCGCTCATCGTCGTCCGCGGCCACCGGCGCAGCTGCCGCCATaGCCTCAGCGCAAACGGCGGATTCCCGCACTCCCTGGTGACGGA +
Preference number: 6 (lower is better)
Translates to: AAAHRRPRPPAQLPP*PQRKRRIPALPGDG
Trigger: TCCGTCACCAGGGAGTGCGGGAATCCGCCGTTTGCGCTGAGGCAATGGCGGCAGCTGCGCCGGTGGCCGCGGACGACGATGAGCGGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562590.5
ENST00000570030.1
CDS CAA 90 bp AGAGCTCCCCCTCGCTCCCTCGCTGCCCCTGCCCGGAGCCAGCCTTaGATCGGCTCCGGCCGCCCTTCCGCCCGAGCCTGGCTTGCGTTA +
Preference number: 6 (lower is better)
Translates to: RAPPRSLAAPARSQP*IGSGRPSARAWLAL
Trigger: TAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATCAAAGGCTGGCTCCGGGCAGGGGCAGCGAGGGAGCGAGGGGGAGCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp GATCGGCTCCGGCCGCCCTTCCGCCCGAGCCTGGCTTaGGTTACCGCGAATTGTGGCGGGGCCCTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: DRLRPPFRPSLA*VTANCGGALPA
Trigger: TGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp ATCGTCGTCCGCGGCCACCGGCGCAGCTGCCGCCATTaGCTCAGCGCAAACGGCGGATTCCCGCACTCCCTG +
Preference number: 6 (lower is better)
Translates to: IVVRGHRRSCRH*LSANGGFPHSL
Trigger: CAGGGAGTGCGGGAATCCGCCGTTTGCGCTGAGGCAATGGCGGCAGCTGCGCCGGTGGCCGCGGACGACGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562590.5
ENST00000570030.1
CDS GCA 72 bp GCCTGCAGCGAGGCCACCTCCTCTTGGCACTGCCGCTaGACCGCAGCCACAGCCTCGGCCTTCGTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: ACSEATSSWHCR*TAATASAFVLS
Trigger: CGAGAGCACGAAGGCCGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCGCTGCAGGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000563577.1
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS GCA 72 bp GGCTTGCGTTACCGCGAATTGTGGCGGGGCCCTCCCTaGACCTCCGCCCTCTTGGAGCGTCCCTCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: GLRYRELWRGPP*TSALLERPSGQ
Trigger: CTGCCCCGAGGGACGCTCCAAGAGGGCGGAGGTGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp CCCTGCTCCAATTATGCCTCCTCCGGGACACCGGCCTaGGGAGAGCTCCCCCTCGCTCCCTCGCTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: PCSNYASSGTPA*GELPLAPSLPL
Trigger: CAGGGGCAGCGAGGGAGCGAGGGGGAGCTCTCCGCAGGCCGGTGTCCCGGAGGAGGCATAATTGGAGCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CCA 72 bp TCCGCTCAGCTCCTCCAGAGGCTCCAGCGGGGGCGATaGATCCCGGGACAGGGGCAGCAACTCCGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: SAQLLQRLQRGR*IPGQGQQLRGA
Trigger: GGCTCCACGGAGTTGCTGCCCCTGTCCCGGGATCCATCGCCCCCGCTGGAGCCTCTGGAGGAGCTGAGCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
ENST00000567483.5
ENST00000568703.5
CDS CCA 72 bp CCTTTGATCGGCTCCGGCCGCCCTTCCGCCCGAGCCTaGCTTGCGTTACCGCGAATTGTGGCGGGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PLIGSGRPSARA*LALPRIVAGPS
Trigger: GGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAGGGCGGCCGGAGCCGATCAAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CAA 72 bp CATCGTCGTCCGCGGCCACCGGCGCAGCTGCCGCCATaGCCTCAGCGCAAACGGCGGATTCCCGCACTCCCT +
Preference number: 6 (lower is better)
Translates to: HRRPRPPAQLPP*PQRKRRIPALP
Trigger: AGGGAGTGCGGGAATCCGCCGTTTGCGCTGAGGCAATGGCGGCAGCTGCGCCGGTGGCCGCGGACGACGATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562590.5
ENST00000570030.1
CDS CAA 72 bp GCCCTTCCGCCCGAGCCTGGCTTGCGTTACCGCGAATaGTGGCGGGGCCCTCCCTGCACCTCCGCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ALPPEPGLRYRE*WRGPPCTSALL
Trigger: CAAGAGGGCGGAGGTGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS TCA 72 bp GCCTCAGCGCAAACGGCGGATTCCCGCACTCCCTGGTaGCGGAGCGCACCGCTTCCGGGTCCTCTCGGCTGT +
Preference number: 6 (lower is better)
Translates to: ASAQTADSRTPW*RSAPLPGPLGC
Trigger: ACAGCCGAGAGGACCCGGAAGCGGTGCGCTCCGTCACCAGGGAGTGCGGGAATCCGCCGTTTGCGCTGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358201.9
ENST00000562590.5
CDS GCA 72 bp AGGATGGCCTGCAGCGAGGCCACCTCCTCTTGGCACTaGCGCTGCACCGCAGCCACAGCCTCGGCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: RMACSEATSSWH*RCTAATASAFV
Trigger: CACGAAGGCCGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCGCTGCAGGCCATCCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000563577.1
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS CCA 72 bp AGCTCACCTGACTCGGCCTCACCATTTGCCCCTTCCTaGGACCGGGAGTCCTCCAGTGCAGCCCCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: SSPDSASPFAPS*DRESSSAAPGR
Trigger: GCGGCCGGGGGCTGCACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAGTCAGGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562590.5
ENST00000564473.5
ENST00000570030.1
CDS CCA 72 bp CTTCCGCCCGAGCCTGGCTTGCGTTACCGCGAATTGTaGCGGGGCCCTCCCTGCACCTCCGCCCTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: LPPEPGLRYREL*RGPPCTSALLE
Trigger: CTCCAAGAGGGCGGAGGTGCAGGGAGGGCCCCGCCACAATTCGCGGTAACGCAAGCCAGGCTCGGGCGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS TCA 72 bp CTGCCAGGGCGCCTGCCAGCTCAGCCCGAAGCCGGCTaGGCTCACCTGACTCGGCCTCACCATTTGCCCCTT +
Preference number: 6 (lower is better)
Translates to: LPGRLPAQPEAG*AHLTRPHHLPL
Trigger: AAGGGGCAAATGGTGAGGCCGAGTCAGGTGAGCTCAGCCGGCTTCGGGCTGAGCTGGCAGGCGCCCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000563577.1
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS GCA 72 bp GCCTGGCTCACGGTCCCTTGCAGGGTCCGCAGCAGCTaGTCTGAGTTCTGGACCTGGGCCAGGAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: AWLTVPCRVRSS*SEFWTWARSTC
Trigger: GCAGGTGCTCCTGGCCCAGGTCCAGAACTCAGAGCAGCTGCTGCGGACCCTGCAAGGGACCGTGAGCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS GCA 72 bp CCCACGTGCCCCCTTCCACCACGTGCAACTGATTCCTaGTGGACTCCTCGCCCTCCTGCCCTAGGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: PTCPLPPRATDS*WTPRPPALGPP
Trigger: TGGGGGCCCTAGGGCAGGAGGGCGAGGAGTCCAGCAGGAATCAGTTGCACGTGGTGGAAGGGGGCACGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS TCA 72 bp GTCTCAGGCCCTCTTGGAGCTCGTCCCGCTCGCGACTaGCGCTCTCCAGGTCCTTCTGCAGCTGTCGGCCCT +
Preference number: 6 (lower is better)
Translates to: VSGPLGARPARD*RSPGPSAAVGP
Trigger: AGGGCCGACAGCTGCAGAAGGACCTGGAGAGCGTCAGTCGCGAGCGGGACGAGCTCCAAGAGGGCCTGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS CCA 72 bp ACGTGCCCCCTTCCACCACGTGCAACTGATTCCTGCTaGACTCCTCGCCCTCCTGCCCTAGGGCCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: TCPLPPRATDSC*TPRPPALGPPG
Trigger: ACCTGGGGGCCCTAGGGCAGGAGGGCGAGGAGTCCAGCAGGAATCAGTTGCACGTGGTGGAAGGGGGCACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CAA 90 bp GCTGATGGAGTCTTTCAGGATGGCCTGCAGCGAGGCCACCTCCTCTaGGCACTGCCGCTGCACCGCAGCCACAGCCTCGGCCTTCGTGCT +
Preference number: 6 (lower is better)
Translates to: ADGVFQDGLQRGHLL*ALPLHRSHSLGLRA
Trigger: AGCACGAAGGCCGAGGCTGTGGCTGCGGTGCAGCGGCAGTGCCAAGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGACTCCATCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS GCA 72 bp CGTCTCTCCGTGACCTTGGAAGCCCTGCTCCAATTATaGCTCCTCCGGGACACCGGCCTGCGGAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: RLSVTLEALLQL*LLRDTGLRRAP
Trigger: GGGAGCTCTCCGCAGGCCGGTGTCCCGGAGGAGGCATAATTGGAGCAGGGCTTCCAAGGTCACGGAGAGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp TGGCTGCAGGGGCCCTGTTCTGGCCACGGCACCAGCTaGCCCAAAACCCTCTTACCTACCTGGCACCGGTTC +
Preference number: 6 (lower is better)
Translates to: WLQGPCSGHGTS*PKTLLPTWHRF
Trigger: GAACCGGTGCCAGGTAGGTAAGAGGGTTTTGGGGCAGCTGGTGCCGTGGCCAGAACAGGGCCCCTGCAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CCA 72 bp AGCTCACCTGACTCGGCCTCACCATTTGCCCCTTCCTaGGACCGGGAGTCCTCCAGTGCTGTGGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: SSPDSASPFAPS*DRESSSAVGDR
Trigger: CCTGTCCCCCACAGCACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAGTCAGGTGAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562475.5
ENST00000563577.1
ENST00000564579.1
ENST00000568703.5
CDS CAA 90 bp CCCCAGGCCACCTACCGGCTTAGCAAGTCCTGCAACCTAGTACTGTaGCCTTCATCTGGGGCCTCCTTCACCTGGGCCCGCCCGGCTCAC +
Preference number: 6 (lower is better)
Translates to: PQATYRLSKSCNLVL*PSSGASFTWARPAH
Trigger: GTGAGCCGGGCGGGCCCAGGTGAAGGAGGCCCCAGATGAAGGCAACAGTACTAGGTTGCAGGACTTGCTAAGCCGGTAGGTGGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568703.5
CDS TCA 72 bp GAGAAGGAGGAGATGGAGGCGCTGTCATCGCAGTTGTaGGCGAAGGCCTCAGCGGCTGGACCCCCATCTCCG +
Preference number: 6 (lower is better)
Translates to: EKEEMEALSSQL*AKASAAGPPSP
Trigger: CGGAGATGGGGGTCCAGCCGCTGAGGCCTTCGCTCACAACTGCGATGACAGCGCCTCCATCTCCTCCTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
ENST00000567483.5
ENST00000568703.5
CDS GCA 72 bp ACTGCCGCTGCACCGCAGCCACAGCCTCGGCCTTCGTaGTCTCGCTCACCTCTGCCACAGCCTTCATGGTTT +
Preference number: 6 (lower is better)
Translates to: TAAAPQPQPRPS*SRSPLPQPSWF
Trigger: AAACCATGAAGGCTGTGGCAGAGGTGAGCGAGAGCACGAAGGCCGAGGCTGTGGCTGCGGTGCAGCGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000561803.5
ENST00000562475.5
ENST00000562590.5
ENST00000563577.1
ENST00000564473.5
ENST00000564579.1
ENST00000567483.5
ENST00000568703.5
ENST00000570030.1
CDS GCA 72 bp TCCGTGAGTGGCGCCTCATCCATGATGCTGCGCACTTaGTCCAGGGTCTCAGCCTGGCGGATCCGCTCTAGG +
Preference number: 6 (lower is better)
Translates to: SVSGASSMMLRT*SRVSAWRIRSR
Trigger: CCTAGAGCGGATCCGCCAGGCTGAGACCCTGGAGCAAGTGCGCAGCATCATGGATGAGGCGCCACTCACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS GCA 72 bp GGATCAGACTCTGAGCTGGGCTCTTTCAGGATGGCCTaGAGCGAGGCCACCTCCTCTTGGCACTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: GSDSELGSFRMA*SEATSSWHCRC
Trigger: GCAGCGGCAGTGCCAAGAGGAGGTGGCCTCGCTGCAGGCCATCCTGAAAGAGCCCAGCTCAGAGTCTGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS CCA 72 bp TTGGCACAGTCCTCATTGCTCCGTCTCAGGCCCTCTTaGAGCTCGTCCCGCTCGCGACTGACGCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LAQSSLLRLRPS*SSSRSRLTLSR
Trigger: CCTGGAGAGCGTCAGTCGCGAGCGGGACGAGCTCCAAGAGGGCCTGAGACGGAGCAATGAGGACTGTGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358201.9
ENST00000544477.5
ENST00000562590.5
CDS CCA 72 bp AGCTCACCTGACTCGGCCTCACCATTTGCCCCTTCCTaGGACCGGGAGTCCTCCAGTGCTGTCACTGGCCCT +
Preference number: 6 (lower is better)
Translates to: SSPDSASPFAPS*DRESSSAVTGP
Trigger: AGGGCCAGTGACAGCACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGGTGAGGCCGAGTCAGGTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567483.5
CDS GCA 72 bp ACCATTTGCCCCTTCCTGGGACCGGGAGTCCTCCAGTaGTGTGGGGGACAGGGATCAGCCTCTCTTCCCATC +
Preference number: 6 (lower is better)
Translates to: TICPFLGPGVLQ*CGGQGSASLPI
Trigger: GATGGGAAGAGAGGCTGATCCCTGTCCCCCACAGCACTGGAGGACTCCCGGTCCCAGGAAGGGGCAAATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562475.5
ENST00000563577.1
ENST00000564579.1
ENST00000568703.5
CDS CAA 90 bp GGAAGAGGATCCTTAAGAGGTCTTGCCCGGCGTCTCTCCGTGACCTaGGAAGCCCTGCTCCAATTATGCCTCCTCCGGGACACCGGCCTG +
Preference number: 6 (lower is better)
Translates to: GRGSLRGLARRLSVT*EALLQLCLLRDTGL
Trigger: CAGGCCGGTGTCCCGGAGGAGGCATAATTGGAGCAGGGCTTCCAAGGTCACGGAGAGACGCCGGGCAAGACCTCTTAAGGATCCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS GCA 72 bp CTGGGATTAGCTCAAGATCAAACAGCTCTGTGTGGCTaGAGGGGCCCTGTTCTGGCCACGGCACCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LGLAQDQTALCG*RGPVLATAPAA
Trigger: GGCAGCTGGTGCCGTGGCCAGAACAGGGCCCCTGCAGCCACACAGAGCTGTTTGATCTTGAGCTAATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CCA 72 bp CTGCATCTCTGTCTGCAGCTGCTCCCACTGAGTGTCTaGGACGAGCTGGTAGCCAGGAGGGGGCAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: LHLCLQLLPLSV*DELVARRGQVD
Trigger: ATCTACCTGCCCCCTCCTGGCTACCAGCTCGTCCCAGACACTCAGTGGGAGCAGCTGCAGACAGAGATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357573.10
CDS CCA 72 bp CCCTCAGGTGTCCTTGATGTCCCTGACGTCCGTGAGTaGCGCCTCATCCATGATGCTGCGCACTTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PSGVLDVPDVRE*RLIHDAAHLLQ
Trigger: CTGGAGCAAGTGCGCAGCATCATGGATGAGGCGCCACTCACGGACGTCAGGGACATCAAGGACACCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS GCA 72 bp GCCTTTCAAGCCCGGAAGAGGATCCTTAAGAGGTCTTaGCCGGCGTCTCTCCGTGACCTTGGAAGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: AFQARKRILKRS*PASLRDLGSPA
Trigger: AGCAGGGCTTCCAAGGTCACGGAGAGACGCCGGGCAAGACCTCTTAAGGATCCTCTTCCGGGCTTGAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CCA 72 bp GAGTCTGGGATTAGCTCAAGATCAAACAGCTCTGTGTaGCTGCAGGGGCCCTGTTCTGGCCACGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: ESGISSRSNSSV*LQGPCSGHGTS
Trigger: GCTGGTGCCGTGGCCAGAACAGGGCCCCTGCAGCCACACAGAGCTGTTTGATCTTGAGCTAATCCCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CAA 72 bp TCCTTAAGAGGTCTTGCCCGGCGTCTCTCCGTGACCTaGGAAGCCCTGCTCCAATTATGCCTCCTCCGGGAC +
Preference number: 6 (lower is better)
Translates to: SLRGLARRLSVT*EALLQLCLLRD
Trigger: GTCCCGGAGGAGGCATAATTGGAGCAGGGCTTCCAAGGTCACGGAGAGACGCCGGGCAAGACCTCTTAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562590.5
CDS CAA 90 bp CCTTGGTTTTCCTCATTCAACCGCTTTACCTCATGGTGCAGGCACTaGTGGGTGGTGACCAGCTCCGCCATCTGCAGCTGCACCCGCTCC +
Preference number: 6 (lower is better)
Translates to: PWFSSFNRFTSWCRH*WVVTSSAICSCTRS
Trigger: GGAGCGGGTGCAGCTGCAGATGGCGGAGCTGGTCACCACCCACAAGTGCCTGCACCATGAGGTAAAGCGGTTGAATGAGGAAAACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS GCA 72 bp CTCTTACCCCAGGCCACCTACCGGCTTAGCAAGTCCTaGAACCTAGTACTGTTGCCTTCATCTGGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLPQATYRLSKS*NLVLLPSSGAS
Trigger: GGAGGCCCCAGATGAAGGCAACAGTACTAGGTTGCAGGACTTGCTAAGCCGGTAGGTGGCCTGGGGTAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568703.5
CDS GCA 72 bp TGGGTCCGCCATTCCATTCCAAGTCGGCCCTCACCGTaGACTTCCTCTTCTCCCGCCAGATTCTTCAAAGTG +
Preference number: 6 (lower is better)
Translates to: WVRHSIPSRPSP*TSSSPARFFKV
Trigger: CACTTTGAAGAATCTGGCGGGAGAAGAGGAAGTGCACGGTGAGGGCCGACTTGGAATGGAATGGCGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566762.1
CDS GCA 72 bp CCTTGGTTTTCCTCATTCAACCGCTTTACCTCATGGTaGAGGCACTTGTGGGTGGTGACCAGCTCCGCCATC +
Preference number: 6 (lower is better)
Translates to: PWFSSFNRFTSW*RHLWVVTSSAI
Trigger: GATGGCGGAGCTGGTCACCACCCACAAGTGCCTGCACCATGAGGTAAAGCGGTTGAATGAGGAAAACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357573.10
ENST00000358201.9
ENST00000544477.5
CDS TCA 72 bp TTGGCTGTCCCAGCACAAGTGATCACGTTTAACTTCTaGAGGCCTGGACAGAATCTTGAGTGGGTCCGCCAT +
Preference number: 6 (lower is better)
Translates to: LAVPAQVITFNF*RPGQNLEWVRH
Trigger: ATGGCGGACCCACTCAAGATTCTGTCCAGGCCTTCAGAAGTTAAACGTGATCACTTGTGCTGGGACAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566762.1
CDS GCA 72 bp AGGGGTTCTTTGCTCCGTCTCTACTGTTTCAAATACTaGCCAACCTCAAAGCCCAGCTCCAAAGCTACCTCC +
Preference number: 6 (lower is better)
Translates to: RGSLLRLYCFKY*PTSKPSSKATS
Trigger: GGAGGTAGCTTTGGAGCTGGGCTTTGAGGTTGGGCAGTATTTGAAACAGTAGAGACGGAGCAAAGAACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566762.1
CDS TCA 72 bp AATCGTAGTAATAAATATTTACGCTGGATCAGACTCTaGGCTGGGCTCTTTCAGGATGGCCTGCAGCGAGGC +
Preference number: 6 (lower is better)
Translates to: NRSNKYLRWIRL*AGLFQDGLQRG
Trigger: GCCTCGCTGCAGGCCATCCTGAAAGAGCCCAGCTCAGAGTCTGATCCAGCGTAAATATTTATTACTACGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563577.1
CDS TCA 72 bp CATCTCAGACTCCTCTATTGGCTGTCCCAGCACAAGTaGTCACGTTTAACTTCTGAAGGCCTGGACAGAATC +
Preference number: 6 (lower is better)
Translates to: HLRLLYWLSQHK*SRLTSEGLDRI
Trigger: GATTCTGTCCAGGCCTTCAGAAGTTAAACGTGATCACTTGTGCTGGGACAGCCAATAGAGGAGTCTGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566762.1
CDS CAA 72 bp AATGTGGACATGATGGCTGGCACTCAAGCAGTCATCTaGGACCATGAGGCAATGTGCTACCTTTTCCATCTG +
Preference number: 6 (lower is better)
Translates to: NVDMMAGTQAVI*DHEAMCYLFHL
Trigger: CAGATGGAAAAGGTAGCACATTGCCTCATGGTCCAAGATGACTGCTTGAGTGCCAGCCATCATGTCCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561803.5
CDS TCA 72 bp TTCAGGGTTGATCAATCATCAGTGAGGGACAAGAAATaGCATGGGACAAGGCAACAGATAGAAGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: FRVDQSSVRDKK*HGTRQQIEAGS
Trigger: GCTCCCAGCTTCTATCTGTTGCCTTGTCCCATGTCATTTCTTGTCCCTCACTGATGATTGATCAACCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561501.5
CDS TCA 72 bp TGGGGAACTGAGAAGTTTCTCGCCCATCTTCAGGGTTaGTCAATCATCAGTGAGGGACAAGAAATGACATGG +
Preference number: 6 (lower is better)
Translates to: WGTEKFLAHLQG*SIISEGQEMTW
Trigger: CCATGTCATTTCTTGTCCCTCACTGATGATTGATCAACCCTGAAGATGGGCGAGAAACTTCTCAGTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561501.5