RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB8A (Homo sapiens)

Ensembl gene IDs: ENSG00000167461

Ensembl transcript IDs: ENST00000300935.8, ENST00000586682.1, ENST00000587156.5, ENST00000588105.1, ENST00000589697.1, ENST00000590899.5, ENST00000592971.1

Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTaGTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGG +
Preference number: 1 (lower is better)
Translates to: PGPGDRLPCSGFGSC*SWNHRWPSGTSLPW
Trigger: CCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 90 bp GGTGATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTaGGAGCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTC +
Preference number: 1 (lower is better)
Translates to: GDASWSWRSVALLRV*ELLLLEPPLAFWDL
Trigger: GAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 90 bp ATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATGGGGTAATCCATaGGCTCTACCATCTTGTCCAGACCCACCCCCAGCACCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: MGGISSEVAARWGNP*ALPSCPDPPPAPGH
Trigger: ATGGCCAGGTGCTGGGGGTGGGTCTGGACAAGATGGTAGAGCCCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp ACAGTTACTAAAATAAACGATTTCTCAATTGCATTCTGGTGGCCGTaGGCCCGGTGGCCGCGGCGTGGGCGGGGCGTTGGAGGTGGGAGG +
Preference number: 1 (lower is better)
Translates to: TVTKINDFSIAFWWP*ARWPRRGRGVGGGR
Trigger: CCTCCCACCTCCAACGCCCCGCCCACGCCGCGGCCACCGGGCCCACGGCCACCAGAATGCAATTGAGAAATCGTTTATTTTAGTAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 90 bp CTCGATGGGGACCGCAGACGGGCCTGCAGACCTAACCCCTGGCTGTaGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTT +
Preference number: 1 (lower is better)
Translates to: LDGDRRRACRPNPWL*TGEAAPGFFPSQCF
Trigger: AAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGTTAGGTCTGCAGGCCCGTCTGCGGTCCCCATCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp TTGATGCTCGATGGGGACCGCAGACGGGCCTGCAGACCTAACCCCTaGCTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAA +
Preference number: 1 (lower is better)
Translates to: LMLDGDRRRACRPNP*LWTGEAAPGFFPSQ
Trigger: TTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGTTAGGTCTGCAGGCCCGTCTGCGGTCCCCATCGAGCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp GAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTCCTaGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTG +
Preference number: 1 (lower is better)
Translates to: EKRWKWAPNLLGDAS*SWRSVALLRVWELL
Trigger: CAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 90 bp AGACTGCTGTGCGGTCAGCTTGCCGCCGTGGAATGCCTTGTGTCTTaGCCATGTCCAGCCAAGGGTACAACGTGCTTGTTCCCGATCACC +
Preference number: 1 (lower is better)
Translates to: RLLCGQLAAVECLVS*PCPAKGTTCLFPIT
Trigger: GGTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp GTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGACCCTaGATAGAGTGGAAGGAATGCCCTGGAAAGCCAGCCAGGAGAGGG +
Preference number: 1 (lower is better)
Translates to: VLGNDWTWVWSWEGP*IEWKECPGKPARRG
Trigger: CCCTCTCCTGGCTGGCTTTCCAGGGCATTCCTTCCACTCTATCCAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp CGGCTGAAAATCAAGCCAGACTGCTGTGCGGTCAGCTTGCCGCCGTaGAATGCCTTGTGTCTTGGCCATGTCCAGCCAAGGGTACAACGT +
Preference number: 1 (lower is better)
Translates to: RLKIKPDCCAVSLPP*NALCLGHVQPRVQR
Trigger: ACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTGATTTTCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR TCA 90 bp CCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTaGTGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTG +
Preference number: 1 (lower is better)
Translates to: PKLREEVEVGAKSPG*CFLVLAIGCLAQGL
Trigger: CAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR GCA 90 bp GAAAATCAAGCCAGACTGCTGTGCGGTCAGCTTGCCGCCGTGGAATaGCTTGTGTCTTGGCCATGTCCAGCCAAGGGTACAACGTGCTTG +
Preference number: 1 (lower is better)
Translates to: ENQARLLCGQLAAVE*LVSWPCPAKGTTCL
Trigger: CAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp TTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTaGGTGATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: LSKTERRGGSGRQIS*VMLPGPGDRLPCSG
Trigger: CCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 90 bp AGTCTTTTGATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATaGGGTAATCCATGGGCTCTACCATCTTGTCCAGACCCACCCCCA +
Preference number: 1 (lower is better)
Translates to: SLLMMGGISSEVAAR*GNPWALPSCPDPPP
Trigger: TGGGGGTGGGTCTGGACAAGATGGTAGAGCCCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCATCAAAAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTaGGAAGGACCCTGGATAGAGTGGAAGGAATGCCCTGGAAAGCCA +
Preference number: 1 (lower is better)
Translates to: ALCQVLGNDWTWVWS*EGPWIEWKECPGKP
Trigger: TGGCTTTCCAGGGCATTCCTTCCACTCTATCCAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp AGTACAGCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTaGTCTTGGGAAGGACCCTGGATAGAGTGGAAGGAATGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: STALCQVLGNDWTWV*SWEGPWIEWKECPG
Trigger: TCCAGGGCATTCCTTCCACTCTATCCAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGCTGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR TCA 90 bp CTATGGGACAGCAGAGCTGTCAAAACAGAACCCAATGATGACGGCTaGAAATCAAGCCAGACTGCTGTGCGGTCAGCTTGCCGCCGTGGA +
Preference number: 1 (lower is better)
Translates to: LWDSRAVKTEPNDDG*KSSQTAVRSACRRG
Trigger: TCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTGATTTTCAGCCGTCATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR TCA 90 bp TGTGATCTTGGCTGTGAGTACAGCTCTCTGCCAAGTCCTAGGGAATaGCTGGACCTGGGTGTGGTCTTGGGAAGGACCCTGGATAGAGTG +
Preference number: 1 (lower is better)
Translates to: CDLGCEYSSLPSPRE*LDLGVVLGRTLDRV
Trigger: CACTCTATCCAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGCTGTACTCACAGCCAAGATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp ATCTTGGCTGTGAGTACAGCTCTCTGCCAAGTCCTAGGGAATGACTaGACCTGGGTGTGGTCTTGGGAAGGACCCTGGATAGAGTGGAAG +
Preference number: 1 (lower is better)
Translates to: ILAVSTALCQVLGND*TWVWSWEGPWIEWK
Trigger: CTTCCACTCTATCCAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGCTGTACTCACAGCCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 90 bp GTGGAATGCCTTGTGTCTTGGCCATGTCCAGCCAAGGGTACAACGTaGTTGTTCCCGATCACCCAGGTTTGCCATTGGAAGTCAAAGACA +
Preference number: 1 (lower is better)
Translates to: VECLVSWPCPAKGTT*LFPITQVCHWKSKT
Trigger: TGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR TCA 90 bp GTCTGGTTGCCTCTGGACTTCACTCTGCATGCCTTTTCCCTTTGCTaGTTTTGCTGTGATCTTGGCTGTGAGTACAGCTCTCTGCCAAGT +
Preference number: 1 (lower is better)
Translates to: VWLPLDFTLHAFSLC*FCCDLGCEYSSLPS
Trigger: ACTTGGCAGAGAGCTGTACTCACAGCCAAGATCACAGCAAAATCAGCAAAGGGAAAAGGCATGCAGAGTGAAGTCCAGAGGCAACCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 90 bp TGTCCAGCCAAGGGTACAACGTGCTTGTTCCCGATCACCCAGGTTTaGCATTGGAAGTCAAAGACAGAATCGCTTCATGGCACTACAGAT +
Preference number: 1 (lower is better)
Translates to: CPAKGTTCLFPITQV*HWKSKTESLHGTTD
Trigger: ATCTGTAGTGCCATGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 90 bp GCCAAGGGTACAACGTGCTTGTTCCCGATCACCCAGGTTTGCCATTaGAAGTCAAAGACAGAATCGCTTCATGGCACTACAGATGTGGAA +
Preference number: 1 (lower is better)
Translates to: AKGTTCLFPITQVCH*KSKTESLHGTTDVE
Trigger: TTCCACATCTGTAGTGCCATGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 90 bp AGAGGATTCTGGATGCTTCTGTCTGGTTGCCTCTGGACTTCACTCTaGATGCCTTTTCCCTTTGCTGATTTTGCTGTGATCTTGGCTGTG +
Preference number: 1 (lower is better)
Translates to: RGFWMLLSGCLWTSL*MPFPFADFAVILAV
Trigger: CACAGCCAAGATCACAGCAAAATCAGCAAAGGGAAAAGGCATGCAGAGTGAAGTCCAGAGGCAACCAGACAGAAGCATCCAGAATCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR TCA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGTGGGAGGGCCCCGGCTaGGTGAGGGGCTCACTCAGA +
Preference number: 2 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRWEGPG*VRGSLR
Trigger: TCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCA...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR TCA 90 bp GGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGCCAGAGGCAGAGGCCTaGCACTGGCTGTGGTCGACG +
Preference number: 2 (lower is better)
Translates to: GLLGPRFRGRGREPASWWPEAEA*HWLWST
Trigger: CGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCTGG...CCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR TCA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGAGGGCCCCGGCTGAGTaGGGGGCTCACTCAGAACAG +
Preference number: 2 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRRAPAE*GAHSEQ
Trigger: CTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCT...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CAA 90 bp TCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTaGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTG +
Preference number: 2 (lower is better)
Translates to: SWSWRSVALLRVWEL*LLEPPLAFWDLASV
Trigger: CACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR CCA 90 bp CTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTACAGGCACAGTCAGCTaGGCTGAGCGAGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: LAFWDLASVVGDVNQPPGTGTVS*AERGSE
Trigger: CTCTGAGCCTCGCTCAGCCCAGCTGACTGTGCCTGT...ACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR TCA 90 bp TTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGAGCTCACAGTCAGCTGGGCTaGGCGAGGCTCAGAGTAAGG +
Preference number: 2 (lower is better)
Translates to: FWDLASVVGDVNQPPGGAHSQLG*ARLRVR
Trigger: CCTTACTCTGAGCCTCGCTCAGCCCAGCTGACTGTG...AGCTCCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CCA 90 bp CGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTGGCCAGGCTGGGCATCTCCTCTGAGGTaGCCGCTCGATGGGGTAATC +
Preference number: 2 (lower is better)
Translates to: RAVCQKPGDAGSPCWPGWASPLR*PLDGVI
Trigger: GATTACCCCATCGAGCGGCCACCTCAGAGGAGATGC...CCAGCCTGGCCAACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CCA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGACCCCTTGATGCTCGATaGGGACCGCAGACGGGCCTG +
Preference number: 2 (lower is better)
Translates to: ALCQVLGNDWTWVWSWEGPLDAR*GPQTGL
Trigger: CAGGCCCGTCTGCGGTCCCCATCGAGCATCAAGGGG...TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 90 bp CCCAGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTaGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: PRGRGLTLAVVDGHT*TPSLSLNIQRVGGP
Trigger: GGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR TCA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGAGCTTTGTGTTGCAGTaGGGCCACAAAGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRSFVLQ*GHKAKA
Trigger: GGCCTTTGCTTTGTGGCCTCACTGCAACACAAAGCT...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR GCA 90 bp GACACAGTGGCCGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTGGCGATCGGTTGCCTTaGTCAGGGTTTGGGAGCTGT +
Preference number: 2 (lower is better)
Translates to: DTVAELCARSQVTQAHHVGDRLP*SGFGSC
Trigger: ACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCC...AACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCGGCCACTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 90 bp CAGACTGCTGTGCGGTCAGCTTGCCGCCGTGGAATGCCTTGTGTCTaGGCCATGTCCAGCCAAGGGTACAACGTGCTTGTTCCCGATCAC +
Preference number: 2 (lower is better)
Translates to: QTAVRSACRRGMPCV*AMSSQGYNVLVPDH
Trigger: GTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR TCA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGTGGGAGGGCCCCGGCTaGGTGAGGGGCTCACTCAGA +
Preference number: 2 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQWEGPG*VRGSLR
Trigger: TCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCA...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR CCA 90 bp GACACAGTGGCCGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTCTGGCCATGTCCGTGTaGCCTACAGGGAAAATGTGG +
Preference number: 2 (lower is better)
Translates to: DTVAELCARSQVTQAHHVLAMSV*PTGKMW
Trigger: CCACATTTTCCCTGTAGGCCACACGGACATGGCCAG...AACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCGGCCACTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 90 bp ATCAAGCCAGACTGCTGTGCGGTCAGCTTGCCGCCGTGGAATGCCTaGTGTCTTGGCCATGTCCAGCCAAGGGTACAACGTGCTTGTTCC +
Preference number: 2 (lower is better)
Translates to: IKPDCCAVSLPPWNA*CLGHVQPRVQRACS
Trigger: GGAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR TCA 90 bp TCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTAGGGCCCCGGCTGAGTaGGGGGCTCACTCAGAACAG +
Preference number: 2 (lower is better)
Translates to: SLSLSEYTTCGWARSADVRAPAE*GAHSEQ
Trigger: CTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCT...AACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR GCA 90 bp CCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCTCCTGGAACCACGGTGGAGCTTTGTGTTaGAGTGAGGCCACAAAGCAA +
Preference number: 2 (lower is better)
Translates to: PGDRLPCSGFGSCCSWNHGGALC*SEATKQ
Trigger: TTGCTTTGTGGCCTCACTGCAACACAAAGCTCCACC...GTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR GCA 90 bp CTTGTTCCCGATCACCCAGGTTTGCCATTGGAAGTCAAAGACAGAATCGCTTCAGACCGCAGACGGGCCTaGAGACCTAACCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LVPDHPGLPLEVKDRIASDRRRA*RPNPWL
Trigger: CAGCCAGGGGTTAGGTCTGCAGGCCCGTCTGCGGTC...TGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR GCA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGAAAAATCAAGCCAGACTaGTGTGCGGTCAGCTTGCCG +
Preference number: 2 (lower is better)
Translates to: ALCQVLGNDWTWVWSWEGKIKPD*CAVSLP
Trigger: CGGCAAGCTGACCGCACAGCAGTCTGGCTTGATTTT...TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTTCCTGGAACCACCGCTaGCCTTCTGGGACCTCGCTT +
Preference number: 2 (lower is better)
Translates to: SKTERRGGSGRQISWVMLSWNHR*PSGTSL
Trigger: AAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGA...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR CCA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGTCCTGGAACCACCGCTaGCCTTCTGGGACCTCGCTT +
Preference number: 2 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQSWNHR*PSGTSL
Trigger: AAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGA...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR CCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTGGGAGCTGTTGCTCCTaGAACCACCGCTGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: SKTERRGGSGRQISWVMLGSCCS*NHRWPS
Trigger: AGAAGGCCAGCGGTGGTTCCAGGAGCAACAGCTCCC...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR CCA 90 bp TTGATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATGGGGTAATCCATGGGAATGCCTTGTGTCTTaGCCATGTCCAGCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: LMMGGISSEVAARWGNPWECLVS*PCPAKG
Trigger: ACCCTTGGCTGGACATGGCCAAGACACAAGGCATTC...CCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 90 bp AGCCACTGCACCAAGCCAGGAGGCTTCTTTTCCCAATTTAGTCTTTaGATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATGGGGT +
Preference number: 2 (lower is better)
Translates to: SHCTKPGGFFSQFSL*MMGGISSEVAARWG
Trigger: ACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCATCAAAAGACTAAATTGGGAAAAGAAGCCTCCTGGCTTGGTGCAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR GCA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCAAACGATTTCTCAATTaGATTCTGGTGGCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCKRFLN*ILVAVG
Trigger: GCCCACGGCCACCAGAATGCAATTGAGAAATCGTTT...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR TCA 90 bp CGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTGGCCAGGCTGGATTCAAAAGAAACGATaGTGCCAATGGTTTGGATTG +
Preference number: 2 (lower is better)
Translates to: RAVCQKPGDAGSPCWPGWIQKKR*CQWFGL
Trigger: CAATCCAAACCATTGGCATCATCGTTTCTTTTGAAT...CCAGCCTGGCCAACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR GCA 90 bp GGGACAGCAGAGCTGTCAAAACAGAACCCAATGATGACGGCTGAAAATCAAGCCCTTGCCGCCGTGGAATaGCTTGTGTCTTGGCCATGT +
Preference number: 2 (lower is better)
Translates to: GTAELSKQNPMMTAENQALAAVE*LVSWPC
Trigger: ACATGGCCAAGACACAAGGCATTCCACGGCGGCAAG...GGCTTGATTTTCAGCCGTCATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR GCA 90 bp GGCTTCTTTTCCCAATTTAGTCTTTTGATGATGGGTGGCATCTCCTCTGAGGTGGCTGTGCGGTCAGCTTaGCGCCGTGGAATGCCTTGT +
Preference number: 2 (lower is better)
Translates to: GFFSQFSLLMMGGISSEVAVRSA*RRGMPC
Trigger: ACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGC...CACCTCAGAGGAGATGCCACCCATCATCAAAAGACTAAATTGGGAAAAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 90 bp GAATGCCTTGTGTCTTGGCCATGTCCAGCCAAGGGTACAACGTGCTaGTTCCCGATCACCCAGGTTTGCCATTGGAAGTCAAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: ECLVSWPCPAKGTTC*FPITQVCHWKSKTE
Trigger: TTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR TCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTCTCCCTCTCTCTCTCTaGATATACAACGTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: SKTERRGGSGRQISWVMLLPLSL*IYNVWV
Trigger: CACCCACACGTTGTATATTCAGAGAGAGAGAGGGAG...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CAA 90 bp AGCCAAGGGTACAACGTGCTTGTTCCCGATCACCCAGGTTTGCCATaGGAAGTCAAAGACAGAATCGCTTCATGGCACTACAGATGTGGA +
Preference number: 2 (lower is better)
Translates to: SQGYNVLVPDHPGLP*EVKDRIASWHYRCG
Trigger: TCCACATCTGTAGTGCCATGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 90 bp ATGTCCAGCCAAGGGTACAACGTGCTTGTTCCCGATCACCCAGGTTaGCCATTGGAAGTCAAAGACAGAATCGCTTCATGGCACTACAGA +
Preference number: 2 (lower is better)
Translates to: MSSQGYNVLVPDHPG*PLEVKDRIASWHYR
Trigger: TCTGTAGTGCCATGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR GCA 90 bp TCCCAGTCGCAGTCCCTATGGGACAGCAGAGCTGTCAAAACAGAACCCAATGATCCGATCACCCAGGTTTaGCATTGGAAGTCAAAGACA +
Preference number: 2 (lower is better)
Translates to: SQSQSLWDSRAVKTEPNDPITQV*HWKSKT
Trigger: TGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGG...ATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCCATAGGGACTGCGACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR GCA 90 bp CTTGTTCCCGATCACCCAGGTTTGCCATTGGAAGTCAAAGACAGAATCGCTTCAAAACGATTTCTCAATTaGATTCTGGTGGCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: LVPDHPGLPLEVKDRIASKRFLN*ILVAVG
Trigger: GCCCACGGCCACCAGAATGCAATTGAGAAATCGTTT...TGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR GCA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGATTCTTTCCTTCTCAATaGTTTACACAGGATTTCCTT +
Preference number: 2 (lower is better)
Translates to: ALCQVLGNDWTWVWSWEGFFPSQ*FTQDFL
Trigger: AAGGAAATCCTGTGTAAAGCATTGAGAAGGAAAGAA...TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp GATTTCTCAATTGCATTCTGGTGGCCGTGGGCCCGGTaGCCGCGGCGTGGGCGGGGCGTTGGAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: DFSIAFWWPWAR*PRRGRGVGGGR
Trigger: CCTCCCACCTCCAACGCCCCGCCCACGCCGCGGCCACCGGGCCCACGGCCACCAGAATGCAATTGAGAAATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 72 bp GATGGGGACCGCAGACGGGCCTGCAGACCTAACCCCTaGCTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: DGDRRRACRPNP*LWTGEAAPGFF
Trigger: AAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGTTAGGTCTGCAGGCCCGTCTGCGGTCCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR-3UTR CAA 90 bp CTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGTCGACGGTCACACCTaGACTCCCTCTCTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: LAFWDLASVVGDVNQPPGVDGHT*TPSLSL
Trigger: CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGAC...ACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 72 bp GACCGCAGACGGGCCTGCAGACCTAACCCCTGGCTGTaGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: DRRRACRPNPWL*TGEAAPGFFPS
Trigger: AGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGTTAGGTCTGCAGGCCCGTCTGCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR GCA 72 bp GCCAGACTGCTGTGCGGTCAGCTTGCCGCCGTGGAATaGCTTGTGTCTTGGCCATGTCCAGCCAAGGGTACA +
Preference number: 3 (lower is better)
Translates to: ARLLCGQLAAVE*LVSWPCPAKGT
Trigger: TGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CAA 90 bp GACACAGTGGCCGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTTGCCTTGCTCAGGGTTaGGGAGCTGTTGCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: DTVAELCARSQVTQAHHVCLAQG*GAVAPG
Trigger: TCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCA...AACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCGGCCACTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CAA 90 bp TTGATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATGGGGTAATCCATGGACACACAGCGTCCCCTaGATGCTCGATGGGGACCGC +
Preference number: 3 (lower is better)
Translates to: LMMGGISSEVAARWGNPWTHSVP*MLDGDR
Trigger: GCGGTCCCCATCGAGCATCAAGGGGACGCTGTGTGT...CCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 72 bp TGGGTGATGCTTCCTGGTCCTGGCGATCGGTTGCCTTaGTCAGGGTTTGGGAGCTGTTGCTCCTGGAACCAC +
Preference number: 3 (lower is better)
Translates to: WVMLPGPGDRLP*SGFGSCCSWNH
Trigger: GTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CCA 72 bp ATCAAGCCAGACTGCTGTGCGGTCAGCTTGCCGCCGTaGAATGCCTTGTGTCTTGGCCATGTCCAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: IKPDCCAVSLPP*NALCLGHVQPR
Trigger: CCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp ATCTCCTCTGAGGTGGCCGCTCGATGGGGTAATCCATaGGCTCTACCATCTTGTCCAGACCCACCCCCAGCA +
Preference number: 3 (lower is better)
Translates to: ISSEVAARWGNP*ALPSCPDPPPA
Trigger: TGCTGGGGGTGGGTCTGGACAAGATGGTAGAGCCCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp TTGGGAAGGACCCTGGATAGAGTGGAAGGAATGCCCTaGAAAGCCAGCCAGGAGAGGGCCCCTAGAAGGACC +
Preference number: 3 (lower is better)
Translates to: LGRTLDRVEGMP*KASQERAPRRT
Trigger: GGTCCTTCTAGGGGCCCTCTCCTGGCTGGCTTTCCAGGGCATTCCTTCCACTCTATCCAGGGTCCTTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CAA 90 bp GACACAGTGGCCGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTCCCGATCACCCAGGTTaGCCATTGGAAGTCAAAGAC +
Preference number: 3 (lower is better)
Translates to: DTVAELCARSQVTQAHHVPDHPG*PLEVKD
Trigger: GTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGG...AACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCGGCCACTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR TCA 72 bp AGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTaGTGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: REEVEVGAKSPG*CFLVLAIGCLA
Trigger: AGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR TCA 72 bp GGCTGTGAGTACAGCTCTCTGCCAAGTCCTAGGGAATaGCTGGACCTGGGTGTGGTCTTGGGAAGGACCCTG +
Preference number: 3 (lower is better)
Translates to: GCEYSSLPSPRE*LDLGVVLGRTL
Trigger: CAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGCTGTACTCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp TGCGGTCAGCTTGCCGCCGTGGAATGCCTTGTGTCTTaGCCATGTCCAGCCAAGGGTACAACGTGCTTGTTC +
Preference number: 3 (lower is better)
Translates to: CGQLAAVECLVS*PCPAKGTTCLF
Trigger: GAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp ATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATaGGGTAATCCATGGGCTCTACCATCTTGTCCAGAC +
Preference number: 3 (lower is better)
Translates to: MMGGISSEVAAR*GNPWALPSCPD
Trigger: GTCTGGACAAGATGGTAGAGCCCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp AATGACTGGACCTGGGTGTGGTCTTGGGAAGGACCCTaGATAGAGTGGAAGGAATGCCCTGGAAAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: NDWTWVWSWEGP*IEWKECPGKPA
Trigger: GGCTGGCTTTCCAGGGCATTCCTTCCACTCTATCCAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 72 bp CCAATGATGACGGCTGAAAATCAAGCCAGACTGCTGTaGGGTCAGCTTGCCGCCGTGGAATGCCTTGTGTCT +
Preference number: 3 (lower is better)
Translates to: PMMTAENQARLL*GQLAAVECLVS
Trigger: AGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTGATTTTCAGCCGTCATCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp CTGGCGTGGTTGACCTGGTCCCAGTCGCAGTCCCTATaGGACAGCAGAGCTGTCAAAACAGAACCCAATGAT +
Preference number: 3 (lower is better)
Translates to: LAWLTWSQSQSL*DSRAVKTEPND
Trigger: ATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCCATAGGGACTGCGACTGGGACCAGGTCAACCACGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp GTGAGTACAGCTCTCTGCCAAGTCCTAGGGAATGACTaGACCTGGGTGTGGTCTTGGGAAGGACCCTGGATA +
Preference number: 3 (lower is better)
Translates to: VSTALCQVLGND*TWVWSWEGPWI
Trigger: TATCCAGGGTCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGCTGTACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CAA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTGTCGACGGTCACACCTaGACTCCCTCTCTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: SKTERRGGSGRQISWVMLVDGHT*TPSLSL
Trigger: CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGAC...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR GCA 72 bp CTTGTGTCTTGGCCATGTCCAGCCAAGGGTACAACGTaGTTGTTCCCGATCACCCAGGTTTGCCATTGGAAG +
Preference number: 3 (lower is better)
Translates to: LVSWPCPAKGTT*LFPITQVCHWK
Trigger: CTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR-3UTR CAA 90 bp TTGATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATGGGGTAATCCATGGCACCCAGGTTTGCCATaGGAAGTCAAAGACAGAATC +
Preference number: 3 (lower is better)
Translates to: LMMGGISSEVAARWGNPWHPGLP*EVKDRI
Trigger: GATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTG...CCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 72 bp GATTTTGCTGTGATCTTGGCTGTGAGTACAGCTCTCTaGCAAGTCCTAGGGAATGACTGGACCTGGGTGTGG +
Preference number: 3 (lower is better)
Translates to: DFAVILAVSTAL*QVLGNDWTWVW
Trigger: CCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGCTGTACTCACAGCCAAGATCACAGCAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR TCA 72 bp AGCAGAGCTGTCAAAACAGAACCCAATGATGACGGCTaGAAATCAAGCCAGACTGCTGTGCGGTCAGCTTGC +
Preference number: 3 (lower is better)
Translates to: SRAVKTEPNDDG*KSSQTAVRSAC
Trigger: GCAAGCTGACCGCACAGCAGTCTGGCTTGATTTTCAGCCGTCATCATTGGGTTCTGTTTTGACAGCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 72 bp CCCACTGTGAGAGGATTCTGGATGCTTCTGTCTGGTTaGCTCTGGACTTCACTCTGCATGCCTTTTCCCTTT +
Preference number: 3 (lower is better)
Translates to: PTVRGFWMLLSG*LWTSLCMPFPF
Trigger: AAAGGGAAAAGGCATGCAGAGTGAAGTCCAGAGGCAACCAGACAGAAGCATCCAGAATCCTCTCACAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 72 bp AAGGGTACAACGTGCTTGTTCCCGATCACCCAGGTTTaGCATTGGAAGTCAAAGACAGAATCGCTTCATGGC +
Preference number: 3 (lower is better)
Translates to: KGTTCLFPITQV*HWKSKTESLHG
Trigger: GCCATGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR GCA 72 bp TGGATGCTTCTGTCTGGTTGCCTCTGGACTTCACTCTaGATGCCTTTTCCCTTTGCTGATTTTGCTGTGATC +
Preference number: 3 (lower is better)
Translates to: WMLLSGCLWTSL*MPFPFADFAVI
Trigger: GATCACAGCAAAATCAGCAAAGGGAAAAGGCATGCAGAGTGAAGTCCAGAGGCAACCAGACAGAAGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CCA 72 bp GACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTaGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCA +
Preference number: 3 (lower is better)
Translates to: DSLSLSEYTTCG*ARSADVTGKIA
Trigger: TGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGTGGGAGGGCCCCGGCTaGGTGAGGGGCTCACTCAGA +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGWEGPG*VRGSLR
Trigger: TCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCA...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp GTGGGAGGGCCCCGGCTGAGTGAGGGGCTCACTCAGAACAGGCACAGTCAGCTGCCAGAGGCAGAGGCCTaGCACTGGCTGTGGTCGACG +
Preference number: 4 (lower is better)
Translates to: VGGPRLSEGLTQNRHSQLPEAEA*HWLWST
Trigger: CGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCTGG...CAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGGTGGCATCTCCTCTaGGGTGGCCGCTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRGWHLL*GGRSMG
Trigger: CCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCC...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp GTGGGAGGGCCCCGGCTGAGTGAGGGGCTCACTCAGAACAGGCACAGTCAGCTGGACCGCAGACGGGCCTaGAGACCTAACCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VGGPRLSEGLTQNRHSQLDRRRA*RPNPWL
Trigger: CAGCCAGGGGTTAGGTCTGCAGGCCCGTCTGCGGTC...CAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGCCAGAGGCAGAGGCCTaGCACTGGCTGTGGTCGACG +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGPEAEA*HWLWST
Trigger: CGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCTGG...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp AACGATTTCTCAATTGCATTCTGGTGGCCGTGGGCCCGGTGGCCGCGGCGTGGGCCCCTTGATGCTCGATaGGGACCGCAGACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NDFSIAFWWPWARWPRRGPLDAR*GPQTGL
Trigger: CAGGCCCGTCTGCGGTCCCCATCGAGCATCAAGGGG...CCCACGCCGCGGCCACCGGGCCCACGGCCACCAGAATGCAATTGAGAAATCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp GTGGGAGGGCCCCGGCTGAGTGAGGGGCTCACTCAGAACAGGCACAGTCAGCTGAGTGGCCGAGCTGTGTaGCAGAAGCCAGGTGACGCA +
Preference number: 4 (lower is better)
Translates to: VGGPRLSEGLTQNRHSQLSGRAV*QKPGDA
Trigger: TGCGTCACCTGGCTTCTGGCACACAGCTCGGCCACT...CAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp GGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGCTGGGTGATGCTTCCTaGTCCTGGCGATCGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GLLGPRFRGRGREPASWWLGDAS*SWRSVA
Trigger: GGCAACCGATCGCCAGGACCAGGAAGCATCACCCAG...CCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGAGCTCCACCGCTGGCCTTCTaGGACCTCGCTTCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: FWDLASVVGDVNQPPGGAPPLAF*DLASVV
Trigger: TACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGG...AGCTCCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp CTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTTCCTGGAACCACCGCTaGCCTTCTGGGACCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LAFWDLASVVGDVNQPPGSWNHR*PSGTSL
Trigger: AAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGA...ACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGTCCTGGAACCACCGCTaGCCTTCTGGGACCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGSWNHR*PSGTSL
Trigger: AAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGA...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGCTGGGTGATGCTTCCTaGTCCTGGCGATCGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGLGDAS*SWRSVA
Trigger: GGCAACCGATCGCCAGGACCAGGAAGCATCACCCAG...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp GTGGGAGGGCCCCGGCTGAGTGAGGGGCTCACTCAGAACAGGCACAGTCAGCTGTGCAGACCTAACCCCTaGCTGTGGACAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VGGPRLSEGLTQNRHSQLCRPNP*LWTGEA
Trigger: AGCCTCTCCTGTCCACAGCCAGGGGTTAGGTCTGCA...CAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp AGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCACACAGCGTCCCCTTaGTGCTCGATGGGGACCGCA +
Preference number: 4 (lower is better)
Translates to: RGRGLTLAVVDGHTLTPSHTASP*CSMGTA
Trigger: TGCGGTCCCCATCGAGCATCAAGGGGACGCTGTGTG...AGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp GTGGGAGGGCCCCGGCTGAGTGAGGGGCTCACTCAGAACAGGCACAGTCAGCTGCGTGAACCAGCCTCCTaGTGGAGCTTTGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VGGPRLSEGLTQNRHSQLREPAS*WSFVLQ
Trigger: CTGCAACACAAAGCTCCACCAGGAGGCTGGTTCACG...CAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCCCCACCCCCAGCACCTaGCCATGTCCGTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCPTPST*PCPCGL
Trigger: TAGGCCACACGGACATGGCCAGGTGCTGGGGGTGGG...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGTGGAAGGAATGCCCTaGAAAGCCAGCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGVEGMP*KASQER
Trigger: CCTCTCCTGGCTGGCTTTCCAGGGCATTCCTTCCAC...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp AGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCACAGTCAGCTGGGCTaGGCGAGGCTCAGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: RGRGLTLAVVDGHTLTPSHSQLG*ARLRVR
Trigger: CCTTACTCTGAGCCTCGCTCAGCCCAGCTGACTGTG...AGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGGCCAAATCTCCTGGGTaGTGCTTCCTGGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLAKSPG*CFLVLA
Trigger: CGCCAGGACCAGGAAGCATCACCCAGGAGATTTGGC...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp TTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGAGCTCTGGTCTCGAACACCTaGGCTCAAGTGATCAGCCCG +
Preference number: 4 (lower is better)
Translates to: FWDLASVVGDVNQPPGGALVSNT*AQVISP
Trigger: CGGGCTGATCACTTGAGCTCAGGTGTTCGAGACCAG...AGCTCCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp GGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGCACATCGGAAAAAGCTaGTCCTCTTCTGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: GLLGPRFRGRGREPASWWHIGKS*SSSAGP
Trigger: CGGACCAGCAGAAGAGGAGCAGCTTTTTCCGATGTG...CCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTCTTGCCGCCGTGGAATaGCTTGTGTCTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LAFWDLASVVGDVNQPPGLAAVE*LVSWPC
Trigger: ACATGGCCAAGACACAAGGCATTCCACGGCGGCAAG...ACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCCCACCGCTGGCCTTCTaGGACCTCGCTTCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCPPLAF*DLASVV
Trigger: TACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGG...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGAGAAGAGGTGGAAGTaGGCGCCAAATCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGEKRWK*APNLLG
Trigger: ACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTC...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGCCTAACCCCTGGCTGTaGACAGGAGAGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLPNPWL*TGEAAP
Trigger: TGGAGCAGCCTCTCCTGTCCACAGCCAGGGGTTAGG...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CAA 72 bp TTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTaGGGAGCTGTTGCTCCTGGAACCACCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FLVLAIGCLAQG*GAVAPGTTAGL
Trigger: AAGGCCAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp GTGGGAGGGCCCCGGCTGAGTGAGGGGCTCACTCAGAACAGGCACAGTCAGCTGCGATCAGCAGCAGCTTaGACAGGTAATCGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VGGPRLSEGLTQNRHSQLRSAAA*TGNRRS
Trigger: AGACCTACGATTACCTGTTCAAGCTGCTGCTGATCG...CAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGTGTAGTAGGCCGTTGTaGTCGTCCGAAACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGCSRPL*SSETVP
Trigger: AGGAACGGTTTCGGACGATCACAACGGCCTACTACA...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp AACGATTTCTCAATTGCATTCTGGTGGCCGTGGGCCCGGTGGCCGCGGCGTGGGACGTCTGCAGAGGCGTaGTCCTCAATGTTGCGAATC +
Preference number: 4 (lower is better)
Translates to: NDFSIAFWWPWARWPRRGTSAEA*SSMLRI
Trigger: GATTCGCAACATTGAGGAGCACGCCTCTGCAGACGT...CCCACGCCGCGGCCACCGGGCCCACGGCCACCAGAATGCAATTGAGAAATCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGAGCTGTGGACAGGAGAGGCTaGTCCAGGCTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FWDLASVVGDVNQPPGGAVDRRG*SRLLSF
Trigger: GAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCAC...AGCTCCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCGGGAGCTGTTGCTCCTaGAACCACCGCTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCGSCCS*NHRWPS
Trigger: AGAAGGCCAGCGGTGGTTCCAGGAGCAACAGCTCCC...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp AGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTGCATCTCCTCTGAGGTaGCCGCTCGATGGGGTAATC +
Preference number: 4 (lower is better)
Translates to: RGRGLTLAVVDGHTLTPSASPLR*PLDGVI
Trigger: GATTACCCCATCGAGCGGCCACCTCAGAGGAGATGC...AGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp AACGATTTCTCAATTGCATTCTGGTGGCCGTGGGCCCGGTGGCCGCGGCGTGGGGGACCCTGGATAGAGTaGAAGGAATGCCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: NDFSIAFWWPWARWPRRGGPWIE*KECPGK
Trigger: CTTTCCAGGGCATTCCTTCCACTCTATCCAGGGTCC...CCCACGCCGCGGCCACCGGGCCCACGGCCACCAGAATGCAATTGAGAAATCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 72 bp CTGGGTGATGCTTCCTGGTCCTGGCGATCGGTTGCCTaGCTCAGGGTTTGGGAGCTGTTGCTCCTGGAACCA +
Preference number: 4 (lower is better)
Translates to: LGDASWSWRSVA*LRVWELLLLEP
Trigger: TGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CAA 72 bp GACTGCTGTGCGGTCAGCTTGCCGCCGTGGAATGCCTaGTGTCTTGGCCATGTCCAGCCAAGGGTACAACGT +
Preference number: 4 (lower is better)
Translates to: DCCAVSLPPWNA*CLGHVQPRVQR
Trigger: ACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp GGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGAGGGCCCCGGCTGAGTaGGGGGCTCACTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: GCGRRSHLDSLSLSEYTTRAPAE*GAHSEQ
Trigger: CTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCT...CGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp ACCCCTGGCTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTGCCAAATCTCCTGGGTaGTGCTTCCTGGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: TPGCGQERLLQASFLLNAAKSPG*CFLVLA
Trigger: CGCCAGGACCAGGAAGCATCACCCAGGAGATTTGGC...AGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTCATCTTTTCGACGTCTaGAGAGGCGTGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LAFWDLASVVGDVNQPPGHLFDV*RGVLLN
Trigger: ATTGAGGAGCACGCCTCTGCAGACGTCGAAAAGATG...ACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGTGGAGCTTTGTGTTaGAGTGAGGCCACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRGGALC*SEATKQ
Trigger: TTGCTTTGTGGCCTCACTGCAACACAAAGCTCCACC...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CAACTTCAGGAGGACCATGTGACGGCTGTGGTTGTTTTCGGGGTCACTTGCAGCCAAGCCAGACTGCTGTaGGGTCAGCTTGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: QLQEDHVTAVVVFGVTCSQARLL*GQLAAV
Trigger: CACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTG...GCTGCAAGTGACCCCGAAAACAACCACAGCCGTCACATGGTCCTCCTGAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp ACCCCTGGCTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTACAGGCACAGTCAGCTaGGCTGAGCGAGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TPGCGQERLLQASFLLNATGTVS*AERGSE
Trigger: CTCTGAGCCTCGCTCAGCCCAGCTGACTGTGCCTGT...AGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp ACCCCTGGCTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTGGGAGCTGTTGCTCCTaGAACCACCGCTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPGCGQERLLQASFLLNAGSCCS*NHRWPS
Trigger: AGAAGGCCAGCGGTGGTTCCAGGAGCAACAGCTCCC...AGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGCTGGCCATGTCCGTGTaGCCTACAGGGAAAATGTGG +
Preference number: 4 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLLAMSV*PTGKMW
Trigger: CCACATTTTCCCTGTAGGCCACACGGACATGGCCAG...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGAGGGCCCCGGCTGAGTaGGGGGCTCACTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQRAPAE*GAHSEQ
Trigger: CTGTTCTGAGTGAGCCCCTCACTCAGCCGGGGCCCT...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp AGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTAGCTTTGTGTTGCAGTaGGGCCACAAAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: RGRGLTLAVVDGHTLTPSSFVLQ*GHKAKA
Trigger: GGCCTTTGCTTTGTGGCCTCACTGCAACACAAAGCT...AGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCCAGCATGATGCCCATTaGACCCCTGTAGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCQHDAH*TPVVGR
Trigger: ACGGCCTACTACAGGGGTGCAATGGGCATCATGCTG...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAAGGCGATCGGTTGCCTTaGTCAGGGTTTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PDTGCGRRSHLDSLSLSEGDRLP*SGFGSC
Trigger: ACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCC...TTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCGTGGACAGGAGAGGCTaGTCCAGGCTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCVDRRG*SRLLSF
Trigger: GAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCAC...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCTCCTGGAACCACAAAATCAAGCCAGACTaGTGTGCGGTCAGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PGDRLPCSGFGSCCSWNHKIKPD*CAVSLP
Trigger: CGGCAAGCTGACCGCACAGCAGTCTGGCTTGATTTT...GTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp TTGATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATGGGGTAATCCATGGGATGCTTCCTGGTCCTaGCGATCGGTTGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LMMGGISSEVAARWGNPWDASWS*RSVALL
Trigger: GAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATC...CCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 72 bp GTGCGGTCAGCTTGCCGCCGTGGAATGCCTTGTGTCTaGGCCATGTCCAGCCAAGGGTACAACGTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: VRSACRRGMPCV*AMSSQGYNVLV
Trigger: AACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 72 bp CGGCTGAAAATCAAGCCAGACTGCTGTGCGGTCAGCTaGCCGCCGTGGAATGCCTTGTGTCTTGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: RLKIKPDCCAVS*PPWNALCLGHV
Trigger: GACATGGCCAAGACACAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCAGTCTGGCTTGATTTTCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGCATCTTTTCGACGTCTaGAGAGGCGTGCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLHLFDV*RGVLLN
Trigger: ATTGAGGAGCACGCCTCTGCAGACGTCGAAAAGATG...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGGGTTTGGGAGCTGTTaGTCCTGGAACCACCGCTGG +
Preference number: 4 (lower is better)
Translates to: HLDSLSLSEYTTCGWARSGFGSC*SWNHRW
Trigger: CCAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCC...TGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CAACTTCAGGAGGACCATGTGACGGCTGTGGTTGTTTTCGGGGTCACTTGCAGCGGCGATCGGTTGCCTTaGTCAGGGTTTGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QLQEDHVTAVVVFGVTCSGDRLP*SGFGSC
Trigger: ACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCC...GCTGCAAGTGACCCCGAAAACAACCACAGCCGTCACATGGTCCTCCTGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp TTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGAGCTCCGATCACCCAGGTTTaGCATTGGAAGTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: FWDLASVVGDVNQPPGGAPITQV*HWKSKT
Trigger: TGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGG...AGCTCCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp GGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGCTGGCGTGGTTGACCTaGTCCCAGTCGCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GCGRRSHLDSLSLSEYTTLAWLT*SQSQSL
Trigger: TAGGGACTGCGACTGGGACCAGGTCAACCACGCCAG...CGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGAAGCTTTGTGTTGCAGTaGGGCCACAAAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ALCQVLGNDWTWVWSWEGSFVLQ*GHKAKA
Trigger: GGCCTTTGCTTTGTGGCCTCACTGCAACACAAAGCT...TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTGGGCCATTTTGGTGCTaGGAGGAGGGTGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: SKTERRGGSGRQISWVMLGPFWC*EEGAPT
Trigger: AGTTGGGGCACCCTCCTCTCAGCACCAAAATGGCCC...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGGCCTTTTCCCTTTGCTaGTTTTGCTGTGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLAFSLC*FCCDLG
Trigger: GCCAAGATCACAGCAAAATCAGCAAAGGGAAAAGGC...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp CTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGTTTCTCCCCGTTCCTTaGAAACTTGTCTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLLLEPPLAFWDLASVVGFLPVP*KLVSCH
Trigger: ATGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAA...CCCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp CACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTGATGCTTCCTGGTCCTaGCGATCGGTTGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HTLTPSLSLNIQRVGGPVDASWS*RSVALL
Trigger: GAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATC...AACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTCCTAACCCCTGGCTGTaGACAGGAGAGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKTERRGGSGRQISWVMLPNPWL*TGEAAP
Trigger: TGGAGCAGCCTCTCCTGTCCACAGCCAGGGGTTAGG...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp CGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTGGCCAGGCTGGGACAGAATCGCTTCATaGCACTACAGATGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RAVCQKPGDAGSPCWPGWDRIAS*HYRCGK
Trigger: TTTTCCACATCTGTAGTGCCATGAAGCGATTCTGTC...CCAGCCTGGCCAACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGAGAATGCCTTGTGTCTTaGCCATGTCCAGCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: ALCQVLGNDWTWVWSWEGECLVS*PCPAKG
Trigger: ACCCTTGGCTGGACATGGCCAAGACACAAGGCATTC...TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp CAACTTCAGGAGGACCATGTGACGGCTGTGGTTGTTTTCGGGGTCACTTGCAGCTGTGTGACCCCACTGTaGGAGGATTCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: QLQEDHVTAVVVFGVTCSCVTPL*EDSGCF
Trigger: GAAGCATCCAGAATCCTCTCACAGTGGGGTCACACA...GCTGCAAGTGACCCCGAAAACAACCACAGCCGTCACATGGTCCTCCTGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp TCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGGGTTTGGGAGCTGTTaGTCCTGGAACCACCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSLNIQRVGGPVQQMLQGFGSC*SWNHRW
Trigger: CCAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCC...CTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGGTTTTCGGGGTCACTTaGAGCACACACAGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQVFGVT*STHSVP
Trigger: GGGGACGCTGTGTGTGCTGCAAGTGACCCCGAAAAC...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp CCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAACTGCTCCTCTTCTGCTaGTCCGGTGTGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: PDTGCGRRSHLDSLSLSELLLFC*SGVILT
Trigger: AGTCAAAATCACACCGGACCAGCAGAAGAGGAGCAG...TTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TCCCAGTCGCAGTCCCTATGGGACAGCAGAGCTGTCAAAACAGAACCCAATGATTGCAGACCTAACCCCTaGCTGTGGACAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SQSQSLWDSRAVKTEPNDCRPNP*LWTGEA
Trigger: AGCCTCTCCTGTCCACAGCCAGGGGTTAGGTCTGCA...ATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCCATAGGGACTGCGACTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 72 bp AGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTaGACTCCCTCTCTCTCTCTGAATATACAACGTGTG +
Preference number: 4 (lower is better)
Translates to: RGLTLAVVDGHT*TPSLSLNIQRV
Trigger: CACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CAA 72 bp GTGTCTTGGCCATGTCCAGCCAAGGGTACAACGTGCTaGTTCCCGATCACCCAGGTTTGCCATTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VSWPCPAKGTTC*FPITQVCHWKS
Trigger: TGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGCTGGACATGGCCAAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp CACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCATGTAGTAGGCCGTTGTaGTCGTCCGAAACCGTTCCT +
Preference number: 4 (lower is better)
Translates to: HLDSLSLSEYTTCGWARSCSRPL*SSETVP
Trigger: AGGAACGGTTTCGGACGATCACAACGGCCTACTACA...TGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp ATGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCCACAGTCAGCTGGGCTaGGCGAGGCTCAGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: MVCHLSKTERRGGSGRQIHSQLG*ARLRVR
Trigger: CCTTACTCTGAGCCTCGCTCAGCCCAGCTGACTGTG...GATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp CACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTTTCAGGAGGACCATGTaGCGGCTGTGGTTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: HTLTPSLSLNIQRVGGPVFRRTM*RLWLFS
Trigger: CGAAAACAACCACAGCCGTCACATGGTCCTCCTGAA...AACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp ACCCCTGGCTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTAAACGATTTCTCAATTaGATTCTGGTGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPGCGQERLLQASFLLNAKRFLN*ILVAVG
Trigger: GCCCACGGCCACCAGAATGCAATTGAGAAATCGTTT...AGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATGACCGCAGACGGGCCTaGAGACCTAACCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YTTCGWARSADVTGKIANDRRRA*RPNPWL
Trigger: CAGCCAGGGGTTAGGTCTGCAGGCCCGTCTGCGGTC...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp ACCCCTGGCTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTCTCTGGACTTCACTCTaGATGCCTTTTCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: TPGCGQERLLQASFLLNALWTSL*MPFPFA
Trigger: AGCAAAGGGAAAAGGCATGCAGAGTGAAGTCCAGAG...AGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp CAACTTCAGGAGGACCATGTGACGGCTGTGGTTGTTTTCGGGGTCACTTGCAGCATGCTTCTGTCTGGTTaGCTCTGGACTTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: QLQEDHVTAVVVFGVTCSMLLSG*LWTSLC
Trigger: GCAGAGTGAAGTCCAGAGGCAACCAGACAGAAGCAT...GCTGCAAGTGACCCCGAAAACAACCACAGCCGTCACATGGTCCTCCTGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp CAACTTCAGGAGGACCATGTGACGGCTGTGGTTGTTTTCGGGGTCACTTGCAGCCGATGGGGTAATCCATaGGCTCTACCATCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QLQEDHVTAVVVFGVTCSRWGNP*ALPSCP
Trigger: TGGACAAGATGGTAGAGCCCATGGATTACCCCATCG...GCTGCAAGTGACCCCGAAAACAACCACAGCCGTCACATGGTCCTCCTGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp GGGACAGCAGAGCTGTCAAAACAGAACCCAATGATGACGGCTGAAAATCAAGCCGAGGTGGCCGCTCGATaGGGTAATCCATGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: GTAELSKQNPMMTAENQAEVAAR*GNPWAL
Trigger: TAGAGCCCATGGATTACCCCATCGAGCGGCCACCTC...GGCTTGATTTTCAGCCGTCATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGTATCTCTGGCGAGAGTaGAAAATGCATTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLYLWRE*KMHFPH
Trigger: ATGTGGAAAATGCATTTTTCACTCTCGCCAGAGATA...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp GGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGCTCCCTCTCTCTCTCTaGATATACAACGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GCGRRSHLDSLSLSEYTTLPLSL*IYNVWV
Trigger: CACCCACACGTTGTATATTCAGAGAGAGAGAGGGAG...CGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp GGCTTCTTTTCCCAATTTAGTCTTTTGATGATGGGTGGCATCTCCTCTGAGGTGGTGCTGAGAGGAGGGTaGCCCAACTTCAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: GFFSQFSLLMMGGISSEVVLRGG*PNFRRT
Trigger: GGTCCTCCTGAAGTTGGGGCACCCTCCTCTCAGCAC...CACCTCAGAGGAGATGCCACCCATCATCAAAAGACTAAATTGGGAAAAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp TCCCAGTCGCAGTCCCTATGGGACAGCAGAGCTGTCAAAACAGAACCCAATGATCAGTCGCAGTCCCTATaGGACAGCAGAGCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: SQSQSLWDSRAVKTEPNDQSQSL*DSRAVK
Trigger: TTTGACAGCTCTGCTGTCCCATAGGGACTGCGACTG...ATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCCATAGGGACTGCGACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATGTGATCAGCCCGCCTTaGCCTCCCAGAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YTTCGWARSADVTGKIANVISPP*PPRVLG
Trigger: TCCCAGCACTCTGGGAGGCCAAGGCGGGCTGATCAC...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp CACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTTCTTGGGAAGGACCCTaGATAGAGTGGAAGGAATGC +
Preference number: 4 (lower is better)
Translates to: HTLTPSLSLNIQRVGGPVSWEGP*IEWKEC
Trigger: GCATTCCTTCCACTCTATCCAGGGTCCTTCCCAAGA...AACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp TCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGACCTGGGTGTGGTCTTaGGAAGGACCCTGGATAGAG +
Preference number: 4 (lower is better)
Translates to: SLSLNIQRVGGPVQQMLQTWVWS*EGPWIE
Trigger: CTCTATCCAGGGTCCTTCCCAAGACCACACCCAGGT...CTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGCTCCCTCTCTCTCTCTaGATATACAACGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQLPLSL*IYNVWV
Trigger: CACCCACACGTTGTATATTCAGAGAGAGAGAGGGAG...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTAAGCTGCTCCTCTTCTaGTGGTCCGGTGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: SKTERRGGSGRQISWVMLKLLLF*WSGVIL
Trigger: CAAAATCACACCGGACCAGCAGAAGAGGAGCAGCTT...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGCACATCGGAAAAAGCTaGTCCTCTTCTGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: SLSLNIQRVGGPVQQMLQHIGKS*SSSAGP
Trigger: CGGACCAGCAGAAGAGGAGCAGCTTTTTCCGATGTG...CTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTGCCAAGGGTACAACGTaGTTGTTCCCGATCACCCAG +
Preference number: 4 (lower is better)
Translates to: WFVTCPKLREEVEVGAKSAKGTT*LFPITQ
Trigger: CTGGGTGATCGGGAACAAGCACGTTGTACCCTTGGC...AGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp TCCCAGTCGCAGTCCCTATGGGACAGCAGAGCTGTCAAAACAGAACCCAATGATCTGCTCCTCTTCTGCTaGTCCGGTGTGATTTTGACT +
Preference number: 4 (lower is better)
Translates to: SQSQSLWDSRAVKTEPNDLLLFC*SGVILT
Trigger: AGTCAAAATCACACCGGACCAGCAGAAGAGGAGCAG...ATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCCATAGGGACTGCGACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CCA 90 bp TCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTTATACAACGTGTGGGTaGGCCCGTTCAGCAGATGTT +
Preference number: 4 (lower is better)
Translates to: SLSLSEYTTCGWARSADVYTTCG*ARSADV
Trigger: AACATCTGCTGAACGGGCCCACCCACACGTTGTATA...AACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTTATACAACGTGTGGGTaGGCCCGTTCAGCAGATGTT +
Preference number: 4 (lower is better)
Translates to: SKTERRGGSGRQISWVMLYTTCG*ARSADV
Trigger: AACATCTGCTGAACGGGCCCACCCACACGTTGTATA...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGAATGATGCCAATGGTTTaGATTGACAGCAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: ALCQVLGNDWTWVWSWEGMMPMV*IDSSLR
Trigger: CCTTAAGCTGCTGTCAATCCAAACCATTGGCATCAT...TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp TCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGCGATCAGCAGCAGCTTaGACAGGTAATCGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SLSLNIQRVGGPVQQMLQRSAAA*TGNRRS
Trigger: AGACCTACGATTACCTGTTCAAGCTGCTGCTGATCG...CTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp TCCCAGTCGCAGTCCCTATGGGACAGCAGAGCTGTCAAAACAGAACCCAATGATGCCAATGGTTTGGATTaGCAGCAGCTTAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQSQSLWDSRAVKTEPNDANGLD*QQLKEE
Trigger: TTCCTCCTTAAGCTGCTGTCAATCCAAACCATTGGC...ATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCCATAGGGACTGCGACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTATCTATTTTCCACATTaGTGTTGGCCTTCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SKTERRGGSGRQISWVMLIYFPH*CWPSRW
Trigger: CCAGCGCGAAGGCCAACATCAATGTGGAAAATAGAT...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586682.1
CDS-3UTR GCA 90 bp TCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGAAGCTGCTCCTCTTCTaGTGGTCCGGTGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: SLSLNIQRVGGPVQQMLQKLLLF*WSGVIL
Trigger: CAAAATCACACCGGACCAGCAGAAGAGGAGCAGCTT...CTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTAAACGATTTCTCAATTaGATTCTGGTGGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SKTERRGGSGRQISWVMLKRFLN*ILVAVG
Trigger: GCCCACGGCCACCAGAATGCAATTGAGAAATCGTTT...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp CACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGGACTTCACTCTGCATaGCTTTTCCCTTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: HLDSLSLSEYTTCGWARSGLHSA*LFPLLI
Trigger: AATCAGCAAAGGGAAAAGGCATGCAGAGTGAAGTCC...TGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 72 bp CAAGGGTACAACGTGCTTGTTCCCGATCACCCAGGTTaGCCATTGGAAGTCAAAGACAGAATCGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: QGYNVLVPDHPG*PLEVKDRIASW
Trigger: CCATGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTACCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
3UTR CAA 72 bp TGCATGCCTTTTCCCTTTGCTGATTTTGCTGTGATCTaGGCTGTGAGTACAGCTCTCTGCCAAGTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: CMPFPFADFAVI*AVSTALCQVLG
Trigger: CCCTAGGACTTGGCAGAGAGCTGTACTCACAGCCAAGATCACAGCAAAATCAGCAAAGGGAAAAGGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp GGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGGCTGTGTCCCATATCTaGAGTTTAATTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GCGRRSHLDSLSLSEYTTAVSHI*SLILLP
Trigger: TGGCAAGAGAATTAAACTGCAGATATGGGACACAGC...CGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATTTCAGCATGATGCCCATTaGACCCCTGTAGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: YNVWVGPFSRCYRKNSKFQHDAH*TPVVGR
Trigger: ACGGCCTACTACAGGGGTGCAATGGGCATCATGCTG...AAATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTGGTGGAGCTTTGTGTTaGAGTGAGGCCACAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WFVTCPKLREEVEVGAKSGGALC*SEATKQ
Trigger: TTGCTTTGTGGCCTCACTGCAACACAAAGCTCCACC...AGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCTTCTTTCCTTCTCAATaGTTTACACAGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCFFPSQ*FTQDFL
Trigger: AAGGAAATCCTGTGTAAAGCATTGAGAAGGAAAGAA...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp CACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCATTTCTCCCCGTTCCTTaGAAACTTGTCTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: HLDSLSLSEYTTCGWARSFLPVP*KLVSCH
Trigger: ATGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAA...TGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATCGTGAACCAGCCTCCTaGTGGAGCTTTGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: YTTCGWARSADVTGKIANREPAS*WSFVLQ
Trigger: CTGCAACACAAAGCTCCACCAGGAGGCTGGTTCACG...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATTTGAGAAGAGGTGGAAGTaGGCGCCAAATCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YNVWVGPFSRCYRKNSKFEKRWK*APNLLG
Trigger: ACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTC...AAATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
3UTR CAA 72 bp TACAACGTGCTTGTTCCCGATCACCCAGGTTTGCCATaGGAAGTCAAAGACAGAATCGCTTCATGGCACTAC +
Preference number: 4 (lower is better)
Translates to: YNVLVPDHPGLP*EVKDRIASWHY
Trigger: GTAGTGCCATGAAGCGATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGGAACAAGCACGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp TACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATTTATGCATTTTCCACATTaGTGTTGGCCTTCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: YNVWVGPFSRCYRKNSKFMHFPH*CWPSRW
Trigger: CCAGCGCGAAGGCCAACATCAATGTGGAAAATGCAT...AAATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR TCA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATCCCAATGATGACGGCTaGAAATCAAGCCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: YTTCGWARSADVTGKIANPNDDG*KSSQTA
Trigger: AGCAGTCTGGCTTGATTTTCAGCCGTCATCATTGGG...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATCGTGCTCCTCAATGTTaGGAATCCAGTTCCGGATGT +
Preference number: 4 (lower is better)
Translates to: YTTCGWARSADVTGKIANRAPQC*ESSSGC
Trigger: ACATCCGGAACTGGATTCGCAACATTGAGGAGCACG...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTAGTGAGGGGGCAAAATaGTTTGTCACTTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: WFVTCPKLREEVEVGAKSSEGAK*FVTCPK
Trigger: TTTTGGACAAGTGACAAACCATTTTGCCCCCTCACT...AGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR GCA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTTTCTTTCCTTCTCAATaGTTTACACAGGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: SKTERRGGSGRQISWVMLFFPSQ*FTQDFL
Trigger: AAGGAAATCCTGTGTAAAGCATTGAGAAGGAAAGAA...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR TCA 90 bp ATGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCATTCAAAAGAAACGATaGTGCCAATGGTTTGGATTG +
Preference number: 4 (lower is better)
Translates to: MVCHLSKTERRGGSGRQIIQKKR*CQWFGL
Trigger: CAATCCAAACCATTGGCATCATCGTTTCTTTTGAAT...GATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR GCA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATGCTGTGTCCCATATCTaGAGTTTAATTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: YTTCGWARSADVTGKIANAVSHI*SLILLP
Trigger: TGGCAAGAGAATTAAACTGCAGATATGGGACACAGC...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CCA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATAGTGAGGGGGCAAAATaGTTTGTCACTTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: YTTCGWARSADVTGKIANSEGAK*FVTCPK
Trigger: TTTTGGACAAGTGACAAACCATTTTGCCCCCTCACT...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp CTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTTGCTGTGCGGTCAGCTaGCCGCCGTGGAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: LAFWDLASVVGDVNQPPGCCAVS*PPWNAL
Trigger: CAAGGCATTCCACGGCGGCAAGCTGACCGCACAGCA...ACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CAA 90 bp GGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGTGCCTTGCTCAGGGTTaGGGAGCTGTTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GLLGPRFRGRGREPASWWCLAQG*GAVAPG
Trigger: TCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCA...CCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp GGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGGACCTGGGTGTGGTCTaGGGAAGGACCCTGGATAGA +
Preference number: 5 (lower is better)
Translates to: GLLGPRFRGRGREPASWWDLGVV*GRTLDR
Trigger: TCTATCCAGGGTCCTTCCCAAGACCACACCCAGGTC...CCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS GCA 90 bp AACAGGCCGTGCCTGAGGTGGTCGCAACTCGAGGCCGTCACCAGCTaGAGGCACTTCACCACCCTGTCTGATGTTGCCCAAACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: NRPCLRWSQLEAVTS*RHFTTLSDVAQTLP
Trigger: GGGCAGAGTTTGGGCAACATCAGACAGGGTGGTGAAGTGCCTGCAGCTGGTGACGGCCTCGAGTTGCGACCACCTCAGGCACGGCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 90 bp GAAGACAGCTTTCCCAGCTGGGGTGCAGCCCTGCACTGGCAAATTTaGCAGCACAGCCCTCTCAGGGTCACTGGGGAGGTGAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: EDSFPSWGAALHWQI*QHSPLRVTGEVSPV
Trigger: CACTGGGCTCACCTCCCCAGTGACCCTGAGAGGGCTGTGCTGCCAAATTTGCCAGTGCAGGGCTGCACCCCAGCTGGGAAAGCTGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 90 bp AACTCTGCCCTCATACCCAAAGGCAGCTCCTTCGTCAAGTCTCCCTaGGTCCCCATGGAGCGGACCACGCTTCCTGGAGGACGGGGACAC +
Preference number: 5 (lower is better)
Translates to: NSALIPKGSSFVKSP*VPMERTTLPGGRGH
Trigger: GTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCATGGGGACCCAGGGAGACTTGACGAAGGAGCTGCCTTTGGGTATGAGGGCAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp GGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGGCGTGCTCCTCAATGTaGCGAATCCAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: GLLGPRFRGRGREPASWWACSSM*RIQFRM
Trigger: CATCCGGAACTGGATTCGCAACATTGAGGAGCACGC...CCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGGTCGACGGTCACACCTaGACTCCCTCTCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRVDGHT*TPSLSL
Trigger: CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGAC...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp CGAGCTGTGTGCCAGAAGCCAGGTGACGCAGGCTCACCATGTTGGCCAGGCTGGCCTCCTGGTGGAGCTTaGTGTTGCAGTGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: RAVCQKPGDAGSPCWPGWPPGGA*CCSEAT
Trigger: TGTGGCCTCACTGCAACACAAAGCTCCACCAGGAGG...CCAGCCTGGCCAACATGGTGAGCCTGCGTCACCTGGCTTCTGGCACACAGCTCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CAA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGTGTTTTCGGGGTCACTaGCAGCACACACAGCGTCCC +
Preference number: 5 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRCFRGH*QHTQRP
Trigger: GGGACGCTGTGTGTGCTGCAAGTGACCCCGAAAACA...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CAA 90 bp TTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGAGCTCCGCCGTGGAATGCCTaGTGTCTTGGCCATGTCCAG +
Preference number: 5 (lower is better)
Translates to: FWDLASVVGDVNQPPGGAPPWNA*CLGHVQ
Trigger: CTGGACATGGCCAAGACACAAGGCATTCCACGGCGG...AGCTCCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS CCA 90 bp GACCAGGCTCTCCTCCTCTCCACGGATGAAGACAGCTTTCCCAGCTaGGGTGCAGCCCTGCACTGGCAAATTTGGCAGCACAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: DQALLLSTDEDSFPS*GAALHWQIWQHSPL
Trigger: GAGAGGGCTGTGCTGCCAAATTTGCCAGTGCAGGGCTGCACCCCAGCTGGGAAAGCTGTCTTCATCCGTGGAGAGGAGGAGAGCCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 90 bp CTTCGTCAAGTCTCCCTGGGTCCCCATGGAGCGGACCACGCTTCCTaGAGGACGGGGACACTGGAAACTGCTGTCTTCTTCCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: LRQVSLGPHGADHAS*RTGTLETAVFFHQL
Trigger: GAGCTGGTGGAAGAAGACAGCAGTTTCCAGTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCATGGGGACCCAGGGAGACTTGACGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 90 bp TCATACCCAAAGGCAGCTCCTTCGTCAAGTCTCCCTGGGTCCCCATaGAGCGGACCACGCTTCCTGGAGGACGGGGACACTGGAAACTGC +
Preference number: 5 (lower is better)
Translates to: SYPKAAPSSSLPGSP*SGPRFLEDGDTGNC
Trigger: GCAGTTTCCAGTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCATGGGGACCCAGGGAGACTTGACGAAGGAGCTGCCTTTGGGTATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAGGGTTTGGGAGCTGTaGCTCCTGGAACCACCGCTG +
Preference number: 5 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLRVWEL*LLEPPL
Trigger: CAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCCT...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TTGATGATGGGTGGCATCTCCTCTGAGGTGGCCGCTCGATGGGGTAATCCATGGAGTGATCAGCCCGCCTaGGCCTCCCAGAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LMMGGISSEVAARWGNPWSDQPA*ASQSAG
Trigger: CCCAGCACTCTGGGAGGCCAAGGCGGGCTGATCACT...CCATGGATTACCCCATCGAGCGGCCACCTCAGAGGAGATGCCACCCATCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS CCA 90 bp TGGGTCCCCATGGAGCGGACCACGCTTCCTGGAGGACGGGGACACTaGAAACTGCTGTCTTCTTCCACCAGCTCAGACTTGGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: WVPMERTTLPGGRGH*KLLSSSTSSDLVSG
Trigger: TCCAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCATGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp CCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCTCCTGGAACCACTGCCTTGCTCAGGGTTaGGGAGCTGTTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PGDRLPCSGFGSCCSWNHCLAQG*GAVAPG
Trigger: TCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCA...GTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp GCTCTCTGCCAAGTCCTAGGGAATGACTGGACCTGGGTGTGGTCTTGGGAAGGAACACACAGCGTCCCCTaGATGCTCGATGGGGACCGC +
Preference number: 5 (lower is better)
Translates to: ALCQVLGNDWTWVWSWEGTHSVP*MLDGDR
Trigger: GCGGTCCCCATCGAGCATCAAGGGGACGCTGTGTGT...TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCCTAGGACTTGGCAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS TCA 90 bp CGGCTGAGTGAGGGGCTCACTCAGAACAGGCACAGTCAGCTGGGCTaGGCGAGGCTCAGAGTAAGGCGGTGTTCCTCACAGAAGAACACA +
Preference number: 5 (lower is better)
Translates to: RLSEGLTQNRHSQLG*ARLRVRRCSSQKNT
Trigger: TGTGTTCTTCTGTGAGGAACACCGCCTTACTCTGAGCCTCGCTCAGCCCAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTCACTCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS TCA 90 bp GCAACTCGAGGCCGTCACCAGCTGCAGGCACTTCACCACCCTGTCTaGTGTTGCCCAAACTCTGCCCTCATACCCAAAGGCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ATRGRHQLQALHHPV*CCPNSALIPKGSSF
Trigger: GAAGGAGCTGCCTTTGGGTATGAGGGCAGAGTTTGGGCAACATCAGACAGGGTGGTGAAGTGCCTGCAGCTGGTGACGGCCTCGAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 90 bp TGCGCCACTCCCTGCCTCACTTCCCATGAACCAGAAGGTGGCTCCTaGCCGCTGGCCAGAAACAGAGACCTTTCACAAAGACCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: CATPCLTSHEPEGGS*PLARNRDLSQRPGS
Trigger: AGAGCCTGGTCTTTGTGAAAGGTCTCTGTTTCTGGCCAGCGGGCAGGAGCCACCTTCTGGTTCATGGGAAGTGAGGCAGGGAGTGGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 90 bp CTGGCCCTGACATTTCAACTATTTTTGGGCTCCAGAAACAGGCCGTaGCTGAGGTGGTCGCAACTCGAGGCCGTCACCAGCTGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: LALTFQLFLGSRNRP*LRWSQLEAVTSCRH
Trigger: GTGCCTGCAGCTGGTGACGGCCTCGAGTTGCGACCACCTCAGGCACGGCCTGTTTCTGGAGCCCAAAAATAGTTGAAATGTCAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp CCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAAATGGGCTCTACCATCTaGTCCAGACCCACCCCCAGC +
Preference number: 5 (lower is better)
Translates to: PDTGCGRRSHLDSLSLSEMGSTI*SRPTPS
Trigger: GCTGGGGGTGGGTCTGGACAAGATGGTAGAGCCCAT...TTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS GCA 90 bp CCATGGAGCGGACCACGCTTCCTGGAGGACGGGGACACTGGAAACTaGTGTCTTCTTCCACCAGCTCAGACTTGGTCTCTGGAACCTACT +
Preference number: 5 (lower is better)
Translates to: PWSGPRFLEDGDTGN*CLLPPAQTWSLEPT
Trigger: AGTAGGTTCCAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 90 bp CCAGCTGCAGGCACTTCACCACCCTGTCTGATGTTGCCCAAACTCTaGCCTCATACCCAAAGGCAGCTCCTTCGTCAAGTCTCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: PAAGTSPPCLMLPKL*PHTQRQLLRQVSLG
Trigger: ACCCAGGGAGACTTGACGAAGGAGCTGCCTTTGGGTATGAGGGCAGAGTTTGGGCAACATCAGACAGGGTGGTGAAGTGCCTGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 90 bp CAGTGCAATGACTCACAAATGATGGGGTGGCCTCTCGGCCTGGCCTaGGAGGTCCATGAGTCCTGGGTGGACAGTGATATGCCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: QCNDSQMMGWPLGLA*EVHESWVDSDMPFC
Trigger: GCAAAAGGGCATATCACTGTCCACCCAGGACTCATGGACCTCCCAGGCCAGGCCGAGAGGCCACCCCATCATTTGTGAGTCATTGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 90 bp GACGGGGACACTGGAAACTGCTGTCTTCTTCCACCAGCTCAGACTTaGTCTCTGGAACCTACTGCGCCACTCCCTGCCTCACTTCCCATG +
Preference number: 5 (lower is better)
Translates to: DGDTGNCCLLPPAQT*SLEPTAPLPASLPM
Trigger: CATGGGAAGTGAGGCAGGGAGTGGCGCAGTAGGTTCCAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGTGTCCCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp GGCCTTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGTGCAGTTTAATTCTCTaGCCATCGAGCTCTATGGTC +
Preference number: 5 (lower is better)
Translates to: GLLGPRFRGRGREPASWWCSLIL*PSSSMV
Trigger: GACCATAGAGCTCGATGGCAAGAGAATTAAACTGCA...CCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp CCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCTCCTGGAACCACTTTTCCACATTGATGTaGGCCTTCGCGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PGDRLPCSGFGSCCSWNHFSTLM*AFALVS
Trigger: GGAGACCAGCGCGAAGGCCAACATCAATGTGGAAAA...GTGGTTCCAGGAGCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp AGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCCCGATCACCCAGGTTaGCCATTGGAAGTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: RGRGLTLAVVDGHTLTPSPDHPG*PLEVKD
Trigger: GTCTTTGACTTCCAATGGCAAACCTGGGTGATCGGG...AGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CAA 90 bp AGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTAAGGGTACAACGTGCTaGTTCCCGATCACCCAGGTT +
Preference number: 5 (lower is better)
Translates to: RGRGLTLAVVDGHTLTPSKGTTC*FPITQV
Trigger: AACCTGGGTGATCGGGAACAAGCACGTTGTACCCTT...AGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS CCA 90 bp ACATTTCAACTATTTTTGGGCTCCAGAAACAGGCCGTGCCTGAGGTaGTCGCAACTCGAGGCCGTCACCAGCTGCAGGCACTTCACCACC +
Preference number: 5 (lower is better)
Translates to: TFQLFLGSRNRPCLR*SQLEAVTSCRHFTT
Trigger: GGTGGTGAAGTGCCTGCAGCTGGTGACGGCCTCGAGTTGCGACCACCTCAGGCACGGCCTGTTTCTGGAGCCCAAAAATAGTTGAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCTTTTCCACATTGATGTaGGCCTTCGCGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCFSTLM*AFALVS
Trigger: GGAGACCAGCGCGAAGGCCAACATCAATGTGGAAAA...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp CACCTTGACTCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAAGGGTTTGGGAGCTGTaGCTCCTGGAACCACCGCTG +
Preference number: 5 (lower is better)
Translates to: HLDSLSLSEYTTCGWARSRVWEL*LLEPPL
Trigger: CAGCGGTGGTTCCAGGAGCAACAGCTCCCAAACCCT...TGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTGGTCCTGGCGATCGGTaGCCTTGCTCAGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: SKTERRGGSGRQISWVMLGPGDR*PCSGFG
Trigger: CCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACC...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS TCA 90 bp GCAGGAATGGTGTGGGTTAGAGTCCCGGCTCCAAGGTGCATTAGCTaGGCTTGTCATCAGCTGGGAGTGTGCAGTGGCATCTCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: AGMVWVRVPAPRCIS*ACHQLGVCSGISLG
Trigger: TCCTAGAGAGATGCCACTGCACACTCCCAGCTGATGACAAGCTCAGCTAATGCACCTTGGAGCCGGGACTCTAACCCACACCATTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588105.1
CDS-3UTR CAA 90 bp TTCTGGGACCTCGCTTCCGTGGTAGGGGACGTGAACCAGCCTCCTGGTGGAGCTTTTTCTCCCCGTTCCTaGGAAACTTGTCTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FWDLASVVGDVNQPPGGAFSPRS*ETCLLS
Trigger: TGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAAA...AGCTCCACCAGGAGGCTGGTTCACGTCCCCTACCACGGAAGCGAGGTCCCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTTGGCGATCGGTTGCCTaGCTCAGGGTTTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SLSLSEYTTCGWARSADVWRSVA*LRVWEL
Trigger: CAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCA...AACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGTGGCGATCGGTTGCCTaGCTCAGGGTTTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQWRSVA*LRVWEL
Trigger: CAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCA...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGGTCCTGGCGATCGGTaGCCTTGCTCAGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: SLSLNIQRVGGPVQQMLQGPGDR*PCSGFG
Trigger: CCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACC...CTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp AGAGGCAGAGGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCACCCAGGTTTGCCATaGGAAGTCAAAGACAGAATC +
Preference number: 5 (lower is better)
Translates to: RGRGLTLAVVDGHTLTPSHPGLP*EVKDRI
Trigger: GATTCTGTCTTTGACTTCCAATGGCAAACCTGGGTG...AGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCCTCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS GCA 90 bp CAGGTCACACCCTGCTCCGATATAGCTCAAAGTACAACTGACGCCTaGTCACCACACCCTCCAACTACAAGGGTCACACCTGTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: QVTPCSDIAQSTTDA*SPHPPTTRVTPVLD
Trigger: GTCTAGCACAGGTGTGACCCTTGTAGTTGGAGGGTGTGGTGAGCAGGCGTCAGTTGTACTTTGAGCTATATCGGAGCAGGGTGTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp GGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAATATACAACGGCGTGCTCCTCAATGTaGCGAATCCAGTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: GCGRRSHLDSLSLSEYTTACSSM*RIQFRM
Trigger: CATCCGGAACTGGATTCGCAACATTGAGGAGCACGC...CGTTGTATATTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp GCTGTTGCTCCTGGAACCACCGCTGGCCTTCTGGGACCTCGCTTCCGTGGTAGGTCATTCACATCACACTaGTTCCCGAGTATCATCTTT +
Preference number: 5 (lower is better)
Translates to: AVAPGTTAGLLGPRFRGRSFTSH*FPSIIF
Trigger: AAAGATGATACTCGGGAACAAGTGTGATGTGAATGA...CCTACCACGGAAGCGAGGTCCCAGAAGGCCAGCGGTGGTTCCAGGAGCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGTGGTCCGGTGTGATTTaGACTCCCTGGTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQWSGVI*TPWLLP
Trigger: GGGGAGCAACCAGGGAGTCAAAATCACACCGGACCA...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TCCCTCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTCCTCCTGGTGGAGCTTaGTGTTGCAGTGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: SLSLSEYTTCGWARSADVPPGGA*CCSEAT
Trigger: TGTGGCCTCACTGCAACACAAAGCTCCACCAGGAGG...AACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp CAACTTCAGGAGGACCATGTGACGGCTGTGGTTGTTTTCGGGGTCACTTGCAGCGAAAGAACGTCCGATTaGGAGATAGCGGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: QLQEDHVTAVVVFGVTCSERTSD*EIAGGH
Trigger: GTGTCCTCCCGCTATCTCCAAATCGGACGTTCTTTC...GCTGCAAGTGACCCCGAAAACAACCACAGCCGTCACATGGTCCTCCTGAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CAA 90 bp GGCCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGTATCTATTTTCCACATaGATGTTGGCCTTCGCGCTG +
Preference number: 5 (lower is better)
Translates to: GLTLAVVDGHTLTPSLSLYLFST*MLAFAL
Trigger: CAGCGCGAAGGCCAACATCAATGTGGAAAATAGATA...CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586682.1
CDS-3UTR CAA 90 bp ATGCTTCCTGGTCCTGGCGATCGGTTGCCTTGCTCAGGGTTTGGGAGCTGTTGCTCCCAATTTAGTCTTTaGATGATGGGTGGCATCTCC +
Preference number: 5 (lower is better)
Translates to: MLPGPGDRLPCSGFGSCCSQFSL*MMGGIS
Trigger: GGAGATGCCACCCATCATCAAAAGACTAAATTGGGA...GCAACAGCTCCCAAACCCTGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS TCA 90 bp TTTGTACCAGGTCACACCCTGCTCCGATATAGCTCAAAGTACAACTaGCGCCTGCTCACCACACCCTCCAACTACAAGGGTCACACCTGT +
Preference number: 5 (lower is better)
Translates to: FVPGHTLLRYSSKYN*RLLTTPSNYKGHTC
Trigger: ACAGGTGTGACCCTTGTAGTTGGAGGGTGTGGTGAGCAGGCGTCAGTTGTACTTTGAGCTATATCGGAGCAGGGTGTGACCTGGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp CCTGACACTGGCTGTGGTCGACGGTCACACCTTGACTCCCTCTCTCTCTCTGAATGCAGTTTAATTCTCTaGCCATCGAGCTCTATGGTC +
Preference number: 5 (lower is better)
Translates to: PDTGCGRRSHLDSLSLSECSLIL*PSSSMV
Trigger: GACCATAGAGCTCGATGGCAAGAGAATTAAACTGCA...TTCAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGACCACAGCCAGTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTTGGTCCGGTGTGATTTaGACTCCCTGGTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: WFVTCPKLREEVEVGAKSWSGVI*TPWLLP
Trigger: GGGGAGCAACCAGGGAGTCAAAATCACACCGGACCA...AGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp ATGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCGGAATGCCTTGTGTCTaGGCCATGTCCAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: MVCHLSKTERRGGSGRQIGMPCV*AMSSQG
Trigger: CCCTTGGCTGGACATGGCCAAGACACAAGGCATTCC...GATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS GCA 90 bp ATGGTTCAAGGTCTGAACACAGGTCGTTTGTACCAGGTCACACCCTaGTCCGATATAGCTCAAAGTACAACTGACGCCTGCTCACCACAC +
Preference number: 5 (lower is better)
Translates to: MVQGLNTGRLYQVTP*SDIAQSTTDACSPH
Trigger: GTGTGGTGAGCAGGCGTCAGTTGTACTTTGAGCTATATCGGAGCAGGGTGTGACCTGGTACAAACGACCTGTGTTCAGACCTTGAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS-3UTR CAA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGATCCAGTTCCGGATGTaGTCGAAGGACTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQIQFRM*SKDFSL
Trigger: CAACGAGAAGTCCTTCGACAACATCCGGAACTGGAT...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATTTGTCGACGGTCACACCTaGACTCCCTCTCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: YNVWVGPFSRCYRKNSKFVDGHT*TPSLSL
Trigger: CAGAGAGAGAGAGGGAGTCAAGGTGTGACCGTCGAC...AAATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS TCA 90 bp GTGCAGTGGCATCTCTCTAGGAGAGCTAAGCCTCGAGTTTTGGGTTaGGACACAGCCAGGTTCAAATTCCATCAAATCCCATTCTCACCA +
Preference number: 5 (lower is better)
Translates to: VQWHLSRRAKPRVLG*DTARFKFHQIPFSP
Trigger: TGGTGAGAATGGGATTTGATGGAATTTGAACCTGGCTGTGTCTCAACCCAAAACTCGAGGCTTAGCTCTCCTAGAGAGATGCCACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588105.1
CDS CCA 90 bp GGAGTGTGCAGTGGCATCTCTCTAGGAGAGCTAAGCCTCGAGTTTTaGGTTGAGACACAGCCAGGTTCAAATTCCATCAAATCCCATTCT +
Preference number: 5 (lower is better)
Translates to: GVCSGISLGELSLEF*VETQPGSNSIKSHS
Trigger: AGAATGGGATTTGATGGAATTTGAACCTGGCTGTGTCTCAACCCAAAACTCGAGGCTTAGCTCTCCTAGAGAGATGCCACTGCACACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588105.1
CDS-3UTR CAA 90 bp CTGTGGACAGGAGAGGCTGCTCCAGGCTTCTTTCCTTCTCAATGCTTTACACAGTCATTCACATCACACTaGTTCCCGAGTATCATCTTT +
Preference number: 5 (lower is better)
Translates to: LWTGEAAPGFFPSQCFTQSFTSH*FPSIIF
Trigger: AAAGATGATACTCGGGAACAAGTGTGATGTGAATGA...CTGTGTAAAGCATTGAGAAGGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTCCTGGGTGATGCTTTTGGAAACTTGTCTCTaGTCATTCACATCACACTTG +
Preference number: 5 (lower is better)
Translates to: SKTERRGGSGRQISWVMLLETCL*SFTSHL
Trigger: CAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAA...AAGCATCACCCAGGAGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp TGGTTTGTCACTTGTCCAAAACTGAGAGAAGAGGTGGAAGTGGGCGCCAAATCTTTTTCTCCCCGTTCCTaGGAAACTTGTCTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: WFVTCPKLREEVEVGAKSFSPRS*ETCLLS
Trigger: TGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAAA...AGATTTGGCGCCCACTTCCACCTCTTCTCTCAGTTTTGGACAAGTGACAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp GGGACAGCAGAGCTGTCAAAACAGAACCCAATGATGACGGCTGAAAATCAAGCCTTGTCCATTTTTGCTTaGATATCTCTGGCGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GTAELSKQNPMMTAENQALSIFA*ISLARV
Trigger: CACTCTCGCCAGAGATATCAAAGCAAAAATGGACAA...GGCTTGATTTTCAGCCGTCATCATTGGGTTCTGTTTTGACAGCTCTGCTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CAA 90 bp TCTCTCTCTCTGAATATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGTTGGAAACTTGTCTCTaGTCATTCACATCACACTTG +
Preference number: 5 (lower is better)
Translates to: SLSLNIQRVGGPVQQMLQLETCL*SFTSHL
Trigger: CAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAA...CTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATATTCAGAGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS-3UTR CAA 90 bp GGCTTCTTTTCCCAATTTAGTCTTTTGATGATGGGTGGCATCTCCTCTGAGGTGAAAATGGTTTGTCACTaGTCCAAAACTGAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: GFFSQFSLLMMGGISSEVKMVCH*SKTERR
Trigger: TCTTCTCTCAGTTTTGGACAAGTGACAAACCATTTT...CACCTCAGAGGAGATGCCACCCATCATCAAAAGACTAAATTGGGAAAAGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300935.8
CDS-3UTR CAA 90 bp TATACAACGTGTGGGTGGGCCCGTTCAGCAGATGTTACAGGAAAAATAGCAAATAAAATGGTTTGTCACTaGTCCAAAACTGAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: YTTCGWARSADVTGKIANKMVCH*SKTERR
Trigger: TCTTCTCTCAGTTTTGGACAAGTGACAAACCATTTT...ATTTGCTATTTTTCCTGTAACATCTGCTGAACGGGCCCACCCACACGTTGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS CCA 72 bp GGGCTCCGGGGTGGGGCCAGGCCAGTGTGTGGTCCCTaGGGCCGGCTGCTTGCATCTCAGTCCCTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: GLRGGARPVCGP*GRLLASQSLLP
Trigger: TGGGAGCAGGGACTGAGATGCAAGCAGCCGGCCCCAGGGACCACACACTGGCCTGGCCCCACCCCGGAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp GTGGGGCCAGGCCAGTGTGTGGTCCCTGGGGCCGGCTaGTTGCATCTCAGTCCCTGCTCCCACCATGTCCCT +
Preference number: 6 (lower is better)
Translates to: VGPGQCVVPGAG*LHLSPCSHHVP
Trigger: AGGGACATGGTGGGAGCAGGGACTGAGATGCAAGCAGCCGGCCCCAGGGACCACACACTGGCCTGGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp GGCCAGGCCAGTGTGTGGTCCCTGGGGCCGGCTGCTTaGATCTCAGTCCCTGCTCCCACCATGTCCCTGACT +
Preference number: 6 (lower is better)
Translates to: GQASVWSLGPAA*ISVPAPTMSLT
Trigger: AGTCAGGGACATGGTGGGAGCAGGGACTGAGATGCAAGCAGCCGGCCCCAGGGACCACACACTGGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS TCA 72 bp CACTGGGGAGGTGAGCCCAGTGCAATGACTCACAAATaGTGGGGTGGCCTCTCGGCCTGGCCTGGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: HWGGEPSAMTHK*WGGLSAWPGRS
Trigger: GGACCTCCCAGGCCAGGCCGAGAGGCCACCCCATCATTTGTGAGTCATTGCACTGGGCTCACCTCCCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp AAGGCAGCTCCTTCGTCAAGTCTCCCTGGGTCCCCATaGAGCGGACCACGCTTCCTGGAGGACGGGGACACT +
Preference number: 6 (lower is better)
Translates to: KAAPSSSLPGSP*SGPRFLEDGDT
Trigger: AGTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCATGGGGACCCAGGGAGACTTGACGAAGGAGCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp TTTCCCAGCTGGGGTGCAGCCCTGCACTGGCAAATTTaGCAGCACAGCCCTCTCAGGGTCACTGGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: FPSWGAALHWQI*QHSPLRVTGEV
Trigger: CACCTCCCCAGTGACCCTGAGAGGGCTGTGCTGCCAAATTTGCCAGTGCAGGGCTGCACCCCAGCTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp GTCTCCCTGGGTCCCCATGGAGCGGACCACGCTTCCTaGAGGACGGGGACACTGGAAACTGCTGTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VSLGPHGADHAS*RTGTLETAVFF
Trigger: GAAGAAGACAGCAGTTTCCAGTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCATGGGGACCCAGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS TCA 72 bp GAGGGGCTCACTCAGAACAGGCACAGTCAGCTGGGCTaGGCGAGGCTCAGAGTAAGGCGGTGTTCCTCACAG +
Preference number: 6 (lower is better)
Translates to: EGLTQNRHSQLG*ARLRVRRCSSQ
Trigger: CTGTGAGGAACACCGCCTTACTCTGAGCCTCGCTCAGCCCAGCTGACTGTGCCTGTTCTGAGTGAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS GCA 72 bp CGGATGAAGACAGCTTTCCCAGCTGGGGTGCAGCCCTaGACTGGCAAATTTGGCAGCACAGCCCTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: RMKTAFPAGVQP*TGKFGSTALSG
Trigger: CCCTGAGAGGGCTGTGCTGCCAAATTTGCCAGTGCAGGGCTGCACCCCAGCTGGGAAAGCTGTCTTCATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp TGCCTGAGGTGGTCGCAACTCGAGGCCGTCACCAGCTaGAGGCACTTCACCACCCTGTCTGATGTTGCCCAA +
Preference number: 6 (lower is better)
Translates to: CLRWSQLEAVTS*RHFTTLSDVAQ
Trigger: TTGGGCAACATCAGACAGGGTGGTGAAGTGCCTGCAGCTGGTGACGGCCTCGAGTTGCGACCACCTCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp GTCCCTGCTCCCACCATGTCCCTGACTAGGAGGCTGTaGGCAAGTGGCCTGTATGTGTCTCTGCACCTTGGC +
Preference number: 6 (lower is better)
Translates to: VPAPTMSLTRRL*ASGLYVSLHLG
Trigger: GCCAAGGTGCAGAGACACATACAGGCCACTTGCCCACAGCCTCCTAGTCAGGGACATGGTGGGAGCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp CTCATACCCAAAGGCAGCTCCTTCGTCAAGTCTCCCTaGGTCCCCATGGAGCGGACCACGCTTCCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: LIPKGSSFVKSP*VPMERTTLPGG
Trigger: TCCTCCAGGAAGCGTGGTCCGCTCCATGGGGACCCAGGGAGACTTGACGAAGGAGCTGCCTTTGGGTATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp CTATTTTTGGGCTCCAGAAACAGGCCGTGCCTGAGGTaGTCGCAACTCGAGGCCGTCACCAGCTGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: LFLGSRNRPCLR*SQLEAVTSCRH
Trigger: GTGCCTGCAGCTGGTGACGGCCTCGAGTTGCGACCACCTCAGGCACGGCCTGTTTCTGGAGCCCAAAAATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 72 bp GTAGGCCGGGGCACAAAGCCTGTTCCTAAGACTAACTaGGGACCAAGGAGCCCTGAGGAGTTGGGGCACGGG +
Preference number: 6 (lower is better)
Translates to: VGRGTKPVPKTN*GPRSPEELGHG
Trigger: CCCGTGCCCCAACTCCTCAGGGCTCCTTGGTCCCAAGTTAGTCTTAGGAACAGGCTTTGTGCCCCGGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590899.5
CDS TCA 72 bp GGCCGTCACCAGCTGCAGGCACTTCACCACCCTGTCTaGTGTTGCCCAAACTCTGCCCTCATACCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: GRHQLQALHHPV*CCPNSALIPKG
Trigger: GCCTTTGGGTATGAGGGCAGAGTTTGGGCAACATCAGACAGGGTGGTGAAGTGCCTGCAGCTGGTGACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp CTCCTCCTCTCCACGGATGAAGACAGCTTTCCCAGCTaGGGTGCAGCCCTGCACTGGCAAATTTGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: LLLSTDEDSFPS*GAALHWQIWQH
Trigger: GTGCTGCCAAATTTGCCAGTGCAGGGCTGCACCCCAGCTGGGAAAGCTGTCTTCATCCGTGGAGAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 90 bp GGACGGGGACACTGGAAACTGCTGTCTTCTTCCACCAGCTCAGACTaGGTCTCTGGAACCTACTGCGCCACTCCCTGCCTCACTTCCCAT +
Preference number: 6 (lower is better)
Translates to: GRGHWKLLSSSTSSD*VSGTYCATPCLTSH
Trigger: ATGGGAAGTGAGGCAGGGAGTGGCGCAGTAGGTTCCAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGTGTCCCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 90 bp TCGAGGCCGTCACCAGCTGCAGGCACTTCACCACCCTGTCTGATGTaGCCCAAACTCTGCCCTCATACCCAAAGGCAGCTCCTTCGTCAA +
Preference number: 6 (lower is better)
Translates to: SRPSPAAGTSPPCLM*PKLCPHTQRQLLRQ
Trigger: TTGACGAAGGAGCTGCCTTTGGGTATGAGGGCAGAGTTTGGGCAACATCAGACAGGGTGGTGAAGTGCCTGCAGCTGGTGACGGCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp TCAGACTTGGTCTCTGGAACCTACTGCGCCACTCCCTaGCTCACTTCCCATGAACCAGAAGGTGGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SDLVSGTYCATP*LTSHEPEGGSC
Trigger: GCAGGAGCCACCTTCTGGTTCATGGGAAGTGAGGCAGGGAGTGGCGCAGTAGGTTCCAGAGACCAAGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp GGACCACGCTTCCTGGAGGACGGGGACACTGGAAACTaGTGTCTTCTTCCACCAGCTCAGACTTGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: GPRFLEDGDTGN*CLLPPAQTWSL
Trigger: CAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGTGTCCCCGTCCTCCAGGAAGCGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp ATGGAGCGGACCACGCTTCCTGGAGGACGGGGACACTaGAAACTGCTGTCTTCTTCCACCAGCTCAGACTTG +
Preference number: 6 (lower is better)
Translates to: MERTTLPGGRGH*KLLSSSTSSDL
Trigger: CAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGTGTCCCCGTCCTCCAGGAAGCGTGGTCCGCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 72 bp CAGTGGGAGGAGCCGGAGGGCCTCACCTCCTCAATGTaGCGAATCCAGTTCCGGATGTTGTCGAAGGACTTC +
Preference number: 6 (lower is better)
Translates to: QWEEPEGLTSSM*RIQFRMLSKDF
Trigger: GAAGTCCTTCGACAACATCCGGAACTGGATTCGCAACATTGAGGAGGTGAGGCCCTCCGGCTCCTCCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS TCA 72 bp TTCAACTATTTTTGGGCTCCAGAAACAGGCCGTGCCTaGGGTGGTCGCAACTCGAGGCCGTCACCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: FNYFWAPETGRA*GGRNSRPSPAA
Trigger: TGCAGCTGGTGACGGCCTCGAGTTGCGACCACCTCAGGCACGGCCTGTTTCTGGAGCCCAAAAATAGTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS TCA 72 bp GTGTGGGTTAGAGTCCCGGCTCCAAGGTGCATTAGCTaGGCTTGTCATCAGCTGGGAGTGTGCAGTGGCATC +
Preference number: 6 (lower is better)
Translates to: VWVRVPAPRCIS*ACHQLGVCSGI
Trigger: GATGCCACTGCACACTCCCAGCTGATGACAAGCTCAGCTAATGCACCTTGGAGCCGGGACTCTAACCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588105.1
CDS GCA 72 bp CCCTGCCTCACTTCCCATGAACCAGAAGGTGGCTCCTaGCCGCTGGCCAGAAACAGAGACCTTTCACAAAGA +
Preference number: 6 (lower is better)
Translates to: PCLTSHEPEGGS*PLARNRDLSQR
Trigger: TCTTTGTGAAAGGTCTCTGTTTCTGGCCAGCGGGCAGGAGCCACCTTCTGGTTCATGGGAAGTGAGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp ACTGCTGTCTTCTTCCACCAGCTCAGACTTGGTCTCTaGAACCTACTGCGCCACTCCCTGCCTCACTTCCCA +
Preference number: 6 (lower is better)
Translates to: TAVFFHQLRLGL*NLLRHSLPHFP
Trigger: TGGGAAGTGAGGCAGGGAGTGGCGCAGTAGGTTCCAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 72 bp CACTGGAAACTGCTGTCTTCTTCCACCAGCTCAGACTaGGTCTCTGGAACCTACTGCGCCACTCCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: HWKLLSSSTSSD*VSGTYCATPCL
Trigger: GAGGCAGGGAGTGGCGCAGTAGGTTCCAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 72 bp AAGCCACCTCGCCTGGCCCTGACATTTCAACTATTTTaGGGCTCCAGAAACAGGCCGTGCCTGAGGTGGTCG +
Preference number: 6 (lower is better)
Translates to: KPPRLALTFQLF*GSRNRPCLRWS
Trigger: CGACCACCTCAGGCACGGCCTGTTTCTGGAGCCCAAAAATAGTTGAAATGTCAGGGCCAGGCGAGGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp GGCACTTCACCACCCTGTCTGATGTTGCCCAAACTCTaGCCTCATACCCAAAGGCAGCTCCTTCGTCAAGTC +
Preference number: 6 (lower is better)
Translates to: GTSPPCLMLPKL*PHTQRQLLRQV
Trigger: GACTTGACGAAGGAGCTGCCTTTGGGTATGAGGGCAGAGTTTGGGCAACATCAGACAGGGTGGTGAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp ACATTTCAACTATTTTTGGGCTCCAGAAACAGGCCGTaGCTGAGGTGGTCGCAACTCGAGGCCGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: TFQLFLGSRNRP*LRWSQLEAVTS
Trigger: GCTGGTGACGGCCTCGAGTTGCGACCACCTCAGGCACGGCCTGTTTCTGGAGCCCAAAAATAGTTGAAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp TCGGGGCATGCCGGCTTTAACTGCACTGAGCTCACCTaGAAGAACCGGCTTCCTGTGTCTTTCTTCATTCCC +
Preference number: 6 (lower is better)
Translates to: SGHAGFNCTELT*KNRLPVSFFIP
Trigger: GGGAATGAAGAAAGACACAGGAAGCCGGTTCTTCCAGGTGAGCTCAGTGCAGTTAAAGCCGGCATGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590899.5
CDS CCA 72 bp ACTGGAAACTGCTGTCTTCTTCCACCAGCTCAGACTTaGTCTCTGGAACCTACTGCGCCACTCCCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: TGNCCLLPPAQT*SLEPTAPLPAS
Trigger: TGAGGCAGGGAGTGGCGCAGTAGGTTCCAGAGACCAAGTCTGAGCTGGTGGAAGAAGACAGCAGTTTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS TCA 72 bp GGTCACACCCTGCTCCGATATAGCTCAAAGTACAACTaGCGCCTGCTCACCACACCCTCCAACTACAAGGGT +
Preference number: 6 (lower is better)
Translates to: GHTLLRYSSKYN*RLLTTPSNYKG
Trigger: ACCCTTGTAGTTGGAGGGTGTGGTGAGCAGGCGTCAGTTGTACTTTGAGCTATATCGGAGCAGGGTGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp CCCTGCTCCGATATAGCTCAAAGTACAACTGACGCCTaGTCACCACACCCTCCAACTACAAGGGTCACACCT +
Preference number: 6 (lower is better)
Translates to: PCSDIAQSTTDA*SPHPPTTRVTP
Trigger: AGGTGTGACCCTTGTAGTTGGAGGGTGTGGTGAGCAGGCGTCAGTTGTACTTTGAGCTATATCGGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp GGTCTGAACACAGGTCGTTTGTACCAGGTCACACCCTaGTCCGATATAGCTCAAAGTACAACTGACGCCTGC +
Preference number: 6 (lower is better)
Translates to: GLNTGRLYQVTP*SDIAQSTTDAC
Trigger: GCAGGCGTCAGTTGTACTTTGAGCTATATCGGAGCAGGGTGTGACCTGGTACAAACGACCTGTGTTCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp AGAAGAACACATCGGAAAAAGCTGCTCCTCTTCTGCTaGTCCGGTGTGATTTTGACTCCCTGGTTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: RRTHRKKLLLFC*SGVILTPWLLP
Trigger: GGGGAGCAACCAGGGAGTCAAAATCACACCGGACCAGCAGAAGAGGAGCAGCTTTTTCCGATGTGTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300935.8
ENST00000586682.1
ENST00000592971.1
CDS TCA 72 bp GTTGGCCTACTTCTCACTGCTCTATGGTTCAAGGTCTaGACACAGGTCGTTTGTACCAGGTCACACCCTGCT +
Preference number: 6 (lower is better)
Translates to: VGLLLTALWFKV*TQVVCTRSHPA
Trigger: AGCAGGGTGTGACCTGGTACAAACGACCTGTGTTCAGACCTTGAACCATAGAGCAGTGAGAAGTAGGCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS GCA 72 bp CACAGAAGAACACATCGGAAAAAGCTGCTCCTCTTCTaGTGGTCCGGTGTGATTTTGACTCCCTGGTTGCTC +
Preference number: 6 (lower is better)
Translates to: HRRTHRKKLLLF*WSGVILTPWLL
Trigger: GAGCAACCAGGGAGTCAAAATCACACCGGACCAGCAGAAGAGGAGCAGCTTTTTCCGATGTGTTCTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300935.8
ENST00000586682.1
ENST00000592971.1
CDS CAA 90 bp TCTCCCCGTTCCTTGGAAACTTGTCTCTTGTCATTCACATCACACTaGTTCCCGAGTATCATCTTTTCGACGTCTGCAGAGGCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SPRSLETCLLSFTSH*FPSIIFSTSAEACS
Trigger: GGAGCACGCCTCTGCAGACGTCGAAAAGATGATACTCGGGAACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGGAACGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300935.8
ENST00000586682.1
ENST00000587156.5
CDS CAA 72 bp CACTGCTCTATGGTTCAAGGTCTGAACACAGGTCGTTaGTACCAGGTCACACCCTGCTCCGATATAGCTCAA +
Preference number: 6 (lower is better)
Translates to: HCSMVQGLNTGR*YQVTPCSDIAQ
Trigger: TTGAGCTATATCGGAGCAGGGTGTGACCTGGTACAAACGACCTGTGTTCAGACCTTGAACCATAGAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 72 bp CCTTGTGCCACCATGCCCACCTTTTCTCCCCGTTCCTaGGAAACTTGTCTCTTGTCATTCACATCACACTTG +
Preference number: 6 (lower is better)
Translates to: PCATMPTFSPRS*ETCLLSFTSHL
Trigger: CAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAAAGGTGGGCATGGTGGCACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587156.5
CDS TCA 72 bp ATAGATGGGAAAAGTTCTCTGGCTGTGCCTCAGACCTaGAGCCCCACATGGTTAGTTATAGAAAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: IDGKSSLAVPQT*SPTWLVIESCR
Trigger: CCTGCAGCTTTCTATAACTAACCATGTGGGGCTTCAGGTCTGAGGCACAGCCAGAGAACTTTTCCCATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CCA 72 bp CTTGTGCCACCATGCCCACCTTTTCTCCCCGTTCCTTaGAAACTTGTCTCTTGTCATTCACATCACACTTGT +
Preference number: 6 (lower is better)
Translates to: LVPPCPPFLPVP*KLVSCHSHHTC
Trigger: ACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAAAGGTGGGCATGGTGGCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587156.5
CDS CAA 90 bp CCTACTTCTCACTGCTCTATGGTTCAAGGTCTGAACACAGGTCGTTaGTACCAGGTCACACCCTGCTCCGATATAGCTCAAAGTACAACT +
Preference number: 6 (lower is better)
Translates to: PTSHCSMVQGLNTGR*YQVTPCSDIAQSTT
Trigger: AGTTGTACTTTGAGCTATATCGGAGCAGGGTGTGACCTGGTACAAACGACCTGTGTTCAGACCTTGAACCATAGAGCAGTGAGAAGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS CAA 90 bp CCTTCCTTCTCTAGAAAGCACCCAACACTCATGGTGACCACAAGCTaGGATATCCTTTCTCTTATAACCATGACACTGGCCAGATCCAAC +
Preference number: 6 (lower is better)
Translates to: PSFSRKHPTLMVTTS*DILSLITMTLARSN
Trigger: GTTGGATCTGGCCAGTGTCATGGTTATAAGAGAAAGGATATCCAAGCTTGTGGTCACCATGAGTGTTGGGTGCTTTCTAGAGAAGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589697.1
CDS TCA 72 bp CATCTCTCTAGGAGAGCTAAGCCTCGAGTTTTGGGTTaGGACACAGCCAGGTTCAAATTCCATCAAATCCCA +
Preference number: 6 (lower is better)
Translates to: HLSRRAKPRVLG*DTARFKFHQIP
Trigger: TGGGATTTGATGGAATTTGAACCTGGCTGTGTCTCAACCCAAAACTCGAGGCTTAGCTCTCCTAGAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588105.1
CDS CCA 72 bp TTCCATAGTCGAGGGCCAGCTTTTCTCCCCGTTCCTTaGAAACTTGTCTCTTGTCATTCACATCACACTTGT +
Preference number: 6 (lower is better)
Translates to: FHSRGPAFLPVP*KLVSCHSHHTC
Trigger: ACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAAAGCTGGCCCTCGACTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS CCA 72 bp AGTGGCATCTCTCTAGGAGAGCTAAGCCTCGAGTTTTaGGTTGAGACACAGCCAGGTTCAAATTCCATCAAA +
Preference number: 6 (lower is better)
Translates to: SGISLGELSLEF*VETQPGSNSIK
Trigger: TTTGATGGAATTTGAACCTGGCTGTGTCTCAACCCAAAACTCGAGGCTTAGCTCTCCTAGAGAGATGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588105.1
CDS CAA 72 bp GCCAGCTTTTCTCCCCGTTCCTTGGAAACTTGTCTCTaGTCATTCACATCACACTTGTTCCCGAGTATCATC +
Preference number: 6 (lower is better)
Translates to: ASFSPRSLETCL*SFTSHLFPSII
Trigger: GATGATACTCGGGAACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAAAGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300935.8
ENST00000586682.1
CDS CAA 72 bp CCCACCTTTTCTCCCCGTTCCTTGGAAACTTGTCTCTaGTCATTCACATCACACTTGTTCCCGAGTATCATC +
Preference number: 6 (lower is better)
Translates to: PTFSPRSLETCL*SFTSHLFPSII
Trigger: GATGATACTCGGGAACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGGAACGGGGAGAAAAGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587156.5
CDS CAA 72 bp TCCTTGGAAACTTGTCTCTTGTCATTCACATCACACTaGTTCCCGAGTATCATCTTTTCGACGTCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: SLETCLLSFTSH*FPSIIFSTSAE
Trigger: CTCTGCAGACGTCGAAAAGATGATACTCGGGAACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300935.8
ENST00000586682.1
ENST00000587156.5