Pregenerated sensors for RAB6A (Homo sapiens)
Ensembl gene IDs: ENSG00000175582Ensembl transcript IDs: ENST00000541795.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 72 bp | CTAAACCTGCTTACCCTGTCTTGTGTGCCTCTTCCCTaGAAACCACAATCAAGGCTTTTGTCCACATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LNLLTLSCVPLP*KPQSRLLSTFP Trigger: GGGAAATGTGGACAAAAGCCTTGATTGTGGTTTTCAGGGAAGAGGCACACAAGACAGGGTAAGCAGGTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541795.1 |
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| CDS CAA 90 bp | CTGAAATTATCCGAACTAGCTAATCCTAAACCTGCTTACCCTGTCTaGTGTGCCTCTTCCCTGAAAACCACAATCAAGGCTTTTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LKLSELANPKPAYPV*CASSLKTTIKAFVH Trigger: GTGGACAAAAGCCTTGATTGTGGTTTTCAGGGAAGAGGCACACAAGACAGGGTAAGCAGGTTTAGGATTAGCTAGTTCGGATAATTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541795.1 |
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| CDS CAA 90 bp | CCCCTGCCAGGATTAGCTTTTTCATTAGAGATAGTAAACTCACCTTaGAGTACTCCTTTCATAGGCAAACCAACCAATCCAAAGCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: PLPGLAFSLEIVNSP*STPFIGKPTNPKPI Trigger: TATTGGCTTTGGATTGGTTGGTTTGCCTATGAAAGGAGTACTCAAAGGTGAGTTTACTATCTCTAATGAAAAAGCTAATCCTGGCAGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541795.1 |
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| CDS CAA 72 bp | GGATTAGCTTTTTCATTAGAGATAGTAAACTCACCTTaGAGTACTCCTTTCATAGGCAAACCAACCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAFSLEIVNSP*STPFIGKPTNP Trigger: TGGATTGGTTGGTTTGCCTATGAAAGGAGTACTCAAAGGTGAGTTTACTATCTCTAATGAAAAAGCTAATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541795.1 |
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| CDS CCA 72 bp | AACTATCTTTTCAATGGCAATCATCTCCTGATCTATTaGCCTCACCATACAGGAATAATGATAAAACCTAAA | + |
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Preference number: 6 (lower is better) Translates to: NYLFNGNHLLIY*PHHTGIMIKPK Trigger: TTTAGGTTTTATCATTATTCCTGTATGGTGAGGCCAATAGATCAGGAGATGATTGCCATTGAAAAGATAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541795.1 |
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