RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB44 (Homo sapiens)

Ensembl gene IDs: ENSG00000255587

Ensembl transcript IDs: ENST00000612677.6

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTTGCAAATAGAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTaGCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCAACATG +
Preference number: 1 (lower is better)
Translates to: CLQIEIARETRPTAP*QAEHRGTALTPSNM
Trigger: CATGTTGCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTCTATTTGCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CCA 90 bp GGGGCTCTGGAAGACAGGAGGGCATCGAGGCATATCAGAGGCCTTTaGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAG +
Preference number: 1 (lower is better)
Translates to: GALEDRRASRHIRGL*NITLPRNQILLGRK
Trigger: CTTTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTCGATGCCCTCCTGTCTTCCAGAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR GCA 90 bp ACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATaGTTGCAAATAGAAATAGCGAGGGAGACCAGGCCAACAGCGCCC +
Preference number: 1 (lower is better)
Translates to: TLLFPGTRFCWEESP*LQIEIARETRPTAP
Trigger: GGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR GCA 90 bp ATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTaGTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGGAG +
Preference number: 1 (lower is better)
Translates to: ISEAFGTLLFPGTRF*WEESPCLQIEIARE
Trigger: CTCCCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR GCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCGAGGTGATGCGGCCCTaGTCTGGGATCCGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSEVMRP*SGIRVL
Trigger: CAGGACTCGGATCCCAGAGCAGGGCCGCATCACCTC...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACAGTTTTGCCATACCCCTaGCCCTCAAGCCTTGTTCAC +
Preference number: 2 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTVLPYP*PSSLVH
Trigger: GTGAACAAGGCTTGAGGGGCAGGGGTATGGCAAAAC...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 90 bp AAAGGCAGAGGTGATGCGGCCCTGCTCTGGGATCCGAGTCCTGAGTaGAGAAGGGTTTTCCTGAACCTCCAAGCTGGTCCTCTGTGTCGT +
Preference number: 2 (lower is better)
Translates to: KGRGDAALLWDPSPE*RRVFLNLQAGPLCR
Trigger: ACGACACAGAGGACCAGCTTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGCCGCATCACCTCTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 90 bp GTTGAGAAGGGTTTTCCTGAACCTCCAAGCTGGTCCTCTGTGTCGTaGCTGTCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: VEKGFPEPPSWSSVS*LSRNKGQELRDRKP
Trigger: GGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGACAGCAACGACACAGAGGACCAGCTTGGAGGTTCAGGAAAACCCTTCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACATTACACCCACAGATGTaGGGCCAATATTTTGGTGTA +
Preference number: 2 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTLHPQM*GQYFGV
Trigger: TACACCAAAATATTGGCCGCACATCTGTGGGTGTAA...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 90 bp TTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTaGCAAATAGAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGC +
Preference number: 2 (lower is better)
Translates to: LLFPGTRFCWEESPC*QIEIARETRPTAPC
Trigger: GCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR GCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAGGTCCTCTGTGTCGTTaGTGTCCAGGAACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRGPLCR*CPGTKD
Trigger: GTCCTTTGTTCCTGGACAGCAACGACACAGAGGACC...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR CCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACAGTGCGGCCAATATTTTaGTGTATTTTCCTTAAGTCG +
Preference number: 2 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTVRPIF*CIFLKS
Trigger: CGACTTAAGGAAAATACACCAAAATATTGGCCGCAC...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 90 bp TGGGGCTCTGGAAGACAGGAGGGCATCGAGGCATATCAGAGGCCTTaGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: WGSGRQEGIEAYQRP*EHYSSQEPDSAGKK
Trigger: TTTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTCGATGCCCTCCTGTCTTCCAGAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCCTGAACCTCCAAGCTaGTCCTCTGTGTCGTTGCTG +
Preference number: 2 (lower is better)
Translates to: GTRFCWEESPCLQIEIARPEPPS*SSVSLL
Trigger: CAGCAACGACACAGAGGACCAGCTTGGAGGTTCAGG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR CCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGCAAAGCCCTCCTTTaGAGTGTGAAAGGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEESKALL*SVKGRG
Trigger: ACCTCTGCCTTTCACACTCCAAAGGAGGGCTTTGCT...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR CAA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCCCTGCCCCTCAAGCCTaGTTCACTCAGCAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSPAPQA*FTQQSP
Trigger: AGGGCTTTGCTGAGTGAACAAGGCTTGAGGGGCAGG...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR GCA 72 bp TGCATCCAGAGACTGACAACTCAGGCCAAAGCCCTGTaGTTGGGGACACCATGGCATTGGAGCAGGGGGCGG +
Preference number: 3 (lower is better)
Translates to: CIQRLTTQAKAL*LGTPWHWSRGR
Trigger: CCGCCCCCTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGTCTCTGGATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR CAA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGTTTGTTTGGAGAGTTTaGCCATACCCCTGCCCCTCA +
Preference number: 3 (lower is better)
Translates to: EIARETRPTAPCQAEHRGFVWRV*PYPCPS
Trigger: TGAGGGGCAGGGGTATGGCAAAACTCTCCAAACAAA...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR TCA 72 bp CCACACCCTAGCTGCCCCTCAAATGCATCCAGAGACTaGCAACTCAGGCCAAAGCCCTGTGCTTGGGGACAC +
Preference number: 3 (lower is better)
Translates to: PHPSCPSNASRD*QLRPKPCAWGH
Trigger: GTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGTCTCTGGATGCATTTGAGGGGCAGCTAGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR CAA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAGATCCGAGTCCTGAGTaGAGAAGGGTTTTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRDPSPE*RRVFLN
Trigger: GTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATC...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR-3UTR CAA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCAGCAAAGCCCTCCTTaGGAGTGTGAAAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: GTRFCWEESPCLQIEIARQQSPP*ECERQR
Trigger: CCTCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CCA 72 bp GAAGACAGGAGGGCATCGAGGCATATCAGAGGCCTTTaGAACATTACTCTTCCCAGGAACCAGATTCTGCTG +
Preference number: 3 (lower is better)
Translates to: EDRRASRHIRGL*NITLPRNQILL
Trigger: CAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTCGATGCCCTCCTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCCAGGCTGAGCCCCGCTaGGAGGAGCCCAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSQAEPR*EEPKTQ
Trigger: CTGGGTCTTGGGCTCCTCCCAGCGGGGCTCAGCCTG...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGCGCCCCCTGGTCACCTaGAGCTGCCCCCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRRPLVT*SCPRTS
Trigger: GGAGGTGCGGGGGCAGCTGCAGGTGACCAGGGGGCG...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGGTGGACCCTGGCTCCTaGTTGGGGTCCGGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGVDPGS*LGSGSC
Trigger: GCACGACCCGGACCCCAACCAGGAGCCAGGGTCCAC...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGGGGACACCATGGCATTaGAGCAGGGGGCGGGACCCC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGGTPWH*SRGRDP
Trigger: GGGGTCCCGCCCCCTGCTCCAATGCCATGGTGTCCC...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACTGGGCCCACTCCTGTaGGGGCAGTTGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTLGPLL*GQLWVR
Trigger: CCTCACCCACAACTGCCCTCACAGGAGTGGGCCCAG...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCCTCAGCTAGTCGCTaGACCTCGCGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTPSASR*TSRSLA
Trigger: GGCCAAGGAGCGCGAGGTGCAGCGACTAGCTGAGGG...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACATGGAGGGCATCTCTCTaGCTGGGCGGCTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTWRASL*LGGLAG
Trigger: CCCAGCCAAGCCGCCCAGGCAGAGAGATGCCCTCCA...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGTGCTGCCCAGGAAGCTaGACTTGGCCACCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGCCPGS*TWPPPG
Trigger: ACCTGGCGGTGGCCAAGTTCAGCTTCCTGGGCAGCA...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCTCCCCAGCTGCTCCATaGAGGCAAGGAACGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSSPAAP*RQGTPP
Trigger: AGGAGGCGTTCCTTGCCTTCATGGAGCAGCTGGGGA...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCTTCCCAGGAGAAGGATaGCCACCCCATCCGACCCTG +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSFPGEG*PPHPTL
Trigger: CAGGGTCGGATGGGGTGGTCATCCTTCTCCTGGGAA...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGGGCTCCAGGATGTTGTaGCCCAAGGCGGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGGSRML*PKAALH
Trigger: GTGCAGTGCCGCCTTGGGTCACAACATCCTGGAGCC...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTCAGGAAGGCCCTCCTaGACCGCTGGGCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSSGRPS*TAGPAW
Trigger: CCAGGCGGGCCCAGCGGTGCAGGAGGGCCTTCCTGA...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCCGCCTCCTCCAGAGCTaGGAAGCTGGTGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSRLLQS*EAGGSR
Trigger: TCTGCTACCACCAGCTTCCCAGCTCTGGAGGAGGCG...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCCTGGATCTGTTTGCTaGACCCAGCTGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGPGSVC*TQLGPG
Trigger: CCCAGGCCCCAGCTGGGTCCAGCAAACAGATCCAGG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCAACAGCCGAATCTCTTaGGCGGCCTCTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSNSRIS*AASWGP
Trigger: TGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTT...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGCTGCGTGAGCAGTCGTaGGGGATGGCCTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRLREQS*GMAWVG
Trigger: CCCAACCCAGGCCATCCCTCACGACTGCTCACGCAG...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCGGGACCCCCAAATGTaGCCCCTGGGAGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGRDPQM*PLGGVF
Trigger: AAACACACCTCCCAGGGGTCACATTTGGGGGTCCCG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCGCTGGCTCTCTTGTCTaGCGCCGCCGGTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSAGSLV*RRRLEP
Trigger: GGGCTCCAACCGGCGGCGGCAGACAAGAGAGCCAGC...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCTCACGCTTGGCCTCCTaGAGCTGCTGGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSSRLAS*SCWFSE
Trigger: CTCAGAGAACCAGCAGCTGCAGGAGGCCAAGCGTGA...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGCTGGTCACCTGCAGCTaGCCCCGCACCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQLVTCS*PRTSSS
Trigger: GCTGGAGGAGGTGCGGGGGCAGCTGCAGGTGACCAG...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACAAGGAGTGGGGCCTTCTaGTTCCACCTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTRSGAF*FHLSLW
Trigger: CCACAGGCTCAGGTGGAAGCAGAAGGCCCCACTCCT...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACATCCTGGGCCAGTTGCTaGCCAGCTTCCACGGACACT +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTSWASC*PASTDT
Trigger: AGTGTCCGTGGAAGCTGGGCAGCAACTGGCCCAGGA...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACATGCTGGACCTCGCGGTaGTGGTCAGAGTCACGCTTC +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTCWTSR*WSESRF
Trigger: GAAGCGTGACTCTGACCACCACCGCGAGGTCCAGCA...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACAACAAATTCCAGGCCCTaGAAGGGCTCAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTTNSRP*KGSAGP
Trigger: GGGGCCAGCTGAGCCCTTCCAGGGCCTGGAATTTGT...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGGGGAGGAGAGCCCCTTaGAGGTGCCGATTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGGRRAP*RCRFSR
Trigger: CCTGGAAAATCGGCACCTCCAAGGGGCTCTCCTCCC...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGAGGGATGGCCTGGGTTaGGCTTCCTGCTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGRDGLG*ASCSAM
Trigger: CATGGCTGAGCAGGAAGCCCAACCCAGGCCATCCCT...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCGGGGTCTCCCGGGGATaGGGTCAGCCCAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSGVSRG*GQPSFP
Trigger: AGGGAAGCTGGGCTGACCCCATCCCCGGGAGACCCC...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGCCTGATGTGTGCTCCTaGGGTGGGAGAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRPDVCS*GGRAGP
Trigger: AGGCCCAGCTCTCCCACCTCAGGAGCACACATCAGG...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCTTGGTTCCCTGGAGTaGGGCGGGCCTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGLGSLE*GGPCSS
Trigger: AGAAGAACAAGGCCCGCCTCACTCCAGGGAACCAAG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCCAGGACAGGACAGGTaGTCAGGAGCAACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGPGQDR*SGATAE
Trigger: TTCGGCTGTTGCTCCTGATCACCTGTCCTGTCCTGG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCCCACCCCGTCAGCCTTaGGGAGCAGCTGTCGCGTCA +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSPPRQP*GAAVAS
Trigger: TGACGCGACAGCTGCTCCGCAAGGCTGACGGGGTGG...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGGACCCAAGGCGGCACTaGACTCCCCAAAATAGACCC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGDPRRH*TPQNRP
Trigger: GGGTCTATTTTGGGGAGTGCAGTGCCGCCTTGGGTC...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGAGGCCAACAGCGCCCTaGCAAGCAGAGCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRRPTAP*QAEHRG
Trigger: CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCAGGCCAAAGCCCTGTaGTTGGGGACACCATGGCAT +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGQAKAL*LGTPWH
Trigger: ATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCCAGCCACACCCTAGCTaGCCCTCAAATGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSQPHPS*PSNASR
Trigger: TCTGGATGCATTTGAGGGGCAGCTAGGGTGTGGCTG...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGTCTGCCGCCGCCGGTTaGAGCCCAGCTTCCGGACTT +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQSAAAG*SPASGL
Trigger: AAGTCCGGAAGCTGGGCTCCAACCGGCGGCGGCAGA...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCACCCTGGCTCCTGGTTaGGGTCCGGGTCGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSTLAPG*GPGRAV
Trigger: AACCGCACGACCCGGACCCCAACCAGGAGCCAGGGT...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGACCTGGGCGGCTTGGCTaGGCCCACTCCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRPGRLG*AHSCEG
Trigger: GCCCTCACAGGAGTGGGCCCAGCCAAGCCGCCCAGG...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAGGGCATCTCTCTGCCTaGGCGGCTTGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQGHLSA*AAWLGP
Trigger: TGGGCCCAGCCAAGCCGCCCAGGCAGAGAGATGCCC...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGGGACAGGAAACCCCATaGGTGTCCATCCTACCCAGG +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGGQETP*VSILPR
Trigger: CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCC...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTGGCTCTGGGGCCACTaGAGCGCCTTCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSWLWGH*SAFTIS
Trigger: GCTGATGGTGAAGGCGCTGCAGTGGCCCCAGAGCCA...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGTGTCCAGTCCCCAGCTaGTCCATGAAGGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGCPVPS*SMKARN
Trigger: GTTCCTTGCCTTCATGGAGCAGCTGGGGACTGGACA...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCTGGATCTTCAAGCCTaGTCTCTGCCCTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGLDLQA*SLPLVP
Trigger: GGGAACCAAGGGCAGAGAGCAGGCTTGAAGATCCAG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCGCTGTGTCCCAGAGCTaGAGCACAAAGCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSAVSQS*STKHLL
Trigger: CAACAAGTGCTTTGTGCTGCAGCTCTGGGACACAGC...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCGAGGTGATGCGGCCCTaGTCTGGGATCCGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSEVMRP*SGIRVL
Trigger: CAGGACTCGGATCCCAGAGCAGGGCCGCATCACCTC...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCTCTGTCCAGTCTCCATaGTGCGTTGGCCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSSVQSP*CVGPLK
Trigger: TTTGAGAGGGCCAACGCACCATGGAGACTGGACAGA...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCGCACCTCGCGCTCCTTaGCCTCTAGGACGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSAPRAP*PLGRPA
Trigger: TGCAGGACGTCCTAGAGGCCAAGGAGCGCGAGGTGC...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGTGTGTGCTCCTGAGGTaGGAGAGCTGGGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQCVLLR*ESWASS
Trigger: GCTGGAGGCCCAGCTCTCCCACCTCAGGAGCACACA...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGGCATGCAGGTCCTGCTaGAGGGCATCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRACRSC*RASLCL
Trigger: CAGGCAGAGAGATGCCCTCCAGCAGGACCTGCATGC...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACAAGCAGAGAGTCTTGCTaGGGGAGTTCCGAATGCGCA +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTSRESC*GSSECA
Trigger: TGCGCATTCGGAACTCCCCCAGCAAGACTCTCTGCT...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAATCTTGGGCGGCCTCTTaGGGGCCACCTTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQSWAAS*GPPSPA
Trigger: CGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGA...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAGCAGTGGCTTCCTTCTaGGGAGCCTGTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQAVASF*GACGGS
Trigger: AGAGCCCCCACAGGCTCCGCAGAAGGAAGCCACTGC...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGTCCTCCTGCCGCAGCTaGCCCCACAGTTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQSSCRS*PHSCQI
Trigger: AATCTGGCAACTGTGGGGGCAGCTGCGGCAGGAGGA...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAGCCTCTAGGACGTCCTaGATCTGGGAGGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQASRTS*IWEVRA
Trigger: GGCCCTCACCTCCCAGATGCAGGACGTCCTAGAGGC...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACATTCTGGTGCAGCAGGTaGAGGAAGGATGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTFWCSR*RKDVLP
Trigger: GGGCAAAACATCCTTCCTGCACCTGCTGCACCAGAA...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGGCTTCCACGGACACTTaGCGTTCCTCCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRASTDT*RSSSQS
Trigger: GGACTGTGAGGAGGAACGGCAAGTGTCCGTGGAAGC...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACAGGTCCTCTGTGTCGTTaGTGTCCAGGAACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTGPLCR*CPGTKD
Trigger: GTCCTTTGTTCCTGGACAGCAACGACACAGAGGACC...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGCCTCCTGCAGGCGGCTaGTCATCTTGGCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQPPAGG*SSWPES
Trigger: GCTTTCTGGCCAAGATGACCAGCCGCCTGCAGGAGG...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTGGACCTCGCGGTGGTaGTCAGAGTCACGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSWTSRW*SESRFL
Trigger: GAGGAAGCGTGACTCTGACCACCACCGCGAGGTCCA...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAGCCTCCAGCTCCCTCTaGCCCTCAGCTAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRASSSL*PSASRC
Trigger: GCAGCGACTAGCTGAGGGCCAGAGGGAGCTGGAGGC...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCGTCCAGGCGCCCCCTaGTCACCTGCAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARRPGAP*SPAAAP
Trigger: GGGGGCAGCTGCAGGTGACCAGGGGGCGCCTGGACG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCAGGGCTCTAGCCCTCTaGGTCCCCAGTCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSRALAL*VPSLGS
Trigger: TGAGCCAAGACTGGGGACCCAGAGGGCTAGAGCCCT...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGGCTCCAGCCTCTCTGTaGGCACCGGACCCACAAATT +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRAPASL*APDPQI
Trigger: AATTTGTGGGTCCGGTGCCCACAGAGAGGCTGGAGC...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGTTCCTTCCTCAGACCTaGGTTCCTCTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGFLPQT*VPLPAP
Trigger: AGGAGCTGGAAGAGGAACCCAGGTCTGAGGAAGGAA...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCCTGGAGTCCATTCCTaGATCTTCAAGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGPGVHS*IFKPAL
Trigger: GAGAGCAGGCTTGAAGATCCAGGAATGGACTCCAGG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCCCAAGGACCTGGCCATaGGCTTCTCTTAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSPRTWP*ASLSPS
Trigger: TGAGGGGCTAAGAGAAGCTCATGGCCAGGTCCTTGG...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGCCTTGTTCTTCTGCGTaGGCAGTCGTGAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQPCSSA*AVVRDG
Trigger: GCCATCCCTCACGACTGCTCACGCAGAAGAACAAGG...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAGGGCTCCAGCAGAGCTaGAGGGCTCCGTGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEEGLQQS*RAPCGG
Trigger: CCCTCCGCACGGAGCCCTGCAGCTCTGCTGGAGCCC...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAGCCTTCACCATCAGCTaGCTCTCTTGTCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQAFTIS*LSCLPP
Trigger: CGGCGGCAGACAAGAGAGCCAGCTGATGGTGAAGGC...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGGGCGGCCCTCGGGTGTaGACCCTGGCTCCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARGGPRV*TLAPGW
Trigger: CCAACCAGGAGCCAGGGTCCACACCCGAGGGCCGCC...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAGGTGAGGGTCCGGGCTaGGTTTCCCGCTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRGEGPG*VSRSVM
Trigger: CATGACTGAGCGGGAAACCCAGCCCGGACCCTCACC...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAACCGCTGGGCCCGCCTaGCCCTGCTCCAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEETAGPA*PCSSLS
Trigger: AGAGAGGCTGGAGCAGGGCCAGGCGGGCCCAGCGGT...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAGATGCGGCCCTGCTCTaGGATCCGAGTCCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQDAALL*DPSPEL
Trigger: CAACTCAGGACTCGGATCCCAGAGCAGGGCCGCATC...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 72 bp GGTGATGCGGCCCTGCTCTGGGATCCGAGTCCTGAGTaGAGAAGGGTTTTCCTGAACCTCCAAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GDAALLWDPSPE*RRVFLNLQAGP
Trigger: AGGACCAGCTTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGCCGCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAACCCTCCTTTGGAGTGTaGAAGGCAGAGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQPSFGV*KAEVMR
Trigger: CCGCATCACCTCTGCCTTTCACACTCCAAAGGAGGG...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAGAAGGCCTGCAGTTCTaGCGCTGCCTGAGAGGACCA +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGREGLQF*RCLRGP
Trigger: TGGTCCTCTCAGGCAGCGGCAGAACTGCAGGCCTTC...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGCTGGGGCTCCTCCTaGCGCAGCTGCCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIASWGSS*RSCPHS
Trigger: ACTGTGGGGGCAGCTGCGGCAGGAGGAGCCCCAGCT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCGAGGGCTGCCAAAGTTaGTCAGTAGCTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSEGCQS*SVAGPS
Trigger: ACTGGGACCAGCTACTGAGCAACTTTGGCAGCCCTC...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGTTCAACAGGCTGCTCTaGTCTAATGTCCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGFNRLL*SNVLLM
Trigger: CATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAA...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAAGGCCTGGATCTGTTTaGTGGACCCAGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRRPGSV*WTQLGP
Trigger: AGGCCCCAGCTGGGTCCAGCAAACAGATCCAGGCCT...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAAGAGCCCCTTGGAGGTaGCGATTTTCCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQRAPWR*RFSRSG
Trigger: CCCACTCCTGGAAAATCGGCACCTCCAAGGGGCTCT...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGGTTTTGCCATACCCCTaGCCCTCAAGCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRVLPYP*PSSLVH
Trigger: GTGAACAAGGCTTGAGGGGCAGGGGTATGGCAAAAC...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAGTCTCCATGGTGCGTTaGCCCTCTCAAAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQVSMVR*PSQRLP
Trigger: TGGGAGCCTTTGAGAGGGCCAACGCACCATGGAGAC...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCTCGGGTGTGGACCCTaGCTCCTGGTTGGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARLGCGP*LLVGVR
Trigger: CCGGACCCCAACCAGGAGCCAGGGTCCACACCCGAG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGACTGGGTCCCCAGTCTTaGCTCAGAGCCAGTGGCATG +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRLGPQS*LRASGM
Trigger: CATGCCACTGGCTCTGAGCCAAGACTGGGGACCCAG...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAAGCAGTCGTGAGGGATaGCCTGGGTTGGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRSSREG*PGLGFL
Trigger: CAGGAAGCCCAACCCAGGCCATCCCTCACGACTGCT...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCCCAAAGCCCTGTGCTTaGGGACACCATGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSPKPCA*GHHGIG
Trigger: TCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGG...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGCCAGGTCCTCGCGGGTaGCAAAGCCCCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAPGPRG*QSPSPW
Trigger: CCAAGGAGAGGGGCTTTGTCACCCGCGAGGACCTGG...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGAGCCCCATCTGGATCTaGAGATGGCTCCTGACCAAA +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQSPIWI*RWLLTK
Trigger: TTTGGTCAGGAGCCATCTTCAGATCCAGATGGGGCT...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTGCCACCAGGCTTCCTaGGAGACCCCAGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARCHQAS*ETPEEA
Trigger: CGCCTCCTCTGGGGTCTCTCAGGAAGCCTGGTGGCA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGCTTGTCATCTGGGTCTaGGGCCTGGATCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQLVIWV*GLDLFA
Trigger: AGCAAACAGATCCAGGCCTCAGACCCAGATGACAAG...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGGAGGGCAGTTGTGGGTaGGGGTCCGGGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAEGSCG*GSGLGF
Trigger: GAAACCCAGCCCGGACCCTCACCCACAACTGCCCTC...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAGCAGTTTCTAGGCCGTaGGCCTCAACCGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRAVSRP*ASTDCS
Trigger: AGAGCAGTCGGTTGAGGCTCACGGCCTAGAAACTGC...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCCAAATAGAAGTGTGTaGATGATTCTGAGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: EIARETRPTAPCQAEHRGPNRSV*MILSLG
Trigger: GCCGAGACTCAGAATCATTCACACACTTCTATTTGG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGAATGAGCACTTTGAATaGAGGTGCCACCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRNEHFE*RCHQAS
Trigger: GGAAGCCTGGTGGCACCTGCATTCAAAGTGCTCATT...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAACCGACTGCTCTGACTaGTCTGAACTGAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQTDCSD*SELRSC
Trigger: GCAGGACCTCAGTTCAGAGCAGTCAGAGCAGTCGGT...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGACGGGCCTTGTTCTTCTaGGTGAGCAGTCGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRRALFF*VSSREG
Trigger: TCCCTCACGACTGCTCACGCAGAAGAACAAGGCCCG...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTAGGACGTCCTGCATCTaGGAGGTGAGGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSARTSCI*EVRARP
Trigger: GGGCCTGGCCCTCACCTCCCAGATGCAGGACGTCCT...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAACCGATTTTCCAGGAGTaGGGCCTTCTGCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQPIFQE*GLLLPP
Trigger: AGGTGGAAGCAGAAGGCCCCACTCCTGGAAAATCGG...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAACCTGAACCTCCAAGCTaGTCCTCTGTGTCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQPEPPS*SSVSLL
Trigger: CAGCAACGACACAGAGGACCAGCTTGGAGGTTCAGG...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 72 bp GGTTTTCCTGAACCTCCAAGCTGGTCCTCTGTGTCGTaGCTGTCCAGGAACAAAGGACAGGAGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GFPEPPSWSSVS*LSRNKGQELRD
Trigger: GTCCCTCAGCTCCTGTCCTTTGTTCCTGGACAGCAACGACACAGAGGACCAGCTTGGAGGTTCAGGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCGATGATGGTAAGATGTaGCAGACATACAAACGAAGA +
Preference number: 4 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSDDGKM*QTYKRR
Trigger: TCTTCGTTTGTATGTCTGTCACATCTTACCATCATC...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGGAAAGCCTGCCAGGTTaGCTGCCAGCTGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAESLPG*LPAGAP
Trigger: AGGAGCCCCAGCTGGCAGGCAACCTGGCAGGCTTTC...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGTTTCTCCTCCACCTaGCAGGACACCCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIASFSST*QDTRPL
Trigger: CAGGGGCCGGGTGTCCTGGCAGGTGGAGGAGAAACT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGCTGCAGGGCTCCGTaGGGAGGGCTGCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIASCRAP*GGLPKL
Trigger: CAACTTTGGCAGCCCTCCGCACGGAGCCCTGCAGCT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGACCACACGGGGTGTCTaGGGGCCTGAGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIATTRGV*GPEVAL
Trigger: AAGAGCCACCTCAGGCCCCCAGACACCCCGTGTGGT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGGGAACCAGATTCTGCTaGGAAGAAAGCCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQGTRFC*EESPCL
Trigger: CAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGTACAAACGAAGACCATaGCCGTCTCTCCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: QRTGAEGQETPWVSILPRYKRRP*PSLQDS
Trigger: AGAGTCTTGGAGAGACGGCCATGGTCTTCGTTTGTA...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGTTCTGCCGCTGCCTaGGAGGACCAAGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEESSAAA*EDQDSG
Trigger: GCCAGAGTCTTGGTCCTCTCAGGCAGCGGCAGAACT...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTTCTGAGGCAGCCTCCTaGTGTGTGCTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSASEAAS*CVLLRW
Trigger: CCACCTCAGGAGCACACATCAGGAGGCTGCCTCAGA...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGATGGAGATCTGCCTaGCCACACGGGGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEERWRSA*PHGVSG
Trigger: CCCAGACACCCCGTGTGGTCAGGCAGATCTCCATCT...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAAATGCATCCAGAGACTaGCAACTCAGGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRNASRD*QLRPKP
Trigger: GGGCTTTGGCCTGAGTTGTCAGTCTCTGGATGCATT...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTCTTGGCCAGAAAGCCTaGCAGGTTGCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSALGQKA*QVACQL
Trigger: CAGCTGGCAGGCAACCTGGCAGGCTTTCTGGCCAAG...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGAGTCGCTCTCAGCCTaGAGCTGCTGCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSAESLSA*SCCFSW
Trigger: CCAGGAGAAGCAGCAGCTGCAGGCTGAGAGCGACTC...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGATGCGGTTCAACAGGCTaGTCTGCTCTAATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRCGSTG*SALMSC
Trigger: GCAGGACATTAGAGCAGAGCAGCCTGTTGAACCGCA...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAATTGGGGTCCGGGTCGTaGGGTTCAACAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEELGSGS*GSTGCS
Trigger: AGAGCAGCCTGTTGAACCGCACGACCCGGACCCCAA...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAGTGGCATGCAGGTCCTaGTGGAGGGCATCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEEVACRS*WRASLC
Trigger: GCAGAGAGATGCCCTCCAGCAGGACCTGCATGCCAC...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAACAAGCAGAGAGTCTTaGTGGGGGAGTTCCGAATGC +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRTSRES*WGSSEC
Trigger: GCATTCGGAACTCCCCCAGCAAGACTCTCTGCTTGT...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGTTCCTGGGCCAGTTaGTGCCCAGCTTCCACGGAC +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEESSWAS*CPASTD
Trigger: GTCCGTGGAAGCTGGGCAGCAACTGGCCCAGGAACT...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGAGGACCAAGACTCTaGCTCTGGGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEERGPRL*LWGHCS
Trigger: GCTGCAGTGGCCCCAGAGCCAGAGTCTTGGTCCTCT...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGGGCGGCTGGTCATCTTaGCCAGAAAGCCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARGGWSS*PESLPG
Trigger: ACCTGGCAGGCTTTCTGGCCAAGATGACCAGCCGCC...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGACCTGAGCCTGTGGTGTaGCAGATGGGAGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRPEPVV*QMGEKQ
Trigger: TTGTTTCTCTCCCATCTGCCACACCACAGGCTCAGG...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCTGCCCTTGGTTCCCTaGAGTGAGGCGGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARLPLVP*SEAGLV
Trigger: AACAAGGCCCGCCTCACTCCAGGGAACCAAGGGCAG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGAGGTAATCAGGGTTaGCCTGGGGTCCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIARGNQG*PGVPLQ
Trigger: CTGGAGGGGGACCCCAGGCCAACCCTGATTACCTCT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAAGCAAAGCCCTCCTTTaGAGTGTGAAAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQSKALL*SVKGRG
Trigger: ACCTCTGCCTTTCACACTCCAAAGGAGGGCTTTGCT...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGCAGCTGCTGGTTCTCTaGGGCAGCCTCCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAQLLVL*GSLLMC
Trigger: ACACATCAGGAGGCTGCCTCAGAGAACCAGCAGCTG...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAATATTGTCCTTGGCGCTaGAAGTCACCCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEEYCPWR*KSPQVG
Trigger: CCCCACCTGGGGTGACTTTCAGCGCCAAGGACAATA...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAGTCCAGTCTCCATGGTaGGTTGGCCCTCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEEVQSPW*VGPLKG
Trigger: GCCTTTGAGAGGGCCAACGCACCATGGAGACTGGAC...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGCTGCAGTTCTGCCGCTaGCTGAGAGGACCAAGACTC +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIALQFCR*LRGPRL
Trigger: GAGTCTTGGTCCTCTCAGGCAGCGGCAGAACTGCAG...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTCTCCGTGCGGAGGGCTaGCAAAGTTGCTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSALRAEG*QSCSVA
Trigger: AGCTACTGAGCAACTTTGGCAGCCCTCCGCACGGAG...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTCCGAGATGGAGATCTaGCTGACCACACGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARSEMEI*LTTRGV
Trigger: GACACCCCGTGTGGTCAGGCAGATCTCCATCTCGGA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGATCTGCTCTAATGTCCTaGTCATGTGGGTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRSALMS*SCGSTP
Trigger: AGGAGTGGACCCACATGAGCAGGACATTAGAGCAGA...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAACTCAAAGGCTCCCAGTaGAACACACAGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEELKGSQ*NTQPWA
Trigger: AGCCCAGGGCTGTGTGTTCCACTGGGAGCCTTTGAG...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCAATGTCCTGCTCATGTaGGTCCACTCCTTTATTGTC +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSNVLLM*VHSFIV
Trigger: GACAATAAAGGAGTGGACCCACATGAGCAGGACATT...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTTGGCTCAGAGCCAGTaGCATGCAGGTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARLAQSQ*HAGPAG
Trigger: TCCAGCAGGACCTGCATGCCACTGGCTCTGAGCCAA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGGTGAGGTTGGGGCTCTaGAAGACAGGAGGGCATCGA +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAVRLGL*KTGGHR
Trigger: TCGATGCCCTCCTGTCTTCCAGAGCCCCAACCTCAC...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAACAAAGCCCCTCTCCTTaGCACCACAGTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEEQSPSP*HHSPGR
Trigger: TCTTCCAGGACTGTGGTGCCAAGGAGAGGGGCTTTG...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGCCTGTGGGGGCTCTaGCTGGAGCCAAAGATGTTT +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIASLWGL*LEPKMF
Trigger: AAACATCTTTGGCTCCAGCCAGAGCCCCCACAGGCT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTTCTGGGTCTGAGGCCTaGATCTGTTTGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSASGSEA*ICLLDP
Trigger: TGGGTCCAGCAAACAGATCCAGGCCTCAGACCCAGA...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 72 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTaGCAAATAGAAATAGCGAGGGAGACCAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPC*QIEIARETRPT
Trigger: TGTTGGCCTGGTCTCCCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
3UTR CAA 72 bp GGAAGACAGGAGGGCATCGAGGCATATCAGAGGCCTTaGGAACATTACTCTTCCCAGGAACCAGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRQEGIEAYQRP*EHYSSQEPDSA
Trigger: AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTCGATGCCCTCCTGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGCTGGGATCCGAGTCCTaGGTTGAGAAGGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIALGSES*VEKGFP
Trigger: AGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAG...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGCTGCCCCCACAGTTaGCAGATTTCCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIASCPHS*QISICL
Trigger: CAAGCAGATGGAAATCTGGCAACTGTGGGGGCAGCT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGGCAGGAAGGATGTTTTaGCCACGTTGGAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARAGRMF*PRWSLP
Trigger: TGGGAGACTCCAACGTGGGCAAAACATCCTTCCTGC...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTTGGCACCACAGTCCTaGAAGAAGGCCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARLAPQS*KKACSS
Trigger: AGAACTGCAGGCCTTCTTCCAGGACTGTGGTGCCAA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTCAGCCCAGCTTCCCTaGAGTCCATTCCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARSAQLP*SPFLDL
Trigger: AAGATCCAGGAATGGACTCCAGGGAAGCTGGGCTGA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGTGGCGAAAGAATTCTaGTGCAGCAGGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSAVAKEF*CSRCRK
Trigger: CTTCCTGCACCTGCTGCACCAGAATTCTTTCGCCAC...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTGTCGCGTCATACTGTaGTACCTCTCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARCRVIL*YLSWPA
Trigger: AGCTGGCCAAGAGAGGTACCACAGTATGACGCGACA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTGGGCAAAGCTCTCCTaGGAGGTGATGTCGTACATG +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARWAKLS*EVMSYM
Trigger: CATGTACGACATCACCTCCCAGGAGAGCTTTGCCCA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCGTGCGGCCAATATTTTaGTGTATTTTCCTTAAGTCG +
Preference number: 4 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSVRPIF*CIFLKS
Trigger: CGACTTAAGGAAAATACACCAAAATATTGGCCGCAC...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCTTCTTCTTGCATCCTaGGTGACCTGGCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARLLLAS*VTWPGL
Trigger: TAAACCTGGCCAGGTCACTCAGGATGCAAGAAGAAG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGAAGTTGCTCAGTAGCTaGTCCCAGTCATCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARKLLSS*SQSSLS
Trigger: GGACAACGATGACTGGGACCAGCTACTGAGCAACTT...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAACCCAAATGTGACCCCTaGGAGGTGTGTTTTGTATGG +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEEPKCDP*EVCFVW
Trigger: CCATACAAAACACACCTCCCAGGGGTCACATTTGGG...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAATGCCAGATTTCCATCTaGTTGGGAAGTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEECQISI*LGSKCP
Trigger: TGGACACTTACTTCCCAAGCAGATGGAAATCTGGCA...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAAGATTTCCATCTGCTTaGGAAGTAAGTGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEERFPSA*EVSVQS
Trigger: GGACTGGACACTTACTTCCCAAGCAGATGGAAATCT...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CCA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCATATCAGAGGCCTTTaGAACATTACTCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRFCWEESPCLQIEIARHIRGL*NITLPR
Trigger: CCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR GCA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAATTACACCCACAGATGTaGGGCCAATATTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEELHPQM*GQYFGV
Trigger: TACACCAAAATATTGGCCGCACATCTGTGGGTGTAA...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR TCA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGACACCGAGCAACATGTaGTTAACAGGTTACACTAAT +
Preference number: 4 (lower is better)
Translates to: PGTRFCWEESPCLQIEIATPSNM*LTGYTN
Trigger: ATTAGTGTAACCTGTTAATCACATGTTGCTCGGTGT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp GGGCCTGAGGTGGCTCTTGGGGTCGGGGGCGGGCTCCAGCAGAGCTaGAGGGCTCCGTGCGGAGGGCTGCCAAAGTTGCTCAGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: GPEVALGVGGGLQQS*RAPCGGLPKLLSSW
Trigger: CCAGCTACTGAGCAACTTTGGCAGCCCTCCGCACGGAGCCCTGCAGCTCTGCTGGAGCCCGCCCCCGACCCCAAGAGCCACCTCAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 90 bp CCCGCTGGGAGGAGCCCAAGACCCAGGGCCCTTGTCATCTGGGTCTaGGGCCTGGATCTGTTTGCTGGACCCAGCTGGGGCCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PAGRSPRPRALVIWV*GLDLFAGPSWGLGR
Trigger: CCTCCCCAGGCCCCAGCTGGGTCCAGCAAACAGATCCAGGCCTCAGACCCAGATGACAAGGGCCCTGGGTCTTGGGCTCCTCCCAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp CCTCCTGCAGGCGGCTGGTCATCTTGGCCAGAAAGCCTGCCAGGTTaGCTGCCAGCTGGGGCTCCTCCTGCCGCAGCTGCCCCCACAGTT +
Preference number: 5 (lower is better)
Translates to: PPAGGWSSWPESLPG*LPAGAPPAAAAPTV
Trigger: AACTGTGGGGGCAGCTGCGGCAGGAGGAGCCCCAGCTGGCAGGCAACCTGGCAGGCTTTCTGGCCAAGATGACCAGCCGCCTGCAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp GCTCTTGGGGTCGGGGGCGGGCTCCAGCAGAGCTGCAGGGCTCCGTaGGGAGGGCTGCCAAAGTTGCTCAGTAGCTGGTCCCAGTCATCG +
Preference number: 5 (lower is better)
Translates to: ALGVGGGLQQSCRAP*GGLPKLLSSWSQSS
Trigger: CGATGACTGGGACCAGCTACTGAGCAACTTTGGCAGCCCTCCGCACGGAGCCCTGCAGCTCTGCTGGAGCCCGCCCCCGACCCCAAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp AGTCGCTGCACCTCGCGCTCCTTGGCCTCTAGGACGTCCTGCATCTaGGAGGTGAGGGCCAGGCCCCGAGAGTCGCTCTCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SRCTSRSLASRTSCI*EVRARPRESLSACS
Trigger: GCTGCAGGCTGAGAGCGACTCTCGGGGCCTGGCCCTCACCTCCCAGATGCAGGACGTCCTAGAGGCCAAGGAGCGCGAGGTGCAGCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp GAGAGACCCCAGAGGAGGCGGCCCTCGGGTGTGGACCCTGGCTCCTaGTTGGGGTCCGGGTCGTGCGGTTCAACAGGCTGCTCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: ERPQRRRPSGVDPGS*LGSGSCGSTGCSAL
Trigger: TAGAGCAGAGCAGCCTGTTGAACCGCACGACCCGGACCCCAACCAGGAGCCAGGGTCCACACCCGAGGGCCGCCTCCTCTGGGGTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp TCAGCTAGTCGCTGCACCTCGCGCTCCTTGGCCTCTAGGACGTCCTaGATCTGGGAGGTGAGGGCCAGGCCCCGAGAGTCGCTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SASRCTSRSLASRTS*IWEVRARPRESLSA
Trigger: GGCTGAGAGCGACTCTCGGGGCCTGGCCCTCACCTCCCAGATGCAGGACGTCCTAGAGGCCAAGGAGCGCGAGGTGCAGCGACTAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp TGTGGGCACCGGACCCACAAATTCCAGGCCCTGGAAGGGCTCAGCTaGCCCCAGGGTGAGGGCTCTAGCCCTCTGGGTCCCCAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: CGHRTHKFQALEGLS*PQGEGSSPLGPQSW
Trigger: CCAAGACTGGGGACCCAGAGGGCTAGAGCCCTCACCCTGGGGCCAGCTGAGCCCTTCCAGGGCCTGGAATTTGTGGGTCCGGTGCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp TGCTCCAGCCTCTCTGTGGGCACCGGACCCACAAATTCCAGGCCCTaGAAGGGCTCAGCTGGCCCCAGGGTGAGGGCTCTAGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: CSSLSVGTGPTNSRP*KGSAGPRVRALALW
Trigger: CCAGAGGGCTAGAGCCCTCACCCTGGGGCCAGCTGAGCCCTTCCAGGGCCTGGAATTTGTGGGTCCGGTGCCCACAGAGAGGCTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGGGGGACACCATGGCATaGGAGCAGGGGGCGGGACCC +
Preference number: 5 (lower is better)
Translates to: EIARETRPTAPCQAEHRGGDTMA*EQGAGP
Trigger: GGGTCCCGCCCCCTGCTCCAATGCCATGGTGTCCCC...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp GCTCTAGCCCTCTGGGTCCCCAGTCTTGGCTCAGAGCCAGTGGCATaGAGGTCCTGCTGGAGGGCATCTCTCTGCCTGGGCGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ALALWVPSLGSEPVA*RSCWRASLCLGGLA
Trigger: AGCCAAGCCGCCCAGGCAGAGAGATGCCCTCCAGCAGGACCTGCATGCCACTGGCTCTGAGCCAAGACTGGGGACCCAGAGGGCTAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp TGGTGCGTTGGCCCTCTCAAAGGCTCCCAGTGGAACACACAGCCCTaGGCTCTGGGACCTGGTGGTAGGGTGACTGCTGCCCTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: WCVGPLKGSQWNTQP*ALGPGGRVTAALRS
Trigger: GCTCCGCAGGGCAGCAGTCACCCTACCACCAGGTCCCAGAGCCCAGGGCTGTGTGTTCCACTGGGAGCCTTTGAGAGGGCCAACGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp CGGCTGGTCATCTTGGCCAGAAAGCCTGCCAGGTTGCCTGCCAGCTaGGGCTCCTCCTGCCGCAGCTGCCCCCACAGTTGCCAGATTTCC +
Preference number: 5 (lower is better)
Translates to: RLVILARKPARLPAS*GSSCRSCPHSCQIS
Trigger: GGAAATCTGGCAACTGTGGGGGCAGCTGCGGCAGGAGGAGCCCCAGCTGGCAGGCAACCTGGCAGGCTTTCTGGCCAAGATGACCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACTCTTGGGCGGCCTCTaGGGGGCCACCTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTLLGGL*GATFTS
Trigger: GCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAG...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp CTCCTTGGCACCACAGTCCTGGAAGAAGGCCTGCAGTTCTGCCGCTaGCTGAGAGGACCAAGACTCTGGCTCTGGGGCCACTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LLGTTVLEEGLQFCR*LRGPRLWLWGHCSA
Trigger: GGCGCTGCAGTGGCCCCAGAGCCAGAGTCTTGGTCCTCTCAGGCAGCGGCAGAACTGCAGGCCTTCTTCCAGGACTGTGGTGCCAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCCAGGAAGCTGAACTaGGCCACCGCCAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTPRKLN*ATARSS
Trigger: CGAGGACCTGGCGGTGGCCAAGTTCAGCTTCCTGGG...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACAAGACCCAGGGCCCTaGTCATCTGGGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: ETRPTAPCQAEHRGTALTQDPGP*SSGSEA
Trigger: GGCCTCAGACCCAGATGACAAGGGCCCTGGGTCTTG...TGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp AGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGACCGCTCTAACACCGAGCGGAGTGAGGCGGGCCTaGTTCTTCTGCGTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: RPTAPCQAEHRGTALTPSGVRRA*FFCVSS
Trigger: ACTGCTCACGCAGAAGAACAAGGCCCGCCTCACTCC...GCTCGGTGTTAGAGCGGTCCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGCAGTTCCTGGGCCAGTaGCTGCCCAGCTTCCACGGA +
Preference number: 5 (lower is better)
Translates to: EIARETRPTAPCQAEHRGQFLGQ*LPSFHG
Trigger: TCCGTGGAAGCTGGGCAGCAACTGGCCCAGGAACTG...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 90 bp TTGGCACCACAGTCCTGGAAGAAGGCCTGCAGTTCTGCCGCTGCCTaGGAGGACCAAGACTCTGGCTCTGGGGCCACTGCAGCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: LAPQSWKKACSSAAA*EDQDSGSGATAAPS
Trigger: TGAAGGCGCTGCAGTGGCCCCAGAGCCAGAGTCTTGGTCCTCTCAGGCAGCGGCAGAACTGCAGGCCTTCTTCCAGGACTGTGGTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 90 bp CTCCAAAGGAATGAGCACTTTGAATGCAGGTGCCACCAGGCTTCCTaGGAGACCCCAGAGGAGGCGGCCCTCGGGTGTGGACCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LQRNEHFECRCHQAS*ETPEEAALGCGPWL
Trigger: GAGCCAGGGTCCACACCCGAGGGCCGCCTCCTCTGGGGTCTCTCAGGAAGCCTGGTGGCACCTGCATTCAAAGTGCTCATTCCTTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp CTACCCAGGACAGGACAGGTGATCAGGAGCAACAGCCGAATCTCTTaGGCGGCCTCTTGGGGGCCACCTTCACCAGCGAGTCCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: LPRTGQVIRSNSRIS*AASWGPPSPASPSG
Trigger: GCCTGAAGGACTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCCTGTCCTGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAACTCTGCCTGGGCGGCTaGGCTGGGCCCACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQLCLGG*AGPTPV
Trigger: CACAGGAGTGGGCCCAGCCAAGCCGCCCAGGCAGAG...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCACCACCCCGTCAGCCTaGCGGAGCAGCTGTCGCGTC +
Preference number: 5 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSTTPSA*RSSCRV
Trigger: GACGCGACAGCTGCTCCGCAAGGCTGACGGGGTGGT...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 90 bp GACAGGAAACCCCATGGGTGTCCATCCTACCCAGGACAGGACAGGTaGTCAGGAGCAACAGCCGAATCTCTTGGGCGGCCTCTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: DRKPHGCPSYPGQDR*SGATAESLGRPLGG
Trigger: GCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCCTGTCCTGGGTAGGATGGACACCCATGGGGTTTCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGCATCAGCTGGCTCTCTaGTCTGCCGCCGCCGGTTGG +
Preference number: 5 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQHQLAL*SAAAGW
Trigger: CCAACCGGCGGCGGCAGACAAGAGAGCCAGCTGATG...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGAGGCGGCTGGTCATCTaGGCCAGAAAGCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QRTGAEGQETPWVSILPRRRLVI*ARKPAR
Trigger: CCTGGCAGGCTTTCTGGCCAAGATGACCAGCCGCCT...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCCAACAGCCGAATCTCTaGGGCGGCCTCTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSQQPNL*GGLLGA
Trigger: GGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTG...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp CCCAGCTTCCCTGGAGTCCATTCCTGGATCTTCAAGCCTGCTCTCTaGCCTTGGTTCCCTGGAGTGAGGCGGGCCTTGTTCTTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: PSFPGVHSWIFKPAL*PWFPGVRRALFFCV
Trigger: CACGCAGAAGAACAAGGCCCGCCTCACTCCAGGGAACCAAGGGCAGAGAGCAGGCTTGAAGATCCAGGAATGGACTCCAGGGAAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp CAGCGCCTTCACCATCAGCTGGCTCTCTTGTCTGCCGCCGCCGGTTaGAGCCCAGCTTCCGGACTTTTCGAGATGTTCTCTGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: QRLHHQLALLSAAAG*SPASGLFEMFSVQS
Trigger: AGACTGGACAGAGAACATCTCGAAAAGTCCGGAAGCTGGGCTCCAACCGGCGGCGGCAGACAAGAGAGCCAGCTGATGGTGAAGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp GGACAGGTGATCAGGAGCAACAGCCGAATCTCTTGGGCGGCCTCTTaGGGGCCACCTTCACCAGCGAGTCCTTCAGGCCTTCTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: GQVIRSNSRISWAAS*GPPSPASPSGLLLA
Trigger: TGCAAGAAGAAGGCCTGAAGGACTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGGGCCTGAGGTGGCTCTaGGGGTCGGGGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAGLRWL*GSGAGS
Trigger: GGAGCCCGCCCCCGACCCCAAGAGCCACCTCAGGCC...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp GCAGATACCCGCTTAGAGGGCAGTGGCTTCCTTCTGCGGAGCCTGTaGGGGCTCTGGCTGGAGCCAAAGATGTTTTTGAGTCCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: ADTRLEGSGFLLRSL*GLWLEPKMFLSPEL
Trigger: CAGCTCTGGACTCAAAAACATCTTTGGCTCCAGCCAGAGCCCCCACAGGCTCCGCAGAAGGAAGCCACTGCCCTCTAAGCGGGTATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGGGAGGGCTGCCAAAGTaGCTCAGTAGCTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQGGLPK*LSSWSQ
Trigger: CTGGGACCAGCTACTGAGCAACTTTGGCAGCCCTCC...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 90 bp AGAGAGTCTTGCTGGGGGAGTTCCGAATGCGCAGTTTCTAGGCCGTaGGCCTCAACCGACTGCTCTGACTGCTCTGAACTGAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RESCWGSSECAVSRP*ASTDCSDCSELRSC
Trigger: GCAGGACCTCAGTTCAGAGCAGTCAGAGCAGTCGGTTGAGGCTCACGGCCTAGAAACTGCGCATTCGGAACTCCCCCAGCAAGACTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp TTCCCTGGAGTCCATTCCTGGATCTTCAAGCCTGCTCTCTGCCCTTaGTTCCCTGGAGTGAGGCGGGCCTTGTTCTTCTGCGTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: FPGVHSWIFKPALCP*FPGVRRALFFCVSS
Trigger: ACTGCTCACGCAGAAGAACAAGGCCCGCCTCACTCCAGGGAACCAAGGGCAGAGAGCAGGCTTGAAGATCCAGGAATGGACTCCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp GCTGTCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATaGGTGTCCATCCTACCCAGGACAGGACAGGTGATCAGGAGCAAC +
Preference number: 5 (lower is better)
Translates to: AVQEQRTGAEGQETP*VSILPRTGQVIRSN
Trigger: GTTGCTCCTGATCACCTGTCCTGTCCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGCAGCTGCCCCCACAGTaGCCAGATTTCCATCTGCTT +
Preference number: 5 (lower is better)
Translates to: QRTGAEGQETPWVSILPRQLPPQ*PDFHLL
Trigger: AAGCAGATGGAAATCTGGCAACTGTGGGGGCAGCTG...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGTGGTCCCAGTCATCGTaGTCCCCAAATAGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQWSQSS*SPNSPG
Trigger: GCCTGGGCTATTTGGGGACAACGATGACTGGGACCA...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAAATAGCGAGGGAGACCAGGCCAACAGCGCCCTGCCAAGCAGAGCACAGAGGGTCCACCAGCAAGGTTTaGACCCGAAAATCTACTCCC +
Preference number: 5 (lower is better)
Translates to: EIARETRPTAPCQAEHRGSTSKV*TRKSTP
Trigger: GGGAGTAGATTTTCGGGTCAAAACCTTGCTGGTGGA...CCCTCTGTGCTCTGCTTGGCAGGGCGCTGTTGGCCTGGTCTCCCTCGCTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp TCCAGGAACAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCAGCTTCCACGGACACTaGCCGTTCCTCCTCACAGTC +
Preference number: 5 (lower is better)
Translates to: SRNKGQELRDRKPHGCPSSFHGH*PFLLTV
Trigger: GACTGTGAGGAGGAACGGCAAGTGTCCGTGGAAGCT...GGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTGTTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CAAAGGACAGGAGCTGAGGGACAGGAAACCCCATGGGTGTCCATCCTACCCAGGCAGCAAAGCCCTCCTTaGGAGTGTGAAAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: QRTGAEGQETPWVSILPRQQSPP*ECERQR
Trigger: CCTCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTG...CCTGGGTAGGATGGACACCCATGGGGTTTCCTGTCCCTCAGCTCCTGTCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp TGCCAGATTTCCATCTGCTTGGGAAGTAAGTGTCCAGTCCCCAGCTaGTCCATGAAGGCAAGGAACGCCTCCTTCTCCTCAGCATCCGCC +
Preference number: 5 (lower is better)
Translates to: CQISICLGSKCPVPS*SMKARNASFSSASA
Trigger: GGCGGATGCTGAGGAGAAGGAGGCGTTCCTTGCCTTCATGGAGCAGCTGGGGACTGGACACTTACTTCCCAAGCAGATGGAAATCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp GGGTCCGGGTCGTGCGGTTCAACAGGCTGCTCTGCTCTAATGTCCTaGTCATGTGGGTCCACTCCTTTATTGTCCTTGGCGCTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: GSGSCGSTGCSALMS*SCGSTPLLSLALKV
Trigger: GACTTTCAGCGCCAAGGACAATAAAGGAGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAACCGCACGACCCGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp TGGCTCCTGGTTGGGGTCCGGGTCGTGCGGTTCAACAGGCTGCTCTaGTCTAATGTCCTGCTCATGTGGGTCCACTCCTTTATTGTCCTT +
Preference number: 5 (lower is better)
Translates to: WLLVGVRVVRFNRLL*SNVLLMWVHSFIVL
Trigger: AAGGACAATAAAGGAGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAACCGCACGACCCGGACCCCAACCAGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp TCTACTCCCACGGTAGCTGTCAATCCGGTGGCGAAAGAATTCTGGTaGAGCAGGTGCAGGAAGGATGTTTTGCCCACGTTGGAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: STPTVAVNPVAKEFW*SRCRKDVLPTLESP
Trigger: GGGAGACTCCAACGTGGGCAAAACATCCTTCCTGCACCTGCTGCACCAGAATTCTTTCGCCACCGGATTGACAGCTACCGTGGGAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp CGCTTAGAGGGCAGTGGCTTCCTTCTGCGGAGCCTGTGGGGGCTCTaGCTGGAGCCAAAGATGTTTTTGAGTCCAGAGCTGAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: RLEGSGFLLRSLWGL*LEPKMFLSPELNSS
Trigger: TGAAGAATTCAGCTCTGGACTCAAAAACATCTTTGGCTCCAGCCAGAGCCCCCACAGGCTCCGCAGAAGGAAGCCACTGCCCTCTAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp GTCGTGCGGTTCAACAGGCTGCTCTGCTCTAATGTCCTGCTCATGTaGGTCCACTCCTTTATTGTCCTTGGCGCTGAAAGTCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: VVRFNRLLCSNVLLM*VHSFIVLGAESHPR
Trigger: CCTGGGGTGACTTTCAGCGCCAAGGACAATAAAGGAGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAACCGCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAACAAAGCCCCTCTCCTaGGCACCACAGTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRTKPLS*APQSWK
Trigger: CTTCCAGGACTGTGGTGCCAAGGAGAGGGGCTTTGT...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGTGCACCTCGCGCTCCTaGGCCTCTAGGACGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GTRFCWEESPCLQIEIARCTSRS*ASRTSC
Trigger: GCAGGACGTCCTAGAGGCCAAGGAGCGCGAGGTGCA...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp TCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTGGGAAGAAGAGGCCTGGATCTGTTaGCTGGACCCAGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: SEAFGTLLFPGTRFCWEEEAWIC*LDPAGA
Trigger: GGCCCCAGCTGGGTCCAGCAAACAGATCCAGGCCTC...TTCTTCCCAGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAAATCTCTGACTCTTCCTaGCTGCCCAGGAAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQISDSS*LPRKLN
Trigger: GTTCAGCTTCCTGGGCAGCAAGGAAGAGTCAGAGAT...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGGATCCGAGTCCTGAGTaGAGAAGGGTTTTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQDPSPE*RRVFLN
Trigger: GTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATC...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 90 bp ACGGTAGCTGTCAATCCGGTGGCGAAAGAATTCTGGTGCAGCAGGTaGAGGAAGGATGTTTTGCCCACGTTGGAGTCTCCCAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: TVAVNPVAKEFWCSR*RKDVLPTLESPRKM
Trigger: CATCTTTCTGGGAGACTCCAACGTGGGCAAAACATCCTTCCTGCACCTGCTGCACCAGAATTCTTTCGCCACCGGATTGACAGCTACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGTCTCCATGGTGCGTaGGCCCTCTCAAAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: PGTRFCWEESPCLQIEIASLHGA*ALSKAP
Trigger: GGGAGCCTTTGAGAGGGCCAACGCACCATGGAGACT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTTGGGAGGAGAGCCCCTaGGAGGTGCCGATTTTCCAG +
Preference number: 5 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSAWEESP*EVPIFQ
Trigger: CTGGAAAATCGGCACCTCCAAGGGGCTCTCCTCCCA...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAATGCAGCACAAAGCACTaGTTGTCCACCAGCAAGGTT +
Preference number: 5 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQCSTKH*LSTSKV
Trigger: AACCTTGCTGGTGGACAACAAGTGCTTTGTGCTGCA...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GCCCTGCTCTGGGATCCGAGTCCTGAGTTGAGAAGGGTTTTCCTGAACCTCCAATCCTCACAGTCCATCTaGTTTCCCAGGAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: ALLWDPSPELRRVFLNLQSSQSI*FPRRRM
Trigger: CATCCTTCTCCTGGGAAACAAGATGGACTGTGAGGA...TTGGAGGTTCAGGAAAACCCTTCTCAACTCAGGACTCGGATCCCAGAGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 90 bp AAATCTACTCCCACGGTAGCTGTCAATCCGGTGGCGAAAGAATTCTaGTGCAGCAGGTGCAGGAAGGATGTTTTGCCCACGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: KSTPTVAVNPVAKEF*CSRCRKDVLPTLES
Trigger: AGACTCCAACGTGGGCAAAACATCCTTCCTGCACCTGCTGCACCAGAATTCTTTCGCCACCGGATTGACAGCTACCGTGGGAGTAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAAAAGGAATGAGCACTTaGAATGCAGGTGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRKGMST*NAGATR
Trigger: CCTGGTGGCACCTGCATTCAAAGTGCTCATTCCTTT...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGCCTGCCCCTCAAGCCTaGTTCACTCAGCAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: GTRFCWEESPCLQIEIARPAPQA*FTQQSP
Trigger: AGGGCTTTGCTGAGTGAACAAGGCTTGAGGGGCAGG...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp ACTGACAACTCAGGCCAAAGCCCTGTGCTTGGGGACACCATGGCATTGGAGCAGGAGCCAAAGATGTTTTaGAGTCCAGAGCTGAATTCT +
Preference number: 5 (lower is better)
Translates to: TDNSGQSPVLGDTMALEQEPKMF*SPELNS
Trigger: AGAATTCAGCTCTGGACTCAAAAACATCTTTGGCTC...CTGCTCCAATGCCATGGTGTCCCCAAGCACAGGGCTTTGGCCTGAGTTGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTTGCAGGAAGGATGTTTaGCCCACGTTGGAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSACRKDV*PTLESP
Trigger: GGGAGACTCCAACGTGGGCAAAACATCCTTCCTGCA...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGAGCATATCAGAGGCCTTaGGAACATTACTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRAYQRP*EHYSSQ
Trigger: CTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGC...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGGGGTCCACTCCTTTATaGTCCTTGGCGCTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAGSTPL*SLALKV
Trigger: GACTTTCAGCGCCAAGGACAATAAAGGAGTGGACCC...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGAACAAGCAGAGAGTCTaGCTGGGGGAGTTCCGAATG +
Preference number: 5 (lower is better)
Translates to: GTRFCWEESPCLQIEIARNKQRV*LGEFRM
Trigger: CATTCGGAACTCCCCCAGCAAGACTCTCTGCTTGTT...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGACTCCTTTATTGTCCTaGGCGCTGAAAGTCACCCCA +
Preference number: 5 (lower is better)
Translates to: PGTRFCWEESPCLQIEIATPLLS*ALKVTP
Trigger: TGGGGTGACTTTCAGCGCCAAGGACAATAAAGGAGT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGGGATGTTTTGCCCACGTaGGAGTCTCCCAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: GTRFCWEESPCLQIEIARDVLPT*ESPRKM
Trigger: CATCTTTCTGGGAGACTCCAACGTGGGCAAAACATC...CCTCGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGTTTGTTTGGAGAGTTTaGCCATACCCCTGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PGTRFCWEESPCLQIEIAFVWRV*PYPCPS
Trigger: TGAGGGGCAGGGGTATGGCAAAACTCTCCAAACAAA...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCCCTCAAGCCTTGTTCACTCAGCAAAGCCCTCCTTTGGAGTGTGAAAGGCAGACTAGACTTTCTTTGTTaGGAGAGTTTTGCCATACCC +
Preference number: 5 (lower is better)
Translates to: PLKPCSLSKALLWSVKGRLDFLC*ESFAIP
Trigger: GGGTATGGCAAAACTCTCCAAACAAAGAAAGTCTAG...TCTGCCTTTCACACTCCAAAGGAGGGCTTTGCTGAGTGAACAAGGCTTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp GAGGCATATCAGAGGCCTTTGGAACATTACTCTTCCCAGGAACCAGATTCTGCTCAGATTTCCATCTGCTaGGGAAGTAAGTGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: EAYQRPLEHYSSQEPDSAQISIC*GSKCPV
Trigger: GACTGGACACTTACTTCCCAAGCAGATGGAAATCTG...AGCAGAATCTGGTTCCTGGGAAGAGTAATGTTCCAAAGGCCTCTGATATGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS-3UTR CAA 90 bp CCAGGAACCAGATTCTGCTGGGAAGAAAGCCCATGCTTGCAAATAGAAATAGCGAGCACAAAGCACTTGTaGTCCACCAGCAAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PGTRFCWEESPCLQIEIASTKHL*STSKVL
Trigger: CAAAACCTTGCTGGTGGACAACAAGTGCTTTGTGCT...CGCTATTTCTATTTGCAAGCATGGGCTTTCTTCCCAGCAGAATCTGGTTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp GTGGCTCTTGGGGTCGGGGGCGGGCTCCAGCAGAGCTaGAGGGCTCCGTGCGGAGGGCTGCCAAAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: VALGVGGGLQQS*RAPCGGLPKLL
Trigger: GAGCAACTTTGGCAGCCCTCCGCACGGAGCCCTGCAGCTCTGCTGGAGCCCGCCCCCGACCCCAAGAGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp GGAGGCGGCCCTCGGGTGTGGACCCTGGCTCCTGGTTaGGGTCCGGGTCGTGCGGTTCAACAGGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: GGGPRVWTLAPG*GPGRAVQQAAL
Trigger: CAGAGCAGCCTGTTGAACCGCACGACCCGGACCCCAACCAGGAGCCAGGGTCCACACCCGAGGGCCGCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp CAGAGGAGGCGGCCCTCGGGTGTGGACCCTGGCTCCTaGTTGGGGTCCGGGTCGTGCGGTTCAACAGGCTGC +
Preference number: 6 (lower is better)
Translates to: QRRRPSGVDPGS*LGSGSCGSTGC
Trigger: GCAGCCTGTTGAACCGCACGACCCGGACCCCAACCAGGAGCCAGGGTCCACACCCGAGGGCCGCCTCCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp GAGACCCCAGAGGAGGCGGCCCTCGGGTGTGGACCCTaGCTCCTGGTTGGGGTCCGGGTCGTGCGGTTCAAC +
Preference number: 6 (lower is better)
Translates to: ETPEEAALGCGP*LLVGVRVVRFN
Trigger: GTTGAACCGCACGACCCGGACCCCAACCAGGAGCCAGGGTCCACACCCGAGGGCCGCCTCCTCTGGGGTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp CGCTGCACCTCGCGCTCCTTGGCCTCTAGGACGTCCTaGATCTGGGAGGTGAGGGCCAGGCCCCGAGAGTCG +
Preference number: 6 (lower is better)
Translates to: RCTSRSLASRTS*IWEVRARPRES
Trigger: CGACTCTCGGGGCCTGGCCCTCACCTCCCAGATGCAGGACGTCCTAGAGGCCAAGGAGCGCGAGGTGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp GTCGGGGGCGGGCTCCAGCAGAGCTGCAGGGCTCCGTaGGGAGGGCTGCCAAAGTTGCTCAGTAGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: VGGGLQQSCRAP*GGLPKLLSSWS
Trigger: GGACCAGCTACTGAGCAACTTTGGCAGCCCTCCGCACGGAGCCCTGCAGCTCTGCTGGAGCCCGCCCCCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp TCACCCGCTCCAGGAAAACTCAGTTTCTCCTCCACCTaGCAGGACACCCGGCCCCTGGCGGCGTCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: SPAPGKLSFSST*QDTRPLAASRR
Trigger: GCGCCTGGACGCCGCCAGGGGCCGGGTGTCCTGGCAGGTGGAGGAGAAACTGAGTTTTCCTGGAGCGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp ACCTCGCGCTCCTTGGCCTCTAGGACGTCCTGCATCTaGGAGGTGAGGGCCAGGCCCCGAGAGTCGCTCTCA +
Preference number: 6 (lower is better)
Translates to: TSRSLASRTSCI*EVRARPRESLS
Trigger: TGAGAGCGACTCTCGGGGCCTGGCCCTCACCTCCCAGATGCAGGACGTCCTAGAGGCCAAGGAGCGCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp GGCCCTCTCAAAGGCTCCCAGTGGAACACACAGCCCTaGGCTCTGGGACCTGGTGGTAGGGTGACTGCTGCC +
Preference number: 6 (lower is better)
Translates to: GPLKGSQWNTQP*ALGPGGRVTAA
Trigger: GGCAGCAGTCACCCTACCACCAGGTCCCAGAGCCCAGGGCTGTGTGTTCCACTGGGAGCCTTTGAGAGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp CTCTGGCCCTCAGCTAGTCGCTGCACCTCGCGCTCCTaGGCCTCTAGGACGTCCTGCATCTGGGAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LWPSASRCTSRS*ASRTSCIWEVR
Trigger: CCTCACCTCCCAGATGCAGGACGTCCTAGAGGCCAAGGAGCGCGAGGTGCAGCGACTAGCTGAGGGCCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp AGGTTGCCTGCCAGCTGGGGCTCCTCCTGCCGCAGCTaGCCCCACAGTTGCCAGATTTCCATCTGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: RLPASWGSSCRS*PHSCQISICLG
Trigger: TCCCAAGCAGATGGAAATCTGGCAACTGTGGGGGCAGCTGCGGCAGGAGGAGCCCCAGCTGGCAGGCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp TTCAAGCCTGCTCTCTGCCCTTGGTTCCCTGGAGTGAGGCGGGCCTaGTTCTTCTGCGTGAGCAGTCGTGAGGGATGGCCTGGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: FKPALCPWFPGVRRA*FFCVSSREGWPGLG
Trigger: GCCCAACCCAGGCCATCCCTCACGACTGCTCACGCAGAAGAACAAGGCCCGCCTCACTCCAGGGAACCAAGGGCAGAGAGCAGGCTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp CCTACCCAGGACAGGACAGGTGATCAGGAGCAACAGCCGAATCTCTaGGGCGGCCTCTTGGGGGCCACCTTCACCAGCGAGTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PTQDRTGDQEQQPNL*GGLLGATFTSESFR
Trigger: CCTGAAGGACTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCCTGTCCTGGGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 72 bp CAGTCCTGGAAGAAGGCCTGCAGTTCTGCCGCTGCCTaGGAGGACCAAGACTCTGGCTCTGGGGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: QSWKKACSSAAA*EDQDSGSGATA
Trigger: TGCAGTGGCCCCAGAGCCAGAGTCTTGGTCCTCTCAGGCAGCGGCAGAACTGCAGGCCTTCTTCCAGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 72 bp AGTGAGGCGGGCCTTGTTCTTCTGCGTGAGCAGTCGTaGGGGATGGCCTGGGTTGGGCTTCCTGCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: SEAGLVLLREQS*GMAWVGLPAQP
Trigger: TGGCTGAGCAGGAAGCCCAACCCAGGCCATCCCTCACGACTGCTCACGCAGAAGAACAAGGCCCGCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp ACTGCAGCGCCTTCACCATCAGCTGGCTCTCTTGTCTaGCGCCGCCGGTTGGAGCCCAGCTTCCGGACTTTT +
Preference number: 6 (lower is better)
Translates to: TAAPSPSAGSLV*RRRLEPSFRTF
Trigger: AAAAGTCCGGAAGCTGGGCTCCAACCGGCGGCGGCAGACAAGAGAGCCAGCTGATGGTGAAGGCGCTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp ACCACAGTCCTGGAAGAAGGCCTGCAGTTCTGCCGCTaGCTGAGAGGACCAAGACTCTGGCTCTGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: TTVLEEGLQFCR*LRGPRLWLWGH
Trigger: GTGGCCCCAGAGCCAGAGTCTTGGTCCTCTCAGGCAGCGGCAGAACTGCAGGCCTTCTTCCAGGACTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp GCTCTCTGCCCTTGGTTCCCTGGAGTGAGGCGGGCCTaGTTCTTCTGCGTGAGCAGTCGTGAGGGATGGCCT +
Preference number: 6 (lower is better)
Translates to: ALCPWFPGVRRA*FFCVSSREGWP
Trigger: AGGCCATCCCTCACGACTGCTCACGCAGAAGAACAAGGCCCGCCTCACTCCAGGGAACCAAGGGCAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp GATCAGGAGCAACAGCCGAATCTCTTGGGCGGCCTCTaGGGGGCCACCTTCACCAGCGAGTCCTTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: DQEQQPNLLGGL*GATFTSESFRP
Trigger: AGGCCTGAAGGACTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp GACAGGACAGGTGATCAGGAGCAACAGCCGAATCTCTaGGGCGGCCTCTTGGGGGCCACCTTCACCAGCGAG +
Preference number: 6 (lower is better)
Translates to: DRTGDQEQQPNL*GGLLGATFTSE
Trigger: CTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp GCAGCGCCTTCACCATCAGCTGGCTCTCTTGTCTGCCGCCGCCGGTaGGAGCCCAGCTTCCGGACTTTTCGAGATGTTCTCTGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: AAPSPSAGSLVCRRR*EPSFRTFRDVLCPV
Trigger: GACTGGACAGAGAACATCTCGAAAAGTCCGGAAGCTGGGCTCCAACCGGCGGCGGCAGACAAGAGAGCCAGCTGATGGTGAAGGCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 72 bp AATGAGCACTTTGAATGCAGGTGCCACCAGGCTTCCTaGGAGACCCCAGAGGAGGCGGCCCTCGGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: NEHFECRCHQAS*ETPEEAALGCG
Trigger: TCCACACCCGAGGGCCGCCTCCTCTGGGGTCTCTCAGGAAGCCTGGTGGCACCTGCATTCAAAGTGCTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 72 bp CCCCATGGGTGTCCATCCTACCCAGGACAGGACAGGTaGTCAGGAGCAACAGCCGAATCTCTTGGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: PHGCPSYPGQDR*SGATAESLGRP
Trigger: AGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCCTGTCCTGGGTAGGATGGACACCCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp TGCCTGAGAGGACCAAGACTCTGGCTCTGGGGCCACTaGAGCGCCTTCACCATCAGCTGGCTCTCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: CLRGPRLWLWGH*SAFTISWLSCL
Trigger: CAGACAAGAGAGCCAGCTGATGGTGAAGGCGCTGCAGTGGCCCCAGAGCCAGAGTCTTGGTCCTCTCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp GCTCCGTGCGGAGGGCTGCCAAAGTTGCTCAGTAGCTaGTCCCAGTCATCGTTGTCCCCAAATAGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: APCGGLPKLLSS*SQSSLSPNSPG
Trigger: GCCTGGGCTATTTGGGGACAACGATGACTGGGACCAGCTACTGAGCAACTTTGGCAGCCCTCCGCACGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp ATCAGGAGCAACAGCCGAATCTCTTGGGCGGCCTCTTaGGGGCCACCTTCACCAGCGAGTCCTTCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: IRSNSRISWAAS*GPPSPASPSGL
Trigger: AAGGCCTGAAGGACTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp ACAGGACAGGTGATCAGGAGCAACAGCCGAATCTCTTaGGCGGCCTCTTGGGGGCCACCTTCACCAGCGAGT +
Preference number: 6 (lower is better)
Translates to: TGQVIRSNSRIS*AASWGPPSPAS
Trigger: ACTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp GGGGGAGGGGGCCCATCCTCCAAAGGAATGAGCACTTaGAATGCAGGTGCCACCAGGCTTCCTGAGAGACCC +
Preference number: 6 (lower is better)
Translates to: GGGGPSSKGMST*NAGATRLPERP
Trigger: GGGTCTCTCAGGAAGCCTGGTGGCACCTGCATTCAAAGTGCTCATTCCTTTGGAGGATGGGCCCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp TTCCGCTCCACATCCACCCAGTCGAAGATCATCTCTGACTCTTCCTaGCTGCCCAGGAAGCTGAACTTGGCCACCGCCAGGTCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: FRSTSTQSKIISDSS*LPRKLNLATARSSR
Trigger: CCGCGAGGACCTGGCGGTGGCCAAGTTCAGCTTCCTGGGCAGCAAGGAAGAGTCAGAGATGATCTTCGACTGGGTGGATGTGGAGCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp CTCTCCTGGGAGGTGATGTCGTACATGAGCACCACCCCGTCAGCCTaGCGGAGCAGCTGTCGCGTCATACTGTGGTACCTCTCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: LSWEVMSYMSTTPSA*RSSCRVILWYLSWP
Trigger: TGGCCAAGAGAGGTACCACAGTATGACGCGACAGCTGCTCCGCAAGGCTGACGGGGTGGTGCTCATGTACGACATCACCTCCCAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp AGGACAGGTGATCAGGAGCAACAGCCGAATCTCTTGGGCGGCCTCTaGGGGGCCACCTTCACCAGCGAGTCCTTCAGGCCTTCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: RTGDQEQQPNLLGGL*GATFTSESFRPSSC
Trigger: GCAAGAAGAAGGCCTGAAGGACTCGCTGGTGAAGGTGGCCCCCAAGAGGCCGCCCAAGAGATTCGGCTGTTGCTCCTGATCACCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp AGCTGGGGCTCCTCCTGCCGCAGCTGCCCCCACAGTTaGCAGATTTCCATCTGCTTGGGAAGTAAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SWGSSCRSCPHS*QISICLGSKCP
Trigger: TGGACACTTACTTCCCAAGCAGATGGAAATCTGGCAACTGTGGGGGCAGCTGCGGCAGGAGGAGCCCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp TCCTGGTTGGGGTCCGGGTCGTGCGGTTCAACAGGCTaGTCTGCTCTAATGTCCTGCTCATGTGGGTCCACT +
Preference number: 6 (lower is better)
Translates to: SWLGSGSCGSTG*SALMSCSCGST
Trigger: AGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAACCGCACGACCCGGACCCCAACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp CACCATCAGCTGGCTCTCTTGTCTGCCGCCGCCGGTTaGAGCCCAGCTTCCGGACTTTTCGAGATGTTCTCT +
Preference number: 6 (lower is better)
Translates to: HHQLALLSAAAG*SPASGLFEMFS
Trigger: AGAGAACATCTCGAAAAGTCCGGAAGCTGGGCTCCAACCGGCGGCGGCAGACAAGAGAGCCAGCTGATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp TCACCATCAGCTGGCTCTCTTGTCTGCCGCCGCCGGTaGGAGCCCAGCTTCCGGACTTTTCGAGATGTTCTC +
Preference number: 6 (lower is better)
Translates to: SPSAGSLVCRRR*EPSFRTFRDVL
Trigger: GAGAACATCTCGAAAAGTCCGGAAGCTGGGCTCCAACCGGCGGCGGCAGACAAGAGAGCCAGCTGATGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp GAGGTGATGTCGTACATGAGCACCACCCCGTCAGCCTaGCGGAGCAGCTGTCGCGTCATACTGTGGTACCTC +
Preference number: 6 (lower is better)
Translates to: EVMSYMSTTPSA*RSSCRVILWYL
Trigger: GAGGTACCACAGTATGACGCGACAGCTGCTCCGCAAGGCTGACGGGGTGGTGCTCATGTACGACATCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp CTTCCCTGGAGTCCATTCCTGGATCTTCAAGCCTGCTCTCTGCCCTaGGTTCCCTGGAGTGAGGCGGGCCTTGTTCTTCTGCGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: LPWSPFLDLQACSLP*VPWSEAGLVLLREQ
Trigger: CTGCTCACGCAGAAGAACAAGGCCCGCCTCACTCCAGGGAACCAAGGGCAGAGAGCAGGCTTGAAGATCCAGGAATGGACTCCAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 90 bp GGCTGCTCTGCTCTAATGTCCTGCTCATGTGGGTCCACTCCTTTATaGTCCTTGGCGCTGAAAGTCACCCCAGGTGGGGTCCTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: GCSALMSCSCGSTPL*SLALKVTPGGVLGA
Trigger: GGCTCCAAGGACCCCACCTGGGGTGACTTTCAGCGCCAAGGACAATAAAGGAGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 72 bp GCTTGGGAAGTAAGTGTCCAGTCCCCAGCTGCTCCATaGAGGCAAGGAACGCCTCCTTCTCCTCAGCATCCG +
Preference number: 6 (lower is better)
Translates to: AWEVSVQSPAAP*RQGTPPSPQHP
Trigger: CGGATGCTGAGGAGAAGGAGGCGTTCCTTGCCTTCATGGAGCAGCTGGGGACTGGACACTTACTTCCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp GTTGGGGTCCGGGTCGTGCGGTTCAACAGGCTGCTCTaGTCTAATGTCCTGCTCATGTGGGTCCACTCCTTT +
Preference number: 6 (lower is better)
Translates to: VGVRVVRFNRLL*SNVLLMWVHSF
Trigger: AAAGGAGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAACCGCACGACCCGGACCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS TCA 72 bp CCTCCTCACAGTCCATCTTGTTTCCCAGGAGAAGGATaGCCACCCCATCCGACCCTGCATCCTGGAGACAGT +
Preference number: 6 (lower is better)
Translates to: PPHSPSCFPGEG*PPHPTLHPGDS
Trigger: ACTGTCTCCAGGATGCAGGGTCGGATGGGGTGGTCATCCTTCTCCTGGGAAACAAGATGGACTGTGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp CCCACGGTAGCTGTCAATCCGGTGGCGAAAGAATTCTaGTGCAGCAGGTGCAGGAAGGATGTTTTGCCCACG +
Preference number: 6 (lower is better)
Translates to: PTVAVNPVAKEF*CSRCRKDVLPT
Trigger: CGTGGGCAAAACATCCTTCCTGCACCTGCTGCACCAGAATTCTTTCGCCACCGGATTGACAGCTACCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp TCCATCTGCTTGGGAAGTAAGTGTCCAGTCCCCAGCTaGTCCATGAAGGCAAGGAACGCCTCCTTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SICLGSKCPVPS*SMKARNASFSS
Trigger: TGAGGAGAAGGAGGCGTTCCTTGCCTTCATGGAGCAGCTGGGGACTGGACACTTACTTCCCAAGCAGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp GTCAATCCGGTGGCGAAAGAATTCTGGTGCAGCAGGTaGAGGAAGGATGTTTTGCCCACGTTGGAGTCTCCC +
Preference number: 6 (lower is better)
Translates to: VNPVAKEFWCSR*RKDVLPTLESP
Trigger: GGGAGACTCCAACGTGGGCAAAACATCCTTCCTGCACCTGCTGCACCAGAATTCTTTCGCCACCGGATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp GCTCTAATGTCCTGCTCATGTGGGTCCACTCCTTTATaGTCCTTGGCGCTGAAAGTCACCCCAGGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: ALMSCSCGSTPL*SLALKVTPGGV
Trigger: GACCCCACCTGGGGTGACTTTCAGCGCCAAGGACAATAAAGGAGTGGACCCACATGAGCAGGACATTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp TCGTGCGGTTCAACAGGCTGCTCTGCTCTAATGTCCTaGTCATGTGGGTCCACTCCTTTATTGTCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: SCGSTGCSALMS*SCGSTPLLSLA
Trigger: CGCCAAGGACAATAAAGGAGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAACCGCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS GCA 72 bp ACGGTAGCTGTCAATCCGGTGGCGAAAGAATTCTGGTaGAGCAGGTGCAGGAAGGATGTTTTGCCCACGTTG +
Preference number: 6 (lower is better)
Translates to: TVAVNPVAKEFW*SRCRKDVLPTL
Trigger: CAACGTGGGCAAAACATCCTTCCTGCACCTGCTGCACCAGAATTCTTTCGCCACCGGATTGACAGCTACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CCA 72 bp TTCAACAGGCTGCTCTGCTCTAATGTCCTGCTCATGTaGGTCCACTCCTTTATTGTCCTTGGCGCTGAAAGT +
Preference number: 6 (lower is better)
Translates to: FNRLLCSNVLLM*VHSFIVLGAES
Trigger: ACTTTCAGCGCCAAGGACAATAAAGGAGTGGACCCACATGAGCAGGACATTAGAGCAGAGCAGCCTGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612677.6
CDS CAA 72 bp TGCAGCACAAAGCACTTGTTGTCCACCAGCAAGGTTTaGACCCGAAAATCTACTCCCACGGTAGCTGTCAAT +
Preference number: 6 (lower is better)
Translates to: CSTKHLLSTSKV*TRKSTPTVAVN
Trigger: ATTGACAGCTACCGTGGGAGTAGATTTTCGGGTCAAAACCTTGCTGGTGGACAACAAGTGCTTTGTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612677.6