Pregenerated sensors for RAB41 (Homo sapiens)
Ensembl gene IDs: ENSG00000147127Ensembl transcript IDs: ENST00000276066.4, ENST00000374473.6, ENST00000509895.5
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGAAAAGGTGGGGAGGAGAACTaGTATGGCAAGCCCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: PRCCKKLPPSSCEMRSGKGGEEN*YGKPKC Trigger: ACATTTGGGCTTGCCATACCAGTTCTCCTCCCCACC...TTTTCCTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGGCAAGAAATCCATCAAATaGGGCAGAGAAAGCCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: ESKWPCIIKRGGEENWYGKKSIK*GRESLS Trigger: GCTTAGGCTTTCTCTGCCTCATTTGATGGATTTCTT...GCCATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTATCATAAAACGAGGTaGGGAGGAGAACTGGTATGG | + |
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Preference number: 2 (lower is better) Translates to: CLLAVGEGKVEFPGAARSYHKTR*GGELVW Trigger: CCATACCAGTTCTCCTCCCCACCTCGTTTTATGATA...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCAAGAAATCCATCAAATaGGGCAGAGAAAGCCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: CLLAVGEGKVEFPGAARSKKSIK*GRESLS Trigger: GCTTAGGCTTTCTCTGCCTCATTTGATGGATTTCTT...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGGAGAATGAATTGTATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGGTAGAATTCCCAGGTaGTGCAAGAAGCTTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: TVENELYWPLKYVSCCRTGRIPR*CKKLPP Trigger: GGGTGGAAGCTTCTTGCAGCACCTGGGAATTCTACC...AGTTCTACAGCAGCTGACATACTTCAAAGGCCAATACAATTCATTCTCCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR-3UTR CCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCGGTGGGGAGGAGAACTaGTATGGCAAGCCCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVGGEEN*YGKPKC Trigger: ACATTTGGGCTTGCCATACCAGTTCTCCTCCCCACC...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR-3UTR GCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCAGAATTCCCAGGTGCTaGAAGAAGCTTCCACCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVRIPRC*KKLPPS Trigger: ACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTCT...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR-3UTR CCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCTATCATAAAACGAGGTaGGGAGGAGAACTGGTATGG | + |
|
Preference number: 2 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVYHKTR*GGELVW Trigger: CCATACCAGTTCTCCTCCCCACCTCGTTTTATGATA...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR CAA 90 bp | GTAGGTAAACAACAACAAACAGTGGAGAATGAATTGTATTGGCCTTaGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: VGKQQQTVENELYWP*KYVSCCRTVFSTDV Trigger: GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATACAATTCATTCTCCACTGTTTGTTGTTGTTTACCTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR CCA 72 bp | TGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTaGTATGGCAAGCCCAAATGTAAGAAATCCATCAAA | + |
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Preference number: 3 (lower is better) Translates to: WPCIIKRGGEEN*YGKPKCKKSIK Trigger: TTTGATGGATTTCTTACATTTGGGCTTGCCATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGATTCCAACAGTTGCCTaGCAGGCGCAGCCGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQIPTVA*QAQPKL Trigger: CAGCTTCGGCTGCGCCTGCCAGGCAACTGTTGGAAT...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | CCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGAAAACTAGGAATTAGGCTGTaGAAGCGCTCCTGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PRCCKKLPPSSCEMRSGKLGIRL*KRSWPA Trigger: AGCTGGCCAGGAGCGCTTTCACAGCCTAATTCCTAG...TTTTCCTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGGTGGGGAGGAGAACTaGTATGGCAAGCCCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQGGEEN*YGKPKC Trigger: ACATTTGGGCTTGCCATACCAGTTCTCCTCCCCACC...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGTCCCATAGCTGCAGCTaGACTATTTGGTCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQSHSCS*TIWSSK Trigger: CTTGGAGGACCAAATAGTTCAGCTGCAGCTATGGGA...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGAGAATTCCCAGGTGCTaGAAGAAGCTTCCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQRIPRC*KKLPPS Trigger: ACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTCT...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCATCCAGGCCTCGTCGTaGCCAAAGGCAGACATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFIQASS*PKADIA Trigger: AGCGATGTCTGCCTTTGGTCACGACGAGGCCTGGAT...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | GAAGAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATATCCAGGCCTCGTCGTaGCCAAAGGCAGACATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EESKWPCIIKRGGEENWYIQASS*PKADIA Trigger: AGCGATGTCTGCCTTTGGTCACGACGAGGCCTGGAT...ATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGAACCACTGCAATAGTTaGATCACGAATGTAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQNHCNS*ITNVAR Trigger: CCTAGCTACATTCGTGATTCAACTATTGCAGTGGTT...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | CCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGAAAAAAGAAATCCATCAAATaGGGCAGAGAAAGCCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRCCKKLPPSSCEMRSGKKKSIK*GRESLS Trigger: GCTTAGGCTTTCTCTGCCTCATTTGATGGATTTCTT...TTTTCCTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGAAGAAATCCATCAAATaGGGCAGAGAAAGCCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQKKSIK*GRESLS Trigger: GCTTAGGCTTTCTCTGCCTCATTTGATGGATTTCTT...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | GAAGAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGTCAATTCCAACAGTTaGCTGGCAGGCGCAGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: EESKWPCIIKRGGEENWYVNSNS*LAGAAE Trigger: TTCGGCTGCGCCTGCCAGGCAACTGTTGGAATTGAC...ATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | CCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGAAAAAACAATAGCTTCTGTTaGCTGACTCCTCGAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: PRCCKKLPPSSCEMRSGKNNSFC*LTPRRI Trigger: AATCCTTCGAGGAGTCAGGCAACAGAAGCTATTGTT...TTTTCCTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCGGTGGGGAGGAGAACTaGTATGGCAAGCCCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFGGEEN*YGKPKC Trigger: ACATTTGGGCTTGCCATACCAGTTCTCCTCCCCACC...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCTCCCATAGCTGCAGCTaGACTATTTGGTCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFSHSCS*TIWSSK Trigger: CTTGGAGGACCAAATAGTTCAGCTGCAGCTATGGGA...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCATAGCTTCTGTTGCCTaGCTCCTCGAAGGATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CLLAVGEGKVEFPGAARSIASVA*LLEGFQ Trigger: CTGGAATCCTTCGAGGAGTCAGGCAACAGAAGCTAT...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | CCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGAAAAAATTGTATTGGCCTTTaGAGTATGTCAGCTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: PRCCKKLPPSSCEMRSGKNCIGL*SMSAAV Trigger: TACAGCAGCTGACATACTTCAAAGGCCAATACAATT...TTTTCCTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | GAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGGCTCGCTTCAGGTAGGTTaGAGCCAAAATGGCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ESKWPCIIKRGGEENWYGSLQVG*SQNGFQ Trigger: TTGGAAGCCATTTTGGCTGCAACCTACCTGAAGCGA...GCCATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCGATGTCTTCCCGCTCTaGTCTCCCAGGAATAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: CLLAVGEGKVEFPGAARSDVFPL*SPRNKS Trigger: ACTCTTATTCCTGGGAGAGCAGAGCGGGAAGACATC...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276066.4 |
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| CDS-3UTR GCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCGTCTTCCCTACGCTCTaGTCTCCCAGGAATAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: CLLAVGEGKVEFPGAARSVFPTL*SPRNKS Trigger: ACTCTTATTCCTGGGAGAGCAGAGCGTAGGGAAGAC...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | GAAGAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATAGGTTGCAGCCAAAATaGCTTCCAACGCTCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: EESKWPCIIKRGGEENWYRLQPK*LPTLSL Trigger: CAGGCTGAGCGTTGGAAGCCATTTTGGCTGCAACCT...ATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGACAAACAGTGGAGAATaGATTGTATTGGCCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQTNSGE*IVLAFE Trigger: TTCAAAGGCCAATACAATTCATTCTCCACTGTTTGT...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTCGCTTCAGGTAGGTTaGAGCCAAAATGGCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CLLAVGEGKVEFPGAARSSLQVG*SQNGFQ Trigger: TTGGAAGCCATTTTGGCTGCAACCTACCTGAAGCGA...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGTTGAAGTATGTCAGCTaGTGTAGAACTGTATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: EFPGAARSFHPVAVRCGQLKYVS*CRTVFS Trigger: AGAGAATACAGTTCTACAGCAGCTGACATACTTCAA...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | GAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGGCGATTTGCACAGAGACTaGTATTCCGTTCTTTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: ESKWPCIIKRGGEENWYGDLHRD*YSVLSA Trigger: TGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATC...GCCATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCGATTTGCACAGAGACTaGTATTCCGTTCTTTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: CLLAVGEGKVEFPGAARSDLHRD*YSVLSA Trigger: TGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATC...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCTATCATAAAACGAGGTaGGGAGGAGAACTGGTATGG | + |
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Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFYHKTR*GGELVW Trigger: CCATACCAGTTCTCCTCCCCACCTCGTTTTATGATA...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCAACCACTGCAATAGTTaGATCACGAATGTAGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: CLLAVGEGKVEFPGAARSNHCNS*ITNVAR Trigger: CCTAGCTACATTCGTGATTCAACTATTGCAGTGGTT...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCGGTAGAATTCCCAGGTaGTGCAAGAAGCTTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVGRIPR*CKKLPP Trigger: GGGTGGAAGCTTCTTGCAGCACCTGGGAATTCTACC...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCAGGTTGCAGCCAAAATaGCTTCCAACGCTCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVRLQPK*LPTLSL Trigger: CAGGCTGAGCGTTGGAAGCCATTTTGGCTGCAACCT...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCATAGCTTCTGTTGCCTaGCTCCTCGAAGGATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVIASVA*LLEGFQ Trigger: CTGGAATCCTTCGAGGAGTCAGGCAACAGAAGCTAT...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCAATTGTATTGGCCTTTaGAGTATGTCAGCTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFNCIGL*SMSAAV Trigger: TACAGCAGCTGACATACTTCAAAGGCCAATACAATT...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCATCGTCACCTCTTTCTaGTCGCACGTGTTCTACCCA | + |
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Preference number: 4 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVIVTSF*SHVFYP Trigger: TGGGTAGAACACGTGCGAGCAGAAAGAGGTGACGAT...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCTTCTTCACCCTGTTCTaGAGTGACTTGTCTTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFFFTLF*SDLSFV Trigger: AACAAAAGACAAGTCACTGCAGAACAGGGTGAAGAA...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCACAAACAGTGGAGAATaGATTGTATTGGCCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFTNSGE*IVLAFE Trigger: TTCAAAGGCCAATACAATTCATTCTCCACTGTTTGT...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCGAGAATGAATTGTATTaGCCTTTGAAGTATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLAVGEGKVEFPGAARSFENELY*PLKYVS Trigger: GCTGACATACTTCAAAGGCCAATACAATTCATTCTC...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR TCA 90 bp | ACAGTGGAGAATGAATTGTATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTCACCCTGTTCTGCAGTaGCTTGTCTTTTGTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVENELYWPLKYVSCCRTHPVLQ*LVFCYP Trigger: TGGATAACAAAAGACAAGTCACTGCAGAACAGGGTG...AGTTCTACAGCAGCTGACATACTTCAAAGGCCAATACAATTCATTCTCCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CCA 90 bp | GAAGAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGAGAATGAATTGTATTaGCCTTTGAAGTATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EESKWPCIIKRGGEENWYENELY*PLKYVS Trigger: GCTGACATACTTCAAAGGCCAATACAATTCATTCTC...ATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | ACAGTGGAGAATGAATTGTATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTAACAATAGCTTCTGTTaGCTGACTCCTCGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TVENELYWPLKYVSCCRTNNSFC*LTPRRI Trigger: AATCCTTCGAGGAGTCAGGCAACAGAAGCTATTGTT...AGTTCTACAGCAGCTGACATACTTCAAAGGCCAATACAATTCATTCTCCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | ACAGTGGAGAATGAATTGTATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTTTCTTCACCCTGTTCTaGAGTGACTTGTCTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVENELYWPLKYVSCCRTFFTLF*SDLSFV Trigger: AACAAAAGACAAGTCACTGCAGAACAGGGTGAAGAA...AGTTCTACAGCAGCTGACATACTTCAAAGGCCAATACAATTCATTCTCCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR GCA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCTTGAAGTATGTCAGCTaGTGTAGAACTGTATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVLKYVS*CRTVFS Trigger: AGAGAATACAGTTCTACAGCAGCTGACATACTTCAA...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| 3UTR CAA 72 bp | CAACAACAAACAGTGGAGAATGAATTGTATTGGCCTTaGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQTVENELYWP*KYVSCCRTVFS Trigger: AGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATACAATTCATTCTCCACTGTTTGTTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS TCA 90 bp | GCAGCCTCCAGACCAAAGCCTCCGGCCTCCATCCAGGCCTCGTCGTaGCCAAAGGCAGACATCGCTTCAGGTAGGTTGCAGCCAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: AASRPKPPASIQASS*PKADIASGRLQPKW Trigger: CCATTTTGGCTGCAACCTACCTGAAGCGATGTCTGCCTTTGGTCACGACGAGGCCTGGATGGAGGCCGGAGGCTTTGGTCTGGAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000276066.4 ENST00000374473.6 ENST00000509895.5 |
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| CDS-3UTR CAA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGCGCAGCCGAAGCTGTaGTACATGAAGCGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EFPGAARSFHPVAVRCGQAQPKL*YMKRLM Trigger: CATCAGCCGCTTCATGTACAACAGCTTCGGCTGCGC...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS CCA 90 bp | CCGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTTGCACAGAGACTaGTATTCCGTTCTTTCGGCAGCCTCCAGACCAAAGCCTCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLCSPRNKSLDLHRD*YSVLSAASRPKPPA Trigger: GGCCGGAGGCTTTGGTCTGGAGGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000509895.5 |
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| CDS CCA 90 bp | ACGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTTGCACAGAGACTaGTATTCCGTTCTTTCGGCAGCCTCCAGACCAAAGCCTCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLCSPRNKSLDLHRD*YSVLSAASRPKPPA Trigger: GGCCGGAGGCTTTGGTCTGGAGGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | GAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGGCAGTCAATTCCAACAGTaGCCTGGCAGGCGCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ESKWPCIIKRGGEENWYGSQFQQ*PGRRSR Trigger: TCGGCTGCGCCTGCCAGGCAACTGTTGGAATTGACT...GCCATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | GAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGGCCAACCGTCCCCTCTTTaGGTGGAGGTGAAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESKWPCIIKRGGEENWYGQPSPL*VEVKSL Trigger: CAAGGACTTCACCTCCACCAAAAGAGGGGACGGTTG...GCCATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCCAACCGTCCCCTCTTTaGGTGGAGGTGAAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLLAVGEGKVEFPGAARSQPSPL*VEVKSL Trigger: CAAGGACTTCACCTCCACCAAAAGAGGGGACGGTTG...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | GAAGAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATATCGCTTCAGGTAGGTaGCAGCCAAAATGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EESKWPCIIKRGGEENWYIASGR*QPKWLP Trigger: TGGAAGCCATTTTGGCTGCAACCTACCTGAAGCGAT...ATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCAGTCAATTCCAACAGTaGCCTGGCAGGCGCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVSQFQQ*PGRRSR Trigger: TCGGCTGCGCCTGCCAGGCAACTGTTGGAATTGACT...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCCTGCAGCTGAACTATTaGGTCCTCCAAGTACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLLAVGEGKVEFPGAARSLQLNY*VLQVHG Trigger: ACCATGTACTTGGAGGACCAAATAGTTCAGCTGCAG...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | GAATTCCCAGGTGCTGCAAGAAGCTTCCACCCAGTAGCTGTGAGATGCGGTCAGGCAGTGACTTGTCTTTaGTTATCCAAATCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EFPGAARSFHPVAVRCGQAVTCL*LSKSIL Trigger: CAAGATTGATTTGGATAACAAAAGACAAGTCACTGC...CTGACCGCATCTCACAGCTACTGGGTGGAAGCTTCTTGCAGCACCTGGGAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | ACAGTGGAGAATGAATTGTATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTATCGCTTCAGGTAGGTaGCAGCCAAAATGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVENELYWPLKYVSCCRTIASGR*QPKWLP Trigger: TGGAAGCCATTTTGGCTGCAACCTACCTGAAGCGAT...AGTTCTACAGCAGCTGACATACTTCAAAGGCCAATACAATTCATTCTCCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | GAAGAGAGTAAGTGGCCATGTATCATAAAACGAGGTGGGGAGGAGAACTGGTATGAATTGTATTGGCCTTaGAAGTATGTCAGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EESKWPCIIKRGGEENWYELYWP*KYVSCC Trigger: ACAGCAGCTGACATACTTCAAAGGCCAATACAATTC...ATACCAGTTCTCCTCCCCACCTCGTTTTATGATACATGGCCACTTACTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | TGTCTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLLAVGEGKVEFPGAARSNKSLD*HRDWYS Trigger: GGAATACCAGTCTCTGTGCAAATCTAAACTCTTATT...GCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | CTTTTAGCTGTCGGAGAAGGTAAGGTAGAATTCCCAGGTGCTGCAAGAAGCTTCAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLAVGEGKVEFPGAARSFNKSLD*HRDWYS Trigger: GGAATACCAGTCTCTGTGCAAATCTAAACTCTTATT...GAAGCTTCTTGCAGCACCTGGGAATTCTACCTTACCTTCTCCGACAGCTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCCTGCAGCTGAACTATTaGGTCCTCCAAGTACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVLQLNY*VLQVHG Trigger: ACCATGTACTTGGAGGACCAAATAGTTCAGCTGCAG...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS-3UTR CAA 90 bp | TATTGGCCTTTGAAGTATGTCAGCTGCTGTAGAACTGTATTCTCTACAGATGTCGAATTGTATTGGCCTTaGAAGTATGTCAGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YWPLKYVSCCRTVFSTDVELYWP*KYVSCC Trigger: ACAGCAGCTGACATACTTCAAAGGCCAATACAATTC...GACATCTGTAGAGAATACAGTTCTACAGCAGCTGACATACTTCAAAGGCCAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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| CDS TCA 72 bp | CCGCCGGACTTCACGCCATGCTCTACTGACGTCGGCTaGCGGCCATTGGCTTCACACCCAGGCCTGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: PPDFTPCSTDVG*RPLASHPGLGM Trigger: CATGCCCAGGCCTGGGTGTGAAGCCAATGGCCGTCAGCCGACGTCAGTAGAGCATGGCGTGAAGTCCGGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509895.5 |
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| CDS TCA 72 bp | AGACCAAAGCCTCCGGCCTCCATCCAGGCCTCGTCGTaGCCAAAGGCAGACATCGCTTCAGGTAGGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPKPPASIQASS*PKADIASGRLQ Trigger: CTGCAACCTACCTGAAGCGATGTCTGCCTTTGGTCACGACGAGGCCTGGATGGAGGCCGGAGGCTTTGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000276066.4 ENST00000374473.6 ENST00000509895.5 |
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| CDS CCA 72 bp | AAGGCAGACATCGCTTCAGGTAGGTTGCAGCCAAAATaGCTTCCAACGCTCAGCCTGAGCCGCCGGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KADIASGRLQPK*LPTLSLSRRTS Trigger: TGAAGTCCGGCGGCTCAGGCTGAGCGTTGGAAGCCATTTTGGCTGCAACCTACCTGAAGCGATGTCTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509895.5 |
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| CDS CAA 72 bp | ATTCCAACAGTTGCCTGGCAGGCGCAGCCGAAGCTGTaGTACATGAAGCGGCTGATGATGGATGTCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: IPTVAWQAQPKL*YMKRLMMDVFP Trigger: CGGGAAGACATCCATCATCAGCCGCTTCATGTACAACAGCTTCGGCTGCGCCTGCCAGGCAACTGTTGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276066.4 |
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| CDS CAA 72 bp | ATTCCAACAGTTGCCTGGCAGGCGCAGCCGAAGCTGTaGTACATGAAGCGGCTGATGATGGATGTCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: IPTVAWQAQPKL*YMKRLMMDVFP Trigger: AGGGAAGACATCCATCATCAGCCGCTTCATGTACAACAGCTTCGGCTGCGCCTGCCAGGCAACTGTTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374473.6 ENST00000509895.5 |
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| CDS CAA 90 bp | CCCAGACCCACACCGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCCGTTCTTTCGGCAGCCTCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: PRPTPLCSPRNKSLD*HRDWYSVLSAASRP Trigger: TGGTCTGGAGGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGGTGTGGGTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509895.5 |
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| CDS GCA 72 bp | CTTTCCCAACGAGGAGGAACTCGGTTCCCCAGAGAATaGCCCACCCCATTTCATACCAATTACACCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LSQRGGTRFPRE*PTPFHTNYTSM Trigger: CATGGAGGTGTAATTGGTATGAAATGGGGTGGGGCATTCTCTGGGGAACCGAGTTCCTCCTCGTTGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509895.5 |
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| CDS CAA 90 bp | ATGGATGTCTTCCCGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCCGTTCTTTCGGCAGCCTCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: MDVFPLCSPRNKSLD*HRDWYSVLSAASRP Trigger: TGGTCTGGAGGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGGGAAGACATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276066.4 |
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| CDS CAA 90 bp | GATGTCTTCCCTACGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCCGTTCTTTCGGCAGCCTCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: DVFPTLCSPRNKSLD*HRDWYSVLSAASRP Trigger: TGGTCTGGAGGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGTAGGGAAGACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374473.6 |
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| CDS CAA 72 bp | TTCCCGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCCGTTCTTTCGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FPLCSPRNKSLD*HRDWYSVLSAA Trigger: GGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276066.4 |
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| CDS CAA 72 bp | CCTACGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCCGTTCTTTCGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTLCSPRNKSLD*HRDWYSVLSAA Trigger: GGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374473.6 |
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| CDS CAA 72 bp | ACACCGCTCTGCTCTCCCAGGAATAAGAGTTTAGATTaGCACAGAGACTGGTATTCCGTTCTTTCGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPLCSPRNKSLD*HRDWYSVLSAA Trigger: GGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCTAAACTCTTATTCCTGGGAGAGCAGAGCGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509895.5 |
||
| CDS TCA 72 bp | AGAAAGCCTAAGCTGTCAACAATAGCTTCTGTTGCCTaGCTCCTCGAAGGATTCCAGTTCGATTTCAACCGT | + |
|
Preference number: 6 (lower is better) Translates to: RKPKLSTIASVA*LLEGFQFDFNR Trigger: ACGGTTGAAATCGAACTGGAATCCTTCGAGGAGTCAGGCAACAGAAGCTATTGTTGACAGCTTAGGCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
||
| CDS CAA 72 bp | TCTGCAGTGACTTGTCTTTTGTTATCCAAATCAATCTaGTTACCCAACAACATGATGACAACATCGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SAVTCLLLSKSI*LPNNMMTTSSP Trigger: AGGTGACGATGTTGTCATCATGTTGTTGGGTAACAAGATTGATTTGGATAACAAAAGACAAGTCACTGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276066.4 ENST00000374473.6 |
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