RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB40C (Homo sapiens)

Ensembl gene IDs: ENSG00000197562

Ensembl transcript IDs: ENST00000248139.8, ENST00000509637.6, ENST00000535977.5, ENST00000538492.5, ENST00000539661.5, ENST00000561781.1, ENST00000563109.1, ENST00000564703.1, ENST00000565511.5, ENST00000569575.5

Found 530 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTGCTGTGGGCAGGCCCAGGCGATGGTGACCGTGCAGAGGGGCTaGTGGGGCAGGCATGGGCAGAAGCACTGGGTGGAGGAGCGGCCA +
Preference number: 1 (lower is better)
Translates to: QCCGQAQAMVTVQRG*WGRHGQKHWVEERP
Trigger: TGGCCGCTCCTCCACCCAGTGCTTCTGCCCATGCCTGCCCCAGCAGCCCCTCTGCACGGTCACCATCGCCTGGGCCTGCCCACAGCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp GGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACCAGTGCACCACCACCGGGCCACACC +
Preference number: 1 (lower is better)
Translates to: GRESPLEESQVRPRS*RGHEVTSAPPPGHT
Trigger: GGTGTGGCCCGGTGGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 90 bp CCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATaGAGTCACCAGTGCACCACCACCGGGCCACACCCAGGCTTCCCT +
Preference number: 1 (lower is better)
Translates to: PSRGVPSASPQLAWP*SHQCTTTGPHPGFP
Trigger: AGGGAAGCCTGGGTGTGGCCCGGTGGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 90 bp TGCCTTGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTGGCCATGAAGTCACCAGTGCACCAC +
Preference number: 1 (lower is better)
Translates to: CLAIAAASPLSRSPK*VPAAGVAMKSPVHH
Trigger: GTGGTGCACTGGTGACTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCAAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 90 bp GGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATaGCTTGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAG +
Preference number: 1 (lower is better)
Translates to: GLWAAPPLAAHEFTG*LAIAAASPLSRSPK
Trigger: CTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp GCGCTTCTGAGGCAGCTGTGTGGACAGTCTCCACGTAGGCGGCACTaGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: ALLRQLCGQSPRRRH*PGVQPGVSSSSPPG
Trigger: GCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTGGAGACTGTCCACACAGCTGCCTCAGAAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp GAGTGCTGCTTGGGCTCTGACCACAGGACCACACCCTCCATCCCGTaGGAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCG +
Preference number: 1 (lower is better)
Translates to: ECCLGSDHRTTPSIP*EPGPRSPKLPEGAP
Trigger: CGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTCCCACGGGATGGAGGGTGTGGTCCTGTGGTCAGAGCCCAAGCAGCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp GGCCCAGGCGATGGTGACCGTGCAGAGGGGCTGCTGGGGCAGGCATaGGCAGAAGCACTGGGTGGAGGAGCGGCCAATGGCTTCAGGAGA +
Preference number: 1 (lower is better)
Translates to: GPGDGDRAEGLLGQA*AEALGGGAANGFRR
Trigger: TCTCCTGAAGCCATTGGCCGCTCCTCCACCCAGTGCTTCTGCCCATGCCTGCCCCAGCAGCCCCTCTGCACGGTCACCATCGCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 90 bp CTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCCGGCGCTTCTaGGGCAGCTGTGTGGACAGTCTCCACGTAGGCGGCACTGGCCTG +
Preference number: 1 (lower is better)
Translates to: LLLAPGSGVRKARRF*GSCVDSLHVGGTGL
Trigger: CAGGCCAGTGCCGCCTACGTGGAGACTGTCCACACAGCTGCCTCAGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 90 bp CCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCTGAGGCAGCTGTGTGGACAGTCTCC +
Preference number: 1 (lower is better)
Translates to: PRLVRACSSSHPAQV*GKPGASEAAVWTVS
Trigger: GGAGACTGTCCACACAGCTGCCTCAGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 90 bp GGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATaGAGGCCACGGCCCTCATCTCCCAGGAACGGGCCATGGGGCGAG +
Preference number: 1 (lower is better)
Translates to: GRAACLGFPYSSGSS*RPRPSSPRNGPWGE
Trigger: CTCGCCCCATGGCCCGTTCCTGGGAGATGAGGGCCGTGGCCTGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp CAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCCCCGGCCTCTaGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATGCCTT +
Preference number: 1 (lower is better)
Translates to: QASRGSTGPVCSPGL*AAPPLAAHEFTGCL
Trigger: AAGGCATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 90 bp ACGGCCCTCATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTaGCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCC +
Preference number: 1 (lower is better)
Translates to: TALISQERAMGRVHW*PVTPSVGPPWEACA
Trigger: GGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATGAGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp GCCACGGCCCTCATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTaGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGT +
Preference number: 1 (lower is better)
Translates to: ATALISQERAMGRVH*CPVTPSVGPPWEAC
Trigger: ACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATGAGGGCCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp AGCAGGAGGCCAGTGTCTTTGGGGGCTGTGGCAGGGCCGCCTGCCTaGGGTTCCCTTACTCATCTGGTAGTTCATGCAGGCCACGGCCCT +
Preference number: 1 (lower is better)
Translates to: SRRPVSLGAVAGPPA*GSLTHLVVHAGHGP
Trigger: AGGGCCGTGGCCTGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp ATAAGAAAGGCCAACCAGGCTCCCCGCCGGTCAAGCCCAGGCAGCTaGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCA +
Preference number: 1 (lower is better)
Translates to: IRKANQAPRRSSPGS*GGPACFRPRFPEAP
Trigger: TGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGCTGCCTGGGCTTGACCGGCGGGGAGCCTGGTTGGCCTTTCTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 90 bp AGGATGGTTCTGATGCCGTGCAACCTCACAGGAGAGCTGCAGCTGTaGGGACCCCAGGGCCAGCGACAGAAGCTGCCGAGAACAGGAGGC +
Preference number: 1 (lower is better)
Translates to: RMVLMPCNLTGELQL*GPQGQRQKLPRTGG
Trigger: GCCTCCTGTTCTCGGCAGCTTCTGTCGCTGGCCCTGGGGTCCCCACAGCTGCAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 90 bp GGTTCCAGGCACGTCCCTAAGAAGGTCAGGATGGTTCTGATGCCGTaGAACCTCACAGGAGAGCTGCAGCTGTGGGGACCCCAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: GSRHVPKKVRMVLMP*NLTGELQLWGPQGQ
Trigger: CTGGCCCTGGGGTCCCCACAGCTGCAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCATCCTGACCTTCTTAGGGACGTGCCTGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 90 bp GACGAGGTGGTTCCAGGCACGTCCCTAAGAAGGTCAGGATGGTTCTaGTGCCGTGCAACCTCACAGGAGAGCTGCAGCTGTGGGGACCCC +
Preference number: 1 (lower is better)
Translates to: DEVVPGTSLRRSGWF*CRATSQESCSCGDP
Trigger: GGGGTCCCCACAGCTGCAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCATCCTGACCTTCTTAGGGACGTGCCTGGAACCACCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 90 bp GCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTaGCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGCACTCTCC +
Preference number: 1 (lower is better)
Translates to: AENRRLHAGARGLHR*PSSIPKSTDSSALS
Trigger: GGAGAGTGCAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTaGACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTG +
Preference number: 1 (lower is better)
Translates to: QKLPRTGGCTQVPGV*TAAHQVFLSLQIAL
Trigger: CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 90 bp AAGTCTACAGATAGCTCTGCACTCTCCAGGGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCA +
Preference number: 1 (lower is better)
Translates to: KSTDSSALSRVGEMI*VLSGQCPRRCHITA
Trigger: TGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCCACCCTGGAGAGTGCAGAGCTATCTGTAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCAGCCCTCCTGGCATCTaGACAGGCGGCCCCGCCCAT +
Preference number: 2 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSSPPGI*TGGPAH
Trigger: ATGGGCGGGGCCGCCTGTGCAGATGCCAGGAGGGCT...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGCCCTCCTGGCATCTaGACAGGCGGCCCCGCCCAT +
Preference number: 2 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVSPPGI*TGGPAH
Trigger: ATGGGCGGGGCCGCCTGTGCAGATGCCAGGAGGGCT...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCCAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 2 (lower is better)
Translates to: CHRGRESPLEESQVRPRSQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTCCCCCTCCTCCCGCCTaGCGCGCTTGGTCCGTGCAT +
Preference number: 2 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTAPPPPA*RAWSVH
Trigger: ATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGG...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCGCTTGGTCCGTGCATaGTCCTCCTCGCACCCGGCT +
Preference number: 2 (lower is better)
Translates to: EPGPRSPKLPEGAPALSARLVRA*SSSHPA
Trigger: AGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCG...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTGCCGCGCTTGGTCCGTaGATGCTCCTCCTCGCACCC +
Preference number: 2 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTAAALGP*MLLLAP
Trigger: GGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGC...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTCAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 2 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTAQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATCCCGCCTGCCGCGCTTaGTCCGTGCATGCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: APPASGQPRHSQRMNSQDPACRA*SVHAPP
Trigger: AGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGG...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTCCCGAGGCCCCCAGGTaGACGTGGACGTGGACGAGG +
Preference number: 2 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRPEAPR*TWTWTR
Trigger: CCTCGTCCACGTCCACGTCCACCTGGGGGCCTCGGG...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGCAGCTGGCGTGGCCATaGAGTCACCAGTGCACCACC +
Preference number: 2 (lower is better)
Translates to: GRAPSACWPCRAARPEDRQLAWP*SHQCTT
Trigger: GGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTG...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCCCCCCTCCTCCCGCCTaGCGCGCTTGGTCCGTGCAT +
Preference number: 2 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRPPPPA*RAWSVH
Trigger: ATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGG...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CAA 90 bp TCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCG +
Preference number: 2 (lower is better)
Translates to: SGQPRHSQRMNSQDA*PSRPRVPSRGVPSA
Trigger: CGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTCAGCTGGCGTGGCCATaGAGTCACCAGTGCACCACC +
Preference number: 2 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTAQLAWP*SHQCTT
Trigger: GGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTG...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGC +
Preference number: 2 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSATRSA*IHRMPC
Trigger: GCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGC...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTTCGTGCCGCACGGCCTaGGGACAGGAGGTAGAGGTG +
Preference number: 2 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRSCRTA*GQEVEV
Trigger: CACCTCTACCTCCTGTCCTCAGGCCGTGCGGCACGA...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCCGAGAACAGGAGGCTaGACGCAGGTGCCCGGGGTC +
Preference number: 2 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLPRTGG*TQVPGV
Trigger: GACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGG...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGGCCAGCGACAGAAGCTaGCGAGAACAGGAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: GRAPSACWPCRAARPEDRASDRS*REQEAA
Trigger: TGCAGCCTCCTGTTCTCGGCAGCTTCTGTCGCTGGC...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCATGCTCCCCCGGCCTCTaGGCAGCCCCGCCACTCGCA +
Preference number: 2 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHACSPGL*AAPPLA
Trigger: TGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCA...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTG +
Preference number: 2 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLSRSPK*VPAAGV
Trigger: CACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGA...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGGGAGGGCTCCTTCTaGGTGCTGGCCATGTCGTGC +
Preference number: 2 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLREGSF*VLAMSC
Trigger: GCACGACATGGCCAGCACGCAGAAGGAGCCCTCCCG...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGGTTCTCATCCCCACGTaGGGAGGGATTTGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: GRAPSACWPCRAARPEDRVLIPT*GGIWGA
Trigger: TGCTCCCCAAATCCCTCCCCACGTGGGGATGAGAAC...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCGCCCCCAGGTGGACGTaGACGTGGACGAGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRAPRWT*TWTRWF
Trigger: GAACCACCTCGTCCACGTCCACGTCCACCTGGGGGC...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAGCCCCCAGGTGGACGTaGACGTGGACGAGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAAPRWT*TWTRWF
Trigger: GAACCACCTCGTCCACGTCCACGTCCACCTGGGGGC...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGC +
Preference number: 2 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTAATRSA*IHRMPC
Trigger: GCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGC...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTCTCCCCTCTCCTGAGTaGTGCTTGGGCTCTGACCAC +
Preference number: 2 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRLPSPE*CLGSDH
Trigger: GTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGGGAG...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGCCAGCGACAGAAGCTaGCGAGAACAGGAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRASDRS*REQEAA
Trigger: TGCAGCCTCCTGTTCTCGGCAGCTTCTGTCGCTGGC...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCTCAAGCCCAGGCAGCTaGGGAGGCCCGGCTTGTTTC +
Preference number: 2 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRSSPGS*GGPACF
Trigger: GAAACAAGCCGGGCCTCCCCAGCTGCCTGGGCTTGA...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCT +
Preference number: 2 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAHPAQV*GKPGAS
Trigger: AGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCTCCCCTCTCCTGAGTaGTGCTTGGGCTCTGACCAC +
Preference number: 2 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLLPSPE*CLGSDH
Trigger: GTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGGGAG...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAAGAGGTGAGCACCAGTaGTGTGGGCAGGCCCAGGCG +
Preference number: 2 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHARGEHQ*CGQAQA
Trigger: CGCCTGGGCCTGCCCACAGCACTGGTGCTCACCTCT...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAGTGCTGCTTGGGCTCTaGCCACAGGACCACACCCTC +
Preference number: 2 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAVLLGL*PQDHTL
Trigger: GAGGGTGTGGTCCTGTGGTCAGAGCCCAAGCAGCAC...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTAGGTCAGGATGGTTCTaGTGCCGTGCAACCTCACAG +
Preference number: 2 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRRSGWF*CRATSQ
Trigger: CTGTGAGGTTGCACGGCATCAGAACCATCCTGACCT...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGCCCCCTCCTCCCGCCTaGCGCGCTTGGTCCGTGCAT +
Preference number: 2 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVPPPPA*RAWSVH
Trigger: ATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGG...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVSTGPV*SPGLWA
Trigger: TGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCT...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCATCAAGCCCAGGCAGCTaGGGAGGCCCGGCTTGTTTC +
Preference number: 2 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHASSPGS*GGPACF
Trigger: GAAACAAGCCGGGCCTCCCCAGCTGCCTGGGCTTGA...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCACTCCTGAGTGCTGCTTaGGCTCTGACCACAGGACCA +
Preference number: 2 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEALLSAA*ALTTGP
Trigger: TGGTCCTGTGGTCAGAGCCCAAGCAGCACTCAGGAG...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCAGGTCAGGATGGTTCTaGTGCCGTGCAACCTCACAG +
Preference number: 2 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLRSGWF*CRATSQ
Trigger: CTGTGAGGTTGCACGGCATCAGAACCATCCTGACCT...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTG +
Preference number: 2 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDSRSPK*VPAAGV
Trigger: CACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGA...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGAACAAAAATGTGGGCTaGCAGGTGCACCTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: GRAPSACWPCRAARPEDRNKNVG*QVHLLS
Trigger: AGAAAGGAGGTGCACCTGGCAGCCCACATTTTTGTT...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCCGGGGTCTGCACCGCTaGCCATCAAGTATTCCTAAG +
Preference number: 2 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRRGLHR*PSSIPK
Trigger: CTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCG...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATACAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 2 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAGGCAGAAGCACTGGGTaGAGGAGCGGCCAATGGCTT +
Preference number: 2 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAGRSTG*RSGQWL
Trigger: AAGCCATTGGCCGCTCCTCCACCCAGTGCTTCTGCC...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGGGAGGCCAGTGTCTTTaGGGGCTGTGGCAGGGCCGC +
Preference number: 2 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVGGQCL*GLWQGR
Trigger: GCGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCC...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp AAGAAGGTCATGCAGTTCTTCTCTGCGTACGCGCGGGCCTGCTCCGTCGGGACCGGTGGGCGCCTTCCATaGTGTCAGAAATGCCGCTTC +
Preference number: 2 (lower is better)
Translates to: KKVMQFFSAYARACSVGTGGRLP*CQKCRF
Trigger: GAAGCGGCATTTCTGACACCATGGAAGGCGCCCACC...GGTCCCGACGGAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATGACCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565511.5
3UTR-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHSTGPV*SPGLWA
Trigger: TGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCT...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACC +
Preference number: 2 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVVRPRS*RGHEVT
Trigger: GGTGACTTCATGGCCACGCCAGCTGCGGGGACGCAC...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAAGGTCAGGATGGTTCTaGTGCCGTGCAACCTCACAG +
Preference number: 2 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHARSGWF*CRATSQ
Trigger: CTGTGAGGTTGCACGGCATCAGAACCATCCTGACCT...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCCCTCCTGGCATCTaGACAGGCGGCCCCGCCCAT +
Preference number: 2 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHSPPGI*TGGPAH
Trigger: ATGGGCGGGGCCGCCTGTGCAGATGCCAGGAGGGCT...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPSTGPV*SPGLWA
Trigger: TGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCT...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSSTGPV*SPGLWA
Trigger: TGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCT...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTAACAAAAATGTGGGCTaGCAGGTGCACCTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRNKNVG*QVHLLS
Trigger: AGAAAGGAGGTGCACCTGGCAGCCCACATTTTTGTT...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGGCTCCTTCTGCGTaGTGGCCATGTCGTGCCGCA +
Preference number: 2 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVRAPSA*WPCRAA
Trigger: TGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCT...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGACCTTGGGAAGCATGTaGCGCGGAGTCCACCACGGG +
Preference number: 2 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVTLGSM*RGVHHG
Trigger: CCCGTGGTGGACTCCGCGGCACATGCTTCCCAAGGT...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGT +
Preference number: 2 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAVGEMI*VLSGQC
Trigger: ACATTGACCACTCAAAACTCAGATCATCTCGCCCAC...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGT +
Preference number: 2 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRVGEMI*VLSGQC
Trigger: ACATTGACCACTCAAAACTCAGATCATCTCGCCCAC...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTG +
Preference number: 2 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHSRSPK*VPAAGV
Trigger: CACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGA...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGCCCTCTCCTGAGTGCTaGTTGGGCTCTGACCACAGG +
Preference number: 2 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVPSPEC*LGSDHR
Trigger: CCTGTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGG...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATATGTGGGCTGCCAGGTaGACCTCCTTTCTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDMWAAR*TSFLPS
Trigger: AGAGGGGAGAAAGGAGGTGCACCTGGCAGCCCACAT...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCCAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 2 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCGAGGCCCCCAGGTaGACGTGGACGTGGACGAGG +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNPEAPR*TWTWTR
Trigger: CCTCGTCCACGTCCACGTCCACCTGGGGGCCTCGGG...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCT +
Preference number: 2 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSHPAQV*GKPGAS
Trigger: AGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTG...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCCGCTTGGTCCGTGCATaGTCCTCCTCGCACCCGGCT +
Preference number: 2 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPRLVRA*SSSHPA
Trigger: AGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCG...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATGCCGCGCTTGGTCCGTaGATGCTCCTCCTCGCACCC +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNAALGP*MLLLAP
Trigger: GGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGC...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACC +
Preference number: 2 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSVRPRS*RGHEVT
Trigger: GGTGACTTCATGGCCACGCCAGCTGCGGGGACGCAC...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACC +
Preference number: 2 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSVRPRS*RGHEVT
Trigger: GGTGACTTCATGGCCACGCCAGCTGCGGGGACGCAC...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATGGAGCAACAAAAATGTaGGCTGCCAGGTGCACCTCC +
Preference number: 2 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDGATKM*AARCTS
Trigger: GGAGGTGCACCTGGCAGCCCACATTTTTGTTGCTCC...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCGCCCCCAGGTGGACGTaGACGTGGACGAGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCAPRWT*TWTRWF
Trigger: GAACCACCTCGTCCACGTCCACGTCCACCTGGGGGC...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCGCTCCTTCTGCGTGCTaGCCATGTCGTGCCGCACGG +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCAPSAC*PCRAAR
Trigger: CCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGC...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCT +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNHPAQV*GKPGAS
Trigger: AGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTG...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCCAGCTGGCGTGGCCATaGAGTCACCAGTGCACCACC +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCQLAWP*SHQCTT
Trigger: GGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTG...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAGTGCTGCTTGGGCTCTaGCCACAGGACCACACCCTC +
Preference number: 2 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSVLLGL*PQDHTL
Trigger: GAGGGTGTGGTCCTGTGGTCAGAGCCCAAGCAGCAC...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCAGGGCTCCTTCTGCGTaGTGGCCATGTCGTGCCGCA +
Preference number: 2 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPRAPSA*WPCRAA
Trigger: TGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCT...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCACCTTGGGAAGCATGTaGCGCGGAGTCCACCACGGG +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCTLGSM*RGVHHG
Trigger: CCCGTGGTGGACTCCGCGGCACATGCTTCCCAAGGT...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACC +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNVRPRS*RGHEVT
Trigger: GGTGACTTCATGGCCACGCCAGCTGCGGGGACGCAC...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCTCCGTGGGACCACCTTaGGAAGCATGTGCCGCGGAG +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCSVGPP*EACAAE
Trigger: CTCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGA...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAATTCACAGGATGCCTTaGCATCGCGGCCGCGAGTCC +
Preference number: 2 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSIHRMP*HRGRES
Trigger: GGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAAT...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCCCCTCTCCTGAGTGCTaGTTGGGCTCTGACCACAGG +
Preference number: 2 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSPSPEC*LGSDHR
Trigger: CCTGTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGG...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCACCCTCTCCTGAGTGCTaGTTGGGCTCTGACCACAGG +
Preference number: 2 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSPSPEC*LGSDHR
Trigger: CCTGTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGG...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCACTCCCCTCTCCTGAGTaGTGCTTGGGCTCTGACCAC +
Preference number: 2 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSLPSPE*CLGSDH
Trigger: GTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGGGAG...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCCTCCCCTCTCCTGAGTaGTGCTTGGGCTCTGACCAC +
Preference number: 2 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPLPSPE*CLGSDH
Trigger: GTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGGGAG...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACCTCCTGAGTGCTGCTTaGGCTCTGACCACAGGACCA +
Preference number: 2 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHLLSAA*ALTTGP
Trigger: TGGTCCTGTGGTCAGAGCCCAAGCAGCACTCAGGAG...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGC +
Preference number: 2 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSATRSA*IHRMPC
Trigger: GCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGC...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATATTCACAGGATGCCTTaGCATCGCGGCCGCGAGTCC +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNIHRMP*HRGRES
Trigger: GGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAAT...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCATGTGGGCTGCCAGGTaGACCTCCTTTCTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPMWAAR*TSFLPS
Trigger: AGAGGGGAGAAAGGAGGTGCACCTGGCAGCCCACAT...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATAGGTGGACGTGGACGTaGACGAGGTGGTTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNRWTWT*TRWFQA
Trigger: TGCCTGGAACCACCTCGTCCACGTCCACGTCCACCT...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCTCCTGAGTGCTGCTTaGGCTCTGACCACAGGACCA +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNLLSAA*ALTTGP
Trigger: TGGTCCTGTGGTCAGAGCCCAAGCAGCACTCAGGAG...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACACACCCAGGCTTCCCTaGAGGCCCCTTAAAAATGTA +
Preference number: 2 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHTPRLP*RPLKNV
Trigger: TACATTTTTAAGGGGCCTTCAGGGAAGCCTGGGTGT...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCTCATCTGGTAGTTCATaGAGGCCACGGCCCTCATCT +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCSSGSS*RPRPSS
Trigger: AGATGAGGGCCGTGGCCTGCATGAACTACCAGATGA...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCACACCCAGGCTTCCCTaGAGGCCCCTTAAAAATGTA +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCTPRLP*RPLKNV
Trigger: TACATTTTTAAGGGGCCTTCAGGGAAGCCTGGGTGT...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR TCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGT +
Preference number: 2 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCVGEMI*VLSGQC
Trigger: ACATTGACCACTCAAAACTCAGATCATCTCGCCCAC...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR GCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATAACAAAAATGTGGGCTaGCAGGTGCACCTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNNKNVG*QVHLLS
Trigger: AGAAAGGAGGTGCACCTGGCAGCCCACATTTTTGTT...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp CCGCGCCCCCTCCTCCCGCCTGCCGCGCTTGGTCCGTaGATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: PRPLLPPAALGP*MLLLAPGSGVR
Trigger: CCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGGCGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp GTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCA +
Preference number: 3 (lower is better)
Translates to: VTQASRGSTGPV*SPGLWAAPPLA
Trigger: TGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGTCCCGCCTGCCGCGCTaGGTCCGTGCATGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GRAPSACWPCRAARPEDRSRLPR*VRACSS
Trigger: GGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGGA...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 72 bp CCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGCCATCGCGGCCGCGAG +
Preference number: 3 (lower is better)
Translates to: PRPLGSPATRSA*IHRMPCHRGRE
Trigger: CTCGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATTCCCGCCTGCCGCGCTaGGTCCGTGCATGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: APPASGQPRHSQRMNSQDSRLPR*VRACSS
Trigger: GGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGGA...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCTCCCGCCTGCCGCGCTaGGTCCGTGCATGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPSRLPR*VRACSS
Trigger: GGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGGA...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 72 bp GCCAACCAGGCTCCCCGCCGGTCAAGCCCAGGCAGCTaGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCG +
Preference number: 3 (lower is better)
Translates to: ANQAPRRSSPGS*GGPACFRPRFP
Trigger: CGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGCTGCCTGGGCTTGACCGGCGGGGAGCCTGGTTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 72 bp AGAGGGAGCACCGGCCCTGTCTGCTCCCCCGGCCTCTaGGCAGCCCCGCCACTCGCAGCGCATGAATTCACA +
Preference number: 3 (lower is better)
Translates to: RGSTGPVCSPGL*AAPPLAAHEFT
Trigger: TGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCTCCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 72 bp GGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATaGAGTCACCAGTGCACCACCACCGGGCCACACCCA +
Preference number: 3 (lower is better)
Translates to: GVPSASPQLAWP*SHQCTTTGPHP
Trigger: TGGGTGTGGCCCGGTGGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp ATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTGGCCATGAAGTCACCA +
Preference number: 3 (lower is better)
Translates to: IAAASPLSRSPK*VPAAGVAMKSP
Trigger: TGGTGACTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp GCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATaGCTTGCCATCGCGGCCGCGAGTCCCCTCTCGAGG +
Preference number: 3 (lower is better)
Translates to: AAPPLAAHEFTG*LAIAAASPLSR
Trigger: CCTCGAGAGGGGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTCTGGGGAGGCCCGGCTaGTTTCCGACCAAGATTCCC +
Preference number: 3 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTALGRPG*FPTKIP
Trigger: GGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAG...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 72 bp GTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCTGAGGCAGCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: VRACSSSHPAQV*GKPGASEAAVW
Trigger: CCACACAGCTGCCTCAGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 72 bp AGGCAGCTGTGTGGACAGTCTCCACGTAGGCGGCACTaGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGC +
Preference number: 3 (lower is better)
Translates to: RQLCGQSPRRRH*PGVQPGVSSSS
Trigger: GCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTGGAGACTGTCCACACAGCTGCCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 72 bp TCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACCAGTGCACCACCACCG +
Preference number: 3 (lower is better)
Translates to: SPLEESQVRPRS*RGHEVTSAPPP
Trigger: CGGTGGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 72 bp CTCATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTaGTGCCCAGTAACACCCTCCGTGGGACCACCTTGG +
Preference number: 3 (lower is better)
Translates to: LISQERAMGRVH*CPVTPSVGPPW
Trigger: CCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCCTGGGGAGGCCCGGCTaGTTTCCGACCAAGATTCCC +
Preference number: 3 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRLGRPG*FPTKIP
Trigger: GGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAG...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp ATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTaGCCAGTAACACCCTCCGTGGGACCACCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: ISQERAMGRVHW*PVTPSVGPPWE
Trigger: TTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 72 bp TCGATCCCATGTGCTGCGCAGGGGAGGACTCAGCTGTaGTGCAACCCCTTCCTGCTCTACGCCAGCTCGCAG +
Preference number: 3 (lower is better)
Translates to: SIPCAAQGRTQL*CNPFLLYASSQ
Trigger: CTGCGAGCTGGCGTAGAGCAGGAAGGGGTTGCATCACAGCTGAGTCCTCCCCTGCGCAGCACATGGGATCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509637.6
3UTR GCA 72 bp GCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATaGAGGCCACGGCCCTCATCTCCCAGGAACGGGCCA +
Preference number: 3 (lower is better)
Translates to: ACLGFPYSSGSS*RPRPSSPRNGP
Trigger: TGGCCCGTTCCTGGGAGATGAGGGCCGTGGCCTGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTC +
Preference number: 3 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHANSQDA*PSRPRV
Trigger: GACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATT...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp CCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTaGACCGCTGCCCATCAAGTATTCCTAAGTCTACAG +
Preference number: 3 (lower is better)
Translates to: PRTGGCTQVPGV*TAAHQVFLSLQ
Trigger: CTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp CACGTCCCTAAGAAGGTCAGGATGGTTCTGATGCCGTaGAACCTCACAGGAGAGCTGCAGCTGTGGGGACCC +
Preference number: 3 (lower is better)
Translates to: HVPKKVRMVLMP*NLTGELQLWGP
Trigger: GGGTCCCCACAGCTGCAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCATCCTGACCTTCTTAGGGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTC +
Preference number: 3 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQINSQDA*PSRPRV
Trigger: GACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATT...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCAGGAGGCCAGTGTCTTaGGGGGCTGTGGCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPRRPVS*GAVAGP
Trigger: CGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCCT...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR GCA 72 bp AGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTaGCCATCAAGTATTCCTAAGTCTACAGATAGCTCT +
Preference number: 3 (lower is better)
Translates to: RRLHAGARGLHR*PSSIPKSTDSS
Trigger: AGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 72 bp GTTCCAGGCACGTCCCTAAGAAGGTCAGGATGGTTCTaGTGCCGTGCAACCTCACAGGAGAGCTGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: VPGTSLRRSGWF*CRATSQESCSC
Trigger: ACAGCTGCAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCATCCTGACCTTCTTAGGGACGTGCCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCTCCGTGGGACCACCTaGGGAAGCATGTGCCGCGGA +
Preference number: 3 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNLRGTT*GSMCRG
Trigger: TCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGAG...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR-3UTR CAA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTC +
Preference number: 3 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSNSQDA*PSRPRV
Trigger: GACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATT...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR TCA 72 bp GATAGCTCTGCACTCTCCAGGGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCAC +
Preference number: 3 (lower is better)
Translates to: DSSALSRVGEMI*VLSGQCPRRCH
Trigger: GTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCCACCCTGGAGAGTGCAGAGCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CCA 72 bp ACTCTCCAGGGTGGGCGAGATGATCTGAGTTTTGAGTaGTCAATGTCCCCGAAGGTGTCACATCACAGCAGG +
Preference number: 3 (lower is better)
Translates to: TLQGGRDDLSFE*SMSPKVSHHSR
Trigger: CCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCCACCCTGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGCTCCCCCGGCCTCTaGGCAGCCCCGCCACTCGCA +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSCSPGL*AAPPLA
Trigger: TGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCA...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCTGCTCCCCCGGCCTCTaGGCAGCCCCGCCACTCGCA +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSCSPGL*AAPPLA
Trigger: TGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCA...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGCCCCCTCCTCCCGCCTaGCGCGCTTGGTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVPPPPA*RAWSVH
Trigger: ATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGG...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCGAGGCTGCACGCAGGTaGCCGGGGTCTGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSEAARR*PGSAPL
Trigger: CAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTC...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGCCCGAGGCCCCCAGGTaGACGTGGACGTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVPEAPR*TWTWTR
Trigger: CCTCGTCCACGTCCACGTCCACCTGGGGGCCTCGGG...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCAGGCCCAGGCGATGGTaGCCGTGCAGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSRPRRW*PCRGAA
Trigger: AGCAGCCCCTCTGCACGGTCACCATCGCCTGGGCCT...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCAGGCCCAGGCGATGGTaGCCGTGCAGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSRPRRW*PCRGAA
Trigger: AGCAGCCCCTCTGCACGGTCACCATCGCCTGGGCCT...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTTTCACCGGACTGCCCTaGGAGCCCATGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSAFTGLP*EPMAAP
Trigger: CGGCGCGGCCATGGGCTCGCAGGGCAGTCCGGTGAA...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCGCCGCGCTTGGTCCGTaGATGCTCCTCCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSAALGP*MLLLAP
Trigger: GGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGC...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCCCCCTCCTCCCGCCTaGCGCGCTTGGTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALPPPPA*RAWSVH
Trigger: ATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGG...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFSTGPV*SPGLWA
Trigger: TGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCT...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCCCCGCCTGCCGCGCTTaGTCCGTGCATGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSPACRA*SVHAPP
Trigger: AGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGG...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTTGCTCCCCCGGCCTCTaGGCAGCCCCGCCACTCGCA +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTACSPGL*AAPPLA
Trigger: TGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCA...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCCGAGGCCCCCAGGTaGACGTGGACGTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSAPEAPR*TWTWTR
Trigger: CCTCGTCCACGTCCACGTCCACCTGGGGGCCTCGGG...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGCCCAGGAACGGGCCATaGGGCGAGTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVPRNGP*GESTGA
Trigger: GGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGG...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCCGAAGCACCGCCGGGTaGGGCCGCGGCGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKARSTAG*GRGVRE
Trigger: CTCTCTCACGCCGCGGCCTCACCCGGCGGTGCTTCG...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248139.8
CDS-3UTR TCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSHPAQV*GKPGAS
Trigger: AGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTG...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCTCGTGCCGCACGGCCTaGGGACAGGAGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSSCRTA*GQEVEV
Trigger: CACCTCTACCTCCTGTCCTCAGGCCGTGCGGCACGA...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGCCGAGGCGATGCGGCTaGGTCCGGGAAACGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVPRRCG*VRETKA
Trigger: GGCTTTCGTTTCCCGGACTCAGCCGCATCGCCTCGG...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535977.5
CDS-3UTR GCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACTTCACCGGACTGCCCTaGGAGCCCATGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHFTGLP*EPMAAP
Trigger: CGGCGCGGCCATGGGCTCGCAGGGCAGTCCGGTGAA...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGCTCTTCACCGGACTaGCCTGCGAGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVSSSPD*PASPWP
Trigger: CGGCCATGGGCTCGCAGGGCAGTCCGGTGAAGAGCT...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTAGCCCTCCTGGCATCTaGACAGGCGGCCCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSASPPGI*TGGPAH
Trigger: ATGGGCGGGGCCGCCTGTGCAGATGCCAGGAGGGCT...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCAGCCCTCCTGGCATCTaGACAGGCGGCCCCGCCCAT +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFSPPGI*TGGPAH
Trigger: ATGGGCGGGGCCGCCTGTGCAGATGCCAGGAGGGCT...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGCGCTTGGTCCGTGCATaGTCCTCCTCGCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVRLVRA*SSSHPA
Trigger: AGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCG...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCCGCTTGGTCCGTGCATaGTCCTCCTCGCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSRLVRA*SSSHPA
Trigger: AGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCG...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCGCCGCGCTTGGTCCGTaGATGCTCCTCCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFAALGP*MLLLAP
Trigger: GGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGC...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTASTGPV*SPGLWA
Trigger: TGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCT...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCCCGAGAACAGGAGGCTaGACGCAGGTGCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFPRTGG*TQVPGV
Trigger: GACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGG...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCAGAGGTGAGCACCAGTaGTGTGGGCAGGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSRGEHQ*CGQAQA
Trigger: CGCCTGGGCCTGCCCACAGCACTGGTGCTCACCTCT...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCGGAGGCCAGTGTCTTTaGGGGCTGTGGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFGGQCL*GLWQGR
Trigger: GCGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCC...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGGGAGGCCAGTGTCTTTaGGGGCTGTGGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRAPSACWPCRAARPEDRGGQCL*GLWQGR
Trigger: GCGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCC...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCAGAGGTCCTGCAGGCTaGACACTCGGTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSRGPAG*TLGWAS
Trigger: GGAGGCCCAACCGAGTGTTCAGCCTGCAGGACCTCT...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCGTGGAAGCTTGTCGATaGGGTGCACGGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSVEACR*GARGCR
Trigger: CCTGCACCCCCGTGCACCTCATCGACAAGCTTCCAC...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFHPAQV*GKPGAS
Trigger: AGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTG...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATAGGCCCAGGCGATGGTaGCCGTGCAGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDRPRRW*PCRGAA
Trigger: AGCAGCCCCTCTGCACGGTCACCATCGCCTGGGCCT...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTTCGTGCCGCACGGCCTaGGGACAGGAGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSASCRTA*GQEVEV
Trigger: CACCTCTACCTCCTGTCCTCAGGCCGTGCGGCACGA...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTGGGCGCCTTCCATGGTGTCAGAAATGCCGCTTCCCCTCCCTCCCCTGGAGCCTTCACCGGACTGCCCTaGGAGCCCATGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: VGAFHGVRNAASPPSPGAFTGLP*EPMAAP
Trigger: CGGCGCGGCCATGGGCTCGCAGGGCAGTCCGGTGAA...GGCTCCAGGGGAGGGAGGGGAAGCGGCATTTCTGACACCATGGAAGGCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCTGCTCCGTCGGGACCTaGCGCTTGAAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALCSVGT*RLKARC
Trigger: GCACCTGGCCTTCAAGCGGCAGGTCCCGACGGAGCA...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACGCCGCGCTTGGTCCGTaGATGCTCCTCCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHAALGP*MLLLAP
Trigger: GGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGC...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACACCCCCTCCTCCCGCCTaGCGCGCTTGGTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTPPPPA*RAWSVH
Trigger: ATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGG...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALSRSPK*VPAAGV
Trigger: CACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGA...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GRAPSACWPCRAARPEDRSRSPK*VPAAGV
Trigger: CACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGA...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCCAGGTGCCCGGGGTCTaGACCGCTGCCCATCAAGTA +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSQVPGV*TAAHQV
Trigger: TACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGAGGCTGCACGCAGGTaGCCGGGGTCTGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLREAARR*PGSAPL
Trigger: CAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTC...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACAGAGGCTGCACGCAGGTaGCCGGGGTCTGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTEAARR*PGSAPL
Trigger: CAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTC...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCAGGGCTCCTTCTGCGTaGTGGCCATGTCGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSRAPSA*WPCRAA
Trigger: TGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCT...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCGGGCGAGTCCACTGGTaGCCAGTAACACCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSGRVHW*PVTPSV
Trigger: CACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGGCAGGCTGTGCCGCCTaGTTCCGCAGAACCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GRAPSACWPCRAARPEDRAGCAA*FRRTLG
Trigger: TCCGAGGGTTCTGCGGAAGCAGGCGGCACAGCCTGC...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535977.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCGCGCCGGCCGCCTCCTaGTTTCCCGGAACCATTGGT +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALAPAAS*FPGTIG
Trigger: ACCAATGGTTCCGGGAAAGCAGGAGGCGGCCGGCGC...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539661.5
CDS-3UTR CCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGCTCCCCCGGCCTCTaGGCAGCCCCGCCACTCGCA +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEACSPGL*AAPPLA
Trigger: TGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCA...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCGCTCCTTCTGCGTGCTaGCCATGTCGTGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALAPSAC*PCRAAR
Trigger: CCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGC...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCGCAGGGCCGCCTGCCTaGGGTTCCCTTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSAGPPA*GSLTHL
Trigger: CAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGC...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTTGTCTTTGGGGGCTGTaGCAGGGCCGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTACLWGL*QGRLPG
Trigger: CCCAGGCAGGCGGCCCTGCCACAGCCCCCAAAGACA...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCGTGGAAGCTTGTCGATaGGGTGCACGGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFVEACR*GARGCR
Trigger: CCTGCACCCCCGTGCACCTCATCGACAAGCTTCCAC...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCAGCTGGCGTGGCCATaGAGTCACCAGTGCACCACC +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALQLAWP*SHQCTT
Trigger: GGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTG...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATTCGTGCCGCACGGCCTaGGGACAGGAGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDSCRTA*GQEVEV
Trigger: CACCTCTACCTCCTGTCCTCAGGCCGTGCGGCACGA...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACTGCTCCGTCGGGACCTaGCGCTTGAAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHCSVGT*RLKARC
Trigger: GCACCTGGCCTTCAAGCGGCAGGTCCCGACGGAGCA...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGCTTGTCGATGAGGTaGACGGGGGTGCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVSLSMR*TGVQET
Trigger: CGTCTCCTGCACCCCCGTGCACCTCATCGACAAGCT...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAAGCACCGGCCCTGTCTaGTCCCCCGGCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEASTGPV*SPGLWA
Trigger: TGCCCAGAGGCCGGGGGAGCAGACAGGGCCGGTGCT...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATCGGGAGGGCTCCTTCTaGGTGCTGGCCATGTCGTGC +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDREGSF*VLAMSC
Trigger: GCACGACATGGCCAGCACGCAGAAGGAGCCCTCCCG...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCCCCAAACAAGGGCCCTaGTGGCAGCAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSPKQGP*WQQQDR
Trigger: CCTGTCCTGTTGCTGCCAGCAGGGCCCTTGTTTGGG...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCGCCCCTCGCAGGCTGTaGCGCCTGCTTCCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPAPRRL*RLLPQN
Trigger: GTTCTGCGGAAGCAGGCGGCACAGCCTGCGAGGGGC...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535977.5
CDS-3UTR CCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCCAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKAQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATGCCCCCAGGTGGACGTaGACGTGGACGAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDAPRWT*TWTRWF
Trigger: GAACCACCTCGTCCACGTCCACGTCCACCTGGGGGC...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGTCCGTGGGACCACCTTaGGAAGCATGTGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GRAPSACWPCRAARPEDRSVGPP*EACAAE
Trigger: CTCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGA...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTTCCGTGGGACCACCTTaGGAAGCATGTGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSASVGPP*EACAAE
Trigger: CTCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGA...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCATGGGGCGAGTCCACTaGTGCCCAGTAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSMGRVH*CPVTPS
Trigger: GGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCAT...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACACCCAGGAACGGGCCATaGGGCGAGTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTPRNGP*GESTGA
Trigger: GGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGG...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGTGTCTTTGGGGGCTGTaGCAGGGCCGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKCLWGL*QGRLPG
Trigger: CCCAGGCAGGCGGCCCTGCCACAGCCCCCAAAGACA...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTTGTCTTTGGGGGCTGTaGCAGGGCCGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRCLWGL*QGRLPG
Trigger: CCCAGGCAGGCGGCCCTGCCACAGCCCCCAAAGACA...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGGGAGGCCAGTGTCTTTaGGGGCTGTGGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKGGQCL*GLWQGR
Trigger: GCGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCC...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGAGGCCAGTGTCTTTaGGGGCTGTGGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRGGQCL*GLWQGR
Trigger: GCGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCC...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCAACGGCCGTGCATCATaGCCGCGTTCATGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFNGRAS*PRSCRW
Trigger: CCAACGGCATGAACGCGGTCATGATGCACGGCCGTT...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCAACGGCCGTGCATCATaGCCGCGTTCATGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALNGRAS*PRSCRW
Trigger: CCAACGGCATGAACGCGGTCATGATGCACGGCCGTT...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTCTACGCCAGCTCGCAGGGGCTCCAGACCAGGGTAGGCGGCAGCTTTTCAGGTGCTCCGTCGGGACCTaGCGCTTGAAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ALRQLAGAPDQGRRQLFRCSVGT*RLKARC
Trigger: GCACCTGGCCTTCAAGCGGCAGGTCCCGACGGAGCA...CCTGAAAAGCTGCCGCCTACCCTGGTCTGGAGCCCCTGCGAGCTGGCGTAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509637.6
CDS-3UTR GCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCCGCTTGGTCCGTGCATaGTCCTCCTCGCACCCGGCT +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKARLVRA*SSSHPA
Trigger: AGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCG...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCGCCGCGCTTGGTCCGTaGATGCTCCTCCTCGCACCC +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRAALGP*MLLLAP
Trigger: GGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGC...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCATTCACAGGATGCCTTaGCATCGCGGCCGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFIHRMP*HRGRES
Trigger: GGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAAT...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCATTCACAGGATGCCTTaGCATCGCGGCCGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALIHRMP*HRGRES
Trigger: GGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAAT...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCCCCTCTCCTGAGTGCTaGTTGGGCTCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFPSPEC*LGSDHR
Trigger: CCTGTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGG...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTCCCCTCTCCTGAGTaGTGCTTGGGCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALLPSPE*CLGSDH
Trigger: GTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGGGAG...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTACCTTGGGAAGCATGTaGCGCGGAGTCCACCACGGG +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTATLGSM*RGVHHG
Trigger: CCCGTGGTGGACTCCGCGGCACATGCTTCCCAAGGT...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACGGGCGAGTCCACTGGTaGCCAGTAACACCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHGRVHW*PVTPSV
Trigger: CACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTGGGCGAGTCCACTGGTaGCCAGTAACACCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTAGRVHW*PVTPSV
Trigger: CACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATTCAAGCCCAGGCAGCTaGGGAGGCCCGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDSSPGS*GGPACF
Trigger: GAAACAAGCCGGGCCTCCCCAGCTGCCTGGGCTTGA...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKAVRPRS*RGHEVT
Trigger: GGTGACTTCATGGCCACGCCAGCTGCGGGGACGCAC...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGCTCCTGAGTGCTGCTTaGGCTCTGACCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVLLSAA*ALTTGP
Trigger: TGGTCCTGTGGTCAGAGCCCAAGCAGCACTCAGGAG...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCAGGTGGACGTGGACGTaGACGAGGTGGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFRWTWT*TRWFQA
Trigger: TGCCTGGAACCACCTCGTCCACGTCCACGTCCACCT...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTAGGTGGACGTGGACGTaGACGAGGTGGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSARWTWT*TRWFQA
Trigger: TGCCTGGAACCACCTCGTCCACGTCCACGTCCACCT...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACAGCCCCCAGGTGGACGTaGACGTGGACGAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTAPRWT*TWTRWF
Trigger: GAACCACCTCGTCCACGTCCACGTCCACCTGGGGGC...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGGGCAGAAGCACTGGGTaGAGGAGCGGCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: GRAPSACWPCRAARPEDRGRSTG*RSGQWL
Trigger: AAGCCATTGGCCGCTCCTCCACCCAGTGCTTCTGCC...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCGCTCCTTCTGCGTGCTaGCCATGTCGTGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPAPSAC*PCRAAR
Trigger: CCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGC...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCACCCAGGAACGGGCCATaGGGCGAGTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAPRNGP*GESTGA
Trigger: GGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGG...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
3UTR CAA 72 bp CCCCGCCACTCGCAGCGCATGAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PRHSQRMNSQDA*PSRPRVPSRGV
Trigger: GACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTAGAGGTCCTGCAGGCTaGACACTCGGTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRRGPAG*TLGWAS
Trigger: GGAGGCCCAACCGAGTGTTCAGCCTGCAGGACCTCT...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCGTGGAAGCTTGTCGATaGGGTGCACGGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPVEACR*GARGCR
Trigger: CCTGCACCCCCGTGCACCTCATCGACAAGCTTCCAC...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFATRSA*IHRMPC
Trigger: GCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGC...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACAGTGCTGCTTGGGCTCTaGCCACAGGACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTVLLGL*PQDHTL
Trigger: GAGGGTGTGGTCCTGTGGTCAGAGCCCAAGCAGCAC...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGGTGCTGCTTGGGCTCTaGCCACAGGACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKVLLGL*PQDHTL
Trigger: GAGGGTGTGGTCCTGTGGTCAGAGCCCAAGCAGCAC...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCAGCTCTTCACCGGACTaGCCTGCGAGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRSSSPD*PASPWP
Trigger: CGGCCATGGGCTCGCAGGGCAGTCCGGTGAAGAGCT...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAAGCTCTTCACCGGACTaGCCTGCGAGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEASSSPD*PASPWP
Trigger: CGGCCATGGGCTCGCAGGGCAGTCCGGTGAAGAGCT...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCGGGACTCCGGGTGCATaGTCATCGATCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSGTPGA*SSISLI
Trigger: GATCAAGGAGATCGATGAGCATGCACCCGGAGTCCC...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCTGCTCCGTCGGGACCTaGCGCTTGAAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLCSVGT*RLKARC
Trigger: GCACCTGGCCTTCAAGCGGCAGGTCCCGACGGAGCA...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCATCTTCTCCATGCCGTaGCGCATGAGCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALIFSMP*RMSTMR
Trigger: CCGCATCGTGCTCATGCGGCACGGCATGGAGAAGAT...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATAGCTTGTCGATGAGGTaGACGGGGGTGCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDSLSMR*TGVQET
Trigger: CGTCTCCTGCACCCCCGTGCACCTCATCGACAAGCT...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACATTCACAGGATGCCTTaGCATCGCGGCCGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHIHRMP*HRGRES
Trigger: GGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAAT...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGCATGAATTCACAGGATaGCTTGCCATCGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GRAPSACWPCRAARPEDRHEFTG*LAIAAA
Trigger: CGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATG...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTATGTGGGCTGCCAGGTaGACCTCCTTTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSAMWAAR*TSFLPS
Trigger: AGAGGGGAGAAAGGAGGTGCACCTGGCAGCCCACAT...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAGAGGCTGCACGCAGGTaGCCGGGGTCTGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAEAARR*PGSAPL
Trigger: CAGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTC...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCACCTCACAGGAGAGCTaGAGCTGTGGGGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPTSQES*SCGDPR
Trigger: CCTGGGGTCCCCACAGCTGCAGCTCTCCTGTGAGGT...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAAGAGGTGAGCACCAGTaGTGTGGGCAGGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEARGEHQ*CGQAQA
Trigger: CGCCTGGGCCTGCCCACAGCACTGGTGCTCACCTCT...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCAGGGCTCCTTCTGCGTaGTGGCCATGTCGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPRAPSA*WPCRAA
Trigger: TGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCT...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTACCTTGGGAAGCATGTaGCGCGGAGTCCACCACGGG +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRTLGSM*RGVHHG
Trigger: CCCGTGGTGGACTCCGCGGCACATGCTTCCCAAGGT...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCGGGCGAGTCCACTGGTaGCCAGTAACACCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKAGRVHW*PVTPSV
Trigger: CACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCGATGGTGACGGGCAGTaGAAGCTTGTCGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: CHRGRESPLEESQVRPRSDGDGQ*KLVDEV
Trigger: CACCTCATCGACAAGCTTCCACTGCCCGTCACCATC...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCGAGAAGGACTTGAGGTaGCTCTTGATGGTGACGGGC +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSEKDLR*LLMVTG
Trigger: GCCCGTCACCATCAAGAGCCACCTCAAGTCCTTCTC...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCGTGCGTCCCCGCAGCTaGCGTGGCCATGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLVRPRS*RGHEVT
Trigger: GGTGACTTCATGGCCACGCCAGCTGCGGGGACGCAC...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCGTTCTCATCCCCACGTaGGGAGGGATTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFVLIPT*GGIWGA
Trigger: TGCTCCCCAAATCCCTCCCCACGTGGGGATGAGAAC...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTAGGTGGACGTGGACGTaGACGAGGTGGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTARWTWT*TRWFQA
Trigger: TGCCTGGAACCACCTCGTCCACGTCCACGTCCACCT...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACCCGAGGCCCCCAGGTaGACGTGGACGTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAPEAPR*TWTWTR
Trigger: CCTCGTCCACGTCCACGTCCACCTGGGGGCCTCGGG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACGGCAGAAGCACTGGGTaGAGGAGCGGCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHGRSTG*RSGQWL
Trigger: AAGCCATTGGCCGCTCCTCCACCCAGTGCTTCTGCC...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGGCAGGGCCGCCTGCCTaGGGTTCCCTTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKAGPPA*GSLTHL
Trigger: CAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGC...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGCAGGGCCGCCTGCCTaGGGTTCCCTTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRAGPPA*GSLTHL
Trigger: CAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGC...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GTGGGCGCCTTCCATGGTGTCAGAAATGCCGCTTCCCCTCCCTCCCCTGGAGCCACCAAGAGGATCCCCTaGCAGGACTGCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VGAFHGVRNAASPPSPGATKRIP*QDCSRG
Trigger: CCCCCTGCTGCAGTCCTGCCAGGGGATCCTCTTGGT...GGCTCCAGGGGAGGGAGGGGAAGCGGCATTTCTGACACCATGGAAGGCGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR TCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATTGGACTTGGACCTCTTaGGGCTGTTGCCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDWTWTS*GCCPCC
Trigger: GCAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCA...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHATRSA*IHRMPC
Trigger: GCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGC...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAAGGCCCAGGCGATGGTaGCCGTGCAGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHARPRRW*PCRGAA
Trigger: AGCAGCCCCTCTGCACGGTCACCATCGCCTGGGCCT...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCGCCTGCCGCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGGTAGTGTTGATGCCGTaGATGCAGGACCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: PPAALGPCMLLLAPGSGVVVLMP*MQDHPG
Trigger: ACCTGGATGGTCCTGCATTCACGGCATCAACACTAC...CACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCCGGCAGCAGAGGTCCTaGAGGCTGAACACTCGGTTG +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPRQQRS*RLNTRL
Trigger: CAACCGAGTGTTCAGCCTGCAGGACCTCTGCTGCCG...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACCATGAATTCACAGGATaGCTTGCCATCGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHHEFTG*LAIAAA
Trigger: CGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATG...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCCCCTCTCCTGAGTGCTaGTTGGGCTCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPPSPEC*LGSDHR
Trigger: CCTGTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGG...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCGGGGTCTGCACCGCTaGCCATCAAGTATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSARGLHR*PSSIPK
Trigger: CTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCG...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCAGGTGCCCGGGGTCTaGACCGCTGCCCATCAAGTA +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLQVPGV*TAAHQV
Trigger: TACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCACAGGTGCCCGGGGTCTaGACCGCTGCCCATCAAGTA +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAQVPGV*TAAHQV
Trigger: TACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACCGAGAACAGGAGGCTaGACGCAGGTGCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAPRTGG*TQVPGV
Trigger: GACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCGCCAGCGACAGAAGCTaGCGAGAACAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKAASDRS*REQEAA
Trigger: TGCAGCCTCCTGTTCTCGGCAGCTTCTGTCGCTGGC...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTCTACGCCAGCTCGCAGGGGCTCCAGACCAGGGTAGGCGGCAGCTTTTCAGGGGATGCAACCCCTTCCTaGTCTACGCCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LYASSQGLQTRVGGSFSGDATPS*STPARR
Trigger: CCTGCGAGCTGGCGTAGAGCAGGAAGGGGTTGCATC...CCCTGAAAAGCTGCCGCCTACCCTGGTCTGGAGCCCCTGCGAGCTGGCGTAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509637.6
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCGATCATTCCCTTCCCTaGGGCTGCCTCCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALDHSLP*GCLPEK
Trigger: TTTCTCTGGGAGGCAGCCGCAGGGAAGGGAATGATC...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539661.5
CDS-3UTR CCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCGATGGTGACGGGCAGTaGAAGCTTGTCGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFDGDGQ*KLVDEV
Trigger: CACCTCATCGACAAGCTTCCACTGCCCGTCACCATC...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACCCGCCTGCCGCGCTTaGTCCGTGCATGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAPACRA*SVHAPP
Trigger: AGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTCTCCTGAGTGCTGCTTaGGCTCTGACCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTALLSAA*ALTTGP
Trigger: TGGTCCTGTGGTCAGAGCCCAAGCAGCACTCAGGAG...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCGGAGCAACAAAAATGTaGGCTGCCAGGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALGATKM*AARCTS
Trigger: GGAGGTGCACCTGGCAGCCCACATTTTTGTTGCTCC...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGAGGTGGACGTGGACGTaGACGAGGTGGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKRWTWT*TRWFQA
Trigger: TGCCTGGAACCACCTCGTCCACGTCCACGTCCACCT...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATCCGTGGGACCACCTTaGGAAGCATGTGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEASVGPP*EACAAE
Trigger: CTCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGA...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCGCAGGGCCGCCTGCCTaGGGTTCCCTTACTCATCTG +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLAGPPA*GSLTHL
Trigger: CAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGC...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCAGGACCAGCGGTTGGTaGTGTCATACACCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFRTSGW*CHTPRG
Trigger: TCCTCTTGGTGTATGACATCACCAACCGCTGGTCCT...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCAACGGCCGTGCATCATaGCCGCGTTCATGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLNGRAS*PRSCRW
Trigger: CCAACGGCATGAACGCGGTCATGATGCACGGCCGTT...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACATGGACTTGGACCTCTTaGGGCTGTTGCCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTWTWTS*GCCPCC
Trigger: GCAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCA...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKATRSA*IHRMPC
Trigger: GCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGC...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGCCACTCGCAGCGCATaGATTCACAGGATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRATRSA*IHRMPC
Trigger: GCAAGGCATCCTGTGAATTCATGCGCTGCGAGTGGC...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTGTAGTGTTGATGCCGTaGATGCAGGACCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSAVVLMP*MQDHPG
Trigger: ACCTGGATGGTCCTGCATTCACGGCATCAACACTAC...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATTTCACCGGACTGCCCTaGGAGCCCATGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDFTGLP*EPMAAP
Trigger: CGGCGCGGCCATGGGCTCGCAGGGCAGTCCGGTGAA...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCACATGCAGTTCTTCTCTaGGTACGCGCGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAHAVLL*VRAGLL
Trigger: GAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATG...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACAATCTTCTCCATGCCGTaGCGCATGAGCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTIFSMP*RMSTMR
Trigger: CCGCATCGTGCTCATGCGGCACGGCATGGAGAAGAT...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCCGGCAGCAGAGGTCCTaGAGGCTGAACACTCGGTTG +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRRQQRS*RLNTRL
Trigger: CAACCGAGTGTTCAGCCTGCAGGACCTCTGCTGCCG...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAATTCACAGGATGCCTTaGCATCGCGGCCGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAIHRMP*HRGRES
Trigger: GGACTCGCGGCCGCGATGGCAAGGCATCCTGTGAAT...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCCCCTCTCCTGAGTGCTaGTTGGGCTCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRPSPEC*LGSDHR
Trigger: CCTGTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGG...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCACCCTCTCCTGAGTGCTaGTTGGGCTCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAPSPEC*LGSDHR
Trigger: CCTGTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGG...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCATGTGGGCTGCCAGGTaGACCTCCTTTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPMWAAR*TSFLPS
Trigger: AGAGGGGAGAAAGGAGGTGCACCTGGCAGCCCACAT...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTATGGTTCTGATGCCGTaGAACCTCACAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSAMVLMP*NLTGEL
Trigger: CAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCAT...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACGGGAGGGCTCCTTCTaGGTGCTGGCCATGTCGTGC +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAREGSF*VLAMSC
Trigger: GCACGACATGGCCAGCACGCAGAAGGAGCCCTCCCG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCTCATCTGGTAGTTCATaGAGGCCACGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: HVGGTGLASSQECPARALSSGSS*RPRPSS
Trigger: AGATGAGGGCCGTGGCCTGCATGAACTACCAGATGA...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCACCCAAACAAGGGCCCTaGTGGCAGCAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAPKQGP*WQQQDR
Trigger: CCTGTCCTGTTGCTGCCAGCAGGGCCCTTGTTTGGG...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTCTACGCCAGCTCGCAGGGGCTCCAGACCAGGGTAGGCGGCAGCTTTTCAGGGTAGTCGATCCCATGTaGTGCGCAGGGGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: ALRQLAGAPDQGRRQLFRVVDPM*CAGEDS
Trigger: TGAGTCCTCCCCTGCGCAGCACATGGGATCGACTAC...CCTGAAAAGCTGCCGCCTACCCTGGTCTGGAGCCCCTGCGAGCTGGCGTAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509637.6
CDS-3UTR GCA 90 bp GGACCAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGTCCTGGGCAGGCAGATaGGGGGTTCTGGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GPAVGDVIHQEDPLAGLQSWAGR*GVLAAG
Trigger: CCCGGCTGCCAGAACCCCGCATCTGCCTGCCCAGGA...CTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR CCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACACTCCTGAGTGCTGCTTaGGCTCTGACCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTLLSAA*ALTTGP
Trigger: TGGTCCTGTGGTCAGAGCCCAAGCAGCACTCAGGAG...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGGTTCTCATCCCCACGTaGGGAGGGATTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKVLIPT*GGIWGA
Trigger: TGCTCCCCAAATCCCTCCCCACGTGGGGATGAGAAC...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCGGCAGAAGCACTGGGTaGAGGAGCGGCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLGRSTG*RSGQWL
Trigger: AAGCCATTGGCCGCTCCTCCACCCAGTGCTTCTGCC...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCGGCAGAAGCACTGGGTaGAGGAGCGGCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRGRSTG*RSGQWL
Trigger: AAGCCATTGGCCGCTCCTCCACCCAGTGCTTCTGCC...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GGACCAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGGCAGATGCGGGGTTCTaGCAGCCGGGGGACGTGCAG +
Preference number: 4 (lower is better)
Translates to: GPAVGDVIHQEDPLAGLQADAGF*QPGDVQ
Trigger: CTGCACGTCCCCCGGCTGCCAGAACCCCGCATCTGC...CTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR CCA 90 bp GTGGGCGCCTTCCATGGTGTCAGAAATGCCGCTTCCCCTCCCTCCCCTGGAGCCGGTGGGCGCCTTCCATaGTGTCAGAAATGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VGAFHGVRNAASPPSPGAGGRLP*CQKCRF
Trigger: GAAGCGGCATTTCTGACACCATGGAAGGCGCCCACC...GGCTCCAGGGGAGGGAGGGGAAGCGGCATTTCTGACACCATGGAAGGCGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR TCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCTGGACTTGGACCTCTTaGGGCTGTTGCCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRWTWTS*GCCPCC
Trigger: GCAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCA...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGAGGTCAGGATGGTTCTaGTGCCGTGCAACCTCACAG +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKRSGWF*CRATSQ
Trigger: CTGTGAGGTTGCACGGCATCAGAACCATCCTGACCT...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGACCAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGAGCTCTTCACCGGACTaGCCTGCGAGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GPAVGDVIHQEDPLAGLQSSSPD*PASPWP
Trigger: CGGCCATGGGCTCGCAGGGCAGTCCGGTGAAGAGCT...CTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR GCA 90 bp GCTCTACGCCAGCTCGCAGGGGCTCCAGACCAGGGTAGGCGGCAGCTTTTCAGGGGGACTCCGGGTGCATaGTCATCGATCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: ALRQLAGAPDQGRRQLFRGTPGA*SSISLI
Trigger: GATCAAGGAGATCGATGAGCATGCACCCGGAGTCCC...CCTGAAAAGCTGCCGCCTACCCTGGTCTGGAGCCCCTGCGAGCTGGCGTAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509637.6
CDS-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACTCCGGGTGCATaGTCATCGATCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRGTPGA*SSISLI
Trigger: GATCAAGGAGATCGATGAGCATGCACCCGGAGTCCC...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGCAGGTGCTCCGTCGGGACCTaGCGCTTGAAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QRLVMSYTKRIPWQDCSRCSVGT*RLKARC
Trigger: GCACCTGGCCTTCAAGCGGCAGGTCCCGACGGAGCA...CCTGCTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR GCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGCCCGCTAGGAGATCTTaGAGTTACTCCGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKPARRS*SYSASS
Trigger: ACTGCTCGCGGAGTAACTGCAAGATCTCCTAGCGGG...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCACATGAATTCACAGGATaGCTTGCCATCGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAHEFTG*LAIAAA
Trigger: CGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATG...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGCGGGGTCTGCACCGCTaGCCATCAAGTATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKRGLHR*PSSIPK
Trigger: CTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCG...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAACCTCACAGGAGAGCTaGAGCTGTGGGGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHATSQES*SCGDPR
Trigger: CCTGGGGTCCCCACAGCTGCAGCTCTCCTGTGAGGT...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGGGAGCAACAAAAATGTaGGCTGCCAGGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKGATKM*AARCTS
Trigger: GGAGGTGCACCTGGCAGCCCACATTTTTGTTGCTCC...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCGGAGCAACAAAAATGTaGGCTGCCAGGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKAGATKM*AARCTS
Trigger: GGAGGTGCACCTGGCAGCCCACATTTTTGTTGCTCC...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCGTTCTCATCCCCACGTaGGGAGGGATTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRVLIPT*GGIWGA
Trigger: TGCTCCCCAAATCCCTCCCCACGTGGGGATGAGAAC...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATACCCGAGGCCCCCAGGTaGACGTGGACGTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIPEAPR*TWTWTR
Trigger: CCTCGTCCACGTCCACGTCCACCTGGGGGCCTCGGG...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CTGAGCGCCCCTGGAGTAGGACCTGAAGATGGTGCAGAACCGGCCCTGGCCCGAAGGACCAGCGGTTGGTaGTGTCATACACCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSAPGVGPEDGAEPALARRTSGW*CHTPRG
Trigger: TCCTCTTGGTGTATGACATCACCAACCGCTGGTCCT...TCGGGCCAGGGCCGGTTCTGCACCATCTTCAGGTCCTACTCCAGGGGCGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509637.6
CDS-3UTR TCA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATACACCCAGGCTTCCCTaGAGGCCCCTTAAAAATGTA +
Preference number: 4 (lower is better)
Translates to: APPASGQPRHSQRMNSQDTPRLP*RPLKNV
Trigger: TACATTTTTAAGGGGCCTTCAGGGAAGCCTGGGTGT...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCTGTCTGCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: PVCSPGLWAAPPLAAHEFVGEMI*VLSGQC
Trigger: ACATTGACCACTCAAAACTCAGATCATCTCGCCCAC...GAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGCAGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCGGTCCTCAAAGTCTGTaGGGTTTGTTCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSGPQSL*GLFIIP
Trigger: TGGGATTATGAACAAACCTCACAGACTTTGAGGACC...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACAGTAGTGTTGATGCCGTaGATGCAGGACCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTVVLMP*MQDHPG
Trigger: ACCTGGATGGTCCTGCATTCACGGCATCAACACTAC...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCGGGACTCCGGGTGCATaGTCATCGATCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLGTPGA*SSISLI
Trigger: GATCAAGGAGATCGATGAGCATGCACCCGGAGTCCC...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATTGCTCCGTCGGGACCTaGCGCTTGAAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDCSVGT*RLKARC
Trigger: GCACCTGGCCTTCAAGCGGCAGGTCCCGACGGAGCA...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACTCCCCTCTCCTGAGTaGTGCTTGGGCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHALPSPE*CLGSDH
Trigger: GTGGTCAGAGCCCAAGCAGCACTCAGGAGAGGGGAG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTAACAAAAATGTGGGCTaGCAGGTGCACCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: EPGPRSPKLPEGAPALSANKNVG*QVHLLS
Trigger: AGAAAGGAGGTGCACCTGGCAGCCCACATTTTTGTT...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGGGGTCTGCACCGCTaGCCATCAAGTATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLRGLHR*PSSIPK
Trigger: CTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCG...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTATGGTTCTGATGCCGTaGAACCTCACAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRMVLMP*NLTGEL
Trigger: CAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCAT...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp AGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCTGGCGTGGCCATGAAGATGGTTCTGATGCCGTaGAACCTCACAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPLSRSPKCVPAAGVAMKMVLMP*NLTGEL
Trigger: CAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCAT...CTTCATGGCCACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTTCATCTGGTAGTTCATaGAGGCCACGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRSSGSS*RPRPSS
Trigger: AGATGAGGGCCGTGGCCTGCATGAACTACCAGATGA...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACCCAAACAAGGGCCCTaGTGGCAGCAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAPKQGP*WQQQDR
Trigger: CCTGTCCTGTTGCTGCCAGCAGGGCCCTTGTTTGGG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCGATGGTGACGGGCAGTaGAAGCTTGTCGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRDGDGQ*KLVDEV
Trigger: CACCTCATCGACAAGCTTCCACTGCCCGTCACCATC...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGCAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGCCCGCCTGCCGCGCTTaGTCCGTGCATGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALPACRA*SVHAPP
Trigger: AGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGG...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGTGTCTTTGGGGGCTGTaGCAGGGCCGCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALCLWGL*QGRLPG
Trigger: CCCAGGCAGGCGGCCCTGCCACAGCCCCCAAAGACA...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp AAGAAGGTCATGCAGTTCTTCTCTGCGTACGCGCGGGCCTGCTCCGTCGGGACCGGAGCCATCAGCCTGTaGAAGTTTCCTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KKVMQFFSAYARACSVGTGAISL*KFPGQA
Trigger: TGCCTGCCCAGGAAACTTCCACAGGCTGATGGCTCC...GGTCCCGACGGAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATGACCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR TCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATCCATGCCGTGCCGCATaGGCACGATGCGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDPCRAA*ARCGIA
Trigger: AGCTATCCCGCATCGTGCTCATGCGGCACGGCATGG...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHVGEMI*VLSGQC
Trigger: ACATTGACCACTCAAAACTCAGATCATCTCGCCCAC...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGACCAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGCATGCAGTTCTTCTCTaGGTACGCGCGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPAVGDVIHQEDPLAGLQHAVLL*VRAGLL
Trigger: GAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATG...CTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACCCCCCTCCTCCCGCCTaGCGCGCTTGGTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHPPPPA*RAWSVH
Trigger: ATGCACGGACCAAGCGCGGCAGGCGGGAGGAGGGGG...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACATGAATTCACAGGATaGCTTGCCATCGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAHEFTG*LAIAAA
Trigger: CGCGGCCGCGATGGCAAGGCATCCTGTGAATTCATG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCATGGTTCTGATGCCGTaGAACCTCACAGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRMVLMP*NLTGEL
Trigger: CAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCAT...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCTCATCTGGTAGTTCATaGAGGCCACGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLSSGSS*RPRPSS
Trigger: AGATGAGGGCCGTGGCCTGCATGAACTACCAGATGA...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGTGGTCTTGTAGTCGATCCCATGTGCTGCGCAGGGGAGGACTCAGCTGTGATGGTCGATCCCATGTGCTaGGCAGGGGAGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGLVVDPMCCAGEDSAVMVDPMC*AGEDSA
Trigger: AGCTGAGTCCTCCCCTGCGCAGCACATGGGATCGAC...CATCACAGCTGAGTCCTCCCCTGCGCAGCACATGGGATCGACTACAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509637.6
CDS-3UTR GCA 90 bp GGACCAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGCCATGGTGTCAGAAATaGCGCTTCCCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPAVGDVIHQEDPLAGLQPWCQK*RFPSLP
Trigger: GGGGAGGGAGGGGAAGCGGCATTTCTGACACCATGG...CTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR CCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCCCCCAGGTGGACGTaGACGTGGACGAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIAPRWT*TWTRWF
Trigger: GAACCACCTCGTCCACGTCCACGTCCACCTGGGGGC...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATACCATGCCGTGCCGCATaGGCACGATGCGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIPCRAA*ARCGIA
Trigger: AGCTATCCCGCATCGTGCTCATGCGGCACGGCATGG...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAAGAGGTCCTGCAGGCTaGACACTCGGTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIRGPAG*TLGWAS
Trigger: GGAGGCCCAACCGAGTGTTCAGCCTGCAGGACCTCT...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCACACCCAGGCTTCCCTaGAGGCCCCTTAAAAATGTA +
Preference number: 4 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRTPRLP*RPLKNV
Trigger: TACATTTTTAAGGGGCCTTCAGGGAAGCCTGGGTGT...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGCAGCTGGCGTGGCCATaGAGTCACCAGTGCACCACC +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALQLAWP*SHQCTT
Trigger: GGTGGTGCACTGGTGACTTCATGGCCACGCCAGCTG...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGGTGCTGCTTGGGCTCTaGCCACAGGACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALVLLGL*PQDHTL
Trigger: GAGGGTGTGGTCCTGTGGTCAGAGCCCAAGCAGCAC...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKAVGEMI*VLSGQC
Trigger: ACATTGACCACTCAAAACTCAGATCATCTCGCCCAC...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCTTCACCGGACTGCCCTaGGAGCCCATGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCFTGLP*EPMAAP
Trigger: CGGCGCGGCCATGGGCTCGCAGGGCAGTCCGGTGAA...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTTGTCGATGAGGTaGACGGGGGTGCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDSLSMR*TGVQET
Trigger: CGTCTCCTGCACCCCCGTGCACCTCATCGACAAGCT...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCACGGGGTCTGCACCGCTaGCCATCAAGTATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHARGLHR*PSSIPK
Trigger: CTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCG...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACCCGAGAACAGGAGGCTaGACGCAGGTGCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHPRTGG*TQVPGV
Trigger: GACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGG...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATGCCAGCGACAGAAGCTaGCGAGAACAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDASDRS*REQEAA
Trigger: TGCAGCCTCCTGTTCTCGGCAGCTTCTGTCGCTGGC...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAACCTCACAGGAGAGCTaGAGCTGTGGGGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQITSQES*SCGDPR
Trigger: CCTGGGGTCCCCACAGCTGCAGCTCTCCTGTGAGGT...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGAGGGCTCCTTCTGCGTaGTGGCCATGTCGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALRAPSA*WPCRAA
Trigger: TGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCT...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGTGTGGCAGGGCCGCCTaGCTGGGGTTCCCTTACTCA +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALCGRAA*LGFPYS
Trigger: TGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACA...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGTGTGGCAGGGCCGCCTaGCTGGGGTTCCCTTACTCA +
Preference number: 4 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVCGRAA*LGFPYS
Trigger: TGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACA...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGCAGGGGGGACGTGCAGCTGTaGAAGCTAAGTGTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: QRLVMSYTKRIPWQDCSRGDVQL*KLSVLS
Trigger: CGAGAGGACACTTAGCTTCCACAGCTGCACGTCCCC...CCTGCTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR CCA 90 bp CAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGCAGGCCTGTGGAAGTTTCCTaGGCAGGCAGATGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: QRLVMSYTKRIPWQDCSRPVEVS*AGRCGV
Trigger: AACCCCGCATCTGCCTGCCCAGGAAACTTCCACAGG...CCTGCTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR TCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHHPAQV*GKPGAS
Trigger: AGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTG...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGCAGGGGGACTCCGGGTGCATaGTCATCGATCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: QRLVMSYTKRIPWQDCSRGTPGA*SSISLI
Trigger: GATCAAGGAGATCGATGAGCATGCACCCGGAGTCCC...CCTGCTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATATCTTCTCCATGCCGTaGCGCATGAGCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDIFSMP*RMSTMR
Trigger: CCGCATCGTGCTCATGCGGCACGGCATGGAGAAGAT...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGCGGCAGCAGAGGTCCTaGAGGCTGAACACTCGGTTG +
Preference number: 4 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVRQQRS*RLNTRL
Trigger: CAACCGAGTGTTCAGCCTGCAGGACCTCTGCTGCCG...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCCCGAGAACAGGAGGCTaGACGCAGGTGCCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSPRTGG*TQVPGV
Trigger: GACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGG...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCACAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCCAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCQLEPS*HLHRRP
Trigger: GGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTG...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCCCCGCCTGCCGCGCTTaGTCCGTGCATGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCPACRA*SVHAPP
Trigger: AGGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGG...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAATGGGGCGAGTCCACTaGTGCCCAGTAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIMGRVH*CPVTPS
Trigger: GGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCAT...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTCTTTCCCGGAACCATTaGTTCGATTATAAGTTCACC +
Preference number: 4 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTALSRNH*FDYKFT
Trigger: GGTGAACTTATAATCGAACCAATGGTTCCGGGAAAG...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539661.5
CDS-3UTR TCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCCACCCGGCTCAGGTGTaGGGAAAGCCCGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPHPAQV*GKPGAS
Trigger: AGAAGCGCCGGGCTTTCCTCACACCTGAGCCGGGTG...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAACACCCAGGCTTCCCTaGAGGCCCCTTAAAAATGTA +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHATPRLP*RPLKNV
Trigger: TACATTTTTAAGGGGCCTTCAGGGAAGCCTGGGTGT...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCTCGTGCCGCACGGCCTaGGGACAGGAGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCSCRTA*GQEVEV
Trigger: CACCTCTACCTCCTGTCCTCAGGCCGTGCGGCACGA...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCAGAGGTGAGCACCAGTaGTGTGGGCAGGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCRGEHQ*CGQAQA
Trigger: CGCCTGGGCCTGCCCACAGCACTGGTGCTCACCTCT...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCCGGGAGGGCTCCTTCTaGGTGCTGGCCATGTCGTGC +
Preference number: 4 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPREGSF*VLAMSC
Trigger: GCACGACATGGCCAGCACGCAGAAGGAGCCCTCCCG...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCACGGGAGGGCTCCTTCTaGGTGCTGGCCATGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSREGSF*VLAMSC
Trigger: GCACGACATGGCCAGCACGCAGAAGGAGCCCTCCCG...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATACTCCTGAGTGCTGCTTaGGCTCTGACCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQILLSAA*ALTTGP
Trigger: TGGTCCTGTGGTCAGAGCCCAAGCAGCACTCAGGAG...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGGACCAGCGGTTGGTaGTGTCATACACCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDRTSGW*CHTPRG
Trigger: TCCTCTTGGTGTATGACATCACCAACCGCTGGTCCT...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCCCATGCCGTGCCGCATaGGCACGATGCGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSPCRAA*ARCGIA
Trigger: AGCTATCCCGCATCGTGCTCATGCGGCACGGCATGG...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAGTGGAAGCTTGTCGATaGGGTGCACGGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSVEACR*GARGCR
Trigger: CCTGCACCCCCGTGCACCTCATCGACAAGCTTCCAC...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCGTGCTGCTTGGGCTCTaGCCACAGGACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCVLLGL*PQDHTL
Trigger: GAGGGTGTGGTCCTGTGGTCAGAGCCCAAGCAGCAC...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTCAGGATGGTTCTaGTGCCGTGCAACCTCACAG +
Preference number: 4 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVRSGWF*CRATSQ
Trigger: CTGTGAGGTTGCACGGCATCAGAACCATCCTGACCT...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATAGCTCTTCACCGGACTaGCCTGCGAGCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNSSSPD*PASPWP
Trigger: CGGCCATGGGCTCGCAGGGCAGTCCGGTGAAGAGCT...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACCATGCAGTTCTTCTCTaGGTACGCGCGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHHAVLL*VRAGLL
Trigger: GAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATG...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGCCCGCTAGGAGATCTTaGAGTTACTCCGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALPARRS*SYSASS
Trigger: ACTGCTCGCGGAGTAACTGCAAGATCTCCTAGCGGG...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATTCGAGGAGTCCCAAGTaGGTCCCCGCAGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNSRSPK*VPAAGV
Trigger: CACGCCAGCTGCGGGGACGCACTTGGGACTCCTCGA...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCACAGGTGCCCGGGGTCTaGACCGCTGCCCATCAAGTA +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSQVPGV*TAAHQV
Trigger: TACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAACCTCACAGGAGAGCTaGAGCTGTGGGGACCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSTSQES*SCGDPR
Trigger: CCTGGGGTCCCCACAGCTGCAGCTCTCCTGTGAGGT...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAACCTTGGGAAGCATGTaGCGCGGAGTCCACCACGGG +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSTLGSM*RGVHHG
Trigger: CCCGTGGTGGACTCCGCGGCACATGCTTCCCAAGGT...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCATGTGGCAGGGCCGCCTaGCTGGGGTTCCCTTACTCA +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSCGRAA*LGFPYS
Trigger: TGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACA...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGTGGCAGGGCCGCCTaGCTGGGGTTCCCTTACTCA +
Preference number: 4 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPCGRAA*LGFPYS
Trigger: TGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACA...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACCCCAAACAAGGGCCCTaGTGGCAGCAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHPKQGP*WQQQDR
Trigger: CCTGTCCTGTTGCTGCCAGCAGGGCCCTTGTTTGGG...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGGATGGTGACGGGCAGTaGAAGCTTGTCGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALDGDGQ*KLVDEV
Trigger: CACCTCATCGACAAGCTTCCACTGCCCGTCACCATC...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCTCAAGCCCAGGCAGCTaGGGAGGCCCGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCSSPGS*GGPACF
Trigger: GAAACAAGCCGGGCCTCCCCAGCTGCCTGGGCTTGA...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCTCAAGCCCAGGCAGCTaGGGAGGCCCGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSSSPGS*GGPACF
Trigger: GAAACAAGCCGGGCCTCCCCAGCTGCCTGGGCTTGA...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGGAGCAACAAAAATGTaGGCTGCCAGGTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIGATKM*AARCTS
Trigger: GGAGGTGCACCTGGCAGCCCACATTTTTGTTGCTCC...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATGCTCCTTCTGCGTGCTaGCCATGTCGTGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNAPSAC*PCRAAR
Trigger: CCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGC...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCATGCCGTGCCGCATaGGCACGATGCGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNPCRAA*ARCGIA
Trigger: AGCTATCCCGCATCGTGCTCATGCGGCACGGCATGG...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAGGTCCTCAAAGTCTGTaGGGTTTGTTCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHAGPQSL*GLFIIP
Trigger: TGGGATTATGAACAAACCTCACAGACTTTGAGGACC...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCCATGCAGTTCTTCTCTaGGTACGCGCGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPHAVLL*VRAGLL
Trigger: GAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATG...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCACATGCAGTTCTTCTCTaGGTACGCGCGGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSHAVLL*VRAGLL
Trigger: GAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATG...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCACGGCAGCAGAGGTCCTaGAGGCTGAACACTCGGTTG +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSRQQRS*RLNTRL
Trigger: CAACCGAGTGTTCAGCCTGCAGGACCTCTGCTGCCG...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCAGCTTGTCGATGAGGTaGACGGGGGTGCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCSLSMR*TGVQET
Trigger: CGTCTCCTGCACCCCCGTGCACCTCATCGACAAGCT...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCGCCAGCGACAGAAGCTaGCGAGAACAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSASDRS*REQEAA
Trigger: TGCAGCCTCCTGTTCTCGGCAGCTTCTGTCGCTGGC...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAATGGGGCGAGTCCACTaGTGCCCAGTAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSMGRVH*CPVTPS
Trigger: GGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCAT...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGGACTTGGACCTCTTaGGGCTGTTGCCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPWTWTS*GCCPCC
Trigger: GCAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCA...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAATCTTCTCCATGCCGTaGCGCATGAGCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSIFSMP*RMSTMR
Trigger: CCGCATCGTGCTCATGCGGCACGGCATGGAGAAGAT...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACCCCGCTAGGAGATCTTaGAGTTACTCCGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHPARRS*SYSASS
Trigger: ACTGCTCGCGGAGTAACTGCAAGATCTCCTAGCGGG...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCATGTGGGCTGCCAGGTaGACCTCCTTTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSMWAAR*TSFLPS
Trigger: AGAGGGGAGAAAGGAGGTGCACCTGGCAGCCCACAT...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAACAAAAATGTGGGCTaGCAGGTGCACCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDNKNVG*QVHLLS
Trigger: AGAAAGGAGGTGCACCTGGCAGCCCACATTTTTGTT...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATGCCAGCGACAGAAGCTaGCGAGAACAGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNASDRS*REQEAA
Trigger: TGCAGCCTCCTGTTCTCGGCAGCTTCTGTCGCTGGC...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCGTTCTCATCCCCACGTaGGGAGGGATTTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSVLIPT*GGIWGA
Trigger: TGCTCCCCAAATCCCTCCCCACGTGGGGATGAGAAC...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CCA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATATGGGGCGAGTCCACTaGTGCCCAGTAACACCCTCC +
Preference number: 4 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNMGRVH*CPVTPS
Trigger: GGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCAT...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGGACCAGCGGTTGGTaGTGTCATACACCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHRTSGW*CHTPRG
Trigger: TCCTCTTGGTGTATGACATCACCAACCGCTGGTCCT...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCCCCGCTAGGAGATCTTaGAGTTACTCCGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPPARRS*SYSASS
Trigger: ACTGCTCGCGGAGTAACTGCAAGATCTCCTAGCGGG...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR GCA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTCATCTGGTAGTTCATaGAGGCCACGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPSSGSS*RPRPSS
Trigger: AGATGAGGGCCGTGGCCTGCATGAACTACCAGATGA...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAGTGGGCGAGATGATCTaGGTTTTGAGTGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSVGEMI*VLSGQC
Trigger: ACATTGACCACTCAAAACTCAGATCATCTCGCCCAC...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GGGCGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACGGTCCTCAAAGTCTGTaGGGTTTGTTCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: GRDDLSFEWSMSPKVSHHGPQSL*GLFIIP
Trigger: TGGGATTATGAACAAACCTCACAGACTTTGAGGACC...GTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR TCA 90 bp GTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCAGGAAGGTTCTCAGGTCCTCAAAGTCTGTaGGGTTTGTTCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: VLSGQCPRRCHITAGRFSGPQSL*GLFIIP
Trigger: TGGGATTATGAACAAACCTCACAGACTTTGAGGACC...TGAGAACCTTCCTGCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS GCA 90 bp GTAGCTCTTCACCGGACTGCCCTGCGAGCCCATGGCCGCGCCGCCTaGGCCCCGCGCCGGCCGCCTGCCGAAGCACCGCCGGGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VALHRTALRAHGRAA*APRRPPAEAPPGEA
Trigger: GGCCTCACCCGGCGGTGCTTCGGCAGGCGGCCGGCGCGGGGCGCAGGCGGCGCGGCCATGGGCTCGCAGGGCAGTCCGGTGAAGAGCTAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248139.8
CDS TCA 90 bp GACGGGCGGCAGGATGCAGGCGCGCCCGAGCCGAGGCGATGCGGCTaGGTCCGGGAAACGAAAGCCCCTCGCAGGCTGTGCCGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: DGRQDAGAPEPRRCG*VRETKAPRRLCRLL
Trigger: AAGCAGGCGGCACAGCCTGCGAGGGGCTTTCGTTTCCCGGACTCAGCCGCATCGCCTCGGCTCGGGCGCGCCTGCATCCTGCCGCCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535977.5
ENST00000569575.5
CDS GCA 90 bp GGGCGGAGGTCAAGGTGGGCAGACCCCAGGGCTCAGGCCCTACAGTaGAGCCCTTCCGGGTGGCCCCGTAGCTCCTGGTCTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GRRSRWADPRAQALQ*SPSGWPRSSWSCWA
Trigger: AGCCCAGCAAGACCAGGAGCTACGGGGCCACCCGGAAGGGCTGCACTGTAGGGCCTGAGCCCTGGGGTCTGCCCACCTTGACCTCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS-3UTR CAA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACATTGAGGCTGTTGCCCTaGCTGCCGCCGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTLRLLP*LPPPPA
Trigger: GGCCGGGGGCGGCGGCAGCAAGGGCAACAGCCTCAA...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTAGGAGGCCAGTGTCTTaGGGGGCTGTGGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: EPGPRSPKLPEGAPALSARRPVS*GAVAGP
Trigger: CGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCCT...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS GCA 90 bp ACGTTGTTTGTATCCGCCCCTTCAACGCGCGGACGGGCGGCAGGATaGAGGCGCGCCCGAGCCGAGGCGATGCGGCTGAGTCCGGGAAAC +
Preference number: 5 (lower is better)
Translates to: TLFVSAPSTRGRAAG*RRARAEAMRLSPGN
Trigger: GTTTCCCGGACTCAGCCGCATCGCCTCGGCTCGGGCGCGCCTGCATCCTGCCGCCCGTCCGCGCGTTGAAGGGGCGGATACAAACAACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535977.5
ENST00000569575.5
CDS-3UTR CAA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCTTGAGGCTGTTGCCCTaGCTGCCGCCGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRLRLLP*LPPPPA
Trigger: GGCCGGGGGCGGCGGCAGCAAGGGCAACAGCCTCAA...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CAGAAGCTGCCGAGAACAGGAGGCTGCACGCAGGTGCCCGGGGTCTGCACCGCTGACCTCTTGAGGCTGTaGCCCTTGCTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: QKLPRTGGCTQVPGVCTADLLRL*PLLPPP
Trigger: GGGCGGCGGCAGCAAGGGCAACAGCCTCAAGAGGTC...AGCGGTGCAGACCCCGGGCACCTGCGTGCAGCCTCCTGTTCTCGGCAGCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCTCCCGCCTGCCGCGCTaGGTCCGTGCATGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKASRLPR*VRACSS
Trigger: GGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGGA...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CACGTAGGCGGCACTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTCCGTGGGACCACCTaGGGAAGCATGTGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: HVGGTGLASSQECPARALLRGTT*GSMCRG
Trigger: TCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGAG...GAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAGTGCCGCCTACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS TCA 90 bp CCCACCCCTCAGCCGCAGCAGGGCCCGCCCTCATTGTCTGGACTATaGTGGGGTGAGGGCCGTGGGAGGTCAAGGTGGGCGGAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: PTPQPQQGPPSLSGL*WGEGRGRSRWAEVK
Trigger: CTTGACCTCCGCCCACCTTGACCTCCCACGGCCCTCACCCCATCATAGTCCAGACAATGAGGGCGGGCCCTGCTGCGGCTGAGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS-3UTR CAA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGACGGGCAGTGGAAGCTaGTCGATGAGGTGCACGGGG +
Preference number: 5 (lower is better)
Translates to: GRAPSACWPCRAARPEDRTGSGS*SMRCTG
Trigger: CCCCGTGCACCTCATCGACAAGCTTCCACTGCCCGT...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGACCTCTTGAGGCTGTaGCCCTTGCTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRDLLRL*PLLPPP
Trigger: GGGCGGCGGCAGCAAGGGCAACAGCCTCAAGAGGTC...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATCCCGCCTGCCGCGCTaGGTCCGTGCATGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEASRLPR*VRACSS
Trigger: GGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGGA...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTC +
Preference number: 5 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSNSQDA*PSRPRV
Trigger: GACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATT...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACCTCCGTGGGACCACCTaGGGAAGCATGTGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHLRGTT*GSMCRG
Trigger: TCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGAG...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS TCA 90 bp GCTCCTGGTCTTGCTGGGCTCCACGCCCGACTGTCGTGTGCACAGTaGCCAGCATGCCCAGGCGTAGGCCGTGGGACAGTGCAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: APGLAGLHARLSCAQ*PACPGVGRGTVQGA
Trigger: TGCACCCTGCACTGTCCCACGGCCTACGCCTGGGCATGCTGGTCACTGTGCACACGACAGTCGGGCGTGGAGCCCAGCAAGACCAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS GCA 90 bp CCCCGTAGCTCCTGGTCTTGCTGGGCTCCACGCCCGACTGTCGTGTaGACAGTGACCAGCATGCCCAGGCGTAGGCCGTGGGACAGTGCA +
Preference number: 5 (lower is better)
Translates to: PRSSWSCWAPRPTVV*TVTSMPRRRPWDSA
Trigger: TGCACTGTCCCACGGCCTACGCCTGGGCATGCTGGTCACTGTGCACACGACAGTCGGGCGTGGAGCCCAGCAAGACCAGGAGCTACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS GCA 90 bp GCCCTACAGTGCAGCCCTTCCGGGTGGCCCCGTAGCTCCTGGTCTTaGTGGGCTCCACGCCCGACTGTCGTGTGCACAGTGACCAGCATG +
Preference number: 5 (lower is better)
Translates to: ALQCSPSGWPRSSWS*WAPRPTVVCTVTSM
Trigger: CATGCTGGTCACTGTGCACACGACAGTCGGGCGTGGAGCCCAGCAAGACCAGGAGCTACGGGGCCACCCGGAAGGGCTGCACTGTAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS GCA 90 bp GTGCATGCTGGGGGCACAGAACTCAGCAGACGCACAAACGCAGGGTaGCACCCACCCCTCAGCCGCAGCAGGGCCCGCCCTCATTGTCTG +
Preference number: 5 (lower is better)
Translates to: VHAGGTELSRRTNAG*HPPLSRSRARPHCL
Trigger: CAGACAATGAGGGCGGGCCCTGCTGCGGCTGAGGGGTGGGTGGCACCCTGCGTTTGTGCGTCTGCTGAGTTCTGTGCCCCCAGCATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS-3UTR CAA 90 bp TGCCATCGCGGCCGCGAGTCCCCTCTCGAGGAGTCCCAAGTGCGTCCCCGCAGCAGGCTGAACACTCGGTaGGGCCTCCAGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CHRGRESPLEESQVRPRSRLNTR*GLQIFS
Trigger: GGAGAAGATCTGGAGGCCCAACCGAGTGTTCAGCCT...GCTGCGGGGACGCACTTGGGACTCCTCGAGAGGGGACTCGCGGCCGCGATGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATCTGGGGAGGCCCGGCTaGTTTCCGACCAAGATTCCC +
Preference number: 5 (lower is better)
Translates to: APPASGQPRHSQRMNSQDLGRPG*FPTKIP
Trigger: GGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAG...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACACTCCGTGGGACCACCTaGGGAAGCATGTGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTLRGTT*GSMCRG
Trigger: TCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGAG...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCAGGAGGCCAGTGTCTTaGGGGGCTGTGGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRRRPVS*GAVAGP
Trigger: CGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCCT...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTCCAAGGACTCGATGACGTaGAAGTTGCACAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ARAPVTQASRGSTGPVCSKDSMT*KLHRGL
Trigger: CAGCCCCCTGTGCAACTTCAACGTCATCGAGTCCTT...GGAGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTAGGCTGAACACTCGGTaGGGCCTCCAGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EPGPRSPKLPEGAPALSARLNTR*GLQIFS
Trigger: GGAGAAGATCTGGAGGCCCAACCGAGTGTTCAGCCT...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GAGCCAGGGCCCCGGTCACCCAAGCTTCCAGAGGGAGCACCGGCCCTGTCTGCTGGTGGACGGATGGACTaGGACCTCTTGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EPGPRSPKLPEGAPALSAGGRMD*DLLRLL
Trigger: CAACAGCCTCAAGAGGTCCAAGTCCATCCGTCCACC...AGCAGACAGGGCCGGTGCTCCCTCTGGAAGCTTGGGTGACCGGGGCCCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTCTGGGGAGGCCCGGCTaGTTTCCGACCAAGATTCCC +
Preference number: 5 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRLGRPG*FPTKIP
Trigger: GGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAG...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCCTCCGTGGGACCACCTaGGGAAGCATGTGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRLRGTT*GSMCRG
Trigger: TCCGCGGCACATGCTTCCCAAGGTGGTCCCACGGAG...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAACGGGCAGTGGAAGCTaGTCGATGAGGTGCACGGGG +
Preference number: 5 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEATGSGS*SMRCTG
Trigger: CCCCGTGCACCTCATCGACAAGCTTCCACTGCCCGT...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATTTGAGGCTGTTGCCCTaGCTGCCGCCGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDLRLLP*LPPPPA
Trigger: GGCCGGGGGCGGCGGCAGCAAGGGCAACAGCCTCAA...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCTGTGGCAGGGCCGCCTGCCTGGGGTTCCCTTACTCATCTGGTAGTTCATGCAGACCTCTTGAGGCTGTaGCCCTTGCTGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: AVAGPPAWGSLTHLVVHADLLRL*PLLPPP
Trigger: GGGCGGCGGCAGCAAGGGCAACAGCCTCAAGAGGTC...TGCATGAACTACCAGATGAGTAAGGGAACCCCAGGCAGGCGGCCCTGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GGGAGGGCTCCTTCTGCGTGCTGGCCATGTCGTGCCGCACGGCCTGAGGACAGGATGGACTTGGACCTCTaGAGGCTGTTGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GRAPSACWPCRAARPEDRMDLDL*RLLPLL
Trigger: CAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCAT...CCTGTCCTCAGGCCGTGCGGCACGACATGGCCAGCACGCAGAAGGAGCCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATAAGGACTCGATGACGTaGAAGTTGCACAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: APPASGQPRHSQRMNSQDKDSMT*KLHRGL
Trigger: CAGCCCCCTGTGCAACTTCAACGTCATCGAGTCCTT...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp TGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACAGGTGGACGGATGGACTaGGACCTCTTGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: WPGVQPGVSSSSPPGICTGGRMD*DLLRLL
Trigger: CAACAGCCTCAAGAGGTCCAAGTCCATCCGTCCACC...TGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CATCTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTC +
Preference number: 5 (lower is better)
Translates to: HLPGTGHGASPLVPSNTLNSQDA*PSRPRV
Trigger: GACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATT...GAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCGCTTGGTCCGTGCATGCTCCTCCTCGCACCCGGCTCAGGTGTGAGGAAAGCCAAGGACTCGATGACGTaGAAGTTGCACAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ALGPCMLLLAPGSGVRKAKDSMT*KLHRGL
Trigger: CAGCCCCCTGTGCAACTTCAACGTCATCGAGTCCTT...GGCTTTCCTCACACCTGAGCCGGGTGCGAGGAGGAGCATGCACGGACCAAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CTCCCAGGAACGGGCCATGGGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTATGGACTTGGACCTCTaGAGGCTGTTGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LPGTGHGASPLVPSNTLRMDLDL*RLLPLL
Trigger: CAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCAT...ACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCCCATGGCCCGTTCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCTCCCCCGGCCTCTGGGCAGCCCCGCCACTCGCAGCGCATGAATTCACAGGATTCAAAGGACCAGCGGTaGGTGATGTCATACACCAAG +
Preference number: 5 (lower is better)
Translates to: APPASGQPRHSQRMNSQDSKDQR*VMSYTK
Trigger: CTTGGTGTATGACATCACCAACCGCTGGTCCTTTGA...ATCCTGTGAATTCATGCGCTGCGAGTGGCGGGGCTGCCCAGAGGCCGGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CTGGCCTGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTGGCATCTGCACTCAAAGGACCAGCGGTaGGTGATGTCATACACCAAG +
Preference number: 5 (lower is better)
Translates to: LAWRPARSVQLEPSWHLHSKDQR*VMSYTK
Trigger: CTTGGTGTATGACATCACCAACCGCTGGTCCTTTGA...GTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCATGGACTTGGACCTCTaGAGGCTGTTGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRMDLDL*RLLPLL
Trigger: CAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCAT...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGAGGCCAGTGTCTTaGGGGGCTGTGGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVRRPVS*GAVAGP
Trigger: CGGCCCTGCCACAGCCCCCAAAGACACTGGCCTCCT...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GGGCGAGTCCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCAGGAAGTCCACGTTGTTaGTATCCGCCCCTTCAACGC +
Preference number: 5 (lower is better)
Translates to: GRVHWCPVTPSVGPPWEAGSPRC*YPPLQR
Trigger: GCGTTGAAGGGGCGGATACAAACAACGTGGACTTCC...TGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGGACTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535977.5
CDS-3UTR CAA 90 bp CTGAGCGCCCCTGGAGTAGGACCTGAAGATGGTGCAGAACCGGCCCTGGCCCGATCAAAGGACCAGCGGTaGGTGATGTCATACACCAAG +
Preference number: 5 (lower is better)
Translates to: LSAPGVGPEDGAEPALARSKDQR*VMSYTK
Trigger: CTTGGTGTATGACATCACCAACCGCTGGTCCTTTGA...TCGGGCCAGGGCCGGTTCTGCACCATCTTCAGGTCCTACTCCAGGGGCGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509637.6
CDS-3UTR CAA 90 bp GCTGGGGAGGCCCGGCTTGTTTCCGACCAAGATTCCCGGAAGCACCAGCAGCCCTCAAAGGACCAGCGGTaGGTGATGTCATACACCAAG +
Preference number: 5 (lower is better)
Translates to: AGEARLVSDQDSRKHQQPSKDQR*VMSYTK
Trigger: CTTGGTGTATGACATCACCAACCGCTGGTCCTTTGA...GGGCTGCTGGTGCTTCCGGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCTTGAGGCTGTTGCCCTaGCTGCCGCCGCCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCLRLLP*LPPPPA
Trigger: GGCCGGGGGCGGCGGCAGCAAGGGCAACAGCCTCAA...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS GCA 90 bp CTCCCTCAGAGGGCATTGGGCAAAGGCAGGGCGTGGACTCCAGCGTaGCTGGAGAAAGGGCAGTGCCTTTATTTCCACCCTGACCTACTT +
Preference number: 5 (lower is better)
Translates to: LPQRALGKGRAWTPA*LEKGQCLYFHPDLL
Trigger: AAGTAGGTCAGGGTGGAAATAAAGGCACTGCCCTTTCTCCAGGCACGCTGGAGTCCACGCCCTGCCTTTGCCCAATGCCCTCTGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS-3UTR CAA 90 bp CCACTGGTGCCCAGTAACACCCTCCGTGGGACCACCTTGGGAAGCATGTGCCGCTCAAAGGACCAGCGGTaGGTGATGTCATACACCAAG +
Preference number: 5 (lower is better)
Translates to: PLVPSNTLRGTTLGSMCRSKDQR*VMSYTK
Trigger: CTTGGTGTATGACATCACCAACCGCTGGTCCTTTGA...GCGGCACATGCTTCCCAAGGTGGTCCCACGGAGGGTGTTACTGGGCACCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCTCCCGCCTGCCGCGCTaGGTCCGTGCATGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCSRLPR*VRACSS
Trigger: GGAGGAGCATGCACGGACCAAGCGCGGCAGGCGGGA...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GGACCAGCGGTTGGTGATGTCATACACCAAGAGGATCCCCTGGCAGGACTGCAGAAGGACTCGATGACGTaGAAGTTGCACAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GPAVGDVIHQEDPLAGLQKDSMT*KLHRGL
Trigger: CAGCCCCCTGTGCAACTTCAACGTCATCGAGTCCTT...CTGCAGTCCTGCCAGGGGATCCTCTTGGTGTATGACATCACCAACCGCTGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS-3UTR CAA 90 bp GCAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATGGTGGACGGATGGACTaGGACCTCTTGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AGARGLHRCPSSIPKSTDGGRMD*DLLRLL
Trigger: CAACAGCCTCAAGAGGTCCAAGTCCATCCGTCCACC...ATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTC +
Preference number: 5 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVNSQDA*PSRPRV
Trigger: GACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATT...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CAGGTGCCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAAGGCTGAACACTCGGTaGGGCCTCCAGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QVPGVCTAAHQVFLSLQIRLNTR*GLQIFS
Trigger: GGAGAAGATCTGGAGGCCCAACCGAGTGTTCAGCCT...TATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CCCGGGGTCTGCACCGCTGCCCATCAAGTATTCCTAAGTCTACAGATAGCTCTGGGTGGACGGATGGACTaGGACCTCTTGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PGVCTAAHQVFLSLQIALGGRMD*DLLRLL
Trigger: CAACAGCCTCAAGAGGTCCAAGTCCATCCGTCCACC...CAGAGCTATCTGTAGACTTAGGAATACTTGATGGGCAGCGGTGCAGACCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCGGGTAGTGTTGATGCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAAGGACTCGATGACGTaGAAGTTGCACAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AGSVDAVNAGPSRSSKSVKDSMT*KLHRGL
Trigger: CAGCCCCCTGTGCAACTTCAACGTCATCGAGTCCTT...CACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGCATCAACACTACCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCACGGGCAGTGGAAGCTaGTCGATGAGGTGCACGGGG +
Preference number: 5 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPTGSGS*SMRCTG
Trigger: CCCCGTGCACCTCATCGACAAGCTTCCACTGCCCGT...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCCTGGGGAGGCCCGGCTaGTTTCCGACCAAGATTCCC +
Preference number: 5 (lower is better)
Translates to: PSRSSKSVRFVHNPKQGPLGRPG*FPTKIP
Trigger: GGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAG...GGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCCTGGGGAGGCCCGGCTaGTTTCCGACCAAGATTCCC +
Preference number: 5 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSLGRPG*FPTKIP
Trigger: GGGAATCTTGGTCGGAAACAAGCCGGGCCTCCCCAG...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATACGGGCAGTGGAAGCTaGTCGATGAGGTGCACGGGG +
Preference number: 5 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNTGSGS*SMRCTG
Trigger: CCCCGTGCACCTCATCGACAAGCTTCCACTGCCCGT...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS GCA 90 bp GGCAAAGGCAGGGCGTGGACTCCAGCGTGCCTGGAGAAAGGGCAGTaGCTTTATTTCCACCCTGACCTACTTCGTATGCATTTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GKGRAWTPACLEKGQ*LYFHPDLLRMHFEV
Trigger: AACTTCAAAATGCATACGAAGTAGGTCAGGGTGGAAATAAAGGCACTGCCCTTTCTCCAGGCACGCTGGAGTCCACGCCCTGCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS-3UTR CAA 90 bp GCCGTGAATGCAGGACCATCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATAATTCACAGGATGCCTaGCCATCGCGGCCGCGAGTC +
Preference number: 5 (lower is better)
Translates to: AVNAGPSRSSKSVRFVHNNSQDA*PSRPRV
Trigger: GACTCGCGGCCGCGATGGCAAGGCATCCTGTGAATT...ATTATGAACAAACCTCACAGACTTTGAGGACCTGGATGGTCCTGCATTCACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp CGAGATGATCTGAGTTTTGAGTGGTCAATGTCCCCGAAGGTGTCACATCACAGCATGGACTTGGACCTCTaGAGGCTGTTGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RDDLSFEWSMSPKVSHHSMDLDL*RLLPLL
Trigger: CAGCAAGGGCAACAGCCTCAAGAGGTCCAAGTCCAT...GCTGTGATGTGACACCTTCGGGGACATTGACCACTCAAAACTCAGATCATCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
CDS-3UTR CAA 90 bp TCCAGGTCCTCAAAGTCTGTGAGGTTTGTTCATAATCCCAAACAAGGGCCCTGCGCTCGGAAGTCCACGTaGTTTGTATCCGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SRSSKSVRFVHNPKQGPCARKST*FVSAPS
Trigger: TGAAGGGGCGGATACAAACAACGTGGACTTCCGAGC...GCAGGGCCCTTGTTTGGGATTATGAACAAACCTCACAGACTTTGAGGACCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535977.5
CDS GCA 90 bp AAGTTGAATTCTCCAAGGCGAATGTATTTCCAAGTCTCGGCTTACTaGAGCCCAGGAACTGCCAAGGTTGGTGTTAGGGAGGGCCAAACA +
Preference number: 5 (lower is better)
Translates to: KLNSPRRMYFQVSAY*SPGTAKVGVREGQT
Trigger: TGTTTGGCCCTCCCTAACACCAACCTTGGCAGTTCCTGGGCTGCAGTAAGCCGAGACTTGGAAATACATTCGCCTTGGAGAATTCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS GCA 72 bp GTATCCGCCCCTTCAACGCGCGGACGGGCGGCAGGATaGAGGCGCGCCCGAGCCGAGGCGATGCGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: VSAPSTRGRAAG*RRARAEAMRLS
Trigger: ACTCAGCCGCATCGCCTCGGCTCGGGCGCGCCTGCATCCTGCCGCCCGTCCGCGCGTTGAAGGGGCGGATAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535977.5
ENST00000569575.5
CDS CCA 72 bp GAGGAAGCACAGGGCGCTGAGGGGACGCGCCACTCCTaGAGCGAGCGCCCGCGAGACCAGCCTCGGCCACTG +
Preference number: 6 (lower is better)
Translates to: EEAQGAEGTRHS*SERPRDQPRPL
Trigger: CAGTGGCCGAGGCTGGTCTCGCGGGCGCTCGCTCCAGGAGTGGCGCGTCCCCTCAGCGCCCTGTGCTTCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS GCA 72 bp GGGAAATCTCGGGGCTCTGGCCCAGCAACCCAGGCCTaGCCACTTCTGCACACGGGCCACGGGCAGGGCGGG +
Preference number: 6 (lower is better)
Translates to: GKSRGSGPATQA*PLLHTGHGQGG
Trigger: CCCGCCCTGCCCGTGGCCCGTGTGCAGAAGTGGGCAGGCCTGGGTTGCTGGGCCAGAGCCCCGAGATTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CCA 72 bp ATGGGCACGGCTTGCCTGGAATGGGGCCTCCGCCTGTaGCCCGCGCTGGGTGCAAGGCACAGGGCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: MGTACLEWGLRL*PALGARHRASP
Trigger: GGGAGAGGCCCTGTGCCTTGCACCCAGCGCGGGCCACAGGCGGAGGCCCCATTCCAGGCAAGCCGTGCCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CAA 90 bp ATCGGGCCCCACAGCCTAGCAGGCCAGCCTCTCCATGGGCACGGCTaGCCTGGAATGGGGCCTCCGCCTGTGGCCCGCGCTGGGTGCAAG +
Preference number: 6 (lower is better)
Translates to: IGPHSLAGQPLHGHG*PGMGPPPVARAGCK
Trigger: CTTGCACCCAGCGCGGGCCACAGGCGGAGGCCCCATTCCAGGCAAGCCGTGCCCATGGAGAGGCTGGCCTGCTAGGCTGTGGGGCCCGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS TCA 72 bp CAGGATGCAGGCGCGCCCGAGCCGAGGCGATGCGGCTaGGTCCGGGAAACGAAAGCCCCTCGCAGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: QDAGAPEPRRCG*VRETKAPRRLC
Trigger: GCACAGCCTGCGAGGGGCTTTCGTTTCCCGGACTCAGCCGCATCGCCTCGGCTCGGGCGCGCCTGCATCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535977.5
ENST00000569575.5
CDS GCA 72 bp TCCGGGAAACGAAAGCCCCTCGCAGGCTGTGCCGCCTaGTTCCGCAGAACCCTCGGAGGGAGCGGCGGGGTG +
Preference number: 6 (lower is better)
Translates to: SGKRKPLAGCAA*FRRTLGGSGGV
Trigger: CACCCCGCCGCTCCCTCCGAGGGTTCTGCGGAAGCAGGCGGCACAGCCTGCGAGGGGCTTTCGTTTCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535977.5
ENST00000569575.5
CDS CCA 72 bp TGGCGTCCAGCCAGGAGTGTCCAGCTCGAGCCCTCCTaGCATCTGCACAGGCGGCCCCGCCCATCCCCGCTA +
Preference number: 6 (lower is better)
Translates to: WRPARSVQLEPS*HLHRRPRPSPL
Trigger: TAGCGGGGATGGGCGGGGCCGCCTGTGCAGATGCCAGGAGGGCTCGAGCTGGACACTCCTGGCTGGACGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248139.8
ENST00000535977.5
ENST00000538492.5
ENST00000539661.5
ENST00000561781.1
CDS CCA 72 bp CCCAGGGCTCAGGCCCTACAGTGCAGCCCTTCCGGGTaGCCCCGTAGCTCCTGGTCTTGCTGGGCTCCACGC +
Preference number: 6 (lower is better)
Translates to: PRAQALQCSPSG*PRSSWSCWAPR
Trigger: GCGTGGAGCCCAGCAAGACCAGGAGCTACGGGGCCACCCGGAAGGGCTGCACTGTAGGGCCTGAGCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS CAA 90 bp GGCCCGCGCTGGGTGCAAGGCACAGGGCCTCTCCCTCAGAGGGCATaGGGCAAAGGCAGGGCGTGGACTCCAGCGTGCCTGGAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: GPRWVQGTGPLPQRA*GKGRAWTPACLEKG
Trigger: CCCTTTCTCCAGGCACGCTGGAGTCCACGCCCTGCCTTTGCCCAATGCCCTCTGAGGGAGAGGCCCTGTGCCTTGCACCCAGCGCGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS TCA 72 bp TCTTGTAGTCGATCCCTGCGAGGAAGCACAGGGCGCTaGGGGGACGCGCCACTCCTGGAGCGAGCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: SCSRSLRGSTGR*GDAPLLERAPA
Trigger: CGCGGGCGCTCGCTCCAGGAGTGGCGCGTCCCCTCAGCGCCCTGTGCTTCCTCGCAGGGATCGACTACAAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CCA 72 bp AGGGCCGTGGGAGGTCAAGGTGGGCGGAGGTCAAGGTaGGCAGACCCCAGGGCTCAGGCCCTACAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: RAVGGQGGRRSR*ADPRAQALQCS
Trigger: GCTGCACTGTAGGGCCTGAGCCCTGGGGTCTGCCCACCTTGACCTCCGCCCACCTTGACCTCCCACGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS GCA 72 bp TGCAGCCCTTCCGGGTGGCCCCGTAGCTCCTGGTCTTaGTGGGCTCCACGCCCGACTGTCGTGTGCACAGTG +
Preference number: 6 (lower is better)
Translates to: CSPSGWPRSSWS*WAPRPTVVCTV
Trigger: CACTGTGCACACGACAGTCGGGCGTGGAGCCCAGCAAGACCAGGAGCTACGGGGCCACCCGGAAGGGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS GCA 72 bp TCAAGGTGGGCAGACCCCAGGGCTCAGGCCCTACAGTaGAGCCCTTCCGGGTGGCCCCGTAGCTCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: SRWADPRAQALQ*SPSGWPRSSWS
Trigger: AGACCAGGAGCTACGGGGCCACCCGGAAGGGCTGCACTGTAGGGCCTGAGCCCTGGGGTCTGCCCACCTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS CCA 72 bp AGCCCTTCCGGGTGGCCCCGTAGCTCCTGGTCTTGCTaGGCTCCACGCCCGACTGTCGTGTGCACAGTGACC +
Preference number: 6 (lower is better)
Translates to: SPSGWPRSSWSC*APRPTVVCTVT
Trigger: GGTCACTGTGCACACGACAGTCGGGCGTGGAGCCCAGCAAGACCAGGAGCTACGGGGCCACCCGGAAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS CCA 72 bp CTACAGTGCAGCCCTTCCGGGTGGCCCCGTAGCTCCTaGTCTTGCTGGGCTCCACGCCCGACTGTCGTGTGC +
Preference number: 6 (lower is better)
Translates to: LQCSPSGWPRSS*SCWAPRPTVVC
Trigger: GCACACGACAGTCGGGCGTGGAGCCCAGCAAGACCAGGAGCTACGGGGCCACCCGGAAGGGCTGCACTGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS TCA 72 bp CTTGCTGGGCTCCACGCCCGACTGTCGTGTGCACAGTaGCCAGCATGCCCAGGCGTAGGCCGTGGGACAGTG +
Preference number: 6 (lower is better)
Translates to: LAGLHARLSCAQ*PACPGVGRGTV
Trigger: CACTGTCCCACGGCCTACGCCTGGGCATGCTGGTCACTGTGCACACGACAGTCGGGCGTGGAGCCCAGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS GCA 72 bp TCCTGGTCTTGCTGGGCTCCACGCCCGACTGTCGTGTaGACAGTGACCAGCATGCCCAGGCGTAGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: SWSCWAPRPTVV*TVTSMPRRRPW
Trigger: CCACGGCCTACGCCTGGGCATGCTGGTCACTGTGCACACGACAGTCGGGCGTGGAGCCCAGCAAGACCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561781.1
CDS CAA 72 bp CCGCACGCTCGCCAATCAGGGGCTCGGAAGTCCACGTaGTTTGTATCCGCCCCTTCAACGCGCGGACGGGCG +
Preference number: 6 (lower is better)
Translates to: PHARQSGARKST*FVSAPSTRGRA
Trigger: CGCCCGTCCGCGCGTTGAAGGGGCGGATACAAACAACGTGGACTTCCGAGCCCCTGATTGGCGAGCGTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535977.5
ENST00000569575.5
CDS GCA 72 bp AGCCATCAGCCTGTGGAAGTTTCCTGGGCAGGCAGATaGGGGGTTCTGGCAGCCGGGGGACGTGCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: SHQPVEVSWAGR*GVLAAGGRAAV
Trigger: CACAGCTGCACGTCCCCCGGCTGCCAGAACCCCGCATCTGCCTGCCCAGGAAACTTCCACAGGCTGATGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS CAA 72 bp ACGCTCGCCAATCAGGGGCTCGGAAGTCCACGTTGTTaGTATCCGCCCCTTCAACGCGCGGACGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: TLANQGLGSPRC*YPPLQRADGRQ
Trigger: CTGCCGCCCGTCCGCGCGTTGAAGGGGCGGATACAAACAACGTGGACTTCCGAGCCCCTGATTGGCGAGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535977.5
ENST00000569575.5
CDS CCA 72 bp GATGCGGGGTTCTGGCAGCCGGGGGACGTGCAGCTGTaGAAGCTAAGTGTCCTCTCGGCCAGTCCATCAGTG +
Preference number: 6 (lower is better)
Translates to: DAGFWQPGDVQL*KLSVLSASPSV
Trigger: CACTGATGGACTGGCCGAGAGGACACTTAGCTTCCACAGCTGCACGTCCCCCGGCTGCCAGAACCCCGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS GCA 72 bp AAGGTCATGCAGTTCTTCTCTGCGTACGCGCGGGCCTaGTCCGTCGGGACCTGCCGCTCATCGATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: KVMQFFSAYARA*SVGTCRSSISL
Trigger: CAAGGAGATCGATGAGCGGCAGGTCCCGACGGAGCAGGCCCGCGCGTACGCAGAGAAGAACTGCATGACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563109.1
CDS CCA 72 bp CTGTGGAAGTTTCCTGGGCAGGCAGATGCGGGGTTCTaGCAGCCGGGGGACGTGCAGCTGTGGAAGCTAAGT +
Preference number: 6 (lower is better)
Translates to: LWKFPGQADAGF*QPGDVQLWKLS
Trigger: ACTTAGCTTCCACAGCTGCACGTCCCCCGGCTGCCAGAACCCCGCATCTGCCTGCCCAGGAAACTTCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565511.5
CDS GCA 72 bp AGGGCATTGGGCAAAGGCAGGGCGTGGACTCCAGCGTaGCTGGAGAAAGGGCAGTGCCTTTATTTCCACCCT +
Preference number: 6 (lower is better)
Translates to: RALGKGRAWTPA*LEKGQCLYFHP
Trigger: AGGGTGGAAATAAAGGCACTGCCCTTTCTCCAGGCACGCTGGAGTCCACGCCCTGCCTTTGCCCAATGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CCA 72 bp CATTGGGCAAAGGCAGGGCGTGGACTCCAGCGTGCCTaGAGAAAGGGCAGTGCCTTTATTTCCACCCTGACC +
Preference number: 6 (lower is better)
Translates to: HWAKAGRGLQRA*RKGSAFISTLT
Trigger: GGTCAGGGTGGAAATAAAGGCACTGCCCTTTCTCCAGGCACGCTGGAGTCCACGCCCTGCCTTTGCCCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS GCA 72 bp AGGGCGTGGACTCCAGCGTGCCTGGAGAAAGGGCAGTaGCTTTATTTCCACCCTGACCTACTTCGTATGCAT +
Preference number: 6 (lower is better)
Translates to: RAWTPACLEKGQ*LYFHPDLLRMH
Trigger: ATGCATACGAAGTAGGTCAGGGTGGAAATAAAGGCACTGCCCTTTCTCCAGGCACGCTGGAGTCCACGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS GCA 72 bp TCTCCAAGGCGAATGTATTTCCAAGTCTCGGCTTACTaGAGCCCAGGAACTGCCAAGGTTGGTGTTAGGGAG +
Preference number: 6 (lower is better)
Translates to: SPRRMYFQVSAY*SPGTAKVGVRE
Trigger: CTCCCTAACACCAACCTTGGCAGTTCCTGGGCTGCAGTAAGCCGAGACTTGGAAATACATTCGCCTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CAA 90 bp AAGGGCAGTGCCTTTATTTCCACCCTGACCTACTTCGTATGCATTTaGAAGTTGAATTCTCCAAGGCGAATGTATTTCCAAGTCTCGGCT +
Preference number: 6 (lower is better)
Translates to: KGSAFISTLTYFVCI*KLNSPRRMYFQVSA
Trigger: AGCCGAGACTTGGAAATACATTCGCCTTGGAGAATTCAACTTCAAAATGCATACGAAGTAGGTCAGGGTGGAAATAAAGGCACTGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CAA 90 bp AGTGCCTTTATTTCCACCCTGACCTACTTCGTATGCATTTTGAAGTaGAATTCTCCAAGGCGAATGTATTTCCAAGTCTCGGCTTACTGC +
Preference number: 6 (lower is better)
Translates to: SAFISTLTYFVCILK*NSPRRMYFQVSAYC
Trigger: GCAGTAAGCCGAGACTTGGAAATACATTCGCCTTGGAGAATTCAACTTCAAAATGCATACGAAGTAGGTCAGGGTGGAAATAAAGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CAA 72 bp ATTTCCACCCTGACCTACTTCGTATGCATTTTGAAGTaGAATTCTCCAAGGCGAATGTATTTCCAAGTCTCG +
Preference number: 6 (lower is better)
Translates to: ISTLTYFVCILK*NSPRRMYFQVS
Trigger: CGAGACTTGGAAATACATTCGCCTTGGAGAATTCAACTTCAAAATGCATACGAAGTAGGTCAGGGTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564703.1
CDS CAA 72 bp GCCTTTATTTCCACCCTGACCTACTTCGTATGCATTTaGAAGTTGAATTCTCCAAGGCGAATGTATTTCCAA +
Preference number: 6 (lower is better)
Translates to: AFISTLTYFVCI*KLNSPRRMYFQ
Trigger: TTGGAAATACATTCGCCTTGGAGAATTCAACTTCAAAATGCATACGAAGTAGGTCAGGGTGGAAATAAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564703.1