RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB40B (Homo sapiens)

Ensembl gene IDs: ENSG00000141542

Ensembl transcript IDs: ENST00000269347.10, ENST00000570676.1, ENST00000571554.5, ENST00000571880.1, ENST00000571995.6, ENST00000572603.1, ENST00000574132.5, ENST00000576359.1

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTCCCCGTGGCTGCCGTGCCCAGGTGGCCAGACACCCCCAAGCCTaGGTCCACCCGCAGGGACCAGTGCTCCTCTCTCCTGTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: CPRGCRAQVARHPQA*VHPQGPVLLSPVWA
Trigger: GGCCCAGACAGGAGAGAGGAGCACTGGTCCCTGCGGGTGGACCCAGGCTTGGGGGTGTCTGGCCACCTGGGCACGGCAGCCACGGGGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp ATCTCGGGGAGCCTCCTTGCTACATGTTCCGCTTCTGGGGACTTCTaGTGGTGTTTCCCTGGAGGGCCAAGGCCTCCGGGCGGCCCGTGC +
Preference number: 1 (lower is better)
Translates to: ISGSLLATCSASGDF*WCFPGGPRPPGGPC
Trigger: GCACGGGCCGCCCGGAGGCCTTGGCCCTCCAGGGAAACACCACCAGAAGTCCCCAGAAGCGGAACATGTAGCAAGGAGGCTCCCCGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp GGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTaGACAGGTCTTTGCAGCGTGCCTGCACGAGGCTGGCCACCCTCT +
Preference number: 1 (lower is better)
Translates to: GPVVLTPPVAQQREG*TGLCSVPARGWPPS
Trigger: AGAGGGTGGCCAGCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp CCTTGCTACATGTTCCGCTTCTGGGGACTTCTGGTGGTGTTTCCCTaGAGGGCCAAGGCCTCCGGGCGGCCCGTGCATTCGGTGAACACC +
Preference number: 1 (lower is better)
Translates to: PCYMFRFWGLLVVFP*RAKASGRPVHSVNT
Trigger: GGTGTTCACCGAATGCACGGGCCGCCCGGAGGCCTTGGCCCTCCAGGGAAACACCACCAGAAGTCCCCAGAAGCGGAACATGTAGCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR TCA 90 bp CAGGGAAGAGAGCGGCCCTGGAGGTCTTTGCGGTCAGCCCTGCTCTaGGGCAGTCGGGGTCAGGGGCTACATCTTCATGCGGAATTCCTG +
Preference number: 1 (lower is better)
Translates to: QGRERPWRSLRSALL*GSRGQGLHLHAEFL
Trigger: CAGGAATTCCGCATGAAGATGTAGCCCCTGACCCCGACTGCCTCAGAGCAGGGCTGACCGCAAAGACCTCCAGGGCCGCTCTCTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp GTGACCAGGGAAGAGAGCGGCCCTGGAGGTCTTTGCGGTCAGCCCTaGTCTGAGGCAGTCGGGGTCAGGGGCTACATCTTCATGCGGAAT +
Preference number: 1 (lower is better)
Translates to: VTREESGPGGLCGQP*SEAVGVRGYIFMRN
Trigger: ATTCCGCATGAAGATGTAGCCCCTGACCCCGACTGCCTCAGAGCAGGGCTGACCGCAAAGACCTCCAGGGCCGCTCTCTTCCCTGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp ACGTTCAACAGTGTGACCAGGGAAGAGAGCGGCCCTGGAGGTCTTTaGGGTCAGCCCTGCTCTGAGGCAGTCGGGGTCAGGGGCTACATC +
Preference number: 1 (lower is better)
Translates to: TFNSVTREESGPGGL*GQPCSEAVGVRGYI
Trigger: GATGTAGCCCCTGACCCCGACTGCCTCAGAGCAGGGCTGACCGCAAAGACCTCCAGGGCCGCTCTCTTCCCTGGTCACACTGTTGAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp GTGTTTGCAGCTGGGAGGTCGGCCCTGTCGTTCTCACCCCACCTGTaGCACAGCAGAGAGAAGGGTGCACAGGTCTTTGCAGCGTGCCTG +
Preference number: 1 (lower is better)
Translates to: VFAAGRSALSFSPHL*HSREKGAQVFAACL
Trigger: CAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTCCCAGCTGCAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp CTTGGCAGGGCTGTGCTCCCTCTGGGAGATCTCGGGGAGCCTCCTTaGTACATGTTCCGCTTCTGGGGACTTCTGGTGGTGTTTCCCTGG +
Preference number: 1 (lower is better)
Translates to: LGRAVLPLGDLGEPP*YMFRFWGLLVVFPW
Trigger: CCAGGGAAACACCACCAGAAGTCCCCAGAAGCGGAACATGTAGCAAGGAGGCTCCCCGAGATCTCCCAGAGGGAGCACAGCCCTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp CAAGCCTGGGTCCACCCGCAGGGACCAGTGCTCCTCTCTCCTGTCTaGGCCTCGGTTCCACCATCTCTGAATACAGGCTTTGCCCCTGAT +
Preference number: 1 (lower is better)
Translates to: QAWVHPQGPVLLSPV*ASVPPSLNTGFAPD
Trigger: ATCAGGGGCAAAGCCTGTATTCAGAGATGGTGGAACCGAGGCCCAGACAGGAGAGAGGAGCACTGGTCCCTGCGGGTGGACCCAGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR TCA 90 bp GTCCCTCATTTGCGACCCCCAGCCACAGAGAAACGTTCAACAGTGTaGCCAGGGAAGAGAGCGGCCCTGGAGGTCTTTGCGGTCAGCCCT +
Preference number: 1 (lower is better)
Translates to: VPHLRPPATEKRSTV*PGKRAALEVFAVSP
Trigger: AGGGCTGACCGCAAAGACCTCCAGGGCCGCTCTCTTCCCTGGTCACACTGTTGAACGTTTCTCTGTGGCTGGGGGTCGCAAATGAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp ACACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATaGATCCACCAGCTGCCGGGGGTAACGCCGAGCTTCTCCTGGAGA +
Preference number: 1 (lower is better)
Translates to: THSQAAFAERNRDLR*IHQLPGVTPSFSWR
Trigger: TCTCCAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
3UTR TCA 90 bp TGTTTCCCTGGAGGGCCAAGGCCTCCGGGCGGCCCGTGCATTCGGTaGACACCTCCAAAGAGCTCTGAGTCACAAAGCCTTGGGAAACTT +
Preference number: 1 (lower is better)
Translates to: CFPGGPRPPGGPCIR*TPPKSSESQSLGKL
Trigger: AAGTTTCCCAAGGCTTTGTGACTCAGAGCTCTTTGGAGGTGTTCACCGAATGCACGGGCCGCCCGGAGGCCTTGGCCCTCCAGGGAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp AGCCGGAAGTCCAAAACCAATAACTTGGCAGGGCTGTGCTCCCTCTaGGAGATCTCGGGGAGCCTCCTTGCTACATGTTCCGCTTCTGGG +
Preference number: 1 (lower is better)
Translates to: SRKSKTNNLAGLCSL*EISGSLLATCSASG
Trigger: CCCAGAAGCGGAACATGTAGCAAGGAGGCTCCCCGAGATCTCCCAGAGGGAGCACAGCCCTGCCAAGTTATTGGTTTTGGACTTCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp GAGGCCCCTCAACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTaGATCTCAGTGTCCTTGTGTTTGCAGCTGGGAGGTCGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: EAPQRGFLQRGLSFL*ISVSLCLQLGGRPC
Trigger: ACAGGGCCGACCTCCCAGCTGCAAACACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTTGAGGGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp CACCATCAGCGAGCTGGGAACGGAGGGAGAAGAGGCCCCTCAACGTaGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTC +
Preference number: 1 (lower is better)
Translates to: HHQRAGNGGRRGPST*VSSTWTLLSVHLSV
Trigger: GACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTTGAGGGGCCTCTTCTCCCTCCGTTCCCAGCTCGCTGATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp TTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTaGGAACGGAGGGAGAAGAGGCCCCTCAACGTGGGTTTCTTCAAC +
Preference number: 1 (lower is better)
Translates to: LQWEDPFPYPSPSAS*ERREKRPLNVGFFN
Trigger: GTTGAAGAAACCCACGTTGAGGGGCCTCTTCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp GGTTTCGTCTGTTTTTGTTCTGCCTTGGTTTGCTGTAGCACTTTCTaGCGTGAGCGTAACTCACTTCCTTGTAGGAGTTTCCTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: GFVCFCSALVCCSTF*RERNSLPCRSFLRL
Trigger: CAGCCTCAGGAAACTCCTACAAGGAAGTGAGTTACGCTCACGGCAGAAAGTGCTACAGCAAACCAAGGCAGAACAAAAACAGACGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 90 bp AATCCTTTCTCAACAGGCGACAACAGTTCAAGGATTCAGCCTTGTTaGCAGTGTCGTGTATTAGCTCCGATATGTGATGTCTACACCAGG +
Preference number: 1 (lower is better)
Translates to: NPFSTGDNSSRIQPC*QCRVLAPICDVYTR
Trigger: CCTGGTGTAGACATCACATATCGGAGCTAATACACGACACTGGCAACAAGGCTGAATCCTTGAACTGTTGTCGCCTGTTGAGAAAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp GGAAGGAAGAGAAAAATACAGGTTTGGCCTGGTTTAATGTTGCAATaGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: GRKRKIQVWPGLMLQ*EDPFPYPSPSASWE
Trigger: TTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCAGGCCAAACCTGTATTTTTCTCTTCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 90 bp CAGTGTCGTGTATTAGCTCCGATATGTGATGTCTACACCAGGCAGTaGCGCAGTGAAGTAAAGGGCTATAAGAAATACACAAAATCTGGC +
Preference number: 1 (lower is better)
Translates to: QCRVLAPICDVYTRQ*RSEVKGYKKYTKSG
Trigger: GCCAGATTTTGTGTATTTCTTATAGCCCTTTACTTCACTGCGCCACTGCCTGGTGTAGACATCACATATCGGAGCTAATACACGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCGTGCCTGCACGAGGCTaGCCACCCTCTCCAGACACT +
Preference number: 2 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCVPARG*PPSPDT
Trigger: AGTGTCTGGAGAGGGTGGCCAGCCTCGTGCAGGCAC...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp CACAGCAGAGAGAAGGGTGCACAGGTCTTTGCAGCGTGCCTGCACGAGGCTGGCGGAAGAGAGCGGCCCTaGAGGTCTTTGCGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: HSREKGAQVFAACLHEAGGRERP*RSLRSA
Trigger: GGCTGACCGCAAAGACCTCCAGGGCCGCTCTCTTCC...GCCAGCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CAA 90 bp ACTTGGCAGGGCTGTGCTCCCTCTGGGAGATCTCGGGGAGCCTCCTaGCTACATGTTCCGCTTCTGGGGACTTCTGGTGGTGTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: TWQGCAPSGRSRGAS*LHVPLLGTSGGVSL
Trigger: CAGGGAAACACCACCAGAAGTCCCCAGAAGCGGAACATGTAGCAAGGAGGCTCCCCGAGATCTCCCAGAGGGAGCACAGCCCTGCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR TCA 90 bp CACAGCAGAGAGAAGGGTGCACAGGTCTTTGCAGCGTGCCTGCACGAGGCTGGCAAACGTTCAACAGTGTaGCCAGGGAAGAGAGCGGCC +
Preference number: 2 (lower is better)
Translates to: HSREKGAQVFAACLHEAGKRSTV*PGKRAA
Trigger: GGCCGCTCTCTTCCCTGGTCACACTGTTGAACGTTT...GCCAGCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR GCA 90 bp CACAGCAGAGAGAAGGGTGCACAGGTCTTTGCAGCGTGCCTGCACGAGGCTGGCGGGGCTACATCTTCATaGGGAATTCCTGACAGCCCC +
Preference number: 2 (lower is better)
Translates to: HSREKGAQVFAACLHEAGGATSS*GIPDSP
Trigger: GGGGCTGTCAGGAATTCCGCATGAAGATGTAGCCCC...GCCAGCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTACGCCGAGCTTCTCCTaGAGAGATTCCGCCGTGTTT +
Preference number: 2 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGTPSFS*RDSAVF
Trigger: AAACACGGCGGAATCTCTCCAGGAGAAGCTCGGCGT...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
3UTR-3UTR GCA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCAAACCGGGATCTGAGATaGATCCACCAGCTGCCGGGG +
Preference number: 2 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAANRDLR*IHQLPG
Trigger: CCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTT...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
3UTR-3UTR GCA 90 bp GGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAACGGAGGGAGAAACCGGGATCTGAGATaGATCCACCAGCTGCCGGGG +
Preference number: 2 (lower is better)
Translates to: GRIHFLTLHHQRAGNGGRNRDLR*IHQLPG
Trigger: CCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTT...TCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CAA 90 bp GGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTaGTGTTTGCAGCTGGGAGGTCGGCCCTGTCGTTCTCACCCCACC +
Preference number: 2 (lower is better)
Translates to: GFLQRGLSFLCISVS*CLQLGGRPCRSHPT
Trigger: GGTGGGGTGAGAACGACAGGGCCGACCTCCCAGCTGCAAACACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp GGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAACGGAGGGAGAGTCTACACCAGGCAGTaGCGCAGTGAAGTAAAGGGC +
Preference number: 2 (lower is better)
Translates to: GRIHFLTLHHQRAGNGGRVYTRQ*RSEVKG
Trigger: GCCCTTTACTTCACTGCGCCACTGCCTGGTGTAGAC...TCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTGCTGCCGTGCCCAGGTaGCCAGACACCCCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCAAVPR*PDTPKP
Trigger: AGGCTTGGGGGTGTCTGGCCACCTGGGCACGGCAGC...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAACGCCGAGCTTCTCCTaGAGAGATTCCGCCGTGTTT +
Preference number: 2 (lower is better)
Translates to: TFASSIRREEPGSEMHPPTPSFS*RDSAVF
Trigger: AAACACGGCGGAATCTCTCCAGGAGAAGCTCGGCGT...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
3UTR-3UTR CCA 90 bp TGGTTTAATGTTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGAGACACCCCCAAGCCTaGGTCCACCCGCAGGGACCA +
Preference number: 2 (lower is better)
Translates to: WFNVAMGGSISLPFTISERHPQA*VHPQGP
Trigger: TGGTCCCTGCGGGTGGACCCAGGCTTGGGGGTGTCT...CTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR GCA 90 bp TGGTTTAATGTTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGGGCCCTGGAGGTCTTTaGGGTCAGCCCTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: WFNVAMGGSISLPFTISEGPGGL*GQPCSE
Trigger: CTCAGAGCAGGGCTGACCGCAAAGACCTCCAGGGCC...CTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCATTTCATACACAAACTaGACAGATCAGTTGCACATA +
Preference number: 2 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCISYTN*TDQLHI
Trigger: TATGTGCAACTGATCTGTCCAGTTTGTGTATGAAAT...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR TCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCAGAGGAACCGGGATCTaGGATGCATCCACCAGCTGC +
Preference number: 2 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFRGTGI*DASTSC
Trigger: GCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCT...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
3UTR-3UTR TCA 90 bp AGGAAGAGAAAAATACAGGTTTGGCCTGGTTTAATGTTGCAATGGGAGGATCCATTCATGCGGAATTCCTaGCAGCCCCTCGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: RKRKIQVWPGLMLQWEDPFMRNS*QPLGAP
Trigger: AGGAGCTCCGAGGGGCTGTCAGGAATTCCGCATGAA...TGGATCCTCCCATTGCAACATTAAACCAGGCCAAACCTGTATTTTTCTCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp AGGAAGAGAAAAATACAGGTTTGGCCTGGTTTAATGTTGCAATGGGAGGATCCACTCCTCTCTCCTGTCTaGGCCTCGGTTCCACCATCT +
Preference number: 2 (lower is better)
Translates to: RKRKIQVWPGLMLQWEDPLLSPV*ASVPPS
Trigger: AGATGGTGGAACCGAGGCCCAGACAGGAGAGAGGAG...TGGATCCTCCCATTGCAACATTAAACCAGGCCAAACCTGTATTTTTCTCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR TCA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTGAAACAGCTCTTCCTTaGCATGTCGAAACTGTGCTG +
Preference number: 2 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCETALP*HVETVL
Trigger: CAGCACAGTTTCGACATGTCAAGGAAGAGCTGTTTC...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CCA 90 bp AGGAAGAGAAAAATACAGGTTTGGCCTGGTTTAATGTTGCAATGGGAGGATCCAAGAGGCCCCTCAACGTaGGTTTCTTCAACGTGGACT +
Preference number: 2 (lower is better)
Translates to: RKRKIQVWPGLMLQWEDPRGPST*VSSTWT
Trigger: AGTCCACGTTGAAGAAACCCACGTTGAGGGGCCTCT...TGGATCCTCCCATTGCAACATTAAACCAGGCCAAACCTGTATTTTTCTCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CAA 90 bp TACTTAGTCCGGTCTGTATTAGGTTTCGTCTGTTTTTGTTCTGCCTaGGTTTGCTGTAGCACTTTCTGCCGTGAGCGTAACTCACTTCCT +
Preference number: 2 (lower is better)
Translates to: YLVRSVLGFVCFCSA*VCCSTFCRERNSLP
Trigger: AGGAAGTGAGTTACGCTCACGGCAGAAAGTGCTACAGCAAACCAAGGCAGAACAAAAACAGACGAAACCTAATACAGACCGGACTAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR TCA 90 bp AAATTCGAAAGAACCGGTCGCCAACTCTACCAAGAGAGAAACAACTATACATTTCACTTCATTCTTTACTaGAACAGCTCTTCCTTGACA +
Preference number: 2 (lower is better)
Translates to: KFERTGRQLYQERNNYTFHFILY*NSSSLT
Trigger: TGTCAAGGAAGAGCTGTTTCAGTAAAGAATGAAGTG...AAATGTATAGTTGTTTCTCTCTTGGTAGAGTTGGCGACCGGTTCTTTCGAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR GCA 90 bp AATACAAAATTCGAAAGAACCGGTCGCCAACTCTACCAAGAGAGAAACAACTATTTATCCCGCTGCCATTaGTTCTCAAATTCCATTGAA +
Preference number: 2 (lower is better)
Translates to: NTKFERTGRQLYQERNNYLSRCH*FSNSIE
Trigger: TTCAATGGAATTTGAGAAGCAATGGCAGCGGGATAA...ATAGTTGTTTCTCTCTTGGTAGAGTTGGCGACCGGTTCTTTCGAATTTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp CCCGTGGACTTTGTCCCCGTGGCTGCCGTGCCCAGGTaGCCAGACACCCCCAAGCCTGGGTCCACCCGCAGG +
Preference number: 3 (lower is better)
Translates to: PVDFVPVAAVPR*PDTPKPGSTRR
Trigger: CCTGCGGGTGGACCCAGGCTTGGGGGTGTCTGGCCACCTGGGCACGGCAGCCACGGGGACAAAGTCCACGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 72 bp GACACCCCCAAGCCTGGGTCCACCCGCAGGGACCAGTaGTCCTCTCTCCTGTCTGGGCCTCGGTTCCACCAT +
Preference number: 3 (lower is better)
Translates to: DTPKPGSTRRDQ*SSLLSGPRFHH
Trigger: ATGGTGGAACCGAGGCCCAGACAGGAGAGAGGAGCACTGGTCCCTGCGGGTGGACCCAGGCTTGGGGGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR TCA 72 bp GAGCGGCCCTGGAGGTCTTTGCGGTCAGCCCTGCTCTaGGGCAGTCGGGGTCAGGGGCTACATCTTCATGCG +
Preference number: 3 (lower is better)
Translates to: ERPWRSLRSALL*GSRGQGLHLHA
Trigger: CGCATGAAGATGTAGCCCCTGACCCCGACTGCCTCAGAGCAGGGCTGACCGCAAAGACCTCCAGGGCCGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp ATGTTCCGCTTCTGGGGACTTCTGGTGGTGTTTCCCTaGAGGGCCAAGGCCTCCGGGCGGCCCGTGCATTCG +
Preference number: 3 (lower is better)
Translates to: MFRFWGLLVVFP*RAKASGRPVHS
Trigger: CGAATGCACGGGCCGCCCGGAGGCCTTGGCCCTCCAGGGAAACACCACCAGAAGTCCCCAGAAGCGGAACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR TCA 72 bp GGAGGGCCAAGGCCTCCGGGCGGCCCGTGCATTCGGTaGACACCTCCAAAGAGCTCTGAGTCACAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: GGPRPPGGPCIR*TPPKSSESQSL
Trigger: AAGGCTTTGTGACTCAGAGCTCTTTGGAGGTGTTCACCGAATGCACGGGCCGCCCGGAGGCCTTGGCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 72 bp CAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATaGATCCACCAGCTGCCGGGGGTAACGCCGAGCTTC +
Preference number: 3 (lower is better)
Translates to: QAAFAERNRDLR*IHQLPGVTPSF
Trigger: GAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
3UTR GCA 72 bp CACAGCAGAGAGAAGGGTGCACAGGTCTTTGCAGCGTaGCTGCACGAGGCTGGCCACCCTCTCCAGACACTG +
Preference number: 3 (lower is better)
Translates to: HSREKGAQVFAA*LHEAGHPLQTL
Trigger: CAGTGTCTGGAGAGGGTGGCCAGCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 72 bp GTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTaGACAGGTCTTTGCAGCGTGCCTGCACGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: VLTPPVAQQREG*TGLCSVPARGW
Trigger: CCAGCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp GCTGGGAGGTCGGCCCTGTCGTTCTCACCCCACCTGTaGCACAGCAGAGAGAAGGGTGCACAGGTCTTTGCA +
Preference number: 3 (lower is better)
Translates to: AGRSALSFSPHL*HSREKGAQVFA
Trigger: TGCAAAGACCTGTGCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 72 bp GCTGTGCTCCCTCTGGGAGATCTCGGGGAGCCTCCTTaGTACATGTTCCGCTTCTGGGGACTTCTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: AVLPLGDLGEPP*YMFRFWGLLVV
Trigger: CACCACCAGAAGTCCCCAGAAGCGGAACATGTAGCAAGGAGGCTCCCCGAGATCTCCCAGAGGGAGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR TCA 72 bp TTGCGACCCCCAGCCACAGAGAAACGTTCAACAGTGTaGCCAGGGAAGAGAGCGGCCCTGGAGGTCTTTGCG +
Preference number: 3 (lower is better)
Translates to: LRPPATEKRSTV*PGKRAALEVFA
Trigger: CGCAAAGACCTCCAGGGCCGCTCTCTTCCCTGGTCACACTGTTGAACGTTTCTCTGTGGCTGGGGGTCGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp ATCCACCAGCTGCCGGGGGTAACGCCGAGCTTCTCCTaGAGAGATTCCGCCGTGTTTCTTTCAGTGCCTTCC +
Preference number: 3 (lower is better)
Translates to: IHQLPGVTPSFS*RDSAVFLSVPS
Trigger: GGAAGGCACTGAAAGAAACACGGCGGAATCTCTCCAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
3UTR CCA 72 bp GATCTCGGGGAGCCTCCTTGCTACATGTTCCGCTTCTaGGGACTTCTGGTGGTGTTTCCCTGGAGGGCCAAG +
Preference number: 3 (lower is better)
Translates to: DLGEPPCYMFRF*GLLVVFPWRAK
Trigger: CTTGGCCCTCCAGGGAAACACCACCAGAAGTCCCCAGAAGCGGAACATGTAGCAAGGAGGCTCCCCGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CAA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTGCCTCCCCGTGGACTTaGTCCCCGTGGCTGCCGTGC +
Preference number: 3 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCASPWT*SPWLPC
Trigger: GCACGGCAGCCACGGGGACAAAGTCCACGGGGAGGC...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp CCTTTCTGTGCATCTCAGTGTCCTTGTGTTTGCAGCTaGGAGGTCGGCCCTGTCGTTCTCACCCCACCTGTG +
Preference number: 3 (lower is better)
Translates to: PFCASQCPCVCS*EVGPVVLTPPV
Trigger: CACAGGTGGGGTGAGAACGACAGGGCCGACCTCCCAGCTGCAAACACAAGGACACTGAGATGCACAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp CGAGCTGGGAACGGAGGGAGAAGAGGCCCCTCAACGTaGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCAT +
Preference number: 3 (lower is better)
Translates to: RAGNGGRRGPST*VSSTWTLLSVH
Trigger: ATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTTGAGGGGCCTCTTCTCCCTCCGTTCCCAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CAA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCAACTGGACAGATCAGTaGCACATAACCTCTACATCT +
Preference number: 3 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCNWTDQ*HITSTS
Trigger: AGATGTAGAGGTTATGTGCAACTGATCTGTCCAGTT...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR TCA 72 bp GCCGTGAGCGTAACTCACTTCCTTGTAGGAGTTTCCTaGGGCTGCCGTAACAATCGCCACAAACCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: AVSVTHFLVGVS*GCRNNRHKPGD
Trigger: GTCACCAGGTTTGTGGCGATTGTTACGGCAGCCTCAGGAAACTCCTACAAGGAAGTGAGTTACGCTCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp GGGAGAAGAGGCCCCTCAACGTGGGTTTCTTCAACGTaGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTG +
Preference number: 3 (lower is better)
Translates to: GRRGPSTWVSST*TLLSVHLSVLV
Trigger: CACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTTGAGGGGCCTCTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CAA 90 bp AGTCCCTCATTTGCGACCCCCAGCCACAGAGAAACGTTCAACAGTGTGACCAGGAAGGATTCAGCCTTGTaGCCAGTGTCGTGTATTAGC +
Preference number: 3 (lower is better)
Translates to: SPSFATPSHRETFNSVTRKDSAL*PVSCIS
Trigger: GCTAATACACGACACTGGCAACAAGGCTGAATCCTT...CCTGGTCACACTGTTGAACGTTTCTCTGTGGCTGGGGGTCGCAAATGAGGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR-3UTR CAA 90 bp GATTTCTCAGACAGGCACATGCCTGGGTGCCAGCTTTTAACTCTCCGCTCTCTCTTCAAGGATTCAGCCTaGTTGCCAGTGTCGTGTATT +
Preference number: 3 (lower is better)
Translates to: DFSDRHMPGCQLLTLRSLFKDSA*LPVSCI
Trigger: AATACACGACACTGGCAACAAGGCTGAATCCTTGAA...GAGAGAGCGGAGAGTTAAAAGCTGGCACCCAGGCATGTGCCTGTCTGAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR TCA 72 bp CGGCCCGTGCATTCGGTGAACACCTCCAAAGAGCTCTaGGTCACAAAGCCTTGGGAAACTTTATTTTATTCT +
Preference number: 3 (lower is better)
Translates to: RPVHSVNTSKEL*VTKPWETLFYS
Trigger: AGAATAAAATAAAGTTTCCCAAGGCTTTGTGACTCAGAGCTCTTTGGAGGTGTTCACCGAATGCACGGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 72 bp TCAACAGGCGACAACAGTTCAAGGATTCAGCCTTGTTaGCAGTGTCGTGTATTAGCTCCGATATGTGATGTC +
Preference number: 3 (lower is better)
Translates to: STGDNSSRIQPC*QCRVLAPICDV
Trigger: GACATCACATATCGGAGCTAATACACGACACTGGCAACAAGGCTGAATCCTTGAACTGTTGTCGCCTGTTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR GCA 72 bp GTATTAGGTTTCGTCTGTTTTTGTTCTGCCTTGGTTTaGTGTAGCACTTTCTGCCGTGAGCGTAACTCACTT +
Preference number: 3 (lower is better)
Translates to: VLGFVCFCSALV*CSTFCRERNSL
Trigger: AAGTGAGTTACGCTCACGGCAGAAAGTGCTACAGCAAACCAAGGCAGAACAAAAACAGACGAAACCTAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CCA 72 bp GTATTAGCTCCGATATGTGATGTCTACACCAGGCAGTaGCGCAGTGAAGTAAAGGGCTATAAGAAATACACA +
Preference number: 3 (lower is better)
Translates to: VLAPICDVYTRQ*RSEVKGYKKYT
Trigger: TGTGTATTTCTTATAGCCCTTTACTTCACTGCGCCACTGCCTGGTGTAGACATCACATATCGGAGCTAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCCCAGGTGCACCGGCGTaGAGGACACGACCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ASSIRREEPGSEMHPPAAPGAPA*RTRPPG
Trigger: GCCGGGCGGTCGTGTCCTGCACGCCGGTGCACCTGG...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR CCA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCCTGGTGGTGTTTCCCTaGAGGGCCAAGGCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCLVVFP*RAKASG
Trigger: CCCGGAGGCCTTGGCCCTCCAGGGAAACACCACCAG...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCGGGCTGTGCTCCCTCTaGGAGATCTCGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCGLCSL*EISGSL
Trigger: GAGGCTCCCCGAGATCTCCCAGAGGGAGCACAGCCC...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTTGCTCCGTGGGCACCTaGCGCTTGAACGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGCSVGT*RLNARC
Trigger: GCACCTGGCGTTCAAGCGGCAGGTGCCCACGGAGCA...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTGCAAGCTCAGCACCTTaGTCGGCCGCCAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGASSAP*SAARAG
Trigger: ACCGGCTCTGGCGGCCGAGCAAGGTGCTGAGCTTGC...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR CCA 90 bp CCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTAACGCCGAGCTTCTCCTGTCTCCAGGGCAGCGCTaGCCCTCGGACTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: PGSEMHPPAAGGNAELLLSPGQR*PSDFAT
Trigger: TGTGGCAAAGTCCGAGGGCCAGCGCTGCCCTGGAGA...CAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR GCA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCACCAGGTGCACCGGCGTaGAGGACACGACCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TFASSIRREEPGSEMHPPPGAPA*RTRPPG
Trigger: GCCGGGCGGTCGTGTCCTGCACGCCGGTGCACCTGG...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR CCA 90 bp CACAGCAGAGAGAAGGGTGCACAGGTCTTTGCAGCGTGCCTGCACGAGGCTGGCGTGCCTGCACGAGGCTaGCCACCCTCTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: HSREKGAQVFAACLHEAGVPARG*PPSPDT
Trigger: AGTGTCTGGAGAGGGTGGCCAGCCTCGTGCAGGCAC...GCCAGCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTACCCCGAGGGCACAGTaGAGACAAAGCCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGTPRAQ*RQSPVL
Trigger: GAGGACAGGGCTTTGTCTGCACTGTGCCCTCGGGGT...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTAACCGGGATCTGAGATaGATCCACCAGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGNRDLR*IHQLPG
Trigger: CCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTT...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGCCCTGGAGGTCTTTaGGGTCAGCCCTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ASSIRREEPGSEMHPPAAGPGGL*GQPCSE
Trigger: CTCAGAGCAGGGCTGACCGCAAAGACCTCCAGGGCC...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCCCTTGTGTTTGCAGCTaGGAGGTCGGCCCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCPCVCS*EVGPVV
Trigger: AACGACAGGGCCGACCTCCCAGCTGCAAACACAAGG...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTCTGGCCCTCGGACTTTaGCACAGCGACATCCGAACT +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGLALGL*HSDIRT
Trigger: AGTTCGGATGTCGCTGTGGCAAAGTCCGAGGGCCAG...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR GCA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCACAGGATCACACCCTGTaGGCCCCGGGAGTAGGAGCG +
Preference number: 4 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAAQDHTL*APGVGA
Trigger: CGCTCCTACTCCCGGGGCGCACAGGGTGTGATCCTG...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCACTTTGTCCCCGTGGCTaGCGTGCCCAGGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQALCPRG*RAQVAR
Trigger: TCTGGCCACCTGGGCACGGCAGCCACGGGGACAAAG...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCTTCTCACCCCACCTGTaGCACAGCAGAGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCFSPHL*HSREKG
Trigger: ACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAA...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CAA 72 bp GGCTGTGCTCCCTCTGGGAGATCTCGGGGAGCCTCCTaGCTACATGTTCCGCTTCTGGGGACTTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GCAPSGRSRGAS*LHVPLLGTSGG
Trigger: ACCACCAGAAGTCCCCAGAAGCGGAACATGTAGCAAGGAGGCTCCCCGAGATCTCCCAGAGGGAGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTCGGTTCCACCATCTCTaGATACAGGCTTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGRFHHL*IQALPL
Trigger: CAGGGGCAAAGCCTGTATTCAGAGATGGTGGAACCG...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGTCCCTCATTTGCGACCCCCAGCCACAGAGAAACGTTCAACAGTGTGACCAGGTGCTCCGTGGGCACCTaGCGCTTGAACGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SPSFATPSHRETFNSVTRCSVGT*RLNARC
Trigger: GCACCTGGCGTTCAAGCGGCAGGTGCCCACGGAGCA...CCTGGTCACACTGTTGAACGTTTCTCTGTGGCTGGGGGTCGCAAATGAGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAAGCCGGTCCATCCCATaGCGCAGCAGCACGATCCTG +
Preference number: 4 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQASRSIP*RSSTIL
Trigger: CAGGATCGTGCTGCTGCGGCATGGGATGGACCGGCT...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTGGGGCTACATCTTCATaGGGAATTCCTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGGATSS*GIPDSP
Trigger: GGGGCTGTCAGGAATTCCGCATGAAGATGTAGCCCC...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp GGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAACGGAGGGAGATCGCCCAGGCTGGGGTaGAGTGGTACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GRIHFLTLHHQRAGNGGRSPRLG*SGTISA
Trigger: AGCCGAGATCGTACCACTGCACCCCAGCCTGGGCGA...TCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTCAGCAGAGAGAAGGGTaGACAGGTCTTTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGQQREG*TGLCSV
Trigger: CACGCTGCAAAGACCTGTGCACCCTTCTCTCTGCTG...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp GGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAACGGAGGGAGAGGAAGAGAGCGGCCCTaGAGGTCTTTGCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRIHFLTLHHQRAGNGGRGRERP*RSLRSA
Trigger: GGCTGACCGCAAAGACCTCCAGGGCCGCTCTCTTCC...TCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTCACCCATGCCCGGCCTaGGGGGCTGAGCGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCHPCPA*GAERRG
Trigger: GCCTCTGCGCTCAGCCCCGCAGGCCGGGCATGGGTG...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTACACTGTCAACCGTCTaGTCCCCCAAAACACGCACA +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGTLSTV*SPKTRT
Trigger: TGTGCGTGTTTTGGGGGAGCAGACGGTTGACAGTGT...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR GCA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCTCACTTTGCGGAGGCTaGTCCTTTTGTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASSIRREEPGSEMHPPAASLCGG*SFCGWS
Trigger: GCTCCACCCACAAAAGGAGCAGCCTCCGCAAAGTGA...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp GGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAACGGAGGGAGACACAGACCACACCCCTaGCTCCCCGTGGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: GRIHFLTLHHQRAGNGGRHRPHP*LPVDFV
Trigger: GACAAAGTCCACGGGGAGGCAGGGGTGTGGTCTGTG...TCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGGGTGCACAGGTCTTTaGAGCGTGCCTGCACGAGGC +
Preference number: 4 (lower is better)
Translates to: TFASSIRREEPGSEMHPPGCTGL*SVPARG
Trigger: GCCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCC...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp CCTGCTCTGAGGCAGTCGGGGTCAGGGGCTACATCTTCATGCGGAATTCCTGACTCACCATCAGCGAGCTaGGAACGGAGGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PALRQSGSGATSSCGIPDSPSAS*ERREKR
Trigger: CCTCTTCTCCCTCCGTTCCCAGCTCGCTGATGGTGA...GTCAGGAATTCCGCATGAAGATGTAGCCCCTGACCCCGACTGCCTCAGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAAGAGGAACCGGGATCTaGGATGCATCCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQARGTGI*DASTSC
Trigger: GCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCT...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR TCA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGGCCCGTGCATTCGGTaGACACCTCCAAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQAGPCIR*TPPKSS
Trigger: AGAGCTCTTTGGAGGTGTTCACCGAATGCACGGGCC...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCCTTGTAGGAGTTTCCTaGGGCTGCCGTAACAATCGC +
Preference number: 4 (lower is better)
Translates to: ASSIRREEPGSEMHPPAALVGVS*GCRNNR
Trigger: GCGATTGTTACGGCAGCCTCAGGAAACTCCTACAAG...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp AGGAATCCTTTCTCAACAGGCGACAACAGTTCAAGGATTCAGCCTTGTTGCCAGCGGTCAGCCCTGCTCTaGGGCAGTCGGGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RNPFSTGDNSSRIQPCCQRSALL*GSRGQG
Trigger: CCCCTGACCCCGACTGCCTCAGAGCAGGGCTGACCG...CTGGCAACAAGGCTGAATCCTTGAACTGTTGTCGCCTGTTGAGAAAGGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTAGACAGGCACATGCCTaGGTGCCAGCTTTTAACTCT +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGRQAHA*VPAFNS
Trigger: AGAGTTAAAAGCTGGCACCCAGGCATGTGCCTGTCT...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCAGCTTCTGGGGACTTCTaGTGGTGTTTCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAAASGDF*WCFPGG
Trigger: CCCTCCAGGGAAACACCACCAGAAGTCCCCAGAAGC...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCACTCCTCTCTCCTGTCTaGGCCTCGGTTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQALLSPV*ASVPPS
Trigger: AGATGGTGGAACCGAGGCCCAGACAGGAGAGAGGAG...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCAAAACGTTCAACAGTGTaGCCAGGGAAGAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAAKRSTV*PGKRAA
Trigger: GGCCGCTCTCTTCCCTGGTCACACTGTTGAACGTTT...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCCACCCATGCCCGGCCTaGGGGGCTGAGCGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFHPCPA*GAERRG
Trigger: GCCTCTGCGCTCAGCCCCGCAGGCCGGGCATGGGTG...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp AGTCCCTCATTTGCGACCCCCAGCCACAGAGAAACGTTCAACAGTGTGACCAGGCAGTGTCCTTGTGTTTaGAGCTGGGAGGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPSFATPSHRETFNSVTRQCPCV*SWEVGP
Trigger: AGGGCCGACCTCCCAGCTGCAAACACAAGGACACTG...CCTGGTCACACTGTTGAACGTTTCTCTGTGGCTGGGGGTCGCAAATGAGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp TGGTTTAATGTTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGTCCCCGTGGCTGCCGTaGCCAGGTGGCCAGACACCC +
Preference number: 4 (lower is better)
Translates to: WFNVAMGGSISLPFTISESPWLP*PGGQTP
Trigger: GGGTGTCTGGCCACCTGGGCACGGCAGCCACGGGGA...CTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGCGTACACGTTGTTaGGTGCTTTATTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ASSIRREEPGSEMHPPAAGRTRC*VLYSCS
Trigger: GCTACAGGAATAAAGCACCCAACAACGTGTACGCCC...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR TCA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGAAACAGCTCTTCCTTaGCATGTCGAAACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ASSIRREEPGSEMHPPAAETALP*HVETVL
Trigger: CAGCACAGTTTCGACATGTCAAGGAAGAGCTGTTTC...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR TCA 90 bp GATTTCTCAGACAGGCACATGCCTGGGTGCCAGCTTTTAACTCTCCGCTCTCTCCTGGTCTTGAACTCCTaGCCTCTGATCCGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DFSDRHMPGCQLLTLRSLLVLNS*PLIRLP
Trigger: AGGCAGCCGGATCAGAGGTCAGGAGTTCAAGACCAG...GAGAGAGCGGAGAGTTAAAAGCTGGCACCCAGGCATGTGCCTGTCTGAGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTCAGGATCACACCCTGTaGGCCCCGGGAGTAGGAGCG +
Preference number: 4 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCQDHTL*APGVGA
Trigger: CGCTCCTACTCCCGGGGCGCACAGGGTGTGATCCTG...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGGAATCCTTTCTCAACAGGCGACAACAGTTCAAGGATTCAGCCTTGTTGCCAGGCAAGCTCAGCACCTTaGTCGGCCGCCAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RNPFSTGDNSSRIQPCCQASSAP*SAARAG
Trigger: ACCGGCTCTGGCGGCCGAGCAAGGTGCTGAGCTTGC...CTGGCAACAAGGCTGAATCCTTGAACTGTTGTCGCCTGTTGAGAAAGGATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCATCACTTTGCGGAGGCTaGTCCTTTTGTGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TFASSIRREEPGSEMHPPSLCGG*SFCGWS
Trigger: GCTCCACCCACAAAAGGAGCAGCCTCCGCAAAGTGA...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAAGGCACATGCCTGGGTaGCAGCTTTTAACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: TFASSIRREEPGSEMHPPRHMPG*QLLTLR
Trigger: GCGGAGAGTTAAAAGCTGGCACCCAGGCATGTGCCT...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTTGGGTTTCTTCAACGTaGACTCTCCTTTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGWVSST*TLLSVH
Trigger: ATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCA...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAAGAGGCCCCTCAACGTaGGTTTCTTCAACGTGGACT +
Preference number: 4 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQARGPST*VSSTWT
Trigger: AGTCCACGTTGAAGAAACCCACGTTGAGGGGCCTCT...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp TCTGATTTCTCAGACAGGCACATGCCTGGGTGCCAGCTTTTAACTCTCCGCTCTCAGGCTGGGGTGCAGTaGTACGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SDFSDRHMPGCQLLTLRSQAGVQ*YDLGSL
Trigger: CAGTGAGCCGAGATCGTACCACTGCACCCCAGCCTG...AGAGCGGAGAGTTAAAAGCTGGCACCCAGGCATGTGCCTGTCTGAGAAATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp TGGTTTAATGTTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGGCTGCCGTGCCCAGGTaGCCAGACACCCCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: WFNVAMGGSISLPFTISEAAVPR*PDTPKP
Trigger: AGGCTTGGGGGTGTCTGGCCACCTGGGCACGGCAGC...CTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CAA 72 bp CAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTaGTGTTTGCAGCTGGGAGGTCGGCCCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QRGLSFLCISVS*CLQLGGRPCRS
Trigger: AGAACGACAGGGCCGACCTCCCAGCTGCAAACACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp GGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAACGGAGGGAGAACCTCCAAAGAGCTCTaGGTCACAAAGCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GRIHFLTLHHQRAGNGGRTSKEL*VTKPWE
Trigger: TTCCCAAGGCTTTGTGACTCAGAGCTCTTTGGAGGT...TCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTAGCCGGTCCATCCCATaGCGCAGCAGCACGATCCTG +
Preference number: 4 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCSRSIP*RSSTIL
Trigger: CAGGATCGTGCTGCTGCGGCATGGGATGGACCGGCT...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp CCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTAACGCCGAGCTTCTCCTGTTATCCCGCTGCCATTaGTTCTCAAATTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: PGSEMHPPAAGGNAELLLLSRCH*FSNSIE
Trigger: TTCAATGGAATTTGAGAAGCAATGGCAGCGGGATAA...CAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp CCTGCTCTGAGGCAGTCGGGGTCAGGGGCTACATCTTCATGCGGAATTCCTGACTGCTGTAGCACTTTCTaGCGTGAGCGTAACTCACTT +
Preference number: 4 (lower is better)
Translates to: PALRQSGSGATSSCGIPDCCSTF*RERNSL
Trigger: AAGTGAGTTACGCTCACGGCAGAAAGTGCTACAGCA...GTCAGGAATTCCGCATGAAGATGTAGCCCCTGACCCCGACTGCCTCAGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCGAACTATCCGCCGGGTaGCCGTACGGGGACTCGGCC +
Preference number: 4 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFELSAG*PYGDSA
Trigger: GGCCGAGTCCCCGTACGGCCACCCGGCGGATAGTTC...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR CCA 90 bp GATTTCTCAGACAGGCACATGCCTGGGTGCCAGCTTTTAACTCTCCGCTCTCTCGTCTACACCAGGCAGTaGCGCAGTGAAGTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: DFSDRHMPGCQLLTLRSLVYTRQ*RSEVKG
Trigger: GCCCTTTACTTCACTGCGCCACTGCCTGGTGTAGAC...GAGAGAGCGGAGAGTTAAAAGCTGGCACCCAGGCATGTGCCTGTCTGAGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCACCAAAACCAATAACTTaGCAGGGCTGTGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQAPKPIT*QGCAPS
Trigger: AGAGGGAGCACAGCCCTGCCAAGTTATTGGTTTTGG...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp TGGTTTAATGTTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGTGGACTTTGTCCCCGTaGCTGCCGTGCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: WFNVAMGGSISLPFTISEWTLSP*LPCPGG
Trigger: GCCACCTGGGCACGGCAGCCACGGGGACAAAGTCCA...CTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCGGGTTCATCCCTCACTaGGCCCAGACCCCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFGFIPH*AQTPRA
Trigger: TGCCCTCGGGGTCTGGGCTCAGTGAGGGATGAACCC...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR TCA 90 bp GGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGCTGGGAACGGAGGGAGAGAAACAGCTCTTCCTTaGCATGTCGAAACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRIHFLTLHHQRAGNGGRETALP*HVETVL
Trigger: CAGCACAGTTTCGACATGTCAAGGAAGAGCTGTTTC...TCTCCCTCCGTTCCCAGCTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTTTATCCCGCTGCCATTaGTTCTCAAATTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGLSRCH*FSNSIE
Trigger: TTCAATGGAATTTGAGAAGCAATGGCAGCGGGATAA...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR GCA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCAGGACTCTCCTTTCTGTaGATCTCAGTGTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAAGLSFL*ISVSLC
Trigger: ACACAAGGACACTGAGATGCACAGAAAGGAGAGTCC...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAATTAGCTCCGATATGTaGTGTCTACACCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TFASSIRREEPGSEMHPPISSDM*CLHQAV
Trigger: CACTGCCTGGTGTAGACATCACATATCGGAGCTAAT...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp CCTCTGCACTTCTGTTCCGGAAAAGGAATCCTTTCTCAACAGGCGACAACAGTTTTCATGCGGAATTCCTaGCAGCCCCTCGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLHFCSGKGILSQQATTVFMRNS*QPLGAP
Trigger: AGGAGCTCCGAGGGGCTGTCAGGAATTCCGCATGAA...AACTGTTGTCGCCTGTTGAGAAAGGATTCCTTTTCCGGAACAGAAGTGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp TGGTTTAATGTTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGAACCGGGATCTGAGATaGATCCACCAGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: WFNVAMGGSISLPFTISENRDLR*IHQLPG
Trigger: CCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTT...CTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCCTTTGCGGTCAGCCCTaGTCTGAGGCAGTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFLCGQP*SEAVGV
Trigger: GACCCCGACTGCCTCAGAGCAGGGCTGACCGCAAAG...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTTCAGGGTTCACCTTCTaGCCACAGACCACACCCCTG +
Preference number: 4 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCSGFTF*PQTTPL
Trigger: CAGGGGTGTGGTCTGTGGGCAGAAGGTGAACCCTGA...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCAATACAGGTTTGGCCTaGTTTAATGTTGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: ASSIRREEPGSEMHPPAANTGLA*FNVAMG
Trigger: TCCCATTGCAACATTAAACCAGGCCAAACCTGTATT...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AGGAATCCTTTCTCAACAGGCGACAACAGTTCAAGGATTCAGCCTTGTTGCCAGTCTGGGGACTTCTGGTaGTGTTTCCCTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RNPFSTGDNSSRIQPCCQSGDFW*CFPGGP
Trigger: TGGCCCTCCAGGGAAACACCACCAGAAGTCCCCAGA...CTGGCAACAAGGCTGAATCCTTGAACTGTTGTCGCCTGTTGAGAAAGGATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGTACACGTTGTTGGGTaGTTTATTCCTGTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TFASSIRREEPGSEMHPPVHVVG*FIPVAL
Trigger: CAGAGCTACAGGAATAAAGCACCCAACAACGTGTAC...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR CCA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTATTTCATACACAAACTaGACAGATCAGTTGCACATA +
Preference number: 4 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGISYTN*TDQLHI
Trigger: TATGTGCAACTGATCTGTCCAGTTTGTGTATGAAAT...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR TCA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCACACTTCATTCTTTACTaGAACAGCTCTTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAAHFILY*NSSSLT
Trigger: TGTCAAGGAAGAGCTGTTTCAGTAAAGAATGAAGTG...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR CCA 90 bp CCTCTGCACTTCTGTTCCGGAAAAGGAATCCTTTCTCAACAGGCGACAACAGTTGAAATACACAAAATCTaGCCGGGCGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PLHFCSGKGILSQQATTVEIHKI*PGAVAH
Trigger: GTGAGCCACTGCGCCCGGCCAGATTTTGTGTATTTC...AACTGTTGTCGCCTGTTGAGAAAGGATTCCTTTTCCGGAACAGAAGTGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AATACAAAATTCGAAAGAACCGGTCGCCAACTCTACCAAGAGAGAAACAACTATAGACACCCCCAAGCCTaGGTCCACCCGCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: NTKFERTGRQLYQERNNYRHPQA*VHPQGP
Trigger: TGGTCCCTGCGGGTGGACCCAGGCTTGGGGGTGTCT...ATAGTTGTTTCTCTCTTGGTAGAGTTGGCGACCGGTTCTTTCGAATTTTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AAATTCGAAAGAACCGGTCGCCAACTCTACCAAGAGAGAAACAACTATACATTTTCGTCTTGTAGTCGATaGCCGCCGGGTGGCCGTACG +
Preference number: 4 (lower is better)
Translates to: KFERTGRQLYQERNNYTFSSCSR*PPGGRT
Trigger: CGTACGGCCACCCGGCGGGCATCGACTACAAGACGA...AAATGTATAGTTGTTTCTCTCTTGGTAGAGTTGGCGACCGGTTCTTTCGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCCTCGGCCTCCTGAAGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFLGLLK*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTTCAGGAGGCCGAG...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AAATTCGAAAGAACCGGTCGCCAACTCTACCAAGAGAGAAACAACTATACATTTCAGGTCTTTGCAGCGTaGCTGCACGAGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KFERTGRQLYQERNNYTFQVFAA*LHEAGH
Trigger: GTGGCCAGCCTCGTGCAGGCACGCTGCAAAGACCTG...AAATGTATAGTTGTTTCTCTCTTGGTAGAGTTGGCGACCGGTTCTTTCGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR GCA 90 bp AACGTGGGTTTCTTCAACGTGGACTCTCCTTTCTGTGCATCTCAGTGTCCTTGTTGTTCTGCCTTGGTTTaGTGTAGCACTTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NVGFFNVDSPFCASQCPCCSALV*CSTFCR
Trigger: ACGGCAGAAAGTGCTACAGCAAACCAAGGCAGAACA...ACAAGGACACTGAGATGCACAGAAAGGAGAGTCCACGTTGAAGAAACCCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCAGCGCCATATTCGTCTaGGCGTACACGTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFSAIFV*AYTLLG
Trigger: ACCCAACAACGTGTACGCCCAGACGAATATGGCGCT...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR CCA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCAAGAAAAATACAGGTTTaGCCTGGTTTAATGTTGCAA +
Preference number: 4 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAARKIQV*PGLMLQ
Trigger: TTGCAACATTAAACCAGGCCAAACCTGTATTTTTCT...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AGTCCCTCATTTGCGACCCCCAGCCACAGAGAAACGTTCAACAGTGTGACCAGGATTTCATACACAAACTaGACAGATCAGTTGCACATA +
Preference number: 4 (lower is better)
Translates to: SPSFATPSHRETFNSVTRISYTN*TDQLHI
Trigger: TATGTGCAACTGATCTGTCCAGTTTGTGTATGAAAT...CCTGGTCACACTGTTGAACGTTTCTCTGTGGCTGGGGGTCGCAAATGAGGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CAA 72 bp CGGTCTGTATTAGGTTTCGTCTGTTTTTGTTCTGCCTaGGTTTGCTGTAGCACTTTCTGCCGTGAGCGTAAC +
Preference number: 4 (lower is better)
Translates to: RSVLGFVCFCSA*VCCSTFCRERN
Trigger: GTTACGCTCACGGCAGAAAGTGCTACAGCAAACCAAGGCAGAACAAAAACAGACGAAACCTAATACAGACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CCA 90 bp AGGAATCCTTTCTCAACAGGCGACAACAGTTCAAGGATTCAGCCTTGTTGCCAGGGTTTAATGTTGCAATaGGAGGATCCATTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: RNPFSTGDNSSRIQPCCQGLMLQ*EDPFPY
Trigger: GTAAGGAAATGGATCCTCCCATTGCAACATTAAACC...CTGGCAACAAGGCTGAATCCTTGAACTGTTGTCGCCTGTTGAGAAAGGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
3UTR CAA 72 bp AGGAAGAGAAAAATACAGGTTTGGCCTGGTTTAATGTaGCAATGGGAGGATCCATTTCCTTACCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RKRKIQVWPGLM*QWEDPFPYPSP
Trigger: TGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCAGGCCAAACCTGTATTTTTCTCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR TCA 90 bp AAAGACCCCTCTCGTAATATCAGTGACTCTAAATTATCCCGCTGCCATTGCTTCCACTTCATTCTTTACTaGAACAGCTCTTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: KDPSRNISDSKLSRCHCFHFILY*NSSSLT
Trigger: TGTCAAGGAAGAGCTGTTTCAGTAAAGAATGAAGTG...GAAGCAATGGCAGCGGGATAATTTAGAGTCACTGATATTACGAGAGGGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS-3UTR CCA 90 bp AAATTCGAAAGAACCGGTCGCCAACTCTACCAAGAGAGAAACAACTATACATTTGTTTTTGTTCTGCCTTaGTTTGCTGTAGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: KFERTGRQLYQERNNYTFVFVLP*FAVALS
Trigger: AGAAAGTGCTACAGCAAACCAAGGCAGAACAAAAAC...AAATGTATAGTTGTTTCTCTCTTGGTAGAGTTGGCGACCGGTTCTTTCGAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS CCA 90 bp GGTGCCCACACCTGTTCTCCCGCCCTCCCAAGGCTCGGACGCCCGTaGCCCTGGCTTGTACATGCAGCAAGCCCTGCCGCGACGTCCCCT +
Preference number: 5 (lower is better)
Translates to: GAHTCSPALPRLGRP*PWLVHAASPAATSP
Trigger: AGGGGACGTCGCGGCAGGGCTTGCTGCATGTACAAGCCAGGGCCACGGGCGTCCGAGCCTTGGGAGGGCGGGAGAACAGGTGTGGGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 90 bp GTGTCGACCACGCCATGTCACCATTGCCAGGCGGGCTGGTCTGCGTaGCAGCAGGCACAAGCGCCGGTCACTGCTGGTCAGCCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: VSTTPCHHCQAGWSA*QQAQAPVTAGQPSP
Trigger: CGGGCTGGGCTGACCAGCAGTGACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 90 bp AAGGCTCGGACGCCCGTGGCCCTGGCTTGTACATGCAGCAAGCCCTaGCGCGACGTCCCCTCTGCCCACGTACAGATCCCAGGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: KARTPVALACTCSKP*RDVPSAHVQIPGAP
Trigger: GGGAGCTCCTGGGATCTGTACGTGGGCAGAGGGGACGTCGCGGCAGGGCTTGCTGCATGTACAAGCCAGGGCCACGGGCGTCCGAGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 90 bp CTCCTTCCTGCTGGAGCGCCATCCGGTGCCCTGGCCTGTGATCCATaGGTACCCATGAGCCCTGGAGGGCCCGGCCCTAATTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: LLPAGAPSGALACDP*VPMSPGGPGPNSWP
Trigger: AGGCCAGGAATTAGGGCCGGGCCCTCCAGGGCTCATGGGTACCCATGGATCACAGGCCAGGGCACCGGATGGCGCTCCAGCAGGAAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 90 bp CTTAGTGTCGACCACGCCATGTCACCATTGCCAGGCGGGCTGGTCTaGGTGCCAGCAGGCACAAGCGCCGGTCACTGCTGGTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LSVDHAMSPLPGGLV*VPAGTSAGHCWSAQ
Trigger: CTGGGCTGACCAGCAGTGACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACACTAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 90 bp GTGGGCTTAGTGTCGACCACGCCATGTCACCATTGCCAGGCGGGCTaGTCTGCGTGCCAGCAGGCACAAGCGCCGGTCACTGCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: VGLVSTTPCHHCQAG*SACQQAQAPVTAGQ
Trigger: CTGACCAGCAGTGACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACACTAAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS-3UTR CAA 90 bp CCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTAACGCCGAGCTTCTCCTGGCTGGCCCTCGGACTTaGCCACAGCGACATCCGAAC +
Preference number: 5 (lower is better)
Translates to: PGSEMHPPAAGGNAELLLAGPRT*PQRHPN
Trigger: GTTCGGATGTCGCTGTGGCAAAGTCCGAGGGCCAGC...CAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS GCA 90 bp GACACTCATACAGTGGGCTTAGTGTCGACCACGCCATGTCACCATTaGCAGGCGGGCTGGTCTGCGTGCCAGCAGGCACAAGCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: DTHTVGLVSTTPCHH*QAGWSACQQAQAPV
Trigger: GACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACACTAAGCCCACTGTATGAGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 90 bp GATCCATGGGTACCCATGAGCCCTGGAGGGCCCGGCCCTAATTCCTaGCCTGACGTCCTCCCAAGCCTACAGGGATCTTGGGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: DPWVPMSPGGPGPNS*PDVLPSLQGSWAVA
Trigger: TGCCACTGCCCAAGATCCCTGTAGGCTTGGGAGGACGTCAGGCCAGGAATTAGGGCCGGGCCCTCCAGGGCTCATGGGTACCCATGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 90 bp GGCCCTGGCTTGTACATGCAGCAAGCCCTGCCGCGACGTCCCCTCTaGCCACGTACAGATCCCAGGAGCTCCCTCATGAGCTTTCTGACA +
Preference number: 5 (lower is better)
Translates to: GPGLYMQQALPRRPL*PRTDPRSSLMSFLT
Trigger: TGTCAGAAAGCTCATGAGGGAGCTCCTGGGATCTGTACGTGGGCAGAGGGGACGTCGCGGCAGGGCTTGCTGCATGTACAAGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS TCA 90 bp GTGATTGTAGCTATCACCAAAGCCCTATCCAGTGTTGTGCCGAGGTaGGGCACCCTCCTTCCTGCTGGAGCGCCATCCGGTGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VIVAITKALSSVVPR*GTLLPAGAPSGALA
Trigger: GGCCAGGGCACCGGATGGCGCTCCAGCAGGAAGGAGGGTGCCTCACCTCGGCACAACACTGGATAGGGCTTTGGTGATAGCTACAATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS-3UTR CAA 90 bp GAGGTCGGCCCTGTCGTTCTCACCCCACCTGTGGCACAGCAGAGAGAAGGGTGCTCCAAAACCAATAACTaGGCAGGGCTGTGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: EVGPVVLTPPVAQQREGCSKTNN*AGLCSL
Trigger: GAGGGAGCACAGCCCTGCCAAGTTATTGGTTTTGGA...GCACCCTTCTCTCTGCTGTGCCACAGGTGGGGTGAGAACGACAGGGCCGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp TCTGATTTCTCAGACAGGCACATGCCTGGGTGCCAGCTTTTAACTCTCCGCTCTGCCTCCCCGTGGACTTaGTCCCCGTGGCTGCCGTGC +
Preference number: 5 (lower is better)
Translates to: SDFSDRHMPGCQLLTLRSASPWT*SPWLPC
Trigger: GCACGGCAGCCACGGGGACAAAGTCCACGGGGAGGC...AGAGCGGAGAGTTAAAAGCTGGCACCCAGGCATGTGCCTGTCTGAGAAATCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCAAGGGTGCACAGGTCTTaGCAGCGTGCCTGCACGAGG +
Preference number: 5 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAARVHRS*QRACTR
Trigger: CCTCGTGCAGGCACGCTGCAAAGACCTGTGCACCCT...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS CCA 90 bp AGAGCTGGGAGAGGCGGCTGTAGGGAAGTGGCCCTGCCGACACCTTaGTTTTGGGCTCTGGCCTCCAGAACCGTGAGAGAATGCATTTCT +
Preference number: 5 (lower is better)
Translates to: RAGRGGCREVALPTP*FWALASRTVRECIS
Trigger: AGAAATGCATTCTCTCACGGTTCTGGAGGCCAGAGCCCAAAACCAAGGTGTCGGCAGGGCCACTTCCCTACAGCCGCCTCTCCCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS-3UTR CAA 90 bp AGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTGTCTGGGCGTACACGTaGTTGGGTGCTTTATTCCTG +
Preference number: 5 (lower is better)
Translates to: SIRREEPGSEMHPPAAGGVWAYT*LGALFL
Trigger: CAGGAATAAAGCACCCAACAACGTGTACGCCCAGAC...ACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269347.10
CDS-3UTR CAA 90 bp CGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGCAGCCCAGATCGTGCCATaGTACTCCACCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: RGSVFPSHGRRRTHSQAAAQIVP*YSTLGN
Trigger: GTTGCCCAGGGTGGAGTACAATGGCACGATCTGGGC...TGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS TCA 90 bp GTTGGGTGCTTTATTCCTGTAGCTCTGGTAGGGTTCATCCCTCACTaGGCCCAGACCCCGAGGGCACAGTGCAGACAAAGCCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VGCFIPVALVGFIPH*AQTPRAQCRQSPVL
Trigger: GAGGACAGGGCTTTGTCTGCACTGTGCCCTCGGGGTCTGGGCTCAGTGAGGGATGAACCCTACCAGAGCTACAGGAATAAAGCACCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571554.5
CDS CCA 90 bp GGGAGAGGCGGCTGTAGGGAAGTGGCCCTGCCGACACCTTGGTTTTaGGCTCTGGCCTCCAGAACCGTGAGAGAATGCATTTCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: GRGGCREVALPTPWF*ALASRTVRECISVV
Trigger: AACAACAGAAATGCATTCTCTCACGGTTCTGGAGGCCAGAGCCCAAAACCAAGGTGTCGGCAGGGCCACTTCCCTACAGCCGCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS-3UTR CAA 90 bp ACATTCGCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCATCAGTGTCCTTGTGTTaGCAGCTGGGAGGTCGGCCC +
Preference number: 5 (lower is better)
Translates to: TFASSIRREEPGSEMHPPSVSLC*QLGGRP
Trigger: GGGCCGACCTCCCAGCTGCAAACACAAGGACACTGA...TGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp GCAAGCAGCATTCGCCGAGAGGAACCGGGATCTGAGATGCATCCACCAGCTGCCTGCATCTCAGTGTCCTaGTGTTTGCAGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ASSIRREEPGSEMHPPAACISVS*CLQLGG
Trigger: ACCTCCCAGCTGCAAACACAAGGACACTGAGATGCA...GGCAGCTGGTGGATGCATCTCAGATCCCGGTTCCTCTCGGCGAATGCTGCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp CCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTAACGCCGAGCTTCTCCTGAGGTTTCGTCTGTTTTaGTTCTGCCTTGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGSEMHPPAAGGNAELLLRFRLF*FCLGLL
Trigger: CAGCAAACCAAGGCAGAACAAAAACAGACGAAACCT...CAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS GCA 90 bp CACACCCTGGGGGAGAGGTCACAGGCTCAGCACGCAGAACACAGATaGAGGCACAGCTGTGGCCATGCACGCAAAGACATACAACTAAAT +
Preference number: 5 (lower is better)
Translates to: HTLGERSQAQHAEHR*RHSCGHARKDIQLN
Trigger: ATTTAGTTGTATGTCTTTGCGTGCATGGCCACAGCTGTGCCTGCATCTGTGTTCTGCGTGCTGAGCCTGTGACCTCTCCCCCAGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574132.5
CDS-3UTR CAA 90 bp CCGGGATCTGAGATGCATCCACCAGCTGCCGGGGGTAACGCCGAGCTTCTCCTGAACTGGACAGATCAGTaGCACATAACCTCTACATCT +
Preference number: 5 (lower is better)
Translates to: PGSEMHPPAAGGNAELLLNWTDQ*HITSTS
Trigger: AGATGTAGAGGTTATGTGCAACTGATCTGTCCAGTT...CAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCAGATCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS TCA 90 bp AGCCGAGGTACGCCGTGGACGCTCGTTTCGTCTGGACCAGCTTCCTaGGCTTTCGTGATTGTAGCTATCACCAAAGCCCTATCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: SRGTPWTLVSSGPAS*AFVIVAITKALSSV
Trigger: AACACTGGATAGGGCTTTGGTGATAGCTACAATCACGAAAGCTCAGGAAGCTGGTCCAGACGAAACGAGCGTCCACGGCGTACCTCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 90 bp AGGGTTAGAGACGGCTTAGGCCTGAGGCTGCAGCTAACAGGACGCTaGAAGTCTCACGTTCAGGGAAGAAAAGGGTTTCTCATCAGTGCA +
Preference number: 5 (lower is better)
Translates to: RVRDGLGLRLQLTGR*KSHVQGRKGFLISA
Trigger: TGCACTGATGAGAAACCCTTTTCTTCCCTGAACGTGAGACTTCCAGCGTCCTGTTAGCTGCAGCCTCAGGCCTAAGCCGTCTCTAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570676.1
CDS CCA 90 bp CGCACAGCTCTTAAAGCGCCATATTCGTCTGGGCGTACACGTTGTTaGGTGCTTTATTCCTGTAGCTCTGGTAGGGTTCATCCCTCACTG +
Preference number: 5 (lower is better)
Translates to: RTALKAPYSSGRTRC*VLYSCSSGRVHPSL
Trigger: CAGTGAGGGATGAACCCTACCAGAGCTACAGGAATAAAGCACCCAACAACGTGTACGCCCAGACGAATATGGCGCTTTAAGAGCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571554.5
CDS-3UTR CAA 90 bp AGGAATCCTTTCTCAACAGGCGACAACAGTTCAAGGATTCAGCCTTGTTGCCAGGGTTTAGTCCCTCATTaGCGACCCCCAGCCACAGAG +
Preference number: 5 (lower is better)
Translates to: RNPFSTGDNSSRIQPCCQGLVPH*RPPATE
Trigger: CTCTGTGGCTGGGGGTCGCAAATGAGGGACTAAACC...CTGGCAACAAGGCTGAATCCTTGAACTGTTGTCGCCTGTTGAGAAAGGATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAAACTGGACAGATCAGTaGCACATAACCTCTACATCT +
Preference number: 5 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQANWTDQ*HITSTS
Trigger: AGATGTAGAGGTTATGTGCAACTGATCTGTCCAGTT...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571995.6
CDS GCA 90 bp ATGTCCCTGAAGGGATCCGGGTGTTGGGATGTCCTCCCAGGCTCATaGTCTTCTCTGTCATTTAAAAAGTCAAACAGAGCTGCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: MSLKGSGCWDVLPGS*SSLSFKKSNRAAAS
Trigger: TGAAGCTGCAGCTCTGTTTGACTTTTTAAATGACAGAGAAGAGCATGAGCCTGGGAGGACATCCCAACACCCGGATCCCTTCAGGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572603.1
CDS-3UTR CAA 90 bp CGACGGGGTAGTGTGTTTCCATCACACGGAAGGCGTCGCACACATTCGCAAGCAGAGAAAAATACAGGTTaGGCCTGGTTTAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: RRGSVFPSHGRRRTHSQAEKNTG*AWFNVA
Trigger: TGCAACATTAAACCAGGCCAAACCTGTATTTTTCTC...TGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp AGTCCCTCATTTGCGACCCCCAGCCACAGAGAAACGTTCAACAGTGTGACCAGGTGTTTTTGTTCTGCCTaGGTTTGCTGTAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SPSFATPSHRETFNSVTRCFCSA*VCCSTF
Trigger: GAAAGTGCTACAGCAAACCAAGGCAGAACAAAAACA...CCTGGTCACACTGTTGAACGTTTCTCTGTGGCTGGGGGTCGCAAATGAGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS GCA 90 bp TCTTGTAGTCGATGCCTTCAATCAAACTCAACACTGTCAACCGTCTaGTCCCCCAAAACACGCACAGCTCTTAAAGCGCCATATTCGTCT +
Preference number: 5 (lower is better)
Translates to: SCSRCLQSNSTLSTV*SPKTRTALKAPYSS
Trigger: AGACGAATATGGCGCTTTAAGAGCTGTGCGTGTTTTGGGGGAGCAGACGGTTGACAGTGTTGAGTTTGATTGAAGGCATCGACTACAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571554.5
CDS-3UTR CAA 90 bp AGGAAGAGAAAAATACAGGTTTGGCCTGGTTTAATGTTGCAATGGGAGGATCCACGGGGTTTCATCACGTaGGCCAGACTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RKRKIQVWPGLMLQWEDPRGFIT*ARLVLN
Trigger: GTTCAAGACCAGTCTGGCCAACGTGATGAAACCCCG...TGGATCCTCCCATTGCAACATTAAACCAGGCCAAACCTGTATTTTTCTCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp TGGTTTAATGTTGCAATGGGAGGATCCATTTCCTTACCCTTCACCATCAGCGAGAAGGATTCAGCCTTGTaGCCAGTGTCGTGTATTAGC +
Preference number: 5 (lower is better)
Translates to: WFNVAMGGSISLPFTISEKDSAL*PVSCIS
Trigger: GCTAATACACGACACTGGCAACAAGGCTGAATCCTT...CTCGCTGATGGTGAAGGGTAAGGAAATGGATCCTCCCATTGCAACATTAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp AGGAAGAGAAAAATACAGGTTTGGCCTGGTTTAATGTTGCAATGGGAGGATCCATTCAAGGATTCAGCCTaGTTGCCAGTGTCGTGTATT +
Preference number: 5 (lower is better)
Translates to: RKRKIQVWPGLMLQWEDPFKDSA*LPVSCI
Trigger: AATACACGACACTGGCAACAAGGCTGAATCCTTGAA...TGGATCCTCCCATTGCAACATTAAACCAGGCCAAACCTGTATTTTTCTCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS-3UTR CAA 90 bp AATACAAAATTCGAAAGAACCGGTCGCCAACTCTACCAAGAGAGAAACAACTATTGGCCTGGTTTAATGTaGCAATGGGAGGATCCATTT +
Preference number: 5 (lower is better)
Translates to: NTKFERTGRQLYQERNNYWPGLM*QWEDPF
Trigger: AAATGGATCCTCCCATTGCAACATTAAACCAGGCCA...ATAGTTGTTTCTCTCTTGGTAGAGTTGGCGACCGGTTCTTTCGAATTTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571995.6
CDS CAA 90 bp TGCCTGCGCCCTCCCGCACCCGGGCCCCTCCTGTCCTCAGCCGCCTaGGCCTCTGTGGGGGTCAGGCTCGCATCACCCTGGCCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CLRPPAPGPLLSSAA*ASVGVRLASPWPRG
Trigger: CCCCCTGGGCCAGGGTGATGCGAGCCTGACCCCCACAGAGGCCAAGGCGGCTGAGGACAGGAGGGGCCCGGGTGCGGGAGGGCGCAGGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570676.1
CDS CCA 72 bp CTCCCGCACCCGGGCCCCTCCTGTCCTCAGCCGCCTTaGCCTCTGTGGGGGTCAGGCTCGCATCACCCTGGC +
Preference number: 6 (lower is better)
Translates to: LPHPGPSCPQPP*PLWGSGSHHPG
Trigger: GCCAGGGTGATGCGAGCCTGACCCCCACAGAGGCCAAGGCGGCTGAGGACAGGAGGGGCCCGGGTGCGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570676.1
CDS CAA 72 bp CCTCCCGCACCCGGGCCCCTCCTGTCCTCAGCCGCCTaGGCCTCTGTGGGGGTCAGGCTCGCATCACCCTGG +
Preference number: 6 (lower is better)
Translates to: PPAPGPLLSSAA*ASVGVRLASPW
Trigger: CCAGGGTGATGCGAGCCTGACCCCCACAGAGGCCAAGGCGGCTGAGGACAGGAGGGGCCCGGGTGCGGGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570676.1
CDS GCA 72 bp AGAGGTGGCCCCCGGAATAGCCCCTGGGCCTACCCTTaGTCGGCCGCCAGAGCCGGTCCATCCCATGCCGCA +
Preference number: 6 (lower is better)
Translates to: RGGPRNSPWAYP*SAARAGPSHAA
Trigger: TGCGGCATGGGATGGACCGGCTCTGGCGGCCGAGCAAGGGTAGGCCCAGGGGCTATTCCGGGGGCCACCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS TCA 72 bp CCTTCCTGCTGGAGCGCCATCCGGTGCCCTGGCCTGTaGTCCATGGGTACCCATGAGCCCTGGAGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: PSCWSAIRCPGL*SMGTHEPWRAR
Trigger: CCGGGCCCTCCAGGGCTCATGGGTACCCATGGATCACAGGCCAGGGCACCGGATGGCGCTCCAGCAGGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 72 bp ACCTGTTCTCCCGCCCTCCCAAGGCTCGGACGCCCGTaGCCCTGGCTTGTACATGCAGCAAGCCCTGCCGCG +
Preference number: 6 (lower is better)
Translates to: TCSPALPRLGRP*PWLVHAASPAA
Trigger: CGCGGCAGGGCTTGCTGCATGTACAAGCCAGGGCCACGGGCGTCCGAGCCTTGGGAGGGCGGGAGAACAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 72 bp GACCACGCCATGTCACCATTGCCAGGCGGGCTGGTCTaGGTGCCAGCAGGCACAAGCGCCGGTCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: DHAMSPLPGGLV*VPAGTSAGHCW
Trigger: CCAGCAGTGACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 72 bp ACGCCATGTCACCATTGCCAGGCGGGCTGGTCTGCGTaGCAGCAGGCACAAGCGCCGGTCACTGCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: TPCHHCQAGWSA*QQAQAPVTAGQ
Trigger: CTGACCAGCAGTGACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 72 bp ACGCCCGTGGCCCTGGCTTGTACATGCAGCAAGCCCTaGCGCGACGTCCCCTCTGCCCACGTACAGATCCCA +
Preference number: 6 (lower is better)
Translates to: TPVALACTCSKP*RDVPSAHVQIP
Trigger: TGGGATCTGTACGTGGGCAGAGGGGACGTCGCGGCAGGGCTTGCTGCATGTACAAGCCAGGGCCACGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 72 bp GTGTCGACCACGCCATGTCACCATTGCCAGGCGGGCTaGTCTGCGTGCCAGCAGGCACAAGCGCCGGTCACT +
Preference number: 6 (lower is better)
Translates to: VSTTPCHHCQAG*SACQQAQAPVT
Trigger: AGTGACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CAA 90 bp GGACACTCATACAGTGGGCTTAGTGTCGACCACGCCATGTCACCATaGCCAGGCGGGCTGGTCTGCGTGCCAGCAGGCACAAGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: GHSYSGLSVDHAMSP*PGGLVCVPAGTSAG
Trigger: ACCGGCGCTTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACACTAAGCCCACTGTATGAGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 72 bp ACAGTGGGCTTAGTGTCGACCACGCCATGTCACCATTaGCAGGCGGGCTGGTCTGCGTGCCAGCAGGCACAA +
Preference number: 6 (lower is better)
Translates to: TVGLVSTTPCHH*QAGWSACQQAQ
Trigger: TTGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACACTAAGCCCACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 72 bp TTGTACATGCAGCAAGCCCTGCCGCGACGTCCCCTCTaGCCACGTACAGATCCCAGGAGCTCCCTCATGAGC +
Preference number: 6 (lower is better)
Translates to: LYMQQALPRRPL*PRTDPRSSLMS
Trigger: GCTCATGAGGGAGCTCCTGGGATCTGTACGTGGGCAGAGGGGACGTCGCGGCAGGGCTTGCTGCATGTACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CAA 72 bp TACAGTGGGCTTAGTGTCGACCACGCCATGTCACCATaGCCAGGCGGGCTGGTCTGCGTGCCAGCAGGCACA +
Preference number: 6 (lower is better)
Translates to: YSGLSVDHAMSP*PGGLVCVPAGT
Trigger: TGTGCCTGCTGGCACGCAGACCAGCCCGCCTGGCAATGGTGACATGGCGTGGTCGACACTAAGCCCACTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS TCA 72 bp GCTATCACCAAAGCCCTATCCAGTGTTGTGCCGAGGTaGGGCACCCTCCTTCCTGCTGGAGCGCCATCCGGT +
Preference number: 6 (lower is better)
Translates to: AITKALSSVVPR*GTLLPAGAPSG
Trigger: ACCGGATGGCGCTCCAGCAGGAAGGAGGGTGCCTCACCTCGGCACAACACTGGATAGGGCTTTGGTGATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 72 bp CCTTTCTGTGCATCTCAGTGTCCTTGTGTTTGCAGCTaGGAGGTCGGCCCTGTCGTTCTCACCCCACCGAGG +
Preference number: 6 (lower is better)
Translates to: PFCASQCPCVCS*EVGPVVLTPPR
Trigger: CCTCGGTGGGGTGAGAACGACAGGGCCGACCTCCCAGCTGCAAACACAAGGACACTGAGATGCACAGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571880.1
CDS CAA 90 bp ATTACTTCTCTCAAATGCCTTGCTCTGAGAACGGACACAGTGGCCTaGAGACGGGTCCCGGGAGGCAGACACTTATCCAGGGGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: ITSLKCLALRTDTVA*RRVPGGRHLSRGPL
Trigger: CAGCGGCCCCCTGGATAAGTGTCTGCCTCCCGGGACCCGTCTCAAGGCCACTGTGTCCGTTCTCAGAGCAAGGCATTTGAGAGAAGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS GCA 72 bp GGGGAGAGGTCACAGGCTCAGCACGCAGAACACAGATaGAGGCACAGCTGTGGCCATGCACGCAAAGACATA +
Preference number: 6 (lower is better)
Translates to: GERSQAQHAEHR*RHSCGHARKDI
Trigger: TATGTCTTTGCGTGCATGGCCACAGCTGTGCCTGCATCTGTGTTCTGCGTGCTGAGCCTGTGACCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574132.5
CDS CCA 72 bp GGCTGTAGGGAAGTGGCCCTGCCGACACCTTGGTTTTaGGCTCTGGCCTCCAGAACCGTGAGAGAATGCATT +
Preference number: 6 (lower is better)
Translates to: GCREVALPTPWF*ALASRTVRECI
Trigger: AATGCATTCTCTCACGGTTCTGGAGGCCAGAGCCCAAAACCAAGGTGTCGGCAGGGCCACTTCCCTACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CAA 72 bp CTCAAATGCCTTGCTCTGAGAACGGACACAGTGGCCTaGAGACGGGTCCCGGGAGGCAGACACTTATCCAGG +
Preference number: 6 (lower is better)
Translates to: LKCLALRTDTVA*RRVPGGRHLSR
Trigger: CCTGGATAAGTGTCTGCCTCCCGGGACCCGTCTCAAGGCCACTGTGTCCGTTCTCAGAGCAAGGCATTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS TCA 72 bp TTTATTCCTGTAGCTCTGGTAGGGTTCATCCCTCACTaGGCCCAGACCCCGAGGGCACAGTGCAGACAAAGC +
Preference number: 6 (lower is better)
Translates to: FIPVALVGFIPH*AQTPRAQCRQS
Trigger: GCTTTGTCTGCACTGTGCCCTCGGGGTCTGGGCTCAGTGAGGGATGAACCCTACCAGAGCTACAGGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571554.5
CDS TCA 72 bp CGACACCTTGGTTTTGGGCTCTGGCCTCCAGAACCGTaGGAGAATGCATTTCTGTTGTTCAGGACGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RHLGFGLWPPEP*ENAFLLFRTPR
Trigger: CCTGGGCGTCCTGAACAACAGAAATGCATTCTCTCACGGTTCTGGAGGCCAGAGCCCAAAACCAAGGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS TCA 72 bp ACGCCGTGGACGCTCGTTTCGTCTGGACCAGCTTCCTaGGCTTTCGTGATTGTAGCTATCACCAAAGCCCTA +
Preference number: 6 (lower is better)
Translates to: TPWTLVSSGPAS*AFVIVAITKAL
Trigger: TAGGGCTTTGGTGATAGCTACAATCACGAAAGCTCAGGAAGCTGGTCCAGACGAAACGAGCGTCCACGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 72 bp TCCTGGCCTGACGTCCTCCCAAGCCTACAGGGATCTTaGGCAGTGGCATTTCTACAACATACCTCATCGATC +
Preference number: 6 (lower is better)
Translates to: SWPDVLPSLQGS*AVAFLQHTSSI
Trigger: GATCGATGAGGTATGTTGTAGAAATGCCACTGCCCAAGATCCCTGTAGGCTTGGGAGGACGTCAGGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 72 bp TGCGGCCGCACTGAATTAGGGCCCTCATCTAATGACTaGTGTCCTTGGGAGAAGAGAAGACACAGACACTCG +
Preference number: 6 (lower is better)
Translates to: CGRTELGPSSND*CPWEKRRHRHS
Trigger: CGAGTGTCTGTGTCTTCTCTTCTCCCAAGGACACCAGTCATTAGATGAGGGCCCTAATTCAGTGCGGCCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576359.1
CDS CCA 72 bp CAAAACTTTCCAATGTCCCTGAAGGGATCCGGGTGTTaGGATGTCCTCCCAGGCTCATGCTCTTCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: QNFPMSLKGSGC*DVLPGSCSSLS
Trigger: TGACAGAGAAGAGCATGAGCCTGGGAGGACATCCCAACACCCGGATCCCTTCAGGGACATTGGAAAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572603.1
CDS CAA 72 bp ACAAAACTTTCCAATGTCCCTGAAGGGATCCGGGTGTaGGGATGTCCTCCCAGGCTCATGCTCTTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: TKLSNVPEGIRV*GCPPRLMLFSV
Trigger: GACAGAGAAGAGCATGAGCCTGGGAGGACATCCCAACACCCGGATCCCTTCAGGGACATTGGAAAGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572603.1
CDS GCA 72 bp AAGCGCCATATTCGTCTGGGCGTACACGTTGTTGGGTaGTTTATTCCTGTAGCTCTGGTAGGGTTCATCCCT +
Preference number: 6 (lower is better)
Translates to: KRHIRLGVHVVG*FIPVALVGFIP
Trigger: AGGGATGAACCCTACCAGAGCTACAGGAATAAAGCACCCAACAACGTGTACGCCCAGACGAATATGGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571554.5
CDS GCA 72 bp CGATGCCTTCAATCAAACTCAACACTGTCAACCGTCTaGTCCCCCAAAACACGCACAGCTCTTAAAGCGCCA +
Preference number: 6 (lower is better)
Translates to: RCLQSNSTLSTV*SPKTRTALKAP
Trigger: TGGCGCTTTAAGAGCTGTGCGTGTTTTGGGGGAGCAGACGGTTGACAGTGTTGAGTTTGATTGAAGGCATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571554.5
CDS GCA 72 bp GTCTCACGTTCAGGGAAGAAAAGGGTTTCTCATCAGTaGAACTTCCAGGTTTACAAGGCAGGCGGATGGGAC +
Preference number: 6 (lower is better)
Translates to: VSRSGKKRVSHQ*NFQVYKAGGWD
Trigger: GTCCCATCCGCCTGCCTTGTAAACCTGGAAGTTGCACTGATGAGAAACCCTTTTCTTCCCTGAACGTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570676.1
CDS CCA 72 bp CTTAAAGCGCCATATTCGTCTGGGCGTACACGTTGTTaGGTGCTTTATTCCTGTAGCTCTGGTAGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: LKAPYSSGRTRC*VLYSCSSGRVH
Trigger: ATGAACCCTACCAGAGCTACAGGAATAAAGCACCCAACAACGTGTACGCCCAGACGAATATGGCGCTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269347.10
ENST00000571554.5