RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB3IP (Homo sapiens)

Ensembl gene IDs: ENSG00000127328

Ensembl transcript IDs: ENST00000247833.12, ENST00000362025.9, ENST00000378809.8, ENST00000378815.10, ENST00000417413.7, ENST00000481897.1, ENST00000483530.6, ENST00000526994.6, ENST00000547055.1, ENST00000547591.5, ENST00000549760.1, ENST00000550536.5, ENST00000550647.5, ENST00000550847.1, ENST00000551641.5, ENST00000552199.5, ENST00000553099.5

Found 796 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGCCTTGCTCTTCCTAACAGCTCCTCCTTTCGTCTTTGCAGGCTaGTTCTCTGTCACAGGAACTCAGGGCTCAGTGCTGTACTTCATC +
Preference number: 1 (lower is better)
Translates to: VALLFLTAPPFVFAG*FSVTGTQGSVLYFI
Trigger: GATGAAGTACAGCACTGAGCCCTGAGTTCCTGTGACAGAGAAGCAGCCTGCAAAGACGAAAGGAGGAGCTGTTAGGAAGAGCAAGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CCA 90 bp TCCTACCTTGGCCTCCCAAAGCCAAGAGGCATGAGCCACTGGGCCTaGCCCAACTTTTCTAGTGAATGGTTTTTCACAGTGGATATACCA +
Preference number: 1 (lower is better)
Translates to: SYLGLPKPRGMSHWA*PNFSSEWFFTVDIP
Trigger: TGGTATATCCACTGTGAAAAACCATTCACTAGAAAAGTTGGGCCAGGCCCAGTGGCTCATGCCTCTTGGCTTTGGGAGGCCAAGGTAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 90 bp ACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCTaGAGTCATCTACAGGTAAGATTGACCAAACCTCTGAACAGGACT +
Preference number: 1 (lower is better)
Translates to: TPMSFCLWAPIQPGG*SHLQVRLTKPLNRT
Trigger: AGTCCTGTTCAGAGGTTTGGTCAATCTTACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR TCA 90 bp GGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCAATGACATCTCTTTTCTCAACTGCA +
Preference number: 1 (lower is better)
Translates to: GEFRHGPTQSIRVPL*NNPALPMTSLFSTA
Trigger: TGCAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR GCA 90 bp GTCTCCTGGAGACCACCGGAAATGAGTCATCACACTATAATCCACTaGCAAGTAATGATTCTGGATCCCGTCCACCAATTCACCCACAGA +
Preference number: 1 (lower is better)
Translates to: VSWRPPEMSHHTIIH*QVMILDPVHQFTHR
Trigger: TCTGTGGGTGAATTGGTGGACGGGATCCAGAATCATTACTTGGCAGTGGATTATAGTGTGATGACTCATTTCCGGTGGTCTCCAGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CCA 90 bp ACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTaGCTGAAGTCATCTACAGGTAAGATTGACCAAACCTCTGAACAG +
Preference number: 1 (lower is better)
Translates to: TYTNVLLSVGSHPAW*LKSSTGKIDQTSEQ
Trigger: CTGTTCAGAGGTTTGGTCAATCTTACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CCA 90 bp CCAAAACACTGTGAAGGACAAATAGCACATTGTGTGAAAACACAATaGAGCCCACAAGATGCAACCCTGGTGCCGAGATCTGCGGAAAGT +
Preference number: 1 (lower is better)
Translates to: PKHCEGQIAHCVKTQ*SPQDATLVPRSAES
Trigger: ACTTTCCGCAGATCTCGGCACCAGGGTTGCATCTTGTGGGCTCCATTGTGTTTTCACACAATGTGCTATTTGTCCTTCACAGTGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CCA 90 bp ATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTaGTGGCTGAAGTCATCTACAGGTAAGATTGACCAAACCTCTGAA +
Preference number: 1 (lower is better)
Translates to: ITYTNVLLSVGSHPA*WLKSSTGKIDQTSE
Trigger: TTCAGAGGTTTGGTCAATCTTACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR GCA 90 bp GTGGGGGCCTTGGAAAGTGAGTACTATCCACTCAGACTTCTTTCTTaGCTCTCACAAGGAAGGAAGCTACTGTGTAGTTTGAAAATTACT +
Preference number: 1 (lower is better)
Translates to: VGALESEYYPLRLLS*LSQGRKLLCSLKIT
Trigger: AGTAATTTTCAAACTACACAGTAGCTTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGTGGATAGTACTCACTTTCCAAGGCCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CCA 90 bp AGCGCCCATCTGATCCCATGGCTAACTACTCCCCAAATTTTCTCCTaGACTGACCTTACTGAATTTAGATTTGTACATCCAATACCTGCT +
Preference number: 1 (lower is better)
Translates to: SAHLIPWLTTPQIFS*TDLTEFRFVHPIPA
Trigger: AGCAGGTATTGGATGTACAAATCTAAATTCAGTAAGGTCAGTCCAGGAGAAAATTTGGGGAGTAGTTAGCCATGGGATCAGATGGGCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 90 bp AGTTTAAGAAGCTACTGCAAAATCCAGGTAGGCTGTAGTAAAGCCTaGAGCACGCGATGTAAAACAAAGCAATGGTTACTGGCTGGATGT +
Preference number: 1 (lower is better)
Translates to: SLRSYCKIQVGCSKA*STRCKTKQWLLAGC
Trigger: ACATCCAGCCAGTAACCATTGCTTTGTTTTACATCGCGTGCTTCAGGCTTTACTACAGCCTACCTGGATTTTGCAGTAGCTTCTTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 90 bp CGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATC +
Preference number: 1 (lower is better)
Translates to: RRASEFLFEITQLCQ*HLFSQLHNLPKHLI
Trigger: GATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR GCA 90 bp CATGACCTCAGACGTTCCTCCAAAAGTAAACTGTGTGTGAACTTGTaGTCCCTTGAGAAGCTGCCTTTAGGAAGGGTTTCAATTCTTTTA +
Preference number: 1 (lower is better)
Translates to: HDLRRSSKSKLCVNL*SLEKLPLGRVSILL
Trigger: TAAAAGAATTGAAACCCTTCCTAAAGGCAGCTTCTCAAGGGAGCACAAGTTCACACACAGTTTACTTTTGGAGGAACGTCTGAGGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 90 bp TCCTCAAATAGACTAGCTGTGAGTTCTTCCAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGCCTCTCACATTCTTCATCTTTTAAC +
Preference number: 1 (lower is better)
Translates to: SSNRLAVSSSNSCPS*SRTFESLSHSSSFN
Trigger: GTTAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATTGGAAGAACTCACAGCTAGTCTATTTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547591.5
3UTR TCA 90 bp TTCAGAAAACCAGCCCTCTTGTACACTGCTGCTGTGAATACAAATTaGTTAACTTTTCTGGATGGCAATCTAGCAATGCAGATCAAACAT +
Preference number: 1 (lower is better)
Translates to: FRKPALLYTAAVNTN*LTFLDGNLAMQIKH
Trigger: ATGTTTGATCTGCATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCTGGTTTTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CCA 90 bp TCTCAGAATTGCTTTTTCATTCTGAGTTATTGTGCTGCAAGTAGCTaGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGT +
Preference number: 1 (lower is better)
Translates to: SQNCFFILSYCAASS*YSFILLPCNNHPFC
Trigger: ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGCAGCACAATAACTCAGAATGAAAAAGCAATTCTGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 90 bp AAATACATATATATCTCGACACAATTTTATCTCCAGGCATCCACATaGAAGAACTCCACAATGTTCAGAAGTGTACAGATAAGGATACTC +
Preference number: 1 (lower is better)
Translates to: KYIYISTQFYLQAST*KNSTMFRSVQIRIL
Trigger: GAGTATCCTTATCTGTACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGTGTCGAGATATATATGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR TCA 90 bp GAACATGTCATTGTCATCTTGATTTACGTTTTCCTGATTGAGAGATaGAAACCTCTTAATGTTTATTGGCCCACATGCACTTCTAATTGT +
Preference number: 1 (lower is better)
Translates to: EHVIVILIYVFLIER*KPLNVYWPTCTSNC
Trigger: ACAATTAGAAGTGCATGTGGGCCAATAAACATTAAGAGGTTTTCATCTCTCAATCAGGAAAACGTAAATCAAGATGACAATGACATGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGGGGGGCCTTGGAAAGTaGGTACTATCCACTCAGACT +
Preference number: 2 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWGGLGK*VLSTQT
Trigger: AGTCTGAGTGGATAGTACTCACTTTCCAAGGCCCCC...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACACTCACCACAACCTCTaGCTCCTGGGTTCGAGCGTT +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNTHHNL*LLGSSV
Trigger: AACGCTCGAACCCAGGAGGCAGAGGTTGTGGTGAGT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACGGCTCCCATCCAGCCTaGTGGCTGAAGTCATCTACA +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNGSHPA*WLKSST
Trigger: TGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCC...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACAAGATGCAACCCTGGTaGCGAGATCTGCGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNKMQPW*RDLRKV
Trigger: CACTTTCCGCAGATCTCGGCACCAGGGTTGCATCTT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACCAGGCTGGAGTGCAATaGCGTGATGTCAACTCACCA +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNQAGVQ*RDVNSP
Trigger: TGGTGAGTTGACATCACGCCATTGCACTCCAGCCTG...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAAATCTGGGGATGTGGTaGTGGGGGCCCTGTATCCCT +
Preference number: 2 (lower is better)
Translates to: TFPRELQQIQIKAELLRLNLGMW*WGPCIP
Trigger: AGGGATACAGGGCCCCCATCACCACATCCCCAGATT...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 2 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTCCTCCTTTCGTCTTTaGAGGCTGCTTCTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNSSFRL*RLLLCH
Trigger: GTGACAGAGAAGCAGCCTGCAAAGACGAAAGGAGGA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 2 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
3UTR-3UTR GCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCTCAGACTTCTTTCTTaGCTCTCACAAGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWLRLLS*LSQGRK
Trigger: CTTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACGCCCATCTGATCCCATaGCTAACTACTCCCCAAATT +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNAHLIP*LTTPQI
Trigger: AATTTGGGGAGTAGTTAGCCATGGGATCAGATGGGC...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CAA 90 bp TCTCCTGAACATAATCAGCATGCTGGTTCTTCCTTTTCTGTTGCCTaGCTCTTCCTAACAGCTCCTCCTTTCGTCTTTGCAGGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SPEHNQHAGSSFSVA*LFLTAPPFVFAGCF
Trigger: GAAGCAGCCTGCAAAGACGAAAGGAGGAGCTGTTAGGAAGAGCAAGGCAACAGAAAAGGAAGAACCAGCATGCTGATTATGTTCAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CAA 90 bp ACAGCAGACATTAGTGCAGGAGTTCAGGTGAAAGATGATAATAGCTaGGGCAGAGTGGTAGCAGTGGACATGGAGGGAGGTAGACAGATT +
Preference number: 2 (lower is better)
Translates to: TADISAGVQVKDDNS*GRVVAVDMEGGRQI
Trigger: AATCTGTCTACCTCCCTCCATGTCCACTGCTACCACTCTGCCCAAGCTATTATCATCTTTCACCTGAACTCCTGCACTAATGTCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACGTGCAGGAGTTCAGGTaGAAGATGATAATAGCTTGG +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNVQEFR*KMIIAW
Trigger: CCAAGCTATTATCATCTTTCACCTGAACTCCTGCAC...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 2 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 2 (lower is better)
Translates to: SSGMVPRRASEFLFEITQTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: SSGMVPRRASEFLFEITQTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
3UTR-3UTR GCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTTCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 2 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378809.8
3UTR-3UTR TCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAAACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 2 (lower is better)
Translates to: MVPRRASEFLFEITQLCQTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCAGTTACATACAGAAGTaGTTTTGGTCCTCCGCATTC +
Preference number: 2 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFSYIQK*FWSSAF
Trigger: GAATGCGGAGGACCAAAATCACTTCTGTATGTAACT...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378809.8
3UTR-3UTR CCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTGGCTCCCATCCAGCCTaGTGGCTGAAGTCATCTACA +
Preference number: 2 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSGSHPA*WLKSST
Trigger: TGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCC...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CAA 90 bp CCTCATGACCTCAGACGTTCCTCCAAAAGTAAACTGTGTGTGAACTaGTGCTCCCTTGAGAAGCTGCCTTTAGGAAGGGTTTCAATTCTT +
Preference number: 2 (lower is better)
Translates to: PHDLRRSSKSKLCVN*CSLEKLPLGRVSIL
Trigger: AAGAATTGAAACCCTTCCTAAAGGCAGCTTCTCAAGGGAGCACAAGTTCACACACAGTTTACTTTTGGAGGAACGTCTGAGGTCATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTGGGGGCCTTGGAAAGTaGGTACTATCCACTCAGACT +
Preference number: 2 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSGGLGK*VLSTQT
Trigger: AGTCTGAGTGGATAGTACTCACTTTCCAAGGCCCCC...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTGCCCAAGTTGGACTTaGACCCCTGGGCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCCPSWT*TPGLKQ
Trigger: TTGCTTGAGCCCAGGGGTTCAAGTCCAACTTGGGCA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAAATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: MVPRRASEFLFEITQLCQIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: SGSSGMVPRRASEFLFEISYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
3UTR-3UTR GCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAAGGCATGAGCCACAATaGCTAACTACTGATGCACGA +
Preference number: 2 (lower is better)
Translates to: TFPRELQQIQIKAELLRLRHEPQ*LTTDAR
Trigger: TCGTGCATCAGTAGTTAGGCATTGTGGCTCATGCCT...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACCCCATCTCAATAAACTaGAATAGCTCAAGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNPISIN*NSSSQK
Trigger: CTTTTGGCTTGAGCTATTGCAGTTTATTGAGATGGG...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR GCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 2 (lower is better)
Translates to: GSSGMVPRRASEFLFEITISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR GCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 2 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR GCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 2 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR GCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 2 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR CCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTCCCATCCAGCCTGGTaGCTGAAGTCATCTACAGGT +
Preference number: 2 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSSHPAW*LKSSTG
Trigger: ACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR TCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFSYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
3UTR-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTTGATATCCCCATTTTaGAGAGTTTCGGTAGAGAAT +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNLISPF*RVSVEN
Trigger: ATTCTCTACCGAAACTCTGCAAAATGGGGATATCAA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTCCCATCCAGCCTGGTaGCTGAAGTCATCTACAGGT +
Preference number: 2 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCSHPAW*LKSSTG
Trigger: ACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGGGGGCCTTGGAAAGTaGGTACTATCCACTCAGACT +
Preference number: 2 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNGGLGK*VLSTQT
Trigger: AGTCTGAGTGGATAGTACTCACTTTCCAAGGCCCCC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTATCCAGCCTGGTGGCTaGAGTCATCTACAGGTAAGA +
Preference number: 2 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCIQPGG*SHLQVR
Trigger: TCTTACCTGTAGATGACTTCAGCCACCAGGCTGGAT...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACTCAGACTTCTTTCTTaGCTCTCACAAGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: DKNKAILEVGALESEYYPLRLLS*LSQGRK
Trigger: CTTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACAAATTCATACTGCATTaGACTCTTTTAAGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNKFILH*TLLSSV
Trigger: GACACTGCTTAAAAGAGTCCAATGCAGTATGAATTT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp ATGTTGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAAAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: MLENWTIQVSSMQLLQLENFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...TTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547591.5
3UTR-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCATCTGCTAACCCTAAATaGCATGTCAGAGCTAGAAGA +
Preference number: 2 (lower is better)
Translates to: DKNKAILEVGALESEYYPSANPK*HVRARR
Trigger: TCTTCTAGCTCTGACATGGCATTTAGGGTTAGCAGA...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR GCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAACCTGGTTCAGTCTTTTaGCTGTTTTTCTGTGACACT +
Preference number: 2 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQPGSVF*LFFCDT
Trigger: AGTGTCACAGAAAAACAGGCAAAAGACTGAACCAGG...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAGAATTTGCTGATAACTaGAATGGGAGTGACAATGAC +
Preference number: 2 (lower is better)
Translates to: TFPRELQQIQIKAELLRLEFADN*NGSDND
Trigger: GTCATTGTCACTCCCATTCCAGTTATCAGCAAATTC...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTCCCTTTAAACCCCTTTaGCACACGTCAAACTCATTT +
Preference number: 2 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSPFKPL*HTSNSF
Trigger: AAATGAGTTTGACGTGTGTCAAAGGGGTTTAAAGGG...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATCTCCAGGCATCCACATaGAAGAACTCCACAATGTTC +
Preference number: 2 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNLQAST*KNSTMF
Trigger: GAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAG...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR TCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAGCTGTGAATACAAATTaGTTAACTTTTCTGGATGGC +
Preference number: 2 (lower is better)
Translates to: TFPRELQQIQIKAELLRLAVNTN*LTFLDG
Trigger: GCCATCCAGAAAAGTTAATCAATTTGTATTCACAGC...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAAAGTGGATATACCAATTaGTACCCCCATCAGCAATAT +
Preference number: 2 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQSGYTN*YPHQQY
Trigger: ATATTGCTGATGGGGGTATCAATTGGTATATCCACT...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 2 (lower is better)
Translates to: LFSQLHNLPKHLINILLFIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
3UTR-3UTR TCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGGTAGAAAATGGAACTaGAGAATCCCTGAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLGRKWN*RIPESS
Trigger: GCTGCTTTCAGGGATTCTTCAGTTCCATTTTCTACC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
3UTR-3UTR TCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTTTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 2 (lower is better)
Translates to: LFSQLHNLPKHLINILLFFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
3UTR CAA 90 bp CTTCAGAAAACCAGCCCTCTTGTACACTGCTGCTGTGAATACAAATaGATTAACTTTTCTGGATGGCAATCTAGCAATGCAGATCAAACA +
Preference number: 2 (lower is better)
Translates to: LQKTSPLVHCCCEYK*INFSGWQSSNADQT
Trigger: TGTTTGATCTGCATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCTGGTTTTCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR TCA 90 bp TGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAAGTACTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 2 (lower is better)
Translates to: WRTGQYKCLQCSYFSLKYSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...GTACTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547591.5
3UTR-3UTR GCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTCTGCTAACCCTAAATaGCATGTCAGAGCTAGAAGA +
Preference number: 2 (lower is better)
Translates to: TILSPGIHMKELHNVQKCSANPK*HVRARR
Trigger: TCTTCTAGCTCTGACATGGCATTTAGGGTTAGCAGA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR GCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATCTCAGACTTCTTTCTTaGCTCTCACAAGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNLRLLS*LSQGRK
Trigger: CTTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAG...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR GCA 90 bp GATCTCGCACTTTTGAAAGCCTCTCACATTCTTCATCTTTTAACTTCAGTTCCCCAAAAATATCATCACTaGCATCGCAAGCCTCTGTTA +
Preference number: 2 (lower is better)
Translates to: DLALLKASHILHLLTSVPQKYHH*HRKPLL
Trigger: TAACAGAGGCTTGCGATGGCAGTGATGATATTTTTG...GGGAACTGAAGTTAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000547591.5
3UTR CAA 90 bp CTACTCCCCAAATTTTCTCCTGGACTGACCTTACTGAATTTAGATTaGTACATCCAATACCTGCTTAACATATCCACTTTGATGCTCAGT +
Preference number: 2 (lower is better)
Translates to: LLPKFSPGLTLLNLD*YIQYLLNISTLMLS
Trigger: ACTGAGCATCAAAGTGGATATGTTAAGCAGGTATTGGATGTACAAATCTAAATTCAGTAAGGTCAGTCCAGGAGAAAATTTGGGGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTCTATGTCCCTCCAATaGCAATATAGTGGTCAACAC +
Preference number: 2 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFSMSLQ*QYSGQH
Trigger: GTGTTGACCACTATATTGTCATTGGAGGGACATAGA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp ACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAAGTACATCAATGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 2 (lower is better)
Translates to: TGQYKCLQCSYFSLKYINAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...ATTGATGTACTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547591.5
3UTR-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTCCTCTTGTACACTGCTaGTGTGAATACAAATTGATT +
Preference number: 2 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSPLVHC*CEYKLI
Trigger: AATCAATTTGTATTCACAGCAGCAGTGTACAAGAGG...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CAA 90 bp TTCATTCTGAGTTATTGTGCTGCAAGTAGCTGGTATTCATTCATTTaGCTGCCATGTAATAATCACCCATTCTGTGAACACATTACACCT +
Preference number: 2 (lower is better)
Translates to: FILSYCAASSWYSFI*LPCNNHPFCEHITP
Trigger: AGGTGTAATGTGTTCACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGCAGCACAATAACTCAGAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTCAATTTCACATTCTTaGGCTAGGCATGGTACTGAT +
Preference number: 2 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFSISHS*ARHGTD
Trigger: ATCAGTACCATGCCTAGCTCAAGAATGTGAAATTGA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTGTGCTGCAAGTAGCTaGTATTCATTCATTTTGCTG +
Preference number: 2 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFCAASS*YSFILL
Trigger: CAGCAAAATGAATGAATACCAGCTACTTGCAGCACA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCATTAACTTTTCTGGATaGCAATCTAGCAATGCAGAT +
Preference number: 2 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFINFSG*QSSNAD
Trigger: ATCTGCATTGCTAGATTGCCATCCAGAAAAGTTAAT...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR GCA 72 bp GAGTGCAATGGCGTGATGTCAACTCACCACAACCTCTaGCTCCTGGGTTCGAGCGTTTCTCCTGACTCAGCC +
Preference number: 3 (lower is better)
Translates to: ECNGVMSTHHNL*LLGSSVSPDSA
Trigger: GGCTGAGTCAGGAGAAACGCTCGAACCCAGGAGGCAGAGGTTGTGGTGAGTTGACATCACGCCATTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR GCA 72 bp TGCCTTGCTCTTCCTAACAGCTCCTCCTTTCGTCTTTaGAGGCTGCTTCTCTGTCACAGGAACTCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: CLALPNSSSFRL*RLLLCHRNSGL
Trigger: GAGCCCTGAGTTCCTGTGACAGAGAAGCAGCCTGCAAAGACGAAAGGAGGAGCTGTTAGGAAGAGCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CCA 72 bp ACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTaGTGGCTGAAGTCATCTACAGGTAAGATTGACCAA +
Preference number: 3 (lower is better)
Translates to: TNVLLSVGSHPA*WLKSSTGKIDQ
Trigger: TTGGTCAATCTTACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR CAA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGACTCAGACTTCTTTCTaGCCTCTCACAAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWTQTSF*PLTRKE
Trigger: TTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGT...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CCA 72 bp GAGAGGAGTGGCCACCTAACTAACCTTCCCAGTTTTTaGGAGCCAAACCTAGACCAGAATGTAGGTCTAAGT +
Preference number: 3 (lower is better)
Translates to: ERSGHLTNLPSF*EPNLDQNVGLS
Trigger: ACTTAGACCTACATTCTGGTCTAGGTTTGGCTCCCAAAAACTGGGAAGGTTAGTTAGGTGGCCACTCCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACACTCAGACTTCTTTCTaGCCTCTCACAAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNTQTSF*PLTRKE
Trigger: TTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACCATCTACAGGTAAGATaGACCAAACCTCTGAACAGG +
Preference number: 3 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNHLQVR*TKPLNR
Trigger: CCTGTTCAGAGGTTTGGTCAATCTTACCTGTAGATG...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCATACAGAAGTGATTTaGGTCCTCCGCATTCAACTG +
Preference number: 3 (lower is better)
Translates to: SSGMVPRRASEFLFEITQHTEVI*VLRIQL
Trigger: CAGTTGAATGCGGAGGACCAAAATCACTTCTGTATG...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378809.8
3UTR TCA 72 bp AGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCAATGACATCTCTTTTC +
Preference number: 3 (lower is better)
Translates to: RHGPTQSIRVPL*NNPALPMTSLF
Trigger: GAAAAGAGATGTCATTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR CCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATaGAGTTTCCCTATTTTTCCCAGGCCCGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVCK*SFPIFPRPVSN
Trigger: GTTTGAGACGGGCCTGGGAAAAATAGGGAAACTCCATTTACACACACACACACACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CCA 72 bp TTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAA +
Preference number: 3 (lower is better)
Translates to: FSHFSVIRGVQA*SHAEHQSSSLK
Trigger: TTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR CAA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTCCTATGTTGCCCAAGTaGGACTTGAACCCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCPMLPK*DLNPWA
Trigger: AGCCCAGGGGTTCAAGTCCAACTTGGGCAACATAGG...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTACTTAACATATCCACTTaGATGCTCAGTGGGCACCTC +
Preference number: 3 (lower is better)
Translates to: TFPRELQQIQIKAELLRLLNIST*MLSGHL
Trigger: GAGGTGCCCACTGAGCATCAAAGTGGATATGTTAAG...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTATCCTTTTCTGTTGCCTaGCTCTTCCTAACAGCTCCT +
Preference number: 3 (lower is better)
Translates to: TFPRELQQIQIKAELLRLSFSVA*LFLTAP
Trigger: AGGAGCTGTTAGGAAGAGCAAGGCAACAGAAAAGGA...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR GCA 72 bp AGACGTTCCTCCAAAAGTAAACTGTGTGTGAACTTGTaGTCCCTTGAGAAGCTGCCTTTAGGAAGGGTTTCA +
Preference number: 3 (lower is better)
Translates to: RRSSKSKLCVNL*SLEKLPLGRVS
Trigger: TGAAACCCTTCCTAAAGGCAGCTTCTCAAGGGAGCACAAGTTCACACACAGTTTACTTTTGGAGGAACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR GCA 72 bp AGACCACCGGAAATGAGTCATCACACTATAATCCACTaGCAAGTAATGATTCTGGATCCCGTCCACCAATTC +
Preference number: 3 (lower is better)
Translates to: RPPEMSHHTIIH*QVMILDPVHQF
Trigger: GAATTGGTGGACGGGATCCAGAATCATTACTTGGCAGTGGATTATAGTGTGATGACTCATTTCCGGTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACCAAATTCATACTGCATaGGACTCTTTTAAGCAGTGT +
Preference number: 3 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNQIHTA*DSFKQC
Trigger: ACACTGCTTAAAAGAGTCCAATGCAGTATGAATTTG...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 72 bp AGCTACTGCAAAATCCAGGTAGGCTGTAGTAAAGCCTaGAGCACGCGATGTAAAACAAAGCAATGGTTACTG +
Preference number: 3 (lower is better)
Translates to: SYCKIQVGCSKA*STRCKTKQWLL
Trigger: CAGTAACCATTGCTTTGTTTTACATCGCGTGCTTCAGGCTTTACTACAGCCTACCTGGATTTTGCAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 72 bp CCAGCCCTCTTGTACACTGCTGCTGTGAATACAAATTaGTTAACTTTTCTGGATGGCAATCTAGCAATGCAG +
Preference number: 3 (lower is better)
Translates to: PALLYTAAVNTN*LTFLDGNLAMQ
Trigger: CTGCATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR TCA 72 bp AACACACAGGATTCTTGTGGTGGCGATGGGAGTAAGTaGAGACGTAACAGGTTGCAAGTTATTTTAAGGACT +
Preference number: 3 (lower is better)
Translates to: NTQDSCGGDGSK*RRNRLQVILRT
Trigger: AGTCCTTAAAATAACTTGCAACCTGTTACGTCTTCACTTACTCCCATCGCCACCACAAGAATCCTGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 72 bp AGACTAGCTGTGAGTTCTTCCAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGCCTCTCACATTCTTCA +
Preference number: 3 (lower is better)
Translates to: RLAVSSSNSCPS*SRTFESLSHSS
Trigger: TGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATTGGAAGAACTCACAGCTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547591.5
3UTR GCA 72 bp TTGGAAAGTGAGTACTATCCACTCAGACTTCTTTCTTaGCTCTCACAAGGAAGGAAGCTACTGTGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: LESEYYPLRLLS*LSQGRKLLCSL
Trigger: CAAACTACACAGTAGCTTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGTGGATAGTACTCACTTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CCA 72 bp CATGATACAATCCCATTTAACTCAGAGAGATCTCTGTaGCAGAATGTGTTGGCTGGGGCAATATCCAAAGTT +
Preference number: 3 (lower is better)
Translates to: HDTIPFNSERSL*QNVLAGAISKV
Trigger: AACTTTGGATATTGCCCCAGCCAACACATTCTGCCACAGAGATCTCTCTGAGTTAAATGGGATTGTATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTACTCAGACTTCTTTCTaGCCTCTCACAAGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSTQTSF*PLTRKE
Trigger: TTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR CAA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTCATCTACAGGTAAGATaGACCAAACCTCTGAACAGG +
Preference number: 3 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSHLQVR*TKPLNR
Trigger: CCTGTTCAGAGGTTTGGTCAATCTTACCTGTAGATG...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR-3UTR CAA 90 bp TTCTGCTGTTGCCTGCTTGATATTTGCTTCTCTCACCATTTTATGAGCTTCCTCGTTGATCTCGCACTTTaGAAAGCCTCTCACATTCTT +
Preference number: 3 (lower is better)
Translates to: FCCCLLDICFSHHFMSFLVDLAL*KASHIL
Trigger: AAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAAC...GAGGAAGCTCATAAAATGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547591.5
3UTR TCA 72 bp TACCATTCATTCAATCCACACCCCTTTAAACCCCTTTaGCACACGTCAAACTCATTTACATCTATGTCCCTC +
Preference number: 3 (lower is better)
Translates to: YHSFNPHPFKPL*HTSNSFTSMSL
Trigger: GAGGGACATAGATGTAAATGAGTTTGACGTGTGTCAAAGGGGTTTAAAGGGGTGTGGATTGAATGAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR TCA 72 bp CTGGGGGACCTGTGCAAGCATTTCTCAAGTATATACTaGAAAGTGAAATTGCTGACCCATGGGTATACTTTT +
Preference number: 3 (lower is better)
Translates to: LGDLCKHFSSIY*KVKLLTHGYTF
Trigger: AAAAGTATACCCATGGGTCAGCAATTTCACTTTTCAGTATATACTTGAGAAATGCTTGCACAGGTCCCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 72 bp ATTTGTACATCCAATACCTGCTTAACATATCCACTTTaGTGCTCAGTGGGCACCTCACACTTGATCTGTCAA +
Preference number: 3 (lower is better)
Translates to: ICTSNTCLTYPL*CSVGTSHLICQ
Trigger: TTGACAGATCAAGTGTGAGGTGCCCACTGAGCATCAAAGTGGATATGTTAAGCAGGTATTGGATGTACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CCA 72 bp CTGATCCCATGGCTAACTACTCCCCAAATTTTCTCCTaGACTGACCTTACTGAATTTAGATTTGTACATCCA +
Preference number: 3 (lower is better)
Translates to: LIPWLTTPQIFS*TDLTEFRFVHP
Trigger: TGGATGTACAAATCTAAATTCAGTAAGGTCAGTCCAGGAGAAAATTTGGGGAGTAGTTAGCCATGGGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 72 bp TCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTGCATAACCTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: SEFLFEITQLCQ*HLFSQLHNLPK
Trigger: TTTTGGGAGGTTATGCAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
3UTR-3UTR CAA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTAGTCAGTTTTACAATTaGGAATGCAGAGATCAAGTG +
Preference number: 3 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSSQFYN*ECRDQV
Trigger: CACTTGATCTCTGCATTCCAAATTGTAAAACTGACT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR GCA 72 bp TGTTATCTTCAGAAAACCAGCCCTCTTGTACACTGCTaGTGTGAATACAAATTGATTAACTTTTCTGGATGG +
Preference number: 3 (lower is better)
Translates to: CYLQKTSPLVHC*CEYKLINFSGW
Trigger: CCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCTGGTTTTCTGAAGATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR GCA 72 bp GTTATTGTGCTGCAAGTAGCTGGTATTCATTCATTTTaGTGCCATGTAATAATCACCCATTCTGTGAACACA +
Preference number: 3 (lower is better)
Translates to: VIVLQVAGIHSF*CHVIITHSVNT
Trigger: TGTGTTCACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGCAGCACAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 72 bp TATATCTCGACACAATTTTATCTCCAGGCATCCACATaGAAGAACTCCACAATGTTCAGAAGTGTACAGATA +
Preference number: 3 (lower is better)
Translates to: YISTQFYLQAST*KNSTMFRSVQI
Trigger: TATCTGTACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGTGTCGAGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR GCA 72 bp ATTGTGCTGCAAGTAGCTGGTATTCATTCATTTTGCTaGCATGTAATAATCACCCATTCTGTGAACACATTA +
Preference number: 3 (lower is better)
Translates to: IVLQVAGIHSFC*HVIITHSVNTL
Trigger: TAATGTGTTCACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGCAGCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR-3UTR CAA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCAGTCAGTTTTACAATTaGGAATGCAGAGATCAAGTG +
Preference number: 3 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFSQFYN*ECRDQV
Trigger: CACTTGATCTCTGCATTCCAAATTGTAAAACTGACT...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR TCA 72 bp ATTGTCATCTTGATTTACGTTTTCCTGATTGAGAGATaGAAACCTCTTAATGTTTATTGGCCCACATGCACT +
Preference number: 3 (lower is better)
Translates to: IVILIYVFLIER*KPLNVYWPTCT
Trigger: AGTGCATGTGGGCCAATAAACATTAAGAGGTTTTCATCTCTCAATCAGGAAAACGTAAATCAAGATGACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR GCA 72 bp AAATGTTATCTTCAGAAAACCAGCCCTCTTGTACACTaGTGCTGTGAATACAAATTGATTAACTTTTCTGGA +
Preference number: 3 (lower is better)
Translates to: KCYLQKTSPLVH*CCEYKLINFSG
Trigger: TCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCTGGTTTTCTGAAGATAACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR TCA 72 bp GTCACATATAGTTTTCTCAGAATTGCTTTTTCATTCTaGGTTATTGTGCTGCAAGTAGCTGGTATTCATTCA +
Preference number: 3 (lower is better)
Translates to: VTYSFLRIAFSF*VIVLQVAGIHS
Trigger: TGAATGAATACCAGCTACTTGCAGCACAATAACTCAGAATGAAAAAGCAATTCTGAGAAAACTATATGTGAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CCA 72 bp TTTAATTTATTCCAGAACATTCTTATATGTGTGATCTaGGGGACCTGTGCAAGCATTTCTCAAGTATATACT +
Preference number: 3 (lower is better)
Translates to: FNLFQNILICVI*GTCASISQVYT
Trigger: AGTATATACTTGAGAAATGCTTGCACAGGTCCCCCAGATCACACATATAAGAATGTTCTGGAATAAATTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTCCAGGTCCACAGCCCTaGCGCGCGGCGTCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFPGPQP*RAASGV
Trigger: AACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGG...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCCAGGTCCACAGCCCTaGCGCGCGGCGTCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWPGPQP*RAASGV
Trigger: AACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR GCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAGCGACTCCGGGCGCCTaGCCGGAATTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIATPGA*PEFPTR
Trigger: CCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGC...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTGCGACTCCGGGCGCCTaGCCGGAATTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPATPGA*PEFPTR
Trigger: CCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGC...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCTGGCGGCACGGAGCTaGCTACTTGGGCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITLAARS*LLGRDS
Trigger: GGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAG...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACGGAGCTGCCTACTTaGGCGCGACTCCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEITELPT*ARLRAP
Trigger: AGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGT...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGACGGAGCTGCCTACTTaGGCGCGACTCCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQTELPT*ARLRAP
Trigger: AGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGT...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTGGCGGCACGGAGCTaGCTACTTGGGCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQLAARS*LLGRDS
Trigger: GGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAG...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCACGGAGCTGCCTACTTaGGCGCGACTCCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFTELPT*ARLRAP
Trigger: AGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGT...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR TCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCGAAACCTCCCGAGGGTaGCCTCTACGCCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITETSRG*PLRLST
Trigger: CGTGCTGAGGCGTAGAGGTCACCCTCGGGAGGTTTC...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTCCCCGAACACAAGTCTaGCGGCACGGAGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFPRTQV*RHGAAY
Trigger: GTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGG...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGCCCCGAACACAAGTCTaGCGGCACGGAGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQPRTQV*RHGAAY
Trigger: GTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGG...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR TCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCGGCGTCCGGTGTTGTaGGCTGCTTCCGACTTGTTC +
Preference number: 4 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPRRPVL*AASDLF
Trigger: GAACAAGTCGGAAGCAGCTCACAACACCGGACGCCG...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGAAACCTCCCGAGGGTaGCCTCTACGCCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSETSRG*PLRLST
Trigger: CGTGCTGAGGCGTAGAGGTCACCCTCGGGAGGTTTC...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGCTGGCGGCACGGAGCTaGCTACTTGGGCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQLAARS*LLGRDS
Trigger: GGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAG...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATACGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACGGAGCTGCCTACTTaGGCGCGACTCCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQTELPT*ARLRAP
Trigger: AGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCCCCGAACACAAGTCTaGCGGCACGGAGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSPRTQV*RHGAAY
Trigger: GTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCCCCGAACACAAGTCTaGCGGCACGGAGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFPRTQV*RHGAAY
Trigger: GTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGG...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAGCGAGTTGTCAACGCTaGGAGGGCAGAGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIASCQR*EGRAMQ
Trigger: TTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGC...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR TCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCCATCATAAGATAACCTaGAGAACCCACCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIHHKIT*RTHRGR
Trigger: GCGGCCGCGGTGGGTTCTTCAGGTTATCTTATGATG...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000483530.6
CDS-3UTR TCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGAAACCTCCCGAGGGTaGCCTCTACGCCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQETSRG*PLRLST
Trigger: CGTGCTGAGGCGTAGAGGTCACCCTCGGGAGGTTTC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCCCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTCCAGGTCCACAGCCCTaGCGCGCGGCGTCCGGTGTT +
Preference number: 4 (lower is better)
Translates to: LFSQLHNLPKHLINILLFPGPQP*RAASGV
Trigger: AACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGG...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCTACGCCTCAGCACGGTaGCTCGCGCGTAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFYASAR*LARSFL
Trigger: TAGGAAACTACGCGCGAGGCACCGTGCTGAGGCGTA...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTACGCCTCAGCACGGTaGCTCGCGCGTAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSYASAR*LARSFL
Trigger: TAGGAAACTACGCGCGAGGCACCGTGCTGAGGCGTA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTATGCAATCCCACCCGTaGAGTTCGTCTCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPMQSHP*SSSQLP
Trigger: GGGGAGTTGAGACGAACTGCACGGGTGGGATTGCAT...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAERGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGGCGAGTTGTCAACGCTaGGAGGGCAGAGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQASCQR*EGRAMQ
Trigger: TTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGC...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
3UTR CAA 72 bp ACCCGACAGGTGGAGTCACTCAGCTCCACCCAAGTGTaGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAA +
Preference number: 4 (lower is better)
Translates to: TRQVESLSSTQV*SFKTVGSVLSK
Trigger: TTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGAGTGACTCCACCTGTCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGCATCATAAGATAACCTaGAGAACCCACCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLHHKIT*RTHRGR
Trigger: GCGGCCGCGGTGGGTTCTTCAGGTTATCTTATGATG...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCTTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITLAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCTTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSILAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTGCCCAAGTTGGACTTaGACCCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNCPSWT*TPGLKQ
Trigger: TTGCTTGAGCCCAGGGGTTCAAGTCCAACTTGGGCA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAATCTGGGGATGTGGTaGTGGGGGCCCTGTATCCCT +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAENLGMW*WGPCIP
Trigger: AGGGATACAGGGCCCCCATCACCACATCCCCAGATT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGCGGCGTCCGGTGTTGTaGGCTGCTTCCGACTTGTTC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQRRPVL*AASDLF
Trigger: GAACAAGTCGGAAGCAGCTCACAACACCGGACGCCG...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATATCCGGTGTTGTGAGCTaGTTCCGACTTGTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEISGVVS*FRLVRE
Trigger: TTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGA...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTACGCCTCAGCACGGTaGCTCGCGCGTAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEYASAR*LARSFL
Trigger: TAGGAAACTACGCGCGAGGCACCGTGCTGAGGCGTA...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTGCGACTCCGGGCGCCTaGCCGGAATTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LFSQLHNLPKHLINILLFATPGA*PEFPTR
Trigger: CCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGC...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGATGCAATCCCACCCGTaGAGTTCGTCTCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQMQSHP*SSSQLP
Trigger: GGGGAGTTGAGACGAACTGCACGGGTGGGATTGCAT...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACATGCAATCCCACCCGTaGAGTTCGTCTCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNMQSHP*SSSQLP
Trigger: GGGGAGTTGAGACGAACTGCACGGGTGGGATTGCAT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR GCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCGGCAACTCTTCACATaGTGCGACTTCCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFRQLFT*CDFHPA
Trigger: TGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTGCCG...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCGGCAACTCTTCACATaGTGCGACTTCCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQRQLFT*CDFHPA
Trigger: TGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTGCCG...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLTSCPL*AHPSTI
Trigger: GATTGTGGAAGGATGAGCCCACAATGGACAGGACGT...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCCCGTCTCAAACTCCTaGGCTCAAGCAGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWPVSNS*AQAAQV
Trigger: TACTTGAGCTGCTTGAGCCCAGGAGTTTGAGACGGG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACGTAGGAGGGCAGGAGTaGATGCAAGGACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNVGGQE*MQGQQT
Trigger: TGTCTGCTGTCCTTGCATCCACTCCTGCCCTCCTAC...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCACAACCTCTGCCTCCTaGGTTCGAGCGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSTTSAS*VRAFLL
Trigger: CAGGAGAAACGCTCGAACCCAGGAGGCAGAGGTTGT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCACAAGATGCAACCCTaGTGCCGAGATCTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWHKMQP*CRDLRK
Trigger: TTTCCGCAGATCTCGGCACCAGGGTTGCATCTTGTG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCGTAGATGACACTTGGTaGGGTAGTCTGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLVDDTW*GSLLLS
Trigger: ACTCAAGAGCAGACTACCTCACCAAGTGTCATCTAC...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGTTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLLAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGTTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQLAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR GCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTCCGGTGTTGTGAGCTaGTTCCGACTTGTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNSGVVS*FRLVRE
Trigger: TTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTCCGGTGTTGTGAGCTaGTTCCGACTTGTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSSGVVS*FRLVRE
Trigger: TTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTACGCCTCAGCACGGTaGCTCGCGCGTAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQYASAR*LARSFL
Trigger: TAGGAAACTACGCGCGAGGCACCGTGCTGAGGCGTA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATGCAATCCCACCCGTaGAGTTCGTCTCAACTCCCC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEMQSHP*SSSQLP
Trigger: GGGGAGTTGAGACGAACTGCACGGGTGGGATTGCAT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCAACTCTTCACATGCTaGGACTTCCACCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWQLFTC*DFHPAS
Trigger: TGATGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR GCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAACGGCAACTCTTCACATaGTGCGACTTCCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: MVPRRASEFLFEITQLCQRQLFT*CDFHPA
Trigger: TGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTGCCG...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAERCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQTSCPL*AHPSTI
Trigger: GATTGTGGAAGGATGAGCCCACAATGGACAGGACGT...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTACGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACATGTCCTTTTGTCTGTaGGCTCCCATCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNMSFCL*APIQPG
Trigger: ACCAGGCTGGATGGGAGCCCACAGACAAAAGGACAT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCAGGCTGGAGTGCAATaGCGTGATGTCAACTCACCA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSQAGVQ*RDVNSP
Trigger: TGGTGAGTTGACATCACGCCATTGCACTCCAGCCTG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGAGTTGTCAACGCTaGGAGGGCAGAGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRASCQR*EGRAMQ
Trigger: TTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGCATCATAAGATAACCTaGAGAACCCACCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQHHKIT*RTHRGR
Trigger: GCGGCCGCGGTGGGTTCTTCAGGTTATCTTATGATG...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000247833.12
ENST00000417413.7
ENST00000483530.6
CDS-3UTR TCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGTAGATGACACTTGGTaGGGTAGTCTGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFVDDTW*GSLLLS
Trigger: ACTCAAGAGCAGACTACCTCACCAAGTGTCATCTAC...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAAAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: MVPRRASEFLFEITQLCQRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAERLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAELAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCCAGCCTGGTGGCTaGAGTCATCTACAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSIQPGG*SHLQVR
Trigger: TCTTACCTGTAGATGACTTCAGCCACCAGGCTGGAT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGGAATGTAGGTCTAAGTaGCTCCCAATCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWECRSK*LPIQSC
Trigger: ACAGCTCTGGATTGGGAGTCACTTAGACCTACATTC...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGAACTTGTGCTCCCTTaGGAAGCTGCCTTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSELVLP*EAAFRK
Trigger: CTTCCTAAAGGCAGCTTCTCAAGGGAGCACAAGTTC...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTCCAGAGCACTCCACTaGGAGCACAATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQSRALH*EHNPAA
Trigger: AGCAGCTGGATTGTGCTCTCAGTGGAGTGCTCTGGA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGTTCTCAGCAGCACAGTaGTGTGACAGGAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWFSAAQ*CDRKHH
Trigger: ATGATGCTTCCTGTCACATCACTGTGCTGCTGAGAA...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGTCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCCTGGCGGCACGGAGCTaGCTACTTGGGCGCGACTCC +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFLAARS*LLGRDS
Trigger: GGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAG...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR GCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTCAACTCTTCACATGCTaGGACTTCCACCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSQLFTC*DFHPAS
Trigger: TGATGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTG...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCAACTCTTCACATGCTaGGACTTCCACCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSQLFTC*DFHPAS
Trigger: TGATGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSTSCPL*AHPSTI
Trigger: GATTGTGGAAGGATGAGCCCACAATGGACAGGACGT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGGCTCCCATCCAGCCTaGTGGCTGAAGTCATCTACA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQGSHPA*WLKSST
Trigger: TGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATGTCCTTTTGTCTGTaGGCTCCCATCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEMSFCL*APIQPG
Trigger: ACCAGGCTGGATGGGAGCCCACAGACAAAAGGACAT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGTAGGAGGGCAGGAGTaGATGCAAGGACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQVGGQE*MQGQQT
Trigger: TGTCTGCTGTCCTTGCATCCACTCCTGCCCTCCTAC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACCCAGCCAAGTCTCCTaGAGACCACCGGAAATGAGT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRPSQVS*RPPEMS
Trigger: ACTCATTTCCGGTGGTCTCCAGGAGACTTGGCTGGG...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTCAGAGAGATCTCTGTaGCAGAATGTGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNSERSL*QNVLAG
Trigger: CCCAGCCAACACATTCTGCCACAGAGATCTCTCTGA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCGAGGTAGTCTGCTCTTaGGTTCCTGATTCATACACA +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIEVVCS*VPDSYT
Trigger: TGTGTATGAATCAGGAACTCAAGAGCAGACTACCTC...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCGTAGATGACACTTGGTaGGGTAGTCTGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFVDDTW*GSLLLS
Trigger: ACTCAAGAGCAGACTACCTCACCAAGTGTCATCTAC...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGGTAGATGACACTTGGTaGGGTAGTCTGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLVDDTW*GSLLLS
Trigger: ACTCAAGAGCAGACTACCTCACCAAGTGTCATCTAC...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGTAGATGACACTTGGTaGGGTAGTCTGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSVDDTW*GSLLLS
Trigger: ACTCAAGAGCAGACTACCTCACCAAGTGTCATCTAC...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSINFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQNFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFLLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGCTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLLLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRLAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSITQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEITQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGGGGCCTTGGAAAGTaGGTACTATCCACTCAGACT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRGGLGK*VLSTQT
Trigger: AGTCTGAGTGGATAGTACTCACTTTCCAAGGCCCCC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCTCCAGGCATCCACATaGAAGAACTCCACAATGTTC +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSLQAST*KNSTMF
Trigger: GAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATCCAGCCTGGTGGCTaGAGTCATCTACAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEIQPGG*SHLQVR
Trigger: TCTTACCTGTAGATGACTTCAGCCACCAGGCTGGAT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAACTCCCAACCTCAGGTaGTCCTCCGGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLTPNLR*SSGLGL
Trigger: GAGGCCAAGGCCGGAGGATCACCTGAGGTTGGGAGT...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACTTACTCTGGCCAGTaGGAGCACATTTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEITYSGQ*EHIFSL
Trigger: CAAAGAGAAAATGTGCTCTCACTGGCCAGAGTAAGT...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGCCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAGGCATGAGCCACAATaGCTAACTACTGATGCACGA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSRHEPQ*LTTDAR
Trigger: TCGTGCATCAGTAGTTAGGCATTGTGGCTCATGCCT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATTGCCCAGGCTGGAGTaGAATGGCGTGATGTCAACT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRLPRLE*NGVMST
Trigger: AGTTGACATCACGCCATTGCACTCCAGCCTGGGCAA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTTGCCCAGGCTGGAGTaGAATGGCGTGATGTCAACT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQLPRLE*NGVMST
Trigger: AGTTGACATCACGCCATTGCACTCCAGCCTGGGCAA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAGATGCAACCCTGGTaGCGAGATCTGCGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQKMQPW*RDLRKV
Trigger: CACTTTCCGCAGATCTCGGCACCAGGGTTGCATCTT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGGTACAGAGATTGTGTaGCTAGTATGGTGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEGTEIV*LVWCER
Trigger: CCTCTCGCACCATACTAGGCACACAATCTCTGTACC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCCGGTGTTGTGAGCTaGTTCCGACTTGTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSGVVS*FRLVRE
Trigger: TTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGCGACTCCGGGCGCCTaGCCGGAATTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSATPGA*PEFPTR
Trigger: CCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCAACTCTTCACATGCTaGGACTTCCACCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVQLFTC*DFHPAS
Trigger: TGATGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTG...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCCACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAETSCPL*AHPSTI
Trigger: GATTGTGGAAGGATGAGCCCACAATGGACAGGACGT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: LFSQLHNLPKHLINILLFRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCCCATCCAGCCTGGTaGCTGAAGTCATCTACAGGT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSHPAW*LKSSTG
Trigger: ACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGGAGACAATCCAGGATaGTGGGCCATAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQGDNPG*WAIEQT
Trigger: GGTTTGCTCTATGGCCCACCATCCTGGATTGTCTCC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGGAGGTAGTCTGCTCTTaGGTTCCTGATTCATACACA +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLEVVCS*VPDSYT
Trigger: TGTGTATGAATCAGGAACTCAAGAGCAGACTACCTC...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCGAGGTAGTCTGCTCTTaGGTTCCTGATTCATACACA +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFEVVCS*VPDSYT
Trigger: TGTGTATGAATCAGGAACTCAAGAGCAGACTACCTC...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGTAGATGACACTTGGTaGGGTAGTCTGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEVDDTW*GSLLLS
Trigger: ACTCAAGAGCAGACTACCTCACCAAGTGTCATCTAC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLNFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSNFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSNFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAELLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVLLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATATTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTTTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCCCTTTAAACCCCTTTaGCACACGTCAAACTCATTT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWPFKPL*HTSNSF
Trigger: AAATGAGTTTGACGTGTGTCAAAGGGGTTTAAAGGG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAATCCAGCCTGGTGGCTaGAGTCATCTACAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRIQPGG*SHLQVR
Trigger: TCTTACCTGTAGATGACTTCAGCCACCAGGCTGGAT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCCAGCCTGGTGGCTaGAGTCATCTACAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQIQPGG*SHLQVR
Trigger: TCTTACCTGTAGATGACTTCAGCCACCAGGCTGGAT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGAACTTGTGCTCCCTTaGGAAGCTGCCTTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQELVLP*EAAFRK
Trigger: CTTCCTAAAGGCAGCTTCTCAAGGGAGCACAAGTTC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCATCCAGAGCACTCCACTaGGAGCACAATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPSRALH*EHNPAA
Trigger: AGCAGCTGGATTGTGCTCTCAGTGGAGTGCTCTGGA...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGGCTGTAGTAAAGCCTaGAGCACGCGATGTAAAACA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEGCSKA*STRCKT
Trigger: TGTTTTACATCGCGTGCTTCAGGCTTTACTACAGCC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGGGTAGAAAATGGAACTaGAGAATCCCTGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLGRKWN*RIPESS
Trigger: GCTGCTTTCAGGGATTCTTCAGTTCCATTTTCTACC...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGACTTACTCTGGCCAGTaGGAGCACATTTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQTYSGQ*EHIFSL
Trigger: CAAAGAGAAAATGTGCTCTCACTGGCCAGAGTAAGT...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
CDS-3UTR GCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCCAAAAATATCATCACTaGCATCGCAAGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLQKYHH*HRKPLL
Trigger: TAACAGAGGCTTGCGATGGCAGTGATGATATTTTTG...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAATCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: MVPRRASEFLFEITQLCQSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCTCAGACTTCTTTCTTaGCTCTCACAAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSLRLLS*LSQGRK
Trigger: CTTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACGGCAACTCTTCACATaGTGCGACTTCCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPRQLFT*CDFHPA
Trigger: TGCTGGGTGGAAGTCGCAGCATGTGAAGAGTTGCCG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR CCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRTSCPL*AHPSTI
Trigger: GATTGTGGAAGGATGAGCCCACAATGGACAGGACGT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTTTACAGGACTTACTCTaGCCAGTGAGAGCACATTTT +
Preference number: 4 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPLQDLL*PVRAHF
Trigger: AAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAA...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417413.7
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTCGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTATCCCATCCAGCCTGGTaGCTGAAGTCATCTACAGGT +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLSHPAW*LKSSTG
Trigger: ACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGA...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAGGCTCCCATCCAGCCTaGTGGCTGAAGTCATCTACA +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPGSHPA*WLKSST
Trigger: TGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCC...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGCCCATCTGATCCCATaGCTAACTACTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEAHLIP*LTTPQI
Trigger: AATTTGGGGAGTAGTTAGCCATGGGATCAGATGGGC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAAAGCAATGGTTACTaGCTGGATGTAGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEQSNGY*LDVGSK
Trigger: CTTGCTCCCTACATCCAGCCAGTAACCATTGCTTTG...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAAGAGGTAGTCTGCTCTTaGGTTCCTGATTCATACACA +
Preference number: 4 (lower is better)
Translates to: MVPRRASEFLFEITQLCQEVVCS*VPDSYT
Trigger: TGTGTATGAATCAGGAACTCAAGAGCAGACTACCTC...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVNFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: FSYSGSSGMVPRRASEFLSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...GAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAETSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAETQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAGGGGGCCTTGGAAAGTaGGTACTATCCACTCAGACT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPGGLGK*VLSTQT
Trigger: AGTCTGAGTGGATAGTACTCACTTTCCAAGGCCCCC...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCCCTTTAAACCCCTTTaGCACACGTCAAACTCATTT +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSPFKPL*HTSNSF
Trigger: AAATGAGTTTGACGTGTGTCAAAGGGGTTTAAAGGG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACCCTAAGATTCAGACCTaGATTCTTTCCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNPKIQT*ILSFPL
Trigger: GAGAGGAAAGGAAAGAATTCAGGTCTGAATCTTAGG...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACAAAGTAAACTGTGTGTaGACTTGTGCTCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNKVNCV*TCAPLR
Trigger: TCTCAAGGGAGCACAAGTTCACACACAGTTTACTTT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTAATCTGGGGATGTGGTaGTGGGGGCCCTGTATCCCT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCNLGMW*WGPCIP
Trigger: AGGGATACAGGGCCCCCATCACCACATCCCCAGATT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGGTTTGCTTTGGTATTaGCATTTCCTAGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEGLLWY*HFLESS
Trigger: GGAGCTCTCTAGGAAATGTCAATACCAAAGCAAACC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAATTGGGGTTCCGAACTaGAATACTTCCAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLIGVPN*NTSKAQ
Trigger: CTGGGCCTTGGAAGTATTTCAGTTCGGAACCCCAAT...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATTCTCAGCAGCACAGTaGTGTGACAGGAAGCATCAT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRFSAAQ*CDRKHH
Trigger: ATGATGCTTCCTGTCACATCACTGTGCTGCTGAGAA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGAAACCTCCCGAGGGTaGCCTCTACGCCTCAGCACG +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSETSRG*PLRLST
Trigger: CGTGCTGAGGCGTAGAGGTCACCCTCGGGAGGTTTC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGGGCAAAAATGATAACTaGCACCTCAGTGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLGKNDN*HLSDEN
Trigger: GTTCTCATCACTGAGGTGTCAGTTATCATTTTTGCC...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGCTAGGACTCCCTTGCTaGCATAAAATTCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLLGLPC*HKILSE
Trigger: TTCAGAGAGAATTTTATGTCAGCAAGGGAGTCCTAG...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAGCCTCCAGAACAGCTaGAGCCAATTTTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAESLQNS*SQFLRM
Trigger: CATTCTCAAAAATTGGCTTCAGCTGTTCTGGAGGCT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378809.8
CDS-3UTR GCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATACAAAAATATCATCACTaGCATCGCAAGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIQKYHH*HRKPLL
Trigger: TAACAGAGGCTTGCGATGGCAGTGATGATATTTTTG...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATATTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEIFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCTACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTCTGCTAACCCTAAATaGCATGTCAGAGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSSANPK*HVRARR
Trigger: TCTTCTAGCTCTGACATGGCATTTAGGGTTAGCAGA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACAGCCCTCTTGTACACTaGTGCTGTGAATACAAATTG +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNSPLVH*CCEYKL
Trigger: CAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGCATGAGCCACAATaGCTAACTACTGATGCACGA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQRHEPQ*LTTDAR
Trigger: TCGTGCATCAGTAGTTAGGCATTGTGGCTCATGCCT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTTACAGGACTTACTCTaGCCAGTGAGAGCACATTTT +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSLQDLL*PVRAHF
Trigger: AAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000417413.7
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAACCTTCCCAGTTTTTaGGAGCCAAACCTAGACCAG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRNLPSF*EPNLDQ
Trigger: CTGGTCTAGGTTTGGCTCCCAAAAACTGGGAAGGTT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCTTGTTCTTCCAGTGTaGATGCTTAGTCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSLVLPV*MLSQRL
Trigger: CAGTCTTTGACTAAGCATCCACACTGGAAGAACAAG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATGTGGCAGAATGTGTTaGCTGGGGCAATATCCAAAG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRCGRMC*LGQYPK
Trigger: CTTTGGATATTGCCCCAGCCAACACATTCTGCCACA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CAA 72 bp CTCAGACGTTCCTCCAAAAGTAAACTGTGTGTGAACTaGTGCTCCCTTGAGAAGCTGCCTTTAGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LRRSSKSKLCVN*CSLEKLPLGRV
Trigger: AACCCTTCCTAAAGGCAGCTTCTCAAGGGAGCACAAGTTCACACACAGTTTACTTTTGGAGGAACGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGAGGTAGTCTGCTCTTaGGTTCCTGATTCATACACA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQEVVCS*VPDSYT
Trigger: TGTGTATGAATCAGGAACTCAAGAGCAGACTACCTC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAGGTAGTCTGCTCTTaGGTTCCTGATTCATACACA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRREVVCS*VPDSYT
Trigger: TGTGTATGAATCAGGAACTCAAGAGCAGACTACCTC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAGTAGATGACACTTGGTaGGGTAGTCTGCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLVDDTW*GSLLLS
Trigger: ACTCAAGAGCAGACTACCTCACCAAGTGTCATCTAC...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAELISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWSYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTTTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACCCAGCTTTGCCAATaGCATCTCTTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQTQLCQ*HLFSQL
Trigger: CAGTTGAGAAAAGAGATGTCATTGGCAAAGCTGGGT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGGTACGGAAAATCTTCTaGAGCTTTGATGGTACATAT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWVRKIF*SFDGTY
Trigger: ATATGTACCATCAAAGCTTCAGAAGATTTTCCGTAC...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAGTTACATACAGAAGTaGTTTTGGTCCTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAESYIQK*FWSSAF
Trigger: GAATGCGGAGGACCAAAATCACTTCTGTATGTAACT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTAGTTACATACAGAAGTaGTTTTGGTCCTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVSYIQK*FWSSAF
Trigger: GAATGCGGAGGACCAAAATCACTTCTGTATGTAACT...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGATAGTTGTAAGTGTCTaGATAACAGACTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLIVVSV*ITDWLN
Trigger: GTTCAGCCAGTCTGTTATTCAGACACTTACAACTAT...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCATGGAGAAAATGTCATaGATGGTCAAATGTCCCATA +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITMEKMS*MVKCPI
Trigger: TATGGGACATTTGACCATTCATGACATTTTCTCCAT...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526994.6
CDS-3UTR TCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGAGTTACATACAGAAGTaGTCTAGGCCAAATGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQSYIQK*SRPNGE
Trigger: TTCTCCATTTGGCCTAGATCACTTCTGTATGTAACT...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526994.6
CDS-3UTR GCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGCAAAAATATCATCACTaGCATCGCAAGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLQKYHH*HRKPLL
Trigger: TAACAGAGGCTTGCGATGGCAGTGATGATATTTTTG...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGTACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCATAAGTCAGCCTCTTTaGAGTCTTTTACAATTGGCT +
Preference number: 4 (lower is better)
Translates to: GSSGMVPRRASEFLFEITISQPL*SLLQLA
Trigger: AGCCAATTGTAAAAGACTGCAAAGAGGCTGACTTAT...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR GCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGATAAGTCAGCCTCTTTaGAGTCTTTTACAATTGGCT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWISQPL*SLLQLA
Trigger: AGCCAATTGTAAAAGACTGCAAAGAGGCTGACTTAT...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTATCCCACTGGTTCAATaGTTAGAGTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFIPLVQ*LEYCFP
Trigger: TGGAAAACAATACTCTAAGCATTGAACCAGTGGGAT...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR GCA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCATCCCACTGGTTCAATaGTTAGAGTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIIPLVQ*LEYCFP
Trigger: TGGAAAACAATACTCTAAGCATTGAACCAGTGGGAT...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR GCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGTTGATATCCCCATTTTaGAGAGTTTCGGTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWLISPF*RVSVEN
Trigger: ATTCTCTACCGAAACTCTGCAAAATGGGGATATCAA...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTATGGAGCCCACAAGATaGAACCCTGGTGCCGAGATC +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCMEPTR*NPGAEI
Trigger: GATCTCGGCACCAGGGTTGCATCTTGTGGGCTCCAT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATTGACAGTTTCTATCTaGTTGGGTGTGGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRLTVSI*LGVGHD
Trigger: ATCATGCCCCACACCCAAGCAGATAGAAACTGTCAA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAACCCTTCCCAGCCTCTaGTATCCTGTTGTATTCACT +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLTLPSL*YPVVFT
Trigger: AGTGAATACAACAGGATAGCAGAGGCTGGGAAGGGT...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAGGTACAGAGATTGTGTaGCTAGTATGGTGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPGTEIV*LVWCER
Trigger: CCTCTCGCACCATACTAGGCACACAATCTCTGTACC...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGTCTAATGCATTTGCCTaGATAGGTACAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWSNAFA*IGTEDK
Trigger: TTTATCCTCTGTACCTATCCAGGCAAATGCATTAGA...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATATCTAATGCATTTGCCTaGATAGGTACAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: SGSSGMVPRRASEFLFEISNAFA*IGTEDK
Trigger: TTTATCCTCTGTACCTATCCAGGCAAATGCATTAGA...TATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTTTACAGGACTTACTCTaGCCAGTGAGAGCACATTTT +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVLQDLL*PVRAHF
Trigger: AAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAA...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417413.7
ENST00000526994.6
ENST00000552199.5
CDS-3UTR CCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACGGGGAGTTCAGGCATaGTCCCACGCAGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSRGVQA*SHAEHQ
Trigger: CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTGGCTCCCATCCAGCCTaGTGGCTGAAGTCATCTACA +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCGSHPA*WLKSST
Trigger: TGTAGATGACTTCAGCCACCAGGCTGGATGGGAGCC...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTATGTCCTTTTGTCTGTaGGCTCCCATCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSMSFCL*APIQPG
Trigger: ACCAGGCTGGATGGGAGCCCACAGACAAAAGGACAT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTGTGCTGCAAGTAGCTaGTATTCATTCATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNCAASS*YSFILL
Trigger: CAGCAAAATGAATGAATACCAGCTACTTGCAGCACA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATGTGTGAAAACACAATaGAGCCCACAAGATGCAACC +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRCVKTQ*SPQDAT
Trigger: GGTTGCATCTTGTGGGCTCCATTGTGTTTTCACACA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAAAACATGTAGCCTCTaGCTAACCCTAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRKTCSL*LTLDSK
Trigger: CTTGGAGTCTAGGGTTAGCCAGAGGCTACATGTTTT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTGTAAAACAAAGCAATaGTTACTGGCTGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNCKTKQ*LLAGCR
Trigger: CCTACATCCAGCCAGTAACCATTGCTTTGTTTTACA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGCGAGTTGTCAACGCTaGGAGGGCAGAGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNASCQR*EGRAMQ
Trigger: TTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTTTAACTTCAGTTCCTaGAAAATCGGGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEFNFSS*KIGSLP
Trigger: TGGGAGTGACCCGATTTTCCAGGAACTGAAGTTAAA...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551641.5
3UTR CAA 72 bp CATAATCAGCATGCTGGTTCTTCCTTTTCTGTTGCCTaGCTCTTCCTAACAGCTCCTCCTTTCGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HNQHAGSSFSVA*LFLTAPPFVFA
Trigger: TGCAAAGACGAAAGGAGGAGCTGTTAGGAAGAGCAAGGCAACAGAAAAGGAAGAACCAGCATGCTGATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CAA 72 bp CAACCCCCATTACCCTTCCCAGCCTCTGCTATCCTGTaGTATTCACTACCTATAGTGGTAGATTCTGAATGT +
Preference number: 4 (lower is better)
Translates to: QPPLPFPASAIL*YSLPIVVDSEC
Trigger: ACATTCAGAATCTACCACTATAGGTAGTGAATACAACAGGATAGCAGAGGCTGGGAAGGGTAATGGGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCCATCATAAGATAACCTaGAGAACCCACCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFHHKIT*RTHRGR
Trigger: GCGGCCGCGGTGGGTTCTTCAGGTTATCTTATGATG...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000247833.12
CDS-3UTR TCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp CAGACTATCAGTACTCAACCCAAAAATATCATCACTGCCATCGCAAGCCTCTGTAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QTISTQPKNIITAIASLCNFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...ACAGAGGCTTGCGATGGCAGTGATGATATTTTTGGGTTGAGTACTGATAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR TCA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: SSRYSKVSQVENGTEESLSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPLLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR TCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCLAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSSYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000417413.7
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTCTATGTCCCTCCAATaGCAATATAGTGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQSMSLQ*QYSGQH
Trigger: GTGTTGACCACTATATTGTCATTGGAGGGACATAGA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGCCCTTTAAACCCCTTTaGCACACGTCAAACTCATTT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQPFKPL*HTSNSF
Trigger: AAATGAGTTTGACGTGTGTCAAAGGGGTTTAAAGGG...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACTCCAGGCATCCACATaGAAGAACTCCACAATGTTC +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPLQAST*KNSTMF
Trigger: GAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACGCTGTGAATACAAATTaGTTAACTTTTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNAVNTN*LTFLDG
Trigger: GCCATCCAGAAAAGTTAATCAATTTGTATTCACAGC...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTGCCCAAGTTGGACTTaGACCCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFCPSWT*TPGLKQ
Trigger: TTGCTTGAGCCCAGGGGTTCAAGTCCAACTTGGGCA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACACCCTCTCCAAAACTTaGCTTTGTGTTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNTLSKT*LCVSSF
Trigger: AAATGAAGAAACACAAAGTCAAGTTTTGGAGAGGGT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATACAGATAAAAGCTaGGCTGCTGCGGTTAAATCT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRDTDKS*AAAVKS
Trigger: AGATTTAACCGCAGCAGCTCAGCTTTTATCTGTATC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTTACATACAGAAGTaGTTTTGGTCCTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQSYIQK*FWSSAF
Trigger: GAATGCGGAGGACCAAAATCACTTCTGTATGTAACT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
CDS-3UTR GCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTTACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR GCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTACCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR GCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTCCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATAAGTCAGCCTCTTTaGAGTCTTTTACAATTGGCT +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSISQPL*SLLQLA
Trigger: AGCCAATTGTAAAAGACTGCAAAGAGGCTGACTTAT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCCCACTGGTTCAATaGTTAGAGTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSIPLVQ*LEYCFP
Trigger: TGGAAAACAATACTCTAAGCATTGAACCAGTGGGAT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACATCCCACTGGTTCAATaGTTAGAGTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNIPLVQ*LEYCFP
Trigger: TGGAAAACAATACTCTAAGCATTGAACCAGTGGGAT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCATCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: SSGMVPRRASEFLFEITQISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCTGCTAACCCTAAATaGCATGTCAGAGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSANPK*HVRARR
Trigger: TCTTCTAGCTCTGACATGGCATTTAGGGTTAGCAGA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCCTCTTGTACACTGCTaGTGTGAATACAAATTGATT +
Preference number: 4 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSPLVHC*CEYKLI
Trigger: AATCAATTTGTATTCACAGCAGCAGTGTACAAGAGG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAGCCCTCTTGTACACTaGTGCTGTGAATACAAATTG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSPLVH*CCEYKL
Trigger: CAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAGATCTGGGGGACCTGTaGAAGCATTTCTCAAGTATA +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLDLGDL*KHFSSI
Trigger: TATACTTGAGAAATGCTTGCACAGGTCCCCCAGATC...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCACTCACCACAACCTCTaGCTCCTGGGTTCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFTHHNL*LLGSSV
Trigger: AACGCTCGAACCCAGGAGGCAGAGGTTGTGGTGAGT...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAAGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: MVPRRASEFLFEITQLCQVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTTACAGGACTTACTCTaGCCAGTGAGAGCACATTTT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQLQDLL*PVRAHF
Trigger: AAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000417413.7
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCACAACCTCTGCCTCCTaGGTTCGAGCGTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFTTSAS*VRAFLL
Trigger: CAGGAGAAACGCTCGAACCCAGGAGGCAGAGGTTGT...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTCAGGCTGGAGTGCAATaGCGTGATGTCAACTCACCA +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCQAGVQ*RDVNSP
Trigger: TGGTGAGTTGACATCACGCCATTGCACTCCAGCCTG...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR TCA 90 bp ATGTTGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAACTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: MLENWTIQVSSMQLLQLELLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...TTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTTGGCTGTATCACACTaGGGTCCTGATGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNLAVSH*GPDDCH
Trigger: GTGGCAGTCATCAGGACCTCAGTGTGATACAGCCAA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTACCTAAGATTCAGACCTaGATTCTTTCCTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLPKIQT*ILSFPL
Trigger: GAGAGGAAAGGAAAGAATTCAGGTCTGAATCTTAGG...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTGGCGATGGGAGTAAGTaGAGACGTAACAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCGDGSK*RRNRLQ
Trigger: TTGCAACCTGTTACGTCTTCACTTACTCCCATCGCC...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGCAAAAATATCATCACTaGCATCGCAAGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQQKYHH*HRKPLL
Trigger: TAACAGAGGCTTGCGATGGCAGTGATGATATTTTTG...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATCCCACTGGTTCAATaGTTAGAGTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEIPLVQ*LEYCFP
Trigger: TGGAAAACAATACTCTAAGCATTGAACCAGTGGGAT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000552199.5
CDS-3UTR GCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCTCTTGTACACTGCTaGTGTGAATACAAATTGATT +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEPLVHC*CEYKLI
Trigger: AATCAATTTGTATTCACAGCAGCAGTGTACAAGAGG...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACGGTATTCATTCATTTTaGTGCCATGTAATAATCACC +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNGIHSF*CHVIIT
Trigger: GGTGATTATTACATGGCAGCAAAATGAATGAATACC...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACCCATCTCAATAAACTaGAATAGCTCAAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRPISIN*NSSSQK
Trigger: CTTTTGGCTTGAGCTATTGCAGTTTATTGAGATGGG...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATTTCTGTCTCTGTTATaGACATACCCAAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRFLSLL*TYPNFP
Trigger: GGGAAAGTTTGGGTATGTGCATAACAGAGACAGAAA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTGAACTCAGGGCTCAGTaGTGTACTTCATCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSELRAQ*CTSSPK
Trigger: CTTTGGAGATGAAGTACAGCACTGAGCCCTGAGTTC...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAACTCACCACAACCTCTaGCTCCTGGGTTCGAGCGTT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSTHHNL*LLGSSV
Trigger: AACGCTCGAACCCAGGAGGCAGAGGTTGTGGTGAGT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTCTGTGTGTGAACTTGTaGTCCCTTGAGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCLCVNL*SLEKLP
Trigger: AGGCAGCTTCTCAAGGGAGCACAAGTTCACACACAG...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGCTTTGCCAATCTAATGCATTTGCCTaGATAGGTACAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: MVPRRASEFLFEITQLCQSNAFA*IGTEDK
Trigger: TTTATCCTCTGTACCTATCCAGGCAAATGCATTAGA...TTGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAAGGTGTCTTTCCACCTaGCAAAGGCTCCTGCGTAGG +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSRCLST*QRLLRR
Trigger: CCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCTSCPL*AHPSTI
Trigger: GATTGTGGAAGGATGAGCCCACAATGGACAGGACGT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTCCCATCCAGCCTGGTaGCTGAAGTCATCTACAGGT +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNSHPAW*LKSSTG
Trigger: ACCTGTAGATGACTTCAGCCACCAGGCTGGATGGGA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATATGTCCTTTTGTCTGTaGGCTCCCATCCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNMSFCL*APIQPG
Trigger: ACCAGGCTGGATGGGAGCCCACAGACAAAAGGACAT...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCCCCGTCTCAAACTCCTaGGCTCAAGCAGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFPVSNS*AQAAQV
Trigger: TACTTGAGCTGCTTGAGCCCAGGAGTTTGAGACGGG...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACAATCTAGTTGTGATTTaGGTTTGCTTTGGTATTGAC +
Preference number: 4 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNNLVVI*VCFGID
Trigger: GTCAATACCAAAGCAAACCCAAATCACAACTAGATT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGAAATAGGATTTAAGTaGAAATTCCTCCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEEIGFK*KFLPLS
Trigger: ACTGAGAGGGAGGAATTTCCACTTAAATCCTATTTC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATCACAAGATGCAACCCTaGTGCCGAGATCTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNHKMQP*CRDLRK
Trigger: TTTCCGCAGATCTCGGCACCAGGGTTGCATCTTGTG...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAATGTGTGAAAACACAATaGAGCCCACAAGATGCAACC +
Preference number: 4 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQCVKTQ*SPQDAT
Trigger: GGTTGCATCTTGTGGGCTCCATTGTGTTTTCACACA...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTGACAATCCAGGATGGTaGGCCATAGAGCAAACCATG +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCDNPGW*AIEQTM
Trigger: CATGGTTTGCTCTATGGCCCACCATCCTGGATTGTC...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACCCAGCCAAGTCTCCTaGAGACCACCGGAAATGAGT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSPSQVS*RPPEMS
Trigger: ACTCATTTCCGGTGGTCTCCAGGAGACTTGGCTGGG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAAAAAACATGTAGCCTCTaGCTAACCCTAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQKTCSL*LTLDSK
Trigger: CTTGGAGTCTAGGGTTAGCCAGAGGCTACATGTTTT...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTCAGAGAGATCTCTGTaGCAGAATGTGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCSERSL*QNVLAG
Trigger: CCCAGCCAACACATTCTGCCACAGAGATCTCTCTGA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAACAGTTTCTATCTGCTTaGGTGTGGGGCATGATACAA +
Preference number: 4 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQQFLSA*VWGMIQ
Trigger: TTGTATCATGCCCCACACCCAAGCAGATAGAAACTG...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACAGTTTCTATCTGCTTaGGTGTGGGGCATGATACAA +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPQFLSA*VWGMIQ
Trigger: TTGTATCATGCCCCACACCCAAGCAGATAGAAACTG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCAAATCAGGGTAATTaGGGTATCCATCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSNQGN*GIHHLK
Trigger: TTTGAGGTGATGGATACCCCAATTACCCTGATTTGA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CAA 72 bp GATTTGTACATCCAATACCTGCTTAACATATCCACTTaGATGCTCAGTGGGCACCTCACACTTGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: DLYIQYLLNIST*MLSGHLTLDLS
Trigger: TGACAGATCAAGTGTGAGGTGCCCACTGAGCATCAAAGTGGATATGTTAAGCAGGTATTGGATGTACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTGTCCGGAGAAGTAGGTaGAGCAAGGTTTACTTCATG +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCVRRSR*SKVYFM
Trigger: CATGAAGTAAACCTTGCTTCACCTACTTCTCCGGAC...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAA +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSRLLRR*CWRTGQ
Trigger: TTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000417413.7
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQSYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000417413.7
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LFSQLHNLPKHLINILLFTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCATCTATGTCCCTCCAATaGCAATATAGTGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPSMSLQ*QYSGQH
Trigger: GTGTTGACCACTATATTGTCATTGGAGGGACATAGA...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGTACGGAAAATCTTCTaGAGCTTTGATGGTACATAT +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRVRKIF*SFDGTY
Trigger: ATATGTACCATCAAAGCTTCAGAAGATTTTCCGTAC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTTAACATATCCACTTTaGTGCTCAGTGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSLTYPL*CSVGTS
Trigger: TGAGGTGCCCACTGAGCATCAAAGTGGATATGTTAA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCGGCGATGGGAGTAAGTaGAGACGTAACAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFGDGSK*RRNRLQ
Trigger: TTGCAACCTGTTACGTCTTCACTTACTCCCATCGCC...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTGTGCAGGAGTTCAGGTaGAAGATGATAATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSVQEFR*KMIIAW
Trigger: CCAAGCTATTATCATCTTTCACCTGAACTCCTGCAC...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGAACTGAAGAATCCCTaGAAGCAGCCAGCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLELKNP*KQPALD
Trigger: ATCTAGAGCTGGCTGCTTTCAGGGATTCTTCAGTTC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACCTGGCAAAGGCTCCTaGGTAGGTGATGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSPGKGS*VGDVGE
Trigger: TTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATAAGTCAGCCTCTTTaGAGTCTTTTACAATTGGCT +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQISQPL*SLLQLA
Trigger: AGCCAATTGTAAAAGACTGCAAAGAGGCTGACTTAT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCCCACTGGTTCAATaGTTAGAGTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQIPLVQ*LEYCFP
Trigger: TGGAAAACAATACTCTAAGCATTGAACCAGTGGGAT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTCTCAGACTTCTTTCTTaGCTCTCACAAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSLRLLS*LSQGRK
Trigger: CTTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAG...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAAAGCCCTCTTGTACACTaGTGCTGTGAATACAAATTG +
Preference number: 4 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQSPLVH*CCEYKL
Trigger: CAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCT...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACCTGGTTCAGTCTTTTaGCTGTTTTTCTGTGACACT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPPGSVF*LFFCDT
Trigger: AGTGTCACAGAAAAACAGGCAAAAGACTGAACCAGG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTTCGTCTTTGCAGGCTaGTTCTCTGTCACAGGAACT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCFVFAG*FSVTGT
Trigger: AGTTCCTGTGACAGAGAAGCAGCCTGCAAAGACGAA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTCCTCCTTTCGTCTTTaGAGGCTGCTTCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFSSFRL*RLLLCH
Trigger: GTGACAGAGAAGCAGCCTGCAAAGACGAAAGGAGGA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTTGACAGTTTCTATCTaGTTGGGTGTGGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSLTVSI*LGVGHD
Trigger: ATCATGCCCCACACCCAAGCAGATAGAAACTGTCAA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATCTAATGCATTTGCCTaGATAGGTACAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRSNAFA*IGTEDK
Trigger: TTTATCCTCTGTACCTATCCAGGCAAATGCATTAGA...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CCA 90 bp CAGACTATCAGTACTCAACCCAAAAATATCATCACTGCCATCGCAAGCCTCTGTGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTISTQPKNIITAIASLCVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...ACAGAGGCTTGCGATGGCAGTGATGATATTTTTGGGTTGAGTACTGATAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNTSCPL*AHPSTI
Trigger: GATTGTGGAAGGATGAGCCCACAATGGACAGGACGT...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTATGTGCTGCAAGTAGCTaGTATTCATTCATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLCAASS*YSFILL
Trigger: CAGCAAAATGAATGAATACCAGCTACTTGCAGCACA...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTGCCCATCTGATCCCATaGCTAACTACTCCCCAAATT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCAHLIP*LTTPQI
Trigger: AATTTGGGGAGTAGTTAGCCATGGGATCAGATGGGC...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTAACCTTCCCAGTTTTTaGGAGCCAAACCTAGACCAG +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCNLPSF*EPNLDQ
Trigger: CTGGTCTAGGTTTGGCTCCCAAAAACTGGGAAGGTT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAACTTGTTCTTCCAGTGTaGATGCTTAGTCAAAGACTG +
Preference number: 4 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQLVLPV*MLSQRL
Trigger: CAGTCTTTGACTAAGCATCCACACTGGAAGAACAAG...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGACAATCCAGGATGGTaGGCCATAGAGCAAACCATG +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNDNPGW*AIEQTM
Trigger: CATGGTTTGCTCTATGGCCCACCATCCTGGATTGTC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGGAGACAATCCAGGATaGTGGGCCATAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSGDNPG*WAIEQT
Trigger: GGTTTGCTCTATGGCCCACCATCCTGGATTGTCTCC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAGCAGAATGTGTTGGCTaGGGCAATATCCAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPAECVG*GNIQSL
Trigger: TAAACTTTGGATATTGCCCCAGCCAACACATTCTGC...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAAGCAGAATGTGTTGGCTaGGGCAATATCCAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQAECVG*GNIQSL
Trigger: TAAACTTTGGATATTGCCCCAGCCAACACATTCTGC...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTGTGGCAGAATGTGTTaGCTGGGGCAATATCCAAAG +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCCGRMC*LGQYPK
Trigger: CTTTGGATATTGCCCCAGCCAACACATTCTGCCACA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTCTATCTGCTTGGGTGTaGGGCATGATACAATCCCAT +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCLSAWV*GMIQSH
Trigger: ATGGGATTGTATCATGCCCCACACCCAAGCAGATAG...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CAA 72 bp ACAGATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTaGGAAAGTGAGTACTATCCACTCAGACTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TDKNKAILEVGA*ESEYYPLRLLS
Trigger: AGAAAGAAGTCTGAGTGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CAA 72 bp ACCAGCCCTCTTGTACACTGCTGCTGTGAATACAAATaGATTAACTTTTCTGGATGGCAATCTAGCAATGCA +
Preference number: 4 (lower is better)
Translates to: TSPLVHCCCEYK*INFSGWQSSNA
Trigger: TGCATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAGCTGATACTAGATATTTCCGCACAATTTAAACGTCTGGGGGATGAATACACGTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: KLILDISAQFKRLGDEYTLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...CGTGTATTCATCCCCCAGACGTTTAAATTGTGCGGAAATATCTAGTATCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: LFSQLHNLPKHLINILLFLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TTGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAAGTAAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LENWTIQVSSMQLLQLEVNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...TACTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCCTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFLLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTCTATGTCCCTCCAATaGCAATATAGTGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSSMSLQ*QYSGQH
Trigger: GTGTTGACCACTATATTGTCATTGGAGGGACATAGA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCATCAATTTCACATTCTTaGGCTAGGCATGGTACTGAT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPSISHS*ARHGTD
Trigger: ATCAGTACCATGCCTAGCTCAAGAATGTGAAATTGA...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAAGTGGATATACCAATTaGTACCCCCATCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPSGYTN*YPHQQY
Trigger: ATATTGCTGATGGGGGTATCAATTGGTATATCCACT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTTAACATATCCACTTTaGTGCTCAGTGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCLTYPL*CSVGTS
Trigger: TGAGGTGCCCACTGAGCATCAAAGTGGATATGTTAA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCGAATGTAGGTCTAAGTaGCTCCCAATCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFECRSK*LPIQSC
Trigger: ACAGCTCTGGATTGGGAGTCACTTAGACCTACATTC...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTGTGCAGGAGTTCAGGTaGAAGATGATAATAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCVQEFR*KMIIAW
Trigger: CCAAGCTATTATCATCTTTCACCTGAACTCCTGCAC...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTAAAGTAAACTGTGTGTaGACTTGTGCTCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSKVNCV*TCAPLR
Trigger: TCTCAAGGGAGCACAAGTTCACACACAGTTTACTTT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAATTGGGGTTCCGAACTaGAATACTTCCAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSIGVPN*NTSKAQ
Trigger: CTGGGCCTTGGAAGTATTTCAGTTCGGAACCCCAAT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TGTTGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAAGTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: CWRTGQYKCLQCSYFSLKFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCATACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTCTGCTAACCCTAAATaGCATGTCAGAGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSSANPK*HVRARR
Trigger: TCTTCTAGCTCTGACATGGCATTTAGGGTTAGCAGA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTAGCCCTCTTGTACACTaGTGCTGTGAATACAAATTG +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSSPLVH*CCEYKL
Trigger: CAATTTGTATTCACAGCAGCAGTGTACAAGAGGGCT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTTCGTCTTTGCAGGCTaGTTCTCTGTCACAGGAACT +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNFVFAG*FSVTGT
Trigger: AGTTCCTGTGACAGAGAAGCAGCCTGCAAAGACGAA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATCCTCCTTTCGTCTTTaGAGGCTGCTTCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSSSFRL*RLLLCH
Trigger: GTGACAGAGAAGCAGCCTGCAAAGACGAAAGGAGGA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTATTCTTCCAGTGTGGATaGTTAGTCAAAGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLFFQCG*LVKDCK
Trigger: TTTACAGTCTTTGACTAAGCATCCACACTGGAAGAA...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTACACACTATAATCCACTaGCAAGTAATGATTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLHTIIH*QVMILD
Trigger: ATCCAGAATCATTACTTGGCAGTGGATTATAGTGTG...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp TTGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAAGTACACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: LENWTIQVSSMQLLQLEVHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...TACTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR CCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTCACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTTACAGGACTTACTCTaGCCAGTGAGAGCACATTTT +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSLQDLL*PVRAHF
Trigger: AAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAATCTAGTTGTGATTTaGGTTTGCTTTGGTATTGAC +
Preference number: 4 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQNLVVI*VCFGID
Trigger: GTCAATACCAAAGCAAACCCAAATCACAACTAGATT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATCAAAGCAATGGTTACTaGCTGGATGTAGGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNQSNGY*LDVGSK
Trigger: CTTGCTCCCTACATCCAGCCAGTAACCATTGCTTTG...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GATCTCGCACTTTTGAAAGCCTCTCACATTCTTCATCTTTTAACTTCAGTTCCCGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: DLALLKASHILHLLTSVPAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...GGGAACTGAAGTTAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCAACTTCAGTTCCCTCTaGGCTTTTGCGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFNFSSL*AFASSS
Trigger: AGAAGAACTCGCAAAAGCTCAGAGGGAACTGAAGTT...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTATTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACTGCTGTTGCCTGCTTaGTATTTGCTTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSLLLPA*YLLLSP
Trigger: TGGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp AAACGAGACAGACTATCAGTACTCAACCCAAAAATATCATCACTGCCATCGCAAGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KRDRLSVLNPKISSLPSQAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...TTGCGATGGCAGTGATGATATTTTTGGGTTGAGTACTGATAGTCTGTCTCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTTCACGAGTCCCTGCTaGATGTATCGAATGTATGTA +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCFTSPC*MYRMYV
Trigger: TACATACATTCGATACATTCAGCAGGGACTCGTGAA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTCTATGTCCCTCCAATaGCAATATAGTGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCSMSLQ*QYSGQH
Trigger: GTGTTGACCACTATATTGTCATTGGAGGGACATAGA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTCCCTTTAAACCCCTTTaGCACACGTCAAACTCATTT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCPFKPL*HTSNSF
Trigger: AAATGAGTTTGACGTGTGTCAAAGGGGTTTAAAGGG...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACTCCAGGCATCCACATaGAAGAACTCCACAATGTTC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSLQAST*KNSTMF
Trigger: GAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAGCTGTGAATACAAATTaGTTAACTTTTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPAVNTN*LTFLDG
Trigger: GCCATCCAGAAAAGTTAATCAATTTGTATTCACAGC...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTCAATTTCACATTCTTaGGCTAGGCATGGTACTGAT +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSSISHS*ARHGTD
Trigger: ATCAGTACCATGCCTAGCTCAAGAATGTGAAATTGA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTGATACAGATAAAAGCTaGGCTGCTGCGGTTAAATCT +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCDTDKS*AAAVKS
Trigger: AGATTTAACCGCAGCAGCTCAGCTTTTATCTGTATC...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGGCTGTAGTAAAGCCTaGAGCACGCGATGTAAAACA +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSGCSKA*STRCKT
Trigger: TGTTTTACATCGCGTGCTTCAGGCTTTACTACAGCC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp CCTGTCCAAGTTGATCTCGCACTTTTGAAAGCCTCTCACATTCTTCATCTTTTATACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PVQVDLALLKASHILHLLYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...TAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAACTTGGACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAATCCCACTGGTTCAATaGTTAGAGTATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPIPLVQ*LEYCFP
Trigger: TGGAAAACAATACTCTAAGCATTGAACCAGTGGGAT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATCCTCCGCATTCAACTaGAGAAGCTTTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSSSAFN*RSFHKP
Trigger: CGGTTTGTGAAAGCTTCTGCAGTTGAATGCGGAGGA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACCTCTTGTACACTGCTaGTGTGAATACAAATTGATT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPPLVHC*CEYKLI
Trigger: AATCAATTTGTATTCACAGCAGCAGTGTACAAGAGG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGATCTGGGGGACCTGTaGAAGCATTTCTCAAGTATA +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNDLGDL*KHFSSI
Trigger: TATACTTGAGAAATGCTTGCACAGGTCCCCCAGATC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAGGTATTCATTCATTTTaGTGCCATGTAATAATCACC +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLGIHSF*CHVIIT
Trigger: GGTGATTATTACATGGCAGCAAAATGAATGAATACC...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGAACTCAGGGCTCAGTaGTGTACTTCATCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSELRAQ*CTSSPK
Trigger: CTTTGGAGATGAAGTACAGCACTGAGCCCTGAGTTC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTACACAATTTAAACGTCTaGGGGATGAATACACGGGTT +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLHNLNV*GMNTRV
Trigger: AACCCGTGTATTCATCCCCCAGACGTTTAAATTGTG...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTTACAGGACTTACTCTaGCCAGTGAGAGCACATTTT +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCLQDLL*PVRAHF
Trigger: AAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAATTAACTTTTCTGGATaGCAATCTAGCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: TFPRELQQIQIKAELLRLINFSG*QSSNAD
Trigger: ATCTGCATTGCTAGATTGCCATCCAGAAAAGTTAAT...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACTATCTGCTTGGGTGTaGGGCATGATACAATCCCAT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSLSAWV*GMIQSH
Trigger: ATGGGATTGTATCATGCCCCACACCCAAGCAGATAG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTTAAAACATGAGCAATaGCTTGGAAGACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCLKHEQ*LGRQHR
Trigger: CCTGTGCTGTCTTCCAAGCCATTGCTCATGTTTTAA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGCTGGGTCTGTAACATaGAAGCTGATACTAGATATT +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLAGSVT*KLILDI
Trigger: AATATCTAGTATCAGCTTTCATGTTACAGACCCAGC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTTGATCTCGCACTTTTaGAAGCCTCTCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNLISHF*KPLTFF
Trigger: GAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: LFSQLHNLPKHLINILLFSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000378809.8
ENST00000417413.7
ENST00000552199.5
CDS-3UTR TCA 90 bp CCTGTCCAAGTTGATCTCGCACTTTTGAAAGCCTCTCACATTCTTCATCTTTTATCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: PVQVDLALLKASHILHLLSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...TAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAACTTGGACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR TCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR TCA 90 bp CTCTTTTCTCAACTGCATAACCTCCCAAAACATCTGATCAACATCCTGCTGTTTAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LFSQLHNLPKHLINILLFSYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...AAACAGCAGGATGTTGATCAGATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAACCTCCCAAAACATCTaGTCAACATCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSTSQNI*STSCCF
Trigger: GAAACAGCAGGATGTTGATCAGATGTTTTGGGAGGT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCATCAGAGTTCCTCTTTaGAATAACCCAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFIRVPL*NNPALP
Trigger: TGGCAAAGCTGGGTTATTTCAAAGAGGAACTCTGAT...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGGTTTGCTTTGGTATTaGCATTTCCTAGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSGLLWY*HFLESS
Trigger: GGAGCTCTCTAGGAAATGTCAATACCAAAGCAAACC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTATTCCTCCCTCTCAGTaGATAACAAATATGATGCGT +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCIPPSQ*ITNMMR
Trigger: ACGCATCATATTTGTTATTCACTGAGAGGGAGGAAT...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTATTCCTCCCTCTCAGTaGATAACAAATATGATGCGT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCIPPSQ*ITNMMR
Trigger: ACGCATCATATTTGTTATTCACTGAGAGGGAGGAAT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTATACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR GCA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTATAAGTCAGCCTCTTTaGAGTCTTTTACAATTGGCT +
Preference number: 4 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSISQPL*SLLQLA
Trigger: AGCCAATTGTAAAAGACTGCAAAGAGGCTGACTTAT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTAGTTTAAGAAGCTACTaGAAAATCCAGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCSLRSY*KIQVGC
Trigger: ACAGCCTACCTGGATTTTGCAGTAGCTTCTTAAACT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGTGATGTTGGAGAACTaGACAATACAAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLVMLEN*TIQVSS
Trigger: TGAAGACACTTGTATTGTCCAGTTCTCCAACATCAC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGCAGTCTTTTACAATTaGCTGTATCACACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNAVFYN*LYHTEV
Trigger: GACCTCAGTGTGATACAGCCAATTGTAAAAGACTGC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAATTAACTTTTCTGGATaGCAATCTAGCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: DKNKAILEVGALESEYYPINFSG*QSSNAD
Trigger: ATCTGCATTGCTAGATTGCCATCCAGAAAAGTTAAT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAAAAATTCATACTGCATTaGACTCTTTTAAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQKFILH*TLLSSV
Trigger: GACACTGCTTAAAAGAGTCCAATGCAGTATGAATTT...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTGAATTTGCTGATAACTaGAATGGGAGTGACAATGAC +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCEFADN*NGSDND
Trigger: GTCATTGTCACTCCCATTCCAGTTATCAGCAAATTC...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTGTAAAACAAAGCAATaGTTACTGGCTGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCCKTKQ*LLAGCR
Trigger: CCTACATCCAGCCAGTAACCATTGCTTTGTTTTACA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTTAAAACATGAGCAATaGCTTGGAAGACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNLKHEQ*LGRQHR
Trigger: CCTGTGCTGTCTTCCAAGCCATTGCTCATGTTTTAA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSNSCPS*SRTFES
Trigger: GCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTAGTTACATACAGAAGTaGTCCTGTATCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCSYIQK*SCICKK
Trigger: CTTTTTGCAGATACAGGATCACTTCTGTATGTAACT...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTCAATTTCACATTCTTaGGCTAGGCATGGTACTGAT +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNSISHS*ARHGTD
Trigger: ATCAGTACCATGCCTAGCTCAAGAATGTGAAATTGA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTGTACGGAAAATCTTCTaGAGCTTTGATGGTACATAT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCVRKIF*SFDGTY
Trigger: ATATGTACCATCAAAGCTTCAGAAGATTTTCCGTAC...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTGTACGGAAAATCTTCTaGAGCTTTGATGGTACATAT +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCVRKIF*SFDGTY
Trigger: ATATGTACCATCAAAGCTTCAGAAGATTTTCCGTAC...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTTTTCTGCTGTTGCCTaGTTGATATTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNFSAVA*LIFASL
Trigger: GAGAGAAGCAAATATCAAGCAGGCAACAGCAGAAAA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTACAAGTGTCTTCAATaGAGCTACTTCAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNYKCLQ*SYFSLK
Trigger: CTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACCTGGTTCAGTCTTTTaGCTGTTTTTCTGTGACACT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSPGSVF*LFFCDT
Trigger: AGTGTCACAGAAAAACAGGCAAAAGACTGAACCAGG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTGTCACATATGTCAATaGCTAAACAGCTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCCHICQ*LNSCSV
Trigger: AACTGAACAGCTGTTTAGGCATTGACATATGTGACA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCCCCATCTCAATAAACTaGAATAGCTCAAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFPISIN*NSSSQK
Trigger: CTTTTGGCTTGAGCTATTGCAGTTTATTGAGATGGG...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGATGAGTTACCTCTTTaGAGTCTTTTACAATTGGCT +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLDELPL*SLLQLA
Trigger: AGCCAATTGTAAAAGACTGCAAAGAGGTAACTCATC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CCA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTATCTAATGCATTTGCCTaGATAGGTACAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLSNAFA*IGTEDK
Trigger: TTTATCCTCTGTACCTATCCAGGCAAATGCATTAGA...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATTACAGGACTTACTCTaGCCAGTGAGAGCACATTTT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSLQDLL*PVRAHF
Trigger: AAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000417413.7
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGAATTTGCTGATAACTaGAATGGGAGTGACAATGAC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNEFADN*NGSDND
Trigger: GTCATTGTCACTCCCATTCCAGTTATCAGCAAATTC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTCAAATCAGGGTAATTaGGGTATCCATCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNSNQGN*GIHHLK
Trigger: TTTGAGGTGATGGATACCCCAATTACCCTGATTTGA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGCAGCTACTTCAGCTTaGAGTACATCAATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSAATSA*STSIFP
Trigger: AGGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGCTGTGAATACAAATTaGTTAACTTTTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNAVNTN*LTFLDG
Trigger: GCCATCCAGAAAAGTTAATCAATTTGTATTCACAGC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR TCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCACCCTCTCCAAAACTTaGCTTTGTGTTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFTLSKT*LCVSSF
Trigger: AAATGAAGAAACACAAAGTCAAGTTTTGGAGAGGGT...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACAAAAATATCATCACTaGCATCGCAAGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSQKYHH*HRKPLL
Trigger: TAACAGAGGCTTGCGATGGCAGTGATGATATTTTTG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000552199.5
CDS-3UTR GCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATCCTCTTGTACACTGCTaGTGTGAATACAAATTGATT +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNPLVHC*CEYKLI
Trigger: AATCAATTTGTATTCACAGCAGCAGTGTACAAGAGG...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTGTCACATATGTCAATaGCTAAACAGCTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFCHICQ*LNSCSV
Trigger: AACTGAACAGCTGTTTAGGCATTGACATATGTGACA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATTTCTGTCTCTGTTATaGACATACCCAAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSFLSLL*TYPNFP
Trigger: GGGAAAGTTTGGGTATGTGCATAACAGAGACAGAAA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTTGATATCCCCATTTTaGAGAGTTTCGGTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFLISPF*RVSVEN
Trigger: ATTCTCTACCGAAACTCTGCAAAATGGGGATATCAA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCCACACTATAATCCACTaGCAAGTAATGATTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFHTIIH*QVMILD
Trigger: ATCCAGAATCATTACTTGGCAGTGGATTATAGTGTG...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAAGTTTAAGAAGCTACTaGAAAATCCAGGTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSSLRSY*KIQVGC
Trigger: ACAGCCTACCTGGATTTTGCAGTAGCTTCTTAAACT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTGTATTTACCCTATTGTaGTACCAAACAACAGATCAT +
Preference number: 4 (lower is better)
Translates to: TILSPGIHMKELHNVQKCVFTLL*YQTTDH
Trigger: ATGATCTGTTGTTTGGTAGCACAATAGGGTAAATAC...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGAAATAGGATTTAAGTaGAAATTCCTCCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNEIGFK*KFLPLS
Trigger: ACTGAGAGGGAGGAATTTCCACTTAAATCCTATTTC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATCTCTCACCATTTTATaGGCTTCCTCAAATAGACTA +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSSLTIL*ASSNRL
Trigger: TAGTCTATTTGAGGAAGCTCATAAAATGGTGAGAGA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR TCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGCTGTGAATACAAATTaGTTAACTTTTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSAVNTN*LTFLDG
Trigger: GCCATCCAGAAAAGTTAATCAATTTGTATTCACAGC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAATAAGTCAGCCTCTTTaGAGTCTTTTACAATTGGCT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSISQPL*SLLQLA
Trigger: AGCCAATTGTAAAAGACTGCAAAGAGGCTGACTTAT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAATCTCTTTTCTCAACTaGATAACCTCCCAAAACATC +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSISFLN*ITSQNI
Trigger: GATGTTTTGGGAGGTTATGCAGTTGAGAAAAGAGAT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR GCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATTCTTCCAGTGTGGATaGTTAGTCAAAGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSFFQCG*LVKDCK
Trigger: TTTACAGTCTTTGACTAAGCATCCACACTGGAAGAA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR GCA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCGTATTTACCCTATTGTaGTACCAAACAACAGATCAT +
Preference number: 4 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFVFTLL*YQTTDH
Trigger: ATGATCTGTTGTTTGGTAGCACAATAGGGTAAATAC...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATATTAACTTTTCTGGATaGCAATCTAGCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNINFSG*QSSNAD
Trigger: ATCTGCATTGCTAGATTGCCATCCAGAAAAGTTAAT...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
3UTR CAA 72 bp TGGGGTATCCATCACCTCAAACATTTATCATTTGTGTaGAGAACATTCCAAATCCACTCCTTTATTGTGAAA +
Preference number: 4 (lower is better)
Translates to: WGIHHLKHLSFV*RTFQIHSFIVK
Trigger: TTTCACAATAAAGGAGTGGATTTGGAATGTTCTCAACACAAATGATAAATGTTTGAGGTGATGGATACCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
3UTR CAA 72 bp AAATTTTCTCCTGGACTGACCTTACTGAATTTAGATTaGTACATCCAATACCTGCTTAACATATCCACTTTG +
Preference number: 4 (lower is better)
Translates to: KFSPGLTLLNLD*YIQYLLNISTL
Trigger: CAAAGTGGATATGTTAAGCAGGTATTGGATGTACAAATCTAAATTCAGTAAGGTCAGTCCAGGAGAAAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CCA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAATTAACTTTTCTGGATaGCAATCTAGCAATGCAGAT +
Preference number: 4 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSINFSG*QSSNAD
Trigger: ATCTGCATTGCTAGATTGCCATCCAGAAAAGTTAAT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS GCA 90 bp GTCTGGCGGCACGGAGCTGCCTACTTGGGCGCGACTCCGGGCGCCTaGCCGGAATTTCCCACCAGGTTTCACCGAAACCTCCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VWRHGAAYLGATPGA*PEFPTRFHRNLPRV
Trigger: CACCCTCGGGAGGTTTCGGTGAAACCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CCA 90 bp CAATCCCACCCGTGCAGTTCGTCTCAACTCCCCCGAACACAAGTCTaGCGGCACGGAGCTGCCTACTTGGGCGCGACTCCGGGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: QSHPCSSSQLPRTQV*RHGAAYLGATPGAC
Trigger: GCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAGACGAACTGCACGGGTGGGATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 90 bp CAGTTCGTCTCAACTCCCCCGAACACAAGTCTGGCGGCACGGAGCTaGCTACTTGGGCGCGACTCCGGGCGCCTGCCCGGAATTTCCCAC +
Preference number: 5 (lower is better)
Translates to: QFVSTPPNTSLAARS*LLGRDSGRLPGISH
Trigger: GTGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAGACGAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CCA 90 bp CTCAACTCCCCCGAACACAAGTCTGGCGGCACGGAGCTGCCTACTTaGGCGCGACTCCGGGCGCCTGCCCGGAATTTCCCACCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: LNSPEHKSGGTELPT*ARLRAPARNFPPGF
Trigger: GAAACCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 90 bp CCTGGGCGGTCGGGGCGAGTTGTCAACGCTGGGAGGGCAGAGCCATaGAATCCCACCCGTGCAGTTCGTCTCAACTCCCCCGAACACAAG +
Preference number: 5 (lower is better)
Translates to: PGRSGRVVNAGRAEP*NPTRAVRLNSPEHK
Trigger: CTTGTGTTCGGGGGAGTTGAGACGAACTGCACGGGTGGGATTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGCCCCGACCGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 90 bp ACCCCAGGTCCACAGCCCTGCCGCGCGGCGTCCGGTGTTGTGAGCTaGTTCCGACTTGTTCGGGAACTCTCTCTTCATCCTCTTCGCGAC +
Preference number: 5 (lower is better)
Translates to: TPGPQPCRAASGVVS*FRLVRELSLHPLRD
Trigger: GTCGCGAAGAGGATGAAGAGAGAGTTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 90 bp AGTTTCCTAAGACTGGGACACGAAACCACCCCAGGTCCACAGCCCTaGCGCGCGGCGTCCGGTGTTGTGAGCTGCTTCCGACTTGTTCGG +
Preference number: 5 (lower is better)
Translates to: SFLRLGHETTPGPQP*RAASGVVSCFRLVR
Trigger: CCGAACAAGTCGGAAGCAGCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGGGGTGGTTTCGTGTCCCAGTCTTAGGAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 90 bp GCGAGTTGTCAACGCTGGGAGGGCAGAGCCATGCAATCCCACCCGTaGAGTTCGTCTCAACTCCCCCGAACACAAGTCTGGCGGCACGGA +
Preference number: 5 (lower is better)
Translates to: ASCQRWEGRAMQSHP*SSSQLPRTQVWRHG
Trigger: TCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAGACGAACTGCACGGGTGGGATTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS TCA 90 bp AAACCACCCCAGGTCCACAGCCCTGCCGCGCGGCGTCCGGTGTTGTaGGCTGCTTCCGACTTGTTCGGGAACTCTCTCTTCATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KPPQVHSPAARRPVL*AASDLFGNSLFILF
Trigger: GAAGAGGATGAAGAGAGAGTTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGGGGTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CAA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTCACGGAGCTGCCTACTaGGGCGCGACTCCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFHGAAY*GATPGA
Trigger: GGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTG...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CAA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGCACGGAGCTGCCTACTaGGGCGCGACTCCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQHGAAY*GATPGA
Trigger: GGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTG...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CAA 90 bp GGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCACGGAGCTGCCTACTaGGGCGCGACTCCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GSSGMVPRRASEFLFEITHGAAY*GATPGA
Trigger: GGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTG...GGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS GCA 90 bp GTTTCACCGAAACCTCCCGAGGGTGACCTCTACGCCTCAGCACGGTaGCTCGCGCGTAGTTTCCTAAGACTGGGACACGAAACCACCCCA +
Preference number: 5 (lower is better)
Translates to: VSPKPPEGDLYASAR*LARSFLRLGHETTP
Trigger: TGGGGTGGTTTCGTGTCCCAGTCTTAGGAAACTACGCGCGAGGCACCGTGCTGAGGCGTAGAGGTCACCCTCGGGAGGTTTCGGTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CAA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGGGCGGTCGGGGCGAGTaGTCAACGCTGGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SSGMVPRRASEFLFEITQGGRGE*STLGGQ
Trigger: CTGCCCTCCCAGCGTTGACAACTCGCCCCGACCGCC...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000552199.5
CDS-3UTR CAA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCGGCGGTCGGGGCGAGTaGTCAACGCTGGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSGGRGE*STLGGQ
Trigger: CTGCCCTCCCAGCGTTGACAACTCGCCCCGACCGCC...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGGCGGTCGGGGCGAGTaGTCAACGCTGGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEGGRGE*STLGGQ
Trigger: CTGCCCTCCCAGCGTTGACAACTCGCCCCGACCGCC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CAA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGGCGGTCGGGGCGAGTaGTCAACGCTGGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQGGRGE*STLGGQ
Trigger: CTGCCCTCCCAGCGTTGACAACTCGCCCCGACCGCC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS-3UTR CAA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGACACGTCCTGTCCATaGTGGGCTCATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFDTSCP*WAHPST
Trigger: TGTGGAAGGATGAGCCCACAATGGACAGGACGTGTC...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CAA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCGACACGTCCTGTCCATaGTGGGCTCATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFDTSCP*WAHPST
Trigger: TGTGGAAGGATGAGCCCACAATGGACAGGACGTGTC...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CAA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGGACACGTCCTGTCCATaGTGGGCTCATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: SSGMVPRRASEFLFEITQDTSCP*WAHPST
Trigger: TGTGGAAGGATGAGCCCACAATGGACAGGACGTGTC...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CAA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACCCTATGTTGCCCAAGTaGGACTTGAACCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNPMLPK*DLNPWA
Trigger: AGCCCAGGGGTTCAAGTCCAACTTGGGCAACATAGG...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCCACGGAGCTGCCTACTaGGGCGCGACTCCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFHGAAY*GATPGA
Trigger: GGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTG...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550536.5
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGACACGTCCTGTCCATaGTGGGCTCATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEDTSCP*WAHPST
Trigger: TGTGGAAGGATGAGCCCACAATGGACAGGACGTGTC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTTCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp TTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTTCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: FQLFGEFRHGPTQSIRVPSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...AGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGACACGTCCTGTCCATaGTGGGCTCATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRDTSCP*WAHPST
Trigger: TGTGGAAGGATGAGCCCACAATGGACAGGACGTGTC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACCTATGTTGCCCAAGTaGGACTTGAACCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRPMLPK*DLNPWA
Trigger: AGCCCAGGGGTTCAAGTCCAACTTGGGCAACATAGG...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TCCAGCAGGTACTCCAAGGTCAGCCAGGTAGAAAATGGAACTGAAGAATCCCTGCAGAGGGGACAGTCCTaGATGAGTTACCTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SSRYSKVSQVENGTEESLQRGQS*MSYLFA
Trigger: TGCAAAGAGGTAACTCATCAAGGACTGTCCCCTCTG...CAGGGATTCTTCAGTTCCATTTTCTACCTGGCTGACCTTGGAGTACCTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CAA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTATTGCCCAAGTTGGACTaGAACCCCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: TFPRELQQIQIKAELLRLLPKLD*NPWAQA
Trigger: TGCTTGAGCCCAGGGGTTCAAGTCCAACTTGGGCAA...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCTTAACATATCCACTTaGATGCTCAGTGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSLNIST*MLSGHL
Trigger: GAGGTGCCCACTGAGCATCAAAGTGGATATGTTAAG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTGTGGCAGAATGTGTaGGCTGGGGCAATATCCAAA +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAELWQNV*AGAISK
Trigger: TTTGGATATTGCCCCAGCCAACACATTCTGCCACAG...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACACAGTTTCTATCTGCTaGGGTGTGGGGCATGATACA +
Preference number: 5 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNTVSIC*GVGHDT
Trigger: TGTATCATGCCCCACACCCAAGCAGATAGAAACTGT...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCCATACAGAAGTGATTTaGGTCCTCCGCATTCAACTG +
Preference number: 5 (lower is better)
Translates to: SAIFQLFGEFRHGPTQSIHTEVI*VLRIQL
Trigger: CAGTTGAATGCGGAGGACCAAAATCACTTCTGTATG...GATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
CDS CCA 90 bp ACTTTTGAAAGCCTCTCACATTCTTCATCTTTTAACTTCAGTTCCTaGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGC +
Preference number: 5 (lower is better)
Translates to: TFESLSHSSSFNFSS*LRGSYAHGISLIAS
Trigger: GCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGAACTGAAGTTAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553099.5
CDS-3UTR CAA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGGTTGATCTCGCACTTTaGAAAGCCTCTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQVDLAL*KASHIL
Trigger: AAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAAC...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAAGACACGTCCTGTCCATaGTGGGCTCATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQDTSCP*WAHPST
Trigger: TGTGGAAGGATGAGCCCACAATGGACAGGACGTGTC...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCCATCTACAGGTAAGATaGACCAAACCTCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSHLQVR*TKPLNR
Trigger: CCTGTTCAGAGGTTTGGTCAATCTTACCTGTAGATG...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGCTTGATATCCCCATTTaGCAGAGTTTCGGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWLDIPI*QSFGRE
Trigger: TTCTCTACCGAAACTCTGCAAAATGGGGATATCAAG...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTGTGGGTCCCTTAGCCTaGGTGTCAGGGAGACAATCC +
Preference number: 5 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSVGPLA*VSGRQS
Trigger: GGATTGTCTCCCTGACACCAAGGCTAAGGGACCCAC...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAACATGAGCAATGGCTaGGAAGACAGCACAGGTACA +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAENMSNG*EDSTGT
Trigger: TGTACCTGTGCTGTCTTCCAAGCCATTGCTCATGTT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTCATACAGAAGTGATTTaGGTCCTCCGCATTCAACTG +
Preference number: 5 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSHTEVI*VLRIQL
Trigger: CAGTTGAATGCGGAGGACCAAAATCACTTCTGTATG...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
CDS CCA 90 bp ACACCAAGAAGGTCCGGAGAAGTAGGTGAAGCAAGGTTTACTTCATaGAAGCCTTCCAAGGGATCATTAGCCATAGCAAAAGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: TPRRSGEVGEARFTS*KPSKGSLAIAKASS
Trigger: TGATGAGGCTTTTGCTATGGCTAATGATCCCTTGGAAGGCTTCCATGAAGTAAACCTTGCTTCACCTACTTCTCCGGACCTTCTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000378815.10
ENST00000417413.7
ENST00000483530.6
ENST00000549760.1
ENST00000550536.5
ENST00000552199.5
CDS CCA 90 bp TTGCCAAGAAGGTCCGGAGAAGTAGGTGAAGCAAGGTTTACTTCATaGAAGCCTTCCAAGGGATCATTAGCCATAGCAAAAGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: LPRRSGEVGEARFTS*KPSKGSLAIAKASS
Trigger: TGATGAGGCTTTTGCTATGGCTAATGATCCCTTGGAAGGCTTCCATGAAGTAAACCTTGCTTCACCTACTTCTCCGGACCTTCTTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR CAA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTGTTGATCTCGCACTTTaGAAAGCCTCTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSVDLAL*KASHIL
Trigger: AAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAAC...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp TTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCGTTGATCTCGCACTTTaGAAAGCCTCTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: FFSYSGSSGMVPRRASEFVDLAL*KASHIL
Trigger: AAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAAC...GAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGTCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CAA 90 bp AGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: SHFSVIRGVQAWSHAEHQCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...CTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: HFSVIRGVQAWSHAEHQSDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...ACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CAA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: SSGMVPRRASEFLFEITQDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGACTCAGACTTCTTTCTaGCCTCTCACAAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAETQTSF*PLTRKE
Trigger: TTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAACTGTGTGTGAACTaGTGCTCCCTTGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQKLCVN*CSLEKL
Trigger: CAGCTTCTCAAGGGAGCACAAGTTCACACACAGTTT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAAACATGAGCAATGGCTaGGAAGACAGCACAGGTACA +
Preference number: 5 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRNMSNG*EDSTGT
Trigger: TGTACCTGTGCTGTCTTCCAAGCCATTGCTCATGTT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp AGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAGCACATTTTCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: SYSGSSGMVPRRASEFLFEHIFS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGAAAATGTGCTC...AAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
CDS TCA 90 bp CTTTTTAAAAGGTGTCTTTCCACCTGGCAAAGGCTCCTGCGTAGGTaGTGTTGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: LFKRCLSTWQRLLRR*CWRTGQYKCLQCSY
Trigger: GTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAACATCACCTACGCAGGAGCCTTTGCCAGGTGGAAAGACACCTTTTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000378815.10
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000550647.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CAA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CAA 90 bp AGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTCCTCTTTGAAATAACCCAGTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: SSGMVPRRASEFLFEITQCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...CTGGGTTATTTCAAAGAGGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp TCAGCTCCACCCAAGTGTTGTCATTCAAGACTGTGGGCTCAGTGTTGTCGAAACTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: SAPPKCCHSRLWAQCCRNCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...GTTTCGACAACACTGAGCCCACAGTCTTGAATGACAACACTTGGGTGGAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
CDS-3UTR CAA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAACTCAGACTTCTTTCTaGCCTCTCACAAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRTQTSF*PLTRKE
Trigger: TTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGT...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp ACCATAACATACACCAATGTCCTTTTGTCTGTGGGCTCCCATCCAGCCTGGTGGAGTCAGTTTTACAATTaGGAATGCAGAGATCAAGTG +
Preference number: 5 (lower is better)
Translates to: TITYTNVLLSVGSHPAWWSQFYN*ECRDQV
Trigger: CACTTGATCTCTGCATTCCAAATTGTAAAACTGACT...CCACCAGGCTGGATGGGAGCCCACAGACAAAAGGACATTGGTGTATGTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTTGCCCAAGTTGGACTaGAACCCCTGGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: TILSPGIHMKELHNVQKCLPKLD*NPWAQA
Trigger: TGCTTGAGCCCAGGGGTTCAAGTCCAACTTGGGCAA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGGTTTGCTTTGGTATaGACATTTCCTAGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRGFALV*TFPREL
Trigger: GAGCTCTCTAGGAAATGTCAATACCAAAGCAAACCC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCTTGATATCCCCATTTaGCAGAGTTTCGGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAELDIPI*QSFGRE
Trigger: TTCTCTACCGAAACTCTGCAAAATGGGGATATCAAG...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAGGACAAATAGCACATaGTGTGAAAACACAATGGAG +
Preference number: 5 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSRTNST*CENTME
Trigger: CTCCATTGTGTTTTCACACAATGTGCTATTTGTCCT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCGTGGGTCCCTTAGCCTaGGTGTCAGGGAGACAATCC +
Preference number: 5 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFVGPLA*VSGRQS
Trigger: GGATTGTCTCCCTGACACCAAGGCTAAGGGACCCAC...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGACATACAGAAGTGATTTaGGTCCTCCGCATTCAACTG +
Preference number: 5 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRHTEVI*VLRIQL
Trigger: CAGTTGAATGCGGAGGACCAAAATCACTTCTGTATG...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
CDS-3UTR CAA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGTTGATCTCGCACTTTaGAAAGCCTCTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQVDLAL*KASHIL
Trigger: AAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAAC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CAA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAATCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCATCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: DKNKAILEVGALESEYYPSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp ATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCATCAGAGTTTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: IFQLFGEFRHGPTQSIRVCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...AACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000417413.7
ENST00000483530.6
ENST00000552199.5
CDS-3UTR CAA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp AATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: NIQPFFSYSGSSGMVPRRDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...TCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTAACTCAGACTTCTTTCTaGCCTCTCACAAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: TFPRELQQIQIKAELLRLTQTSF*PLTRKE
Trigger: TTCCTTCCTTGTGAGAGGCAAGAAAGAAGTCTGAGT...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGCAGTCAGTTTTACAATTaGGAATGCAGAGATCAAGTG +
Preference number: 5 (lower is better)
Translates to: YSAIFQLFGEFRHGPTQSSQFYN*ECRDQV
Trigger: CACTTGATCTCTGCATTCCAAATTGTAAAACTGACT...GCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACTTAACATATCCACTTaGATGCTCAGTGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: DKNKAILEVGALESEYYPLNIST*MLSGHL
Trigger: GAGGTGCCCACTGAGCATCAAAGTGGATATGTTAAG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGGAGCACATTTTCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAEEHIFS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGAAAATGTGCTC...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
CDS GCA 90 bp CATGTATGTCCCATCTTGGAACAAATTTACAAATCAGTAATCAGCTaGAGGACAGCTCTCAGCTTTCCATCAGGATTTCAGCTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: HVCPILEQIYKSVIS*RTALSFPSGFQLLS
Trigger: GCTGAGAAGCTGAAATCCTGATGGAAAGCTGAGAGCTGTCCTGCAGCTGATTACTGATTTGTAAATTTGTTCCAAGATGGGACATACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481897.1
CDS-3UTR CAA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGACACGTCCTGTCCATaGTGGGCTCATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSDTSCP*WAHPST
Trigger: TGTGGAAGGATGAGCCCACAATGGACAGGACGTGTC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCACATCTACAGGTAAGATaGACCAAACCTCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: DKNKAILEVGALESEYYPHLQVR*TKPLNR
Trigger: CCTGTTCAGAGGTTTGGTCAATCTTACCTGTAGATG...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp ATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGAGAACCCTCTCCAAAACTaGACTTTGTGTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: IFSHFSVIRGVQAWSHAENPLQN*TLCFFI
Trigger: AATGAAGAAACACAAAGTCAAGTTTTGGAGAGGGTT...CTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTTGCTCAAGCTGGTCTaGAACTCTTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCLLKLV*NSWAQV
Trigger: CACTTGAGCCCAAGAGTTCAAGACCAGCTTGAGCAA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTGACTTACTCATAGATTaGCTCCTCCTCTACCTCTCC +
Preference number: 5 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSDLLID*LLLYLS
Trigger: GGAGAGGTAGAGGAGGAGCAAATCTATGAGTAAGTC...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp ACATTTCCTAGAGAGCTCCAACAGATACAGATAAAAGCTGAGCTGCTGCGGTTATCTACGTTGCCCAGGTaGGAATATAGTAGCTATTCA +
Preference number: 5 (lower is better)
Translates to: TFPRELQQIQIKAELLRLSTLPR*EYSSYS
Trigger: TGAATAGCTACTATATTCCAACCTGGGCAACGTAGA...TAACCGCAGCAGCTCAGCTTTTATCTGTATCTGTTGGAGCTCTCTAGGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp AAATATTCAGCCATTTTTCAGTTATTCGGGGAGTTCAGGCATGGTCCCACGCAGATAAGCCCCAGAATTTaGCTTAAGCAACTGAGAGTT +
Preference number: 5 (lower is better)
Translates to: KYSAIFQLFGEFRHGPTQISPRI*LKQLRV
Trigger: AACTCTCAGTTGCTTAAGCAAAATTCTGGGGCTTAT...CTGCGTGGGACCATGCCTGAACTCCCCGAATAACTGAAAAATGGCTGAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTAAACTGTGTGTGAACTaGTGCTCCCTTGAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSKLCVN*CSLEKL
Trigger: CAGCTTCTCAAGGGAGCACAAGTTCACACACAGTTT...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTCTGTGGCAGAATGTGTaGGCTGGGGCAATATCCAAA +
Preference number: 5 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCLWQNV*AGAISK
Trigger: TTTGGATATTGCCCCAGCCAACACATTCTGCCACAG...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS TCA 90 bp TGCAGGACAGCTCTCAGCTTTCCATCAGGATTTCAGCTTCTCAGCTaGAAATATCCTCATGATGACTGTTCAAGTCTCAAAGCATGTTAT +
Preference number: 5 (lower is better)
Translates to: CRTALSFPSGFQLLS*KYPHDDCSSLKACY
Trigger: ATAACATGCTTTGAGACTTGAACAGTCATCATGAGGATATTTTCAGCTGAGAAGCTGAAATCCTGATGGAAAGCTGAGAGCTGTCCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481897.1
CDS CCA 90 bp CTTCCTGGTAGATTTTGTCTAAGAAAGGACACGTCCTGTCCATTGTaGGCTCATCCTTCCACAATCGGAATTCATTATACAAGGATAAGT +
Preference number: 5 (lower is better)
Translates to: LPGRFCLRKDTSCPL*AHPSTIGIHYTRIS
Trigger: ACTTATCCTTGTATAATGAATTCCGATTGTGGAAGGATGAGCCCACAATGGACAGGACGTGTCCTTTCTTAGACAAAATCTACCAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000483530.6
ENST00000526994.6
ENST00000550536.5
ENST00000550647.5
ENST00000550847.1
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTATCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CAA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATTTGCTCAAGCTGGTCTaGAACTCTTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNLLKLV*NSWAQV
Trigger: CACTTGAGCCCAAGAGTTCAAGACCAGCTTGAGCAA...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTGTGGGCACCTCACACTaGATCTGTCAAACACTGAAT +
Preference number: 5 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCVGTSH*ICQTLN
Trigger: ATTCAGTGTTTGACAGATCAAGTGTGAGGTGCCCAC...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CAAGTTGATCTCGCACTTTTGAAAGCCTCTCACATTCTTCATCTTTTAACTTCATCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: QVDLALLKASHILHLLTSSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...TGAAGTTAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR CAA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCGACTTACTCATAGATTaGCTCCTCCTCTACCTCTCC +
Preference number: 5 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFDLLID*LLLYLS
Trigger: GGAGAGGTAGAGGAGGAGCAAATCTATGAGTAAGTC...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCGTGGGCACCTCACACTaGATCTGTCAAACACTGAAT +
Preference number: 5 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFVGTSH*ICQTLN
Trigger: ATTCAGTGTTTGACAGATCAAGTGTGAGGTGCCCAC...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAATAAGCCCCAGAATTTaGCTTAAGCAACTGAGAGTT +
Preference number: 5 (lower is better)
Translates to: DKNKAILEVGALESEYYPISPRI*LKQLRV
Trigger: AACTCTCAGTTGCTTAAGCAAAATTCTGGGGCTTAT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAAAAGCTAAGGTTAGAATaGGGGTTCCGAACTGAAATA +
Preference number: 5 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQKLRLE*GFRTEI
Trigger: TATTTCAGTTCGGAACCCCAATTCTAACCTTAGCTT...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAAAGCTAAGGTTAGAATaGGGGTTCCGAACTGAAATA +
Preference number: 5 (lower is better)
Translates to: DKNKAILEVGALESEYYPKLRLE*GFRTEI
Trigger: TATTTCAGTTCGGAACCCCAATTCTAACCTTAGCTT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS TCA 90 bp ACCTCAAATAGACTAGCTGTGAGTTCTTCCAATTCCTGTCCAAGTTaGTCTCGCACTTTTGAAAGCCTCTCACATTCTTCATCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: TSNRLAVSSSNSCPS*SRTFESLSHSSSFN
Trigger: GTTAAAAGATGAAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAACTTGGACAGGAATTGGAAGAACTCACAGCTAGTCTATTTGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547055.1
CDS-3UTR CAA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTAGTTGATCTCGCACTTTaGAAAGCCTCTCACATTCTT +
Preference number: 5 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLVDLAL*KASHIL
Trigger: AAGAATGTGAGAGGCTTTCAAAAGTGCGAGATCAAC...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CAA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATCTGCTGTTGCCTGCTaGATATTTGCTTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSSAVAC*IFASLT
Trigger: GGTGAGAGAAGCAAATATCAAGCAGGCAACAGCAGA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000417413.7
ENST00000483530.6
ENST00000550536.5
ENST00000551641.5
ENST00000552199.5
ENST00000553099.5
CDS-3UTR CAA 90 bp CTAGGCATGGTACTGATGGTTTTCACCATAACATACACCAATGTCCTTTTGTCTTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: LGMVLMVFTITYTNVLLSCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...AGACAAAAGGACATTGGTGTATGTTATGGTGAAAACCATCAGTACCATGCCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp TTGGAGAACTGGACAATACAAGTGTCTTCAATGCAGCTACTTCAGCTTGAAGTATGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: LENWTIQVSSMQLLQLEVCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...TACTTCAAGCTGAAGTAGCTGCATTGAAGACACTTGTATTGTCCAGTTCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547591.5
CDS-3UTR CAA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTCTACGTTGCCCAGGTaGGAATATAGTAGCTATTCA +
Preference number: 5 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCSTLPR*EYSSYS
Trigger: TGAATAGCTACTATATTCCAACCTGGGCAACGTAGA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCATCCTTTTCTGTTGCCTaGCTCTTCCTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSSFSVA*LFLTAP
Trigger: AGGAGCTGTTAGGAAGAGCAAGGCAACAGAAAAGGA...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTTTCAGAAACCAAATCTaGTTCTTCCAGTGTGGATGC +
Preference number: 5 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCFRNQI*FFQCGC
Trigger: GCATCCACACTGGAAGAACAAGATTTGGTTTCTGAA...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CACCACTACACCCAGCTCATGTACTTACTTTTAATGACAAATGAACCACCCCAACAAATTCATACTGCATaGGACTCTTTTAAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: HHYTQLMYLLLMTNEPPQQIHTA*DSFKQC
Trigger: ACACTGCTTAAAAGAGTCCAATGCAGTATGAATTTG...TTGGGGTGGTTCATTTGTCATTAAAAGTAAGTACATGAGCTGGGTGTAGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAACAGTTTCTATCTGCTaGGGTGTGGGGCATGATACA +
Preference number: 5 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSTVSIC*GVGHDT
Trigger: TGTATCATGCCCCACACCCAAGCAGATAGAAACTGT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GATAAAAATAAAGCCATTCTAGAGGTGGGGGCCTTGGAAAGTGAGTACTATCCAACTGTATTTACCCTATaGTGCTACCAAACAACAGAT +
Preference number: 5 (lower is better)
Translates to: DKNKAILEVGALESEYYPTVFTL*CYQTTD
Trigger: ATCTGTTGTTTGGTAGCACAATAGGGTAAATACAGT...TGGATAGTACTCACTTTCCAAGGCCCCCACCTCTAGAATGGCTTTATTTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CTCTCCTCTAGACAACACATGACAGTTTCCTCCCTTAATGAAATACTGAGATTATGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSSRQHMTVSSLNEILRLCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...TAATCTCAGTATTTCATTAAGGGAGGAAACTGTCATGTGTTGTCTAGAGGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378815.10
CDS-3UTR CAA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTTGCAGCTACTTCAGCTaGAAGTACATCAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: TILSPGIHMKELHNVQKCCSYFS*KYINFS
Trigger: GGAAAAATTGATGTACTTCAAGCTGAAGTAGCTGCA...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATGATAAGTCAGCCTCTTaGCAGTCTTTTACAATTGGC +
Preference number: 5 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNDKSAS*QSFTIG
Trigger: GCCAATTGTAAAAGACTGCAAAGAGGCTGACTTATC...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCACATCTACAGGTAAGATaGACCAAACCTCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSHLQVR*TKPLNR
Trigger: CCTGTTCAGAGGTTTGGTCAATCTTACCTGTAGATG...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS-3UTR CAA 90 bp TTGATCTGTCAAACACTGAATTTCTGTCTCTGTTATGCACATACCCAAACTTTCTTCAGAAACCAAATCTaGTTCTTCCAGTGTGGATGC +
Preference number: 5 (lower is better)
Translates to: LICQTLNFCLCYAHTQTFFRNQI*FFQCGC
Trigger: GCATCCACACTGGAAGAACAAGATTTGGTTTCTGAA...GAAAGTTTGGGTATGTGCATAACAGAGACAGAAATTCAGTGTTTGACAGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAGGGTTTGCTTTGGTATaGACATTTCCTAGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSGFALV*TFPREL
Trigger: GAGCTCTCTAGGAAATGTCAATACCAAAGCAAACCC...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp ACAATTTTATCTCCAGGCATCCACATGAAAGAACTCCACAATGTTCAGAAGTGTAGGACAAATAGCACATaGTGTGAAAACACAATGGAG +
Preference number: 5 (lower is better)
Translates to: TILSPGIHMKELHNVQKCRTNST*CENTME
Trigger: CTCCATTGTGTTTTCACACAATGTGCTATTTGTCCT...ACACTTCTGAACATTGTGGAGTTCTTTCATGTGGATGCCTGGAGATAAAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GCAAGTAGCTGGTATTCATTCATTTTGCTGCCATGTAATAATCACCCATTCTGTACTGTATTTACCCTATaGTGCTACCAAACAACAGAT +
Preference number: 5 (lower is better)
Translates to: ASSWYSFILLPCNNHPFCTVFTL*CYQTTD
Trigger: ATCTGTTGTTTGGTAGCACAATAGGGTAAATACAGT...ACAGAATGGGTGATTATTACATGGCAGCAAAATGAATGAATACCAGCTACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp CACTGCTGCTGTGAATACAAATTGATTAACTTTTCTGGATGGCAATCTAGCAATAACCCTCTCCAAAACTaGACTTTGTGTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: HCCCEYKLINFSGWQSSNNPLQN*TLCFFI
Trigger: AATGAAGAAACACAAAGTCAAGTTTTGGAGAGGGTT...ATTGCTAGATTGCCATCCAGAAAAGTTAATCAATTTGTATTCACAGCAGCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247833.12
ENST00000550536.5
CDS-3UTR CAA 90 bp GGCAACTATAAATTACATTCACTAGTACACCTGGAATTCTTCATAGTGTGTTCAAGTCAGTTTTACAATTaGGAATGCAGAGATCAAGTG +
Preference number: 5 (lower is better)
Translates to: GNYKLHSLVHLEFFIVCSSQFYN*ECRDQV
Trigger: CACTTGATCTCTGCATTCCAAATTGTAAAACTGACT...TGAACACACTATGAAGAATTCCAGGTGTACTAGTGAATGTAATTTATAGTTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247833.12
ENST00000550536.5
ENST00000551641.5
ENST00000553099.5
CDS GCA 72 bp TCAACTCCCCCGAACACAAGTCTGGCGGCACGGAGCTaGCTACTTGGGCGCGACTCCGGGCGCCTGCCCGGA +
Preference number: 6 (lower is better)
Translates to: STPPNTSLAARS*LLGRDSGRLPG
Trigger: TCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CAA 72 bp CCCCGAACACAAGTCTGGCGGCACGGAGCTGCCTACTaGGGCGCGACTCCGGGCGCCTGCCCGGAATTTCCC +
Preference number: 6 (lower is better)
Translates to: PRTQVWRHGAAY*GATPGACPEFP
Trigger: GGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CCA 72 bp CCCGAACACAAGTCTGGCGGCACGGAGCTGCCTACTTaGGCGCGACTCCGGGCGCCTGCCCGGAATTTCCCA +
Preference number: 6 (lower is better)
Translates to: PEHKSGGTELPT*ARLRAPARNFP
Trigger: TGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 72 bp AGACTGGGACACGAAACCACCCCAGGTCCACAGCCCTaGCGCGCGGCGTCCGGTGTTGTGAGCTGCTTCCGA +
Preference number: 6 (lower is better)
Translates to: RLGHETTPGPQP*RAASGVVSCFR
Trigger: TCGGAAGCAGCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGGACCTGGGGTGGTTTCGTGTCCCAGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CAA 90 bp CTTCTGGAGCCAGTAAGCTCGCGCTTCCTGGGCGGTCGGGGCGAGTaGTCAACGCTGGGAGGGCAGAGCCATGCAATCCCACCCGTGCAG +
Preference number: 6 (lower is better)
Translates to: LLEPVSSRFLGGRGE*STLGGQSHAIPPVQ
Trigger: CTGCACGGGTGGGATTGCATGGCTCTGCCCTCCCAGCGTTGACAACTCGCCCCGACCGCCCAGGAAGCGCGAGCTTACTGGCTCCAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 72 bp CACGGAGCTGCCTACTTGGGCGCGACTCCGGGCGCCTaGCCGGAATTTCCCACCAGGTTTCACCGAAACCTC +
Preference number: 6 (lower is better)
Translates to: HGAAYLGATPGA*PEFPTRFHRNL
Trigger: GAGGTTTCGGTGAAACCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CCA 72 bp CCGTGCAGTTCGTCTCAACTCCCCCGAACACAAGTCTaGCGGCACGGAGCTGCCTACTTGGGCGCGACTCCG +
Preference number: 6 (lower is better)
Translates to: PCSSSQLPRTQV*RHGAAYLGATP
Trigger: CGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAGACGAACTGCACGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CAA 90 bp TCTCAACTCCCCCGAACACAAGTCTGGCGGCACGGAGCTGCCTACTaGGGCGCGACTCCGGGCGCCTGCCCGGAATTTCCCACCAGGTTT +
Preference number: 6 (lower is better)
Translates to: SQLPRTQVWRHGAAY*GATPGACPEFPTRF
Trigger: AAACCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGGCAGCTCCGTGCCGCCAGACTTGTGTTCGGGGGAGTTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS TCA 72 bp CAGGTCCACAGCCCTGCCGCGCGGCGTCCGGTGTTGTaGGCTGCTTCCGACTTGTTCGGGAACTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: QVHSPAARRPVL*AASDLFGNSLF
Trigger: GAAGAGAGAGTTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 72 bp CCACAGCCCTGCCGCGCGGCGTCCGGTGTTGTGAGCTaGTTCCGACTTGTTCGGGAACTCTCTCTTCATCCT +
Preference number: 6 (lower is better)
Translates to: PQPCRAASGVVS*FRLVRELSLHP
Trigger: AGGATGAAGAGAGAGTTCCCGAACAAGTCGGAAGCAGCTCACAACACCGGACGCCGCGCGGCAGGGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 72 bp CAACGCTGGGAGGGCAGAGCCATGCAATCCCACCCGTaGAGTTCGTCTCAACTCCCCCGAACACAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: QRWEGRAMQSHP*SSSQLPRTQVW
Trigger: CCAGACTTGTGTTCGGGGGAGTTGAGACGAACTGCACGGGTGGGATTGCATGGCTCTGCCCTCCCAGCGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS GCA 72 bp AAACCTCCCGAGGGTGACCTCTACGCCTCAGCACGGTaGCTCGCGCGTAGTTTCCTAAGACTGGGACACGAA +
Preference number: 6 (lower is better)
Translates to: KPPEGDLYASAR*LARSFLRLGHE
Trigger: TTCGTGTCCCAGTCTTAGGAAACTACGCGCGAGGCACCGTGCTGAGGCGTAGAGGTCACCCTCGGGAGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362025.9
ENST00000378809.8
ENST00000550536.5
ENST00000552199.5
CDS CCA 72 bp TGTGTAGGAAGTTCAGAAACATCTAATGCATTTGCCTaGATAGGTACAGAGGATAAAGCTGAAGGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: CVGSSETSNAFA*IGTEDKAEGCG
Trigger: GCCACACCCTTCAGCTTTATCCTCTGTACCTATCCAGGCAAATGCATTAGATGTTTCTGAACTTCCTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000247833.12
ENST00000362025.9
ENST00000378809.8
ENST00000378815.10
ENST00000417413.7
ENST00000483530.6
ENST00000549760.1
ENST00000550536.5
ENST00000552199.5
CDS GCA 72 bp CCCATCTTGGAACAAATTTACAAATCAGTAATCAGCTaGAGGACAGCTCTCAGCTTTCCATCAGGATTTCAG +
Preference number: 6 (lower is better)
Translates to: PILEQIYKSVIS*RTALSFPSGFQ
Trigger: CTGAAATCCTGATGGAAAGCTGAGAGCTGTCCTGCAGCTGATTACTGATTTGTAAATTTGTTCCAAGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481897.1
CDS TCA 72 bp GCTCTCAGCTTTCCATCAGGATTTCAGCTTCTCAGCTaGAAATATCCTCATGATGACTGTTCAAGTCTCAAA +
Preference number: 6 (lower is better)
Translates to: ALSFPSGFQLLS*KYPHDDCSSLK
Trigger: TTTGAGACTTGAACAGTCATCATGAGGATATTTTCAGCTGAGAAGCTGAAATCCTGATGGAAAGCTGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481897.1
CDS CCA 72 bp TCCCCTAATTTAATTCTGTGTTTACAGGACTTACTCTaGCCAGTGAGAGCACATTTTCTCTTTGCAGTCTTT +
Preference number: 6 (lower is better)
Translates to: SPNLILCLQDLL*PVRAHFLFAVF
Trigger: AAAGACTGCAAAGAGAAAATGTGCTCTCACTGGCCAGAGTAAGTCCTGTAAACACAGAATTAAATTAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417413.7
ENST00000552199.5
CDS TCA 72 bp GCTAAAGTGATGAAAAGGACAAAGTCTCTGCCCTTGTaGGACTTACATTCTATTAGTAGTATAAGTTTAATG +
Preference number: 6 (lower is better)
Translates to: AKVMKRTKSLPL*DLHSISSISLM
Trigger: CATTAAACTTATACTACTAATAGAATGTAAGTCTCACAAGGGCAGAGACTTTGTCCTTTTCATCACTTTAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481897.1