RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB3IL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167994

Ensembl transcript IDs: ENST00000301773.9, ENST00000394836.7, ENST00000526200.1, ENST00000530888.1, ENST00000531922.2, ENST00000533136.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGTGAAGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTaGCTCAGTGCTGCCTCCATGGCCTGTCTGTCCATCCATTCTGCC +
Preference number: 1 (lower is better)
Translates to: AVKSRPVCPRMDVWC*LSAASMACLSIHSA
Trigger: GGCAGAATGGATGGACAGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACTTCACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR CCA 90 bp TCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATaGCCTGTCTGTCCATCCATTCTGCCTCTGGCTCAGGGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: SVPGWTCGAGSVLPP*PVCPSILPLAQGWL
Trigger: GAGCCAGCCCTGAGCCAGAGGCAGAATGGATGGACAGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR GCA 90 bp CTTGCCGTGAAGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTaGTGGCTCAGTGCTGCCTCCATGGCCTGTCTGTCCATCCATTCT +
Preference number: 1 (lower is better)
Translates to: LAVKSRPVCPRMDVW*WLSAASMACLSIHS
Trigger: AGAATGGATGGACAGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACTTCACGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR TCA 90 bp GGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAACAGGCGTGGGTaGTCTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCC +
Preference number: 1 (lower is better)
Translates to: GRVSAWPPTAENRRG*SEALSVFYCGRKCP
Trigger: GGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAGATCACCCACGCCTGTTTTCAGCTGTGGGTGGCCATGCAGACACGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR GCA 90 bp GCGTTACATTCCATCCAAAGAAGGAAATCCGGACGTGGTGAGGGATaGGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: ALHSIQRRKSGRGEG*VQVGAPNAGPEWAL
Trigger: CAGAGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCTTTGGATGGAATGTAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTACCTGCAGGCAGTTCTaGGGACTGGGGAGGGGGCGC +
Preference number: 2 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWATCRQF*GLGRGR
Trigger: GCGCCCCCTCCCCAGTCCCCAGAACTGCCTGCAGGT...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGTCTGGGGTGGGTGTTTaGTCTGTCTCAGAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQSGVGV*SVSELP
Trigger: GGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGA...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGAGGGCCCAGGTCCTaGCTGCCCACCCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAGGPRS*LPTQAP
Trigger: TGGGGCCTGGGTGGGCAGGCAGGACCTGGGCCCTCC...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACCAGGGCTTGGCAGCTaGGGTGGAGGGTACCCTGGA +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKPGLGS*GGGYPG
Trigger: TCCAGGGTACCCTCCACCCCAGCTGCCAAGCCCTGG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACCCAGGGCTTGGCAGCTaGGGTGGAGGGTACCCTGGA +
Preference number: 2 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHPGLGS*GGGYPG
Trigger: TCCAGGGTACCCTCCACCCCAGCTGCCAAGCCCTGG...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAAGGATGGACGTGTGGTaGTGGCTCAGTGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKRMDVW*WLSAAS
Trigger: GGAGGCAGCACTGAGCCAGCACCACACGTCCATCCT...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGTGTGTCGGCTTGTTCTaGGGTGGGTGTTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQCVGLF*GGCLLC
Trigger: ACAGAGCAAACACCCACCCCAGAACAAGCCGACACA...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCACCTGCAGGCAGTTCTaGGGACTGGGGAGGGGGCGC +
Preference number: 2 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLTCRQF*GLGRGR
Trigger: GCGCCCCCTCCCCAGTCCCCAGAACTGCCTGCAGGT...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAATCTGGGGTGGGTGTTTaGTCTGTCTCAGAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKSGVGV*SVSELP
Trigger: GGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGA...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACGTGCTGGCTCAGTGCTaGCTCCATGGCCTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHVLAQC*LHGLSV
Trigger: GACAGACAGGCCATGGAGGCAGCACTGAGCCAGCAC...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTATGGCCACAAGGGGGTaGTGCTGGCCCAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAMATRG*CWPRAW
Trigger: CCAAGCCCTGGGCCAGCAGCACCCCCTTGTGGCCAT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR TCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTCAGGCGTGGGTGATCTaGAGCCCTGTCTGTGTTCTA +
Preference number: 2 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAQAWVI*SPVCVL
Trigger: TAGAACACAGACAGGGCTTCAGATCACCCACGCCTG...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR TCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACAGGCGTGGGTGATCTaGAGCCCTGTCTGTGTTCTA +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKQAWVI*SPVCVL
Trigger: TAGAACACAGACAGGGCTTCAGATCACCCACGCCTG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTTCTGGGGTGGGTGTTTaGTCTGTCTCAGAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPSGVGV*SVSELP
Trigger: GGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGA...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR-3UTR GCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACCAGCAACAAGGCACCTaGAGGCAGTTCTGGGGACTG +
Preference number: 2 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHQQQGT*RQFWGL
Trigger: CAGTCCCCAGAACTGCCTGCAGGTGCCTTGTTGCTG...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGGTGCTATGGAGGCCCTaGCAGCCCCTCCTAGTAGTC +
Preference number: 2 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGVLWRP*QPLLVV
Trigger: GACTACTAGGAGGGGCTGGCAGGGCCTCCATAGCAC...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTTTTGGGGCAATTCTGTaGTATGGAGGCCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAFGAIL*YGGPAS
Trigger: GCTGGCAGGGCCTCCATAGCACAGAATTGCCCCAAA...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAATTTGGGGCAATTCTGTaGTATGGAGGCCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKFGAIL*YGGPAS
Trigger: GCTGGCAGGGCCTCCATAGCACAGAATTGCCCCAAA...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACGGCTTGTTCTGGGGTaGGTGTTTGCTCTGTCTCAG +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKRLVLG*VFALSQ
Trigger: CTGAGACAGAGCAAACACCCACCCCAGAACAAGCCG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTCGGCTTGTTCTGGGGTaGGTGTTTGCTCTGTCTCAG +
Preference number: 2 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWARLVLG*VFALSQ
Trigger: CTGAGACAGAGCAAACACCCACCCCAGAACAAGCCG...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCCCAGGATGGACGTGTaGTGCTGGCTCAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAPRMDV*CWLSAA
Trigger: GGCAGCACTGAGCCAGCACCACACGTCCATCCTGGG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGGGGTGGAGGGTACCCTaGAGATCCAGCCACCCAGAA +
Preference number: 2 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGGWRVP*RSSHPE
Trigger: TTCTGGGTGGCTGGATCTCCAGGGTACCCTCCACCC...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGCTTGGCAGCTGGGGTaGAGGGTACCCTGGAGATCC +
Preference number: 2 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAAWQLG*RVPWRS
Trigger: GGATCTCCAGGGTACCCTCCACCCCAGCTGCCAAGC...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGTCTGGGGTGGGTGTTTaGTCTGTCTCAGAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGSGVGV*SVSELP
Trigger: GGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGA...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGAGGATGGACGTGTGGTaGTGGCTCAGTGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGRMDVW*WLSAAS
Trigger: GGAGGCAGCACTGAGCCAGCACCACACGTCCATCCT...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCCGTCTGTCCCAGGATaGACGTGTGGTGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAPSVPG*TCGAGS
Trigger: TGAGCCAGCACCACACGTCCATCCTGGGACAGACGG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCGGCAATTCTGTGCTATaGAGGCCCTGCCAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLGNSVL*RPCQPL
Trigger: GAGGGGCTGGCAGGGCCTCCATAGCACAGAATTGCC...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGCAATTCTGTGCTATaGAGGCCCTGCCAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAGNSVL*RPCQPL
Trigger: GAGGGGCTGGCAGGGCCTCCATAGCACAGAATTGCC...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAGTCTGTGTTCTACTGTaGCAGAAAGTGCCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKVCVLL*QKVPQS
Trigger: GGACTGGGGCACTTTCTGCCACAGTAGAACACAGAC...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR TCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTTCTTTGGTGCTTTCTTaGAATCCTCCTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWASLVLS*NPPGGG
Trigger: GCCACCACCAGGAGGATTTCAAGAAAGCACCAAAGA...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTTGTGTCGGCTTGTTCTaGGGTGGGTGTTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPCVGLF*GGCLLC
Trigger: ACAGAGCAAACACCCACCCCAGAACAAGCCGACACA...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGATGGACGTGTGGTGCTaGCTCAGTGCTGCCTCCATG +
Preference number: 2 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGMDVWC*LSAASM
Trigger: CATGGAGGCAGCACTGAGCCAGCACCACACGTCCAT...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR TCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTAGAACAGTCCCTTTCTaGAGACAAGCCAGCAACAAG +
Preference number: 2 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWARTVPF*RQASNK
Trigger: CTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCT...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR TCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAAGAACAGTCCCTTTCTaGAGACAAGCCAGCAACAAG +
Preference number: 2 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKRTVPF*RQASNK
Trigger: CTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCT...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR TCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCAAGGGAGGCCTTTATaGAGGGGGAGGGAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRQGRPL*RGREEG
Trigger: CCCTTCCTCCCTCCCCCTTCATAAAGGCCTCCCTTG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGAGGATGGACGTGTGGTaGTGGCTCAGTGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRRMDVW*WLSAAS
Trigger: GGAGGCAGCACTGAGCCAGCACCACACGTCCATCCT...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGGGTGGAGGGTACCCTaGAGATCCAGCCACCCAGAA +
Preference number: 2 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAGWRVP*RSSHPE
Trigger: TTCTGGGTGGCTGGATCTCCAGGGTACCCTCCACCC...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGTCTGTCCATCCATTCTaGCTCTGGCTCAGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LKPCLCSTVAESAPVLPASVHPF*LWLRAG
Trigger: GCCAGCCCTGAGCCAGAGGCAGAATGGATGGACAGA...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCAGCAACAAGGCACCTaGAGGCAGTTCTGGGGACTG +
Preference number: 2 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRQQQGT*RQFWGL
Trigger: CAGTCCCCAGAACTGCCTGCAGGTGCCTTGTTGCTG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR TCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGTCTTTGGTGCTTTCTTaGAATCCTCCTGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGSLVLS*NPPGGG
Trigger: GCCACCACCAGGAGGATTTCAAGAAAGCACCAAAGA...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCGGCTTGTTCTGGGGTaGGTGTTTGCTCTGTCTCAG +
Preference number: 2 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRRLVLG*VFALSQ
Trigger: CTGAGACAGAGCAAACACCCACCCCAGAACAAGCCG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACCCGTCTGTCCCAGGATaGACGTGTGGTGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHPSVPG*TCGAGS
Trigger: TGAGCCAGCACCACACGTCCATCCTGGGACAGACGG...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR-3UTR TCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGAGAACAGTCCCTTTCTaGAGACAAGCCAGCAACAAG +
Preference number: 2 (lower is better)
Translates to: LKPCLCSTVAESAPVLPARTVPF*RQASNK
Trigger: CTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCT...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR GCA 72 bp CAGTGCTGCCTCCATGGCCTGTCTGTCCATCCATTCTaGCTCTGGCTCAGGGCTGGCTCCAGGCCCCCGTCT +
Preference number: 3 (lower is better)
Translates to: QCCLHGLSVHPF*LWLRAGSRPPS
Trigger: AGACGGGGGCCTGGAGCCAGCCCTGAGCCAGAGGCAGAATGGATGGACAGACAGGCCATGGAGGCAGCACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR GCA 72 bp AAGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTaGTGGCTCAGTGCTGCCTCCATGGCCTGTCTGTCC +
Preference number: 3 (lower is better)
Translates to: KSRPVCPRMDVW*WLSAASMACLS
Trigger: GGACAGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR CCA 72 bp TCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTaGCTCAGTGCTGCCTCCATGGCCTGTCTGTCCATC +
Preference number: 3 (lower is better)
Translates to: SRPVCPRMDVWC*LSAASMACLSI
Trigger: GATGGACAGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR CCA 72 bp GTGAAGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTaGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: VKSRPVCPRMDV*CWLSAASMACL
Trigger: CAGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR GCA 72 bp TCTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTaGTCTGTCTCAGAGCTCCCCTTCAGGCCTGGGCCG +
Preference number: 3 (lower is better)
Translates to: SPCVSACSGVGV*SVSELPFRPGP
Trigger: CGGCCCAGGCCTGAAGGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
3UTR-3UTR CAA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGTCCCTGTGTGTCGGCTaGTTCTGGGGTGGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGSLCVG*FWGGCL
Trigger: CAAACACCCACCCCAGAACAAGCCGACACACAGGGA...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CAA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTTTCTGGGGTGGGTGTTaGCTCTGTCTCAGAGCTCCC +
Preference number: 3 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAFWGGC*LCLRAP
Trigger: GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAA...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CAA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCTTCTGGGGTGGGTGTTaGCTCTGTCTCAGAGCTCCC +
Preference number: 3 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLFWGGC*LCLRAP
Trigger: GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAA...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CAA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGTTCTGGGGTGGGTGTTaGCTCTGTCTCAGAGCTCCC +
Preference number: 3 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAFWGGC*LCLRAP
Trigger: GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAA...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CAA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGTCCCTGTGTGTCGGCTaGTTCTGGGGTGGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: LKPCLCSTVAESAPVLPASLCVG*FWGGCL
Trigger: CAAACACCCACCCCAGAACAAGCCGACACACAGGGA...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CAA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACATCTTAACAAGGCTTaGGGGCAATTCTGTGCTATG +
Preference number: 3 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKHLNKA*GQFCAM
Trigger: CATAGCACAGAATTGCCCCAAAGCCTTGTTAAGATG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
3UTR-3UTR CAA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCATCTTAACAAGGCTTaGGGGCAATTCTGTGCTATG +
Preference number: 3 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAHLNKA*GQFCAM
Trigger: CATAGCACAGAATTGCCCCAAAGCCTTGTTAAGATG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGGGAGGGCCCAGGTCCTaGCTGCCCACCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQGGPRS*LPTQAP
Trigger: TGGGGCCTGGGTGGGCAGGCAGGACCTGGGCCCTCC...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGGTCTGGCTGGGGTaGGCTGTCTGTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQLVWLG*AVCAPG
Trigger: CCCTGGGGCACAGACAGCCCACCCCAGCCAGACCAG...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGACCTGCAGGCAGTTCTaGGGACTGGGGAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQTCRQF*GLGRGR
Trigger: GCGCCCCCTCCCCAGTCCCCAGAACTGCCTGCAGGT...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAATTCGGTGGCGGCAGGTaGGGGTCAGCCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKFGGGR*GSARSG
Trigger: CCCTGAGCGGGCTGACCCGCACCTGCCGCCACCGAA...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACCTCTCTGTCTGGGGTaGGGGTGTGTCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKPLCLG*GCVPQR
Trigger: CCGCTGCGGGACACACCCTCACCCCAGACAGAGAGG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTGTCCAGCTGGGCGGCTaGGGGGCCCTCCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSVQLGG*GALLAL
Trigger: CAAGGCCAGGAGGGCCCCGCAGCCGCCCAGCTGGAC...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGACTGTGGGCAGCGTCTaGGAAGCCACCGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQTVGSV*EATGSM
Trigger: CATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGT...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACGGGAGGCCCTGGTCTaGCTGGGGTGGGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKREALV*LGWAVC
Trigger: ACAGACAGCCCACCCCAGCCAGACCAGGGCCTCCCG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGTCTGTCCATCCATTCTaGCTCTGGCTCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQSVHPF*LWLRAG
Trigger: GCCAGCCCTGAGCCAGAGGCAGAATGGATGGACAGA...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCGCAACACGTCCAGCTaGGCGGCTGCGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLRNTSS*AAAGPS
Trigger: GGAGGGCCCCGCAGCCGCCCAGCTGGACGTGTTGCG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCGCAACACGTCCAGCTaGGCGGCTGCGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNARNTSS*AAAGPS
Trigger: GGAGGGCCCCGCAGCCGCCCAGCTGGACGTGTTGCG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCCGAGCCGGATTCGGTaGCGGCAGGTGCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSPSRIR*RQVRVS
Trigger: GCTGACCCGCACCTGCCGCCACCGAATCCGGCTCGG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGCCGAGCCGGATTCGGTaGCGGCAGGTGCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGPSRIR*RQVRVS
Trigger: GCTGACCCGCACCTGCCGCCACCGAATCCGGCTCGG...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTAGGCCCTGGTCTGGCTaGGGTGGGCCGCTCCACATC +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPRPWSG*GGPLHI
Trigger: GATGTGGAGCGGCCCACCCCAGCCAGACCAGGGCCT...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS-3UTR TCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTTACAGGGCACAGGCCTaGTGGGGCGTAGCGGACAGT +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAYRAQA*WGVADS
Trigger: ACTGTCCGCTACGCCCCATCAGGCCTGTGCCCTGTA...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR TCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACCACCGGCTCAATGGTaGGCGTGTTGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKPPAQW*ACCPPR
Trigger: CCGTGGAGGACAACACGCTCACCATTGAGCCGGTGG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGGCGGGGGAGGGGTCTTaGCTCATCTTAACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQAGEGS*LILTRL
Trigger: AAGCCTTGTTAAGATGAGTCAAGACCCCTCCCCCGC...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGGAAAACAGGCGTGGGTaGTCTGAAGCCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQENRRG*SEALSV
Trigger: CACAGACAGGGCTTCAGATCACCCACGCCTGTTTTC...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTGAAATCCGGACGTGGTaGGGGATGCGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAEIRTW*GMRPGG
Trigger: CCCACCTGGACGCATCCCTCACCACGTCCGGATTTC...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAGAAATCCGGACGTGGTaGGGGATGCGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKEIRTW*GMRPGG
Trigger: CCCACCTGGACGCATCCCTCACCACGTCCGGATTTC...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCCTCTCTGTCTGGGGTaGGGGTGTGTCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSPLCLG*GCVPQR
Trigger: CCGCTGCGGGACACACCCTCACCCCAGACAGAGAGG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACATGGCCACAAGGGGGTaGTGCTGGCCCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHMATRG*CWPRAW
Trigger: CCAAGCCCTGGGCCAGCAGCACCCCCTTGTGGCCAT...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGTTTGGGGCAATTCTGTaGTATGGAGGCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQFGAIL*YGGPAS
Trigger: GCTGGCAGGGCCTCCATAGCACAGAATTGCCCCAAA...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCACCCAGGCCCCACATaGCAGGGCGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPHPGPT*QGACLH
Trigger: ATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCCTGGGGACTCCCTGTaGCCTTGGCAGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSPGDSL*PWQGSV
Trigger: CACGGACCCCTGCCAAGGCCACAGGGAGTCCCCAGG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTCGGCCACCTTCACTGTaGGCAGCGTCTGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWARPPSL*AASAKP
Trigger: TGGCTTCGCAGACGCTGCCCACAGTGAAGGTGGCCG...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCCGAGCCGGATTCGGTaGCGGCAGGTGCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAPSRIR*RQVRVS
Trigger: GCTGACCCGCACCTGCCGCCACCGAATCCGGCTCGG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTACCTGCAGGCAGTTCTaGGGACTGGGGAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSTCRQF*GLGRGR
Trigger: GCGCCCCCTCCCCAGTCCCCAGAACTGCCTGCAGGT...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTGCTTGGCAGCTGGGGTaGAGGGTACCCTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAAWQLG*RVPWRS
Trigger: GGATCTCCAGGGTACCCTCCACCCCAGCTGCCAAGC...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCAGGGCTTGGCAGCTaGGGTGGAGGGTACCCTGGA +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPPGLGS*GGGYPG
Trigger: TCCAGGGTACCCTCCACCCCAGCTGCCAAGCCCTGG...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTGCGAGCAAAGGTTGGTaGAGGAGCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPASKGW*RSGEPG
Trigger: GCCTGGCTCCCCGCTCCTCCACCAACCTTTGCTCGC...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS-3UTR TCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATCCACCGGCTCAATGGTaGGCGTGTTGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHPPAQW*ACCPPR
Trigger: CCGTGGAGGACAACACGCTCACCATTGAGCCGGTGG...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGCGGGGCACCCAGCGTaGTCCTCAGAAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHAGHPA*SSEESM
Trigger: CATGGACTCTTCTGAGGAGCACGCTGGGTGCCCCGC...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTGGGGTGGGCTGTCTGTaGCCCAGGGCTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPGVGCL*PRALLS
Trigger: TGAGAGAAGAGCCCTGGGGCACAGACAGCCCACCCC...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGCTTGGCAGGGGTCCGTaGTCTTCCAGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGLGRGP*SSRGPG
Trigger: TCCCGGTCCCCTGGAAGAGCACGGACCCCTGCCAAG...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCTTGGCAGGGGTCCGTaGTCTTCCAGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSLGRGP*SSRGPG
Trigger: TCCCGGTCCCCTGGAAGAGCACGGACCCCTGCCAAG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGTCCAGCTGGGCGGCTaGGGGGCCCTCCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRVQLGG*GALLAL
Trigger: CAAGGCCAGGAGGGCCCCGCAGCCGCCCAGCTGGAC...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGCACCCAGGCCCCACATaGCAGGGCGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGHPGPT*QGACLH
Trigger: ATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGGAGGGCCCAGGTCCTaGCTGCCCACCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRGGPRS*LPTQAP
Trigger: TGGGGCCTGGGTGGGCAGGCAGGACCTGGGCCCTCC...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGCGGGGCAGAGGGTGCTaGTGGTGCTCTTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGRGRGC*WCSCGE
Trigger: CTCGCCACAAGAGCACCAGCAGCACCCTCTGCCCCG...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCCTGGGGACTCCCTGTaGCCTTGGCAGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLPGDSL*PWQGSV
Trigger: CACGGACCCCTGCCAAGGCCACAGGGAGTCCCCAGG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCCTGGGGACTCCCTGTaGCCTTGGCAGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAPGDSL*PWQGSV
Trigger: CACGGACCCCTGCCAAGGCCACAGGGAGTCCCCAGG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCCAGGATGGACGTGTaGTGCTGGCTCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPPRMDV*CWLSAA
Trigger: GGCAGCACTGAGCCAGCACCACACGTCCATCCTGGG...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACCCCAGGATGGACGTGTaGTGCTGGCTCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHPRMDV*CWLSAA
Trigger: GGCAGCACTGAGCCAGCACCACACGTCCATCCTGGG...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACCGTCTGTCCCAGGATaGACGTGTGGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKPSVPG*TCGAGS
Trigger: TGAGCCAGCACCACACGTCCATCCTGGGACAGACGG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAGGGTGGAGGGTACCCTaGAGATCCAGCCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKGWRVP*RSSHPE
Trigger: TTCTGGGTGGCTGGATCTCCAGGGTACCCTCCACCC...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTGGGCGCGTGTCTGCATaGCCACCCACAGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAGRVSA*PPTAEN
Trigger: GTTTTCAGCTGTGGGTGGCCATGCAGACACGCGCCC...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCTGGTCTGGCTGGGGTaGGCCGCTCCACATCCCGGC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPLVWLG*AAPHPG
Trigger: GCCGGGATGTGGAGCGGCCCACCCCAGCCAGACCAG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS-3UTR CCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCGGGAGGCCCTGGTCTaGCTGGGGTGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRREALV*LGWAAP
Trigger: TGGAGCGGCCCACCCCAGCCAGACCAGGGCCTCCCG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCTCTTGTGGCGAGAGTaGCCCTTTCGGGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLLLWRE*PFRGPA
Trigger: GGCCGGGCCCCGAAAGGGCCACTCTCGCCACAAGAG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCTCTTGTGGCGAGAGTaGCCCTTTCGGGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNALLWRE*PFRGPA
Trigger: GGCCGGGCCCCGAAAGGGCCACTCTCGCCACAAGAG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTTACAGGGCACAGGCCTaGTGGGGCGTAGCGGACAGT +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSYRAQA*WGVADS
Trigger: ACTGTCCGCTACGCCCCATCAGGCCTGTGCCCTGTA...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR TCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACGCCGAGCTTGGCCAGTaGCATCTCCTTCCGCAACCT +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHAELGQ*HLLPQP
Trigger: AGGTTGCGGAAGGAGATGTCACTGGCCAAGCTCGGC...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTGCCGAGCTTGGCCAGTaGCATCTCCTTCCGCAACCT +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPAELGQ*HLLPQP
Trigger: AGGTTGCGGAAGGAGATGTCACTGGCCAAGCTCGGC...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR TCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGCCGAGCTTGGCCAGTaGCATCTCCTTCCGCAACCT +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHAELGQ*HLLPQP
Trigger: AGGTTGCGGAAGGAGATGTCACTGGCCAAGCTCGGC...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTGTAGCGGACAGTCCCTaGACTCATGGCCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAVADSP*THGQEH
Trigger: GTGTTCCTGGCCATGAGTGCAGGGACTGTCCGCTAC...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGCTTGGCAGGGGTCCGTaGTCTTCCAGGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGLGRGP*SSRGPG
Trigger: TCCCGGTCCCCTGGAAGAGCACGGACCCCTGCCAAG...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAATCTCCATGGAAGAGCTaGGCAGGCGCAACACGTCCA +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKSPWKS*AGATRP
Trigger: TGGACGTGTTGCGCCTGCGCAGCTCTTCCATGGAGA...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAAGCTTCAGCTCCTTCTaGGCTCTGTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKSFSSF*ALCSSS
Trigger: GGAGGAGCTGCACAGAGCGCAGAAGGAGCTGAAGCT...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTACTGTGGGCAGCGTCTaGGAAGCCACCGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPTVGSV*EATGSM
Trigger: CATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGT...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGTTCGGTGGCGGCAGGTaGGGGTCAGCCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRFGGGR*GSARSG
Trigger: CCCTGAGCGGGCTGACCCGCACCTGCCGCCACCGAA...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGTTCGGTGGCGGCAGGTaGGGGTCAGCCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAFGGGR*GSARSG
Trigger: CCCTGAGCGGGCTGACCCGCACCTGCCGCCACCGAA...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTGAAGAAGTTGCACACTaGGGTGATCCTGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAEEVAH*GDPGPG
Trigger: TCCCGGGCCAGGATCACCGCAGTGTGCAACTTCTTC...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTGTGCTGGCTCAGTGCTaGCTCCATGGCCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPVLAQC*LHGLSV
Trigger: GACAGACAGGCCATGGAGGCAGCACTGAGCCAGCAC...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTAGGATGGACGTGTGGTaGTGGCTCAGTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPRMDVW*WLSAAS
Trigger: GGAGGCAGCACTGAGCCAGCACCACACGTCCATCCT...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCATGGCCACAAGGGGGTaGTGCTGGCCCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLMATRG*CWPRAW
Trigger: CCAAGCCCTGGGCCAGCAGCACCCCCTTGTGGCCAT...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCGGCGGGGCAGAGGGTaGTGCTGGTGCTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPRRGRG*CWCSCG
Trigger: GCCACAAGAGCACCAGCAGCACCCTCTGCCCCGCCG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTGCTGCTCCCGCACCTTaGACAGCCGCTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPAAPAP*TAAHIP
Trigger: AGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGC...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGGATTCCCTCCAGGCCTaGAACTCTGCAAACAGGATT +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQDSLQA*NSANRI
Trigger: AATCCTGTTTGCAGAGTTCCAGGCCTGGAGGGAATC...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCGGCCACCTTCACTGTaGGCAGCGTCTGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSRPPSL*AASAKP
Trigger: TGGCTTCGCAGACGCTGCCCACAGTGAAGGTGGCCG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCACCTGCAGGCAGTTCTaGGGACTGGGGAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPTCRQF*GLGRGR
Trigger: GCGCCCCCTCCCCAGTCCCCAGAACTGCCTGCAGGT...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTGCTTGGCAGCTGGGGTaGAGGGTACCCTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSAWQLG*RVPWRS
Trigger: GGATCTCCAGGGTACCCTCCACCCCAGCTGCCAAGC...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGGCGCGTGTCTGCATaGCCACCCACAGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHGRVSA*PPTAEN
Trigger: GTTTTCAGCTGTGGGTGGCCATGCAGACACGCGCCC...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAACGCTGGTCCTGAGTaGGCTCTGATGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHNAGPE*ALMGGR
Trigger: CCTCCCACCCATCAGAGCCCACTCAGGACCAGCGTT...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCTGCTGGTGCTCTTGTaGCGAGAGTGGCCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPLLVLL*REWPFR
Trigger: CCGAAAGGGCCACTCTCGCCACAAGAGCACCAGCAG...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCAGAGGGTGCTGCTaGTGCTCTTGTGGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHGRGCC*CSCGES
Trigger: ACTCTCGCCACAAGAGCACCAGCAGCACCCTCTGCC...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCTCCGAACGCTGGTCCTaGGTGGGCTCTGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLSERWS*VGSDGW
Trigger: CCACCCATCAGAGCCCACTCAGGACCAGCGTTCGGA...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGGAAATCCGGACGTGGTaGGGGATGCGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGEIRTW*GMRPGG
Trigger: CCCACCTGGACGCATCCCTCACCACGTCCGGATTTC...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCAGGCCGGCTCGTAGGTaGGGTGAACCGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPRPARR*GEPPCW
Trigger: CCAGCAAGGCGGTTCACCTCACCTACGAGCCGGCCT...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531922.2
CDS-3UTR GCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGGGTGGGCTGTCTGTaGCCCAGGGCTCTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAGVGCL*PRALLS
Trigger: TGAGAGAAGAGCCCTGGGGCACAGACAGCCCACCCC...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATTCTCCATGGAAGAGCTaGGCAGGCGCAACACGTCCA +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHSPWKS*AGATRP
Trigger: TGGACGTGTTGCGCCTGCGCAGCTCTTCCATGGAGA...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTAGCTCCTGTTCTAGCTaGTCCCGCACCTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPSSCSS*SRTLDS
Trigger: GCTGTCCAAGGTGCGGGAGCAGCTAGAACAGGAGCT...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACCGAGCCTCCTTCAGCTaGTTTTCTGATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHRASFS*FSDAAC
Trigger: GCAGGCGGCATCAGAAAAGCAGCTGAAGGAGGCTCG...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACTCTGGGGTGGGTGTTTaGTCTGTCTCAGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHSGVGV*SVSELP
Trigger: GGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGA...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTTCTGTCCATCCATTCTaGCTCTGGCTCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPSVHPF*LWLRAG
Trigger: GCCAGCCCTGAGCCAGAGGCAGAATGGATGGACAGA...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTGTGCTGGCTCAGTGCTaGCTCCATGGCCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSVLAQC*LHGLSV
Trigger: GACAGACAGGCCATGGAGGCAGCACTGAGCCAGCAC...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCAGCAACAAGGCACCTaGAGGCAGTTCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPQQQGT*RQFWGL
Trigger: CAGTCCCCAGAACTGCCTGCAGGTGCCTTGTTGCTG...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTGTGCTATGGAGGCCCTaGCAGCCCCTCCTAGTAGTC +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSVLWRP*QPLLVV
Trigger: GACTACTAGGAGGGGCTGGCAGGGCCTCCATAGCAC...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTTACTGTGGCAGAAAGTaGCCCAGTCCTTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAYCGRK*PSPSSG
Trigger: ACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTA...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCGGCGGGGCAGAGGGTaGTGCTGGTGCTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRRRGRG*CWCSCG
Trigger: GCCACAAGAGCACCAGCAGCACCCTCTGCCCCGCCG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATCAGTCCCTGCACTCATaGCCAGGAACACGGGACATG +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHQSLHS*PGTRDM
Trigger: CATGTCCCGTGTTCCTGGCCATGAGTGCAGGGACTG...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCTGGTCTGGCTGGGGTaGGCTGTCTGTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRLVWLG*AVCAPG
Trigger: CCCTGGGGCACAGACAGCCCACCCCAGCCAGACCAG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCGGGAGGCCCTGGTCTaGCTGGGGTGGGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRREALV*LGWAVC
Trigger: ACAGACAGCCCACCCCAGCCAGACCAGGGCCTCCCG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGCGGCCACCTTCACTGTaGGCAGCGTCTGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGRPPSL*AASAKP
Trigger: TGGCTTCGCAGACGCTGCCCACAGTGAAGGTGGCCG...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACCTGGCCCGGGAAGATaGCGAGATGTAGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKPGPGR*RDVVMA
Trigger: AGCCATTACTACATCTCGCCATCTTCCCGGGCCAGG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTGGAAGAAGCCGAGCTTaGCCAGTGACATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAGRSRA*PVTSPS
Trigger: GGAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCC...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGGAGCTCCCTGGTCTTTaGTGCTTTCTTGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQELPGL*CFLEIL
Trigger: GAGGATTTCAAGAAAGCACCAAAGACCAGGGAGCTC...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGAGGGATGCGTCCAGGTaGGAGCTCCGAACGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGRDASR*ELRTLV
Trigger: GACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCT...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCTGCTGGTGCTCTTGTaGCGAGAGTGGCCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSLLVLL*REWPFR
Trigger: CCGAAAGGGCCACTCTCGCCACAAGAGCACCAGCAG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATAGGGTCGGGCCAGACTaGTTCAGGAGAAGACTCAGC +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHRVGPD*FRRRLS
Trigger: GCTGAGTCTTCTCCTGAACCAGTCTGGCCCGACCCT...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGGGTGAACCGCCTTGCTaGGGACCACGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGGEPPC*GPRRGA
Trigger: TGCTCCTCTGCGTGGTCCCCAGCAAGGCGGTTCACC...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000531922.2
3UTR CAA 72 bp GTCTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTaGCTCTGTCTCAGAGCTCCCCTTCAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSLCVGLFWGGC*LCLRAPLQAWA
Trigger: GGCCCAGGCCTGAAGGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR TCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCACCGGCTCAATGGTaGGCGTGTTGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSPPAQW*ACCPPR
Trigger: CCGTGGAGGACAACACGCTCACCATTGAGCCGGTGG...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGAGTTGCACACTGCGGTaGTCCTGGCCCGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGSCTLR*SWPGKM
Trigger: CATCTTCCCGGGCCAGGATCACCGCAGTGTGCAACT...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCAGTTGCACACTGCGGTaGTCCTGGCCCGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLSCTLR*SWPGKM
Trigger: CATCTTCCCGGGCCAGGATCACCGCAGTGTGCAACT...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCAAGGGAGGCCTTTATaGAGGGGGAGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAQGRPL*RGREEG
Trigger: CCCTTCCTCCCTCCCCCTTCATAAAGGCCTCCCTTG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACCAGGCGTGGGTGATCTaGAGCCCTGTCTGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHQAWVI*SPVCVL
Trigger: TAGAACACAGACAGGGCTTCAGATCACCCACGCCTG...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACCTCAGAAGAGTCCATaGTTGCAAGGCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKPQKSP*LQGQTE
Trigger: CTCAGTCTGGCCTTGCAAGCATGGACTCTTCTGAGG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTGTAGCGGACAGTCCCTaGACTCATGGCCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSVADSP*THGQEH
Trigger: GTGTTCCTGGCCATGAGTGCAGGGACTGTCCGCTAC...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGAGCTTCAGCTCCTTCTaGGCTCTGTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGSFSSF*ALCSSS
Trigger: GGAGGAGCTGCACAGAGCGCAGAAGGAGCTGAAGCT...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTAGCACCGAGAGCTCCTaGATTGTGAAGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPSTESS*IVKSRQ
Trigger: CTGCCTGGACTTCACAATGCAGGAGCTCTCGGTGCT...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTACTGTGGGCAGCGTCTaGGAAGCCACCGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNATVGSV*EATGSM
Trigger: CATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAACACATGTGTTGGTGCTaGTACAGTCAACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKHMCWC*YSQPRP
Trigger: TGGCCGAGGTTGACTGTAGCAGCACCAACACATGTG...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGGCACATGTGTTGGTaGTGCTACAGTCAACCTCGG +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHGHMCW*CYSQPR
Trigger: CCGAGGTTGACTGTAGCAGCACCAACACATGTGCCC...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTGGGCACATGTGTTGGTaGTGCTACAGTCAACCTCGG +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPGHMCW*CYSQPR
Trigger: CCGAGGTTGACTGTAGCAGCACCAACACATGTGCCC...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCGTGCTGGCTCAGTGCTaGCTCCATGGCCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLVLAQC*LHGLSV
Trigger: GACAGACAGGCCATGGAGGCAGCACTGAGCCAGCAC...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTTACTGTGGCAGAAAGTaGCCCAGTCCTTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPYCGRK*PSPSSG
Trigger: ACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTA...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCACCCAGGCCCCACATaGCAGGGCGCGTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRHPGPT*QGACLH
Trigger: ATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACACCGCCTGTCAGCCCTaGCCGCGGCCGGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHTACQP*PRPVSR
Trigger: CCTACTGACCGGCCGCGGGCAGGGCTGACAGGCGGT...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCGGGGCAGAGGGTGCTaGTGGTGCTCTTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRRGRGC*WCSCGE
Trigger: CTCGCCACAAGAGCACCAGCAGCACCCTCTGCCCCG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGTCTCTCGGATCTCCATaGAAGAGCTGCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGSLGSP*KSCAGA
Trigger: TGCGCCTGCGCAGCTCTTCCATGGAGATCCGAGAGA...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCTGGCCCGGGAAGATaGCGAGATGTAGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPPGPGR*RDVVMA
Trigger: AGCCATTACTACATCTCGCCATCTTCCCGGGCCAGG...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACCGGCTTGTTCTGGGGTaGGTGTTTGCTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHRLVLG*VFALSQ
Trigger: CTGAGACAGAGCAAACACCCACCCCAGAACAAGCCG...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCGGCTTGTTCTGGGGTaGGTGTTTGCTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPRLVLG*VFALSQ
Trigger: CTGAGACAGAGCAAACACCCACCCCAGAACAAGCCG...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTTGTGTCGGCTTGTTCTaGGGTGGGTGTTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWACVGLF*GGCLLC
Trigger: ACAGAGCAAACACCCACCCCAGAACAAGCCGACACA...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGCCGTCTGTCCCAGGATaGACGTGTGGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGPSVPG*TCGAGS
Trigger: TGAGCCAGCACCACACGTCCATCCTGGGACAGACGG...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCCGTCTGTCCCAGGATaGACGTGTGGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLPSVPG*TCGAGS
Trigger: TGAGCCAGCACCACACGTCCATCCTGGGACAGACGG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGGTGGAGGGTACCCTaGAGATCCAGCCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAGWRVP*RSSHPE
Trigger: TTCTGGGTGGCTGGATCTCCAGGGTACCCTCCACCC...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGCCAGGGCTTGGCAGCTaGGGTGGAGGGTACCCTGGA +
Preference number: 4 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAPGLGS*GGGYPG
Trigger: TCCAGGGTACCCTCCACCCCAGCTGCCAAGCCCTGG...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTAACGCTGGTCCTGAGTaGGCTCTGATGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNANAGPE*ALMGGR
Trigger: CCTCCCACCCATCAGAGCCCACTCAGGACCAGCGTT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGGGCAGAGGGTGCTGCTaGTGCTCTTGTGGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGGRGCC*CSCGES
Trigger: ACTCTCGCCACAAGAGCACCAGCAGCACCCTCTGCC...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCGCAGCGAGCAAAGGTTaGTGGAGGAGCGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSAASKG*WRSGEP
Trigger: TGGCTCCCCGCTCCTCCACCAACCTTTGCTCGCTGC...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS-3UTR TCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAATCTCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKSRTIL*ASSNRL
Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGAGA...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCAGTTGCACACTGCGGTaGTCCTGGCCCGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSSCTLR*SWPGKM
Trigger: CATCTTCCCGGGCCAGGATCACCGCAGTGTGCAACT...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTGCGGGGGAGGGGTCTTaGCTCATCTTAACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSAGEGS*LILTRL
Trigger: AAGCCTTGTTAAGATGAGTCAAGACCCCTCCCCCGC...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCAAGGGAGGCCTTTATaGAGGGGGAGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPQGRPL*RGREEG
Trigger: CCCTTCCTCCCTCCCCCTTCATAAAGGCCTCCCTTG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTGAAAACAGGCGTGGGTaGTCTGAAGCCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSENRRG*SEALSV
Trigger: CACAGACAGGGCTTCAGATCACCCACGCCTGTTTTC...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGTCCGAACGCTGGTCCTaGGTGGGCTCTGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRSERWS*VGSDGW
Trigger: CCACCCATCAGAGCCCACTCAGGACCAGCGTTCGGA...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGAAGAGTCCATGCTTaGAAGGCCAGACTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHRRVHA*KARLRV
Trigger: GACCCTCAGTCTGGCCTTGCAAGCATGGACTCTTCT...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCGGGGCACCCAGCGTaGTCCTCAGAAGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRAGHPA*SSEESM
Trigger: CATGGACTCTTCTGAGGAGCACGCTGGGTGCCCCGC...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTAGCTTCAGCTCCTTCTaGGCTCTGTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNASFSSF*ALCSSS
Trigger: GGAGGAGCTGCACAGAGCGCAGAAGGAGCTGAAGCT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTAGCTCCTGTTCTAGCTaGTCCCGCACCTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNASSCSS*SRTLDS
Trigger: GCTGTCCAAGGTGCGGGAGCAGCTAGAACAGGAGCT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCAGCTCCTGTTCTAGCTaGTCCCGCACCTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLSSCSS*SRTLDS
Trigger: GCTGTCCAAGGTGCGGGAGCAGCTAGAACAGGAGCT...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCGTGCTGGCTCAGTGCTaGCTCCATGGCCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSVLAQC*LHGLSV
Trigger: GACAGACAGGCCATGGAGGCAGCACTGAGCCAGCAC...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCAGGATGGACGTGTGGTaGTGGCTCAGTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSRMDVW*WLSAAS
Trigger: GGAGGCAGCACTGAGCCAGCACCACACGTCCATCCT...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGTTTGGGGCAATTCTGTaGTATGGAGGCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGFGAIL*YGGPAS
Trigger: GCTGGCAGGGCCTCCATAGCACAGAATTGCCCCAAA...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCAGAGGGTGCTGCTGGTaGTCTTGTGGCGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSRGCCW*SCGESG
Trigger: GCCACTCTCGCCACAAGAGCACCAGCAGCACCCTCT...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCTCTCTCGGATCTCCATaGAAGAGCTGCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLSLGSP*KSCAGA
Trigger: TGCGCCTGCGCAGCTCTTCCATGGAGATCCGAGAGA...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTTCTCTCGGATCTCCATaGAAGAGCTGCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNASLGSP*KSCAGA
Trigger: TGCGCCTGCGCAGCTCTTCCATGGAGATCCGAGAGA...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTCCGCCTGCTTCATGTTaGCTTCTCGAACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWAPPASC*LLEPSC
Trigger: ACAAGATGGTTCGAGAAGCCAACATGAAGCAGGCGG...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAATGTAGTAATGGCTTTTaGAGTCCCCGAGCCGGATTC +
Preference number: 4 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKCSNGF*SPRAGF
Trigger: GAATCCGGCTCGGGGACTCCAAAAGCCATTACTACA...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTATGGACGTGTGGTGCTaGCTCAGTGCTGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAMDVWC*LSAASM
Trigger: CATGGAGGCAGCACTGAGCCAGCACCACACGTCCAT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGCCCAGGATGGACGTGTaGTGCTGGCTCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAPRMDV*CWLSAA
Trigger: GGCAGCACTGAGCCAGCACCACACGTCCATCCTGGG...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCCGTCTGTCCCAGGATaGACGTGTGGTGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPPSVPG*TCGAGS
Trigger: TGAGCCAGCACCACACGTCCATCCTGGGACAGACGG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACACCTGCAGGCAGTTCTaGGGACTGGGGAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHTCRQF*GLGRGR
Trigger: GCGCCCCCTCCCCAGTCCCCAGAACTGCCTGCAGGT...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCGGGTGGAGGGTACCCTaGAGATCCAGCCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPGWRVP*RSSHPE
Trigger: TTCTGGGTGGCTGGATCTCCAGGGTACCCTCCACCC...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACGTCTGTGTTCTACTGTaGCAGAAAGTGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHVCVLL*QKVPQS
Trigger: GGACTGGGGCACTTTCTGCCACAGTAGAACACAGAC...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCGGGCGCGTGTCTGCATaGCCACCCACAGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPGRVSA*PPTAEN
Trigger: GTTTTCAGCTGTGGGTGGCCATGCAGACACGCGCCC...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCAACGCTGGTCCTGAGTaGGCTCTGATGGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSNAGPE*ALMGGR
Trigger: CCTCCCACCCATCAGAGCCCACTCAGGACCAGCGTT...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGCCGAGCTTGGCCAGTaGCATCTCCTTCCGCAACCT +
Preference number: 4 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAAELGQ*HLLPQP
Trigger: AGGTTGCGGAAGGAGATGTCACTGGCCAAGCTCGGC...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGAGAAGAGTCCATGCTTaGAAGGCCAGACTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGRRVHA*KARLRV
Trigger: GACCCTCAGTCTGGCCTTGCAAGCATGGACTCTTCT...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR GCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCTCTCCATGGAAGAGCTaGGCAGGCGCAACACGTCCA +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPSPWKS*AGATRP
Trigger: TGGACGTGTTGCGCCTGCGCAGCTCTTCCATGGAGA...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCGAGCCTCCTTCAGCTaGTTTTCTGATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPRASFS*FSDAAC
Trigger: GCAGGCGGCATCAGAAAAGCAGCTGAAGGAGGCTCG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGAGCACCGAGAGCTCCTaGATTGTGAAGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGSTESS*IVKSRQ
Trigger: CTGCCTGGACTTCACAATGCAGGAGCTCTCGGTGCT...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCACATGTGTTGGTGCTaGTACAGTCAACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSHMCWC*YSQPRP
Trigger: TGGCCGAGGTTGACTGTAGCAGCACCAACACATGTG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCGAAGAAGTTGCACACTaGGGTGATCCTGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSEEVAH*GDPGPG
Trigger: TCCCGGGCCAGGATCACCGCAGTGTGCAACTTCTTC...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCTCTGGGGTGGGTGTTTaGTCTGTCTCAGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPSGVGV*SVSELP
Trigger: GGGGAGCTCTGAGACAGAGCAAACACCCACCCCAGA...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCTCTGTCCATCCATTCTaGCTCTGGCTCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPSVHPF*LWLRAG
Trigger: GCCAGCCCTGAGCCAGAGGCAGAATGGATGGACAGA...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCAGCAACAAGGCACCTaGAGGCAGTTCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPQQQGT*RQFWGL
Trigger: CAGTCCCCAGAACTGCCTGCAGGTGCCTTGTTGCTG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGTACTGTGGCAGAAAGTaGCCCAGTCCTTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGYCGRK*PSPSSG
Trigger: ACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTA...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGAGAGGGTGCTGCTGGTaGTCTTGTGGCGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRRGCCW*SCGESG
Trigger: GCCACTCTCGCCACAAGAGCACCAGCAGCACCCTCT...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACCCGCCTGCTTCATGTTaGCTTCTCGAACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHPPASC*LLEPSC
Trigger: ACAAGATGGTTCGAGAAGCCAACATGAAGCAGGCGG...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCCTGGCCCGGGAAGATaGCGAGATGTAGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLPGPGR*RDVVMA
Trigger: AGCCATTACTACATCTCGCCATCTTCCCGGGCCAGG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGGGAAGAAGCCGAGCTTaGCCAGTGACATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGGRSRA*PVTSPS
Trigger: GGAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCC...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCGGAAGAAGCCGAGCTTaGCCAGTGACATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLGRSRA*PVTSPS
Trigger: GGAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCC...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTTGTGTCGGCTTGTTCTaGGGTGGGTGTTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSCVGLF*GGCLLC
Trigger: ACAGAGCAAACACCCACCCCAGAACAAGCCGACACA...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGGCAATTCTGTGCTATaGAGGCCCTGCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAGNSVL*RPCQPL
Trigger: GAGGGGCTGGCAGGGCCTCCATAGCACAGAATTGCC...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGGTCTGTGTTCTACTGTaGCAGAAAGTGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGVCVLL*QKVPQS
Trigger: GGACTGGGGCACTTTCTGCCACAGTAGAACACAGAC...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCTTCAGCTGCTTTTCTaGTGCCGCCTGCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSLQLLF*CRLLHV
Trigger: AACATGAAGCAGGCGGCATCAGAAAAGCAGCTGAAG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATAGAACAGTCCCTTTCTaGAGACAAGCCAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHRTVPF*RQASNK
Trigger: CTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCT...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR TCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCGCGGGGGAGGGGTCTTaGCTCATCTTAACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPAGEGS*LILTRL
Trigger: AAGCCTTGTTAAGATGAGTCAAGACCCCTCCCCCGC...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGATGGCCACCCACAGCTaGAAACAGGCGTGGGTGATC +
Preference number: 4 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAMATHS*KQAWVI
Trigger: GATCACCCACGCCTGTTTTCAGCTGTGGGTGGCCAT...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACTCCGAACGCTGGTCCTaGGTGGGCTCTGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHSERWS*VGSDGW
Trigger: CCACCCATCAGAGCCCACTCAGGACCAGCGTTCGGA...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGCCAGGCCTGGAACTCTaGAAACAGGATTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGPGLEL*KQDCVH
Trigger: GTGGACACAATCCTGTTTGCAGAGTTCCAGGCCTGG...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCCAGGCCTGGAACTCTaGAAACAGGATTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLPGLEL*KQDCVH
Trigger: GTGGACACAATCCTGTTTGCAGAGTTCCAGGCCTGG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCACATGTGTTGGTGCTaGTACAGTCAACCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLHMCWC*YSQPRP
Trigger: TGGCCGAGGTTGACTGTAGCAGCACCAACACATGTG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCGGAAGAAGCCGAGCTTaGCCAGTGACATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPGRSRA*PVTSPS
Trigger: GGAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCC...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCGGCTTGTTCTGGGGTaGGTGTTTGCTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSRLVLG*VFALSQ
Trigger: CTGAGACAGAGCAAACACCCACCCCAGAACAAGCCG...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCTGTGTCGGCTTGTTCTaGGGTGGGTGTTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLCVGLF*GGCLLC
Trigger: ACAGAGCAAACACCCACCCCAGAACAAGCCGACACA...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGATGGACGTGTGGTGCTaGCTCAGTGCTGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRMDVWC*LSAASM
Trigger: CATGGAGGCAGCACTGAGCCAGCACCACACGTCCAT...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGGTCTGTGTTCTACTGTaGCAGAAAGTGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGVCVLL*QKVPQS
Trigger: GGACTGGGGCACTTTCTGCCACAGTAGAACACAGAC...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACAGGGATGCGTCCAGGTaGGAGCTCCGAACGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHRDASR*ELRTLV
Trigger: GACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCT...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGTCTCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGSRTIL*ASSNRL
Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGAGA...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGCTTCAGCTGCTTTTCTaGTGCCGCCTGCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGLQLLF*CRLLHV
Trigger: AACATGAAGCAGGCGGCATCAGAAAAGCAGCTGAAG...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCTTCAGCTGCTTTTCTaGTGCCGCCTGCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLLQLLF*CRLLHV
Trigger: AACATGAAGCAGGCGGCATCAGAAAAGCAGCTGAAG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCTCTTTGGTGCTTTCTTaGAATCCTCCTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLSLVLS*NPPGGG
Trigger: GCCACCACCAGGAGGATTTCAAGAAAGCACCAAAGA...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCAGGCGTGGGTGATCTaGAGCCCTGTCTGTGTTCTA +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRQAWVI*SPVCVL
Trigger: TAGAACACAGACAGGGCTTCAGATCACCCACGCCTG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGAAAACAGGCGTGGGTaGTCTGAAGCCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAENRRG*SEALSV
Trigger: CACAGACAGGGCTTCAGATCACCCACGCCTGTTTTC...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGAGCACCGAGAGCTCCTaGATTGTGAAGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRSTESS*IVKSRQ
Trigger: CTGCCTGGACTTCACAATGCAGGAGCTCTCGGTGCT...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACGTGCTATGGAGGCCCTaGCAGCCCCTCCTAGTAGTC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHVLWRP*QPLLVV
Trigger: GACTACTAGGAGGGGCTGGCAGGGCCTCCATAGCAC...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGTTTGGGGCAATTCTGTaGTATGGAGGCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRFGAIL*YGGPAS
Trigger: GCTGGCAGGGCCTCCATAGCACAGAATTGCCCCAAA...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACGCTGCTCCCGCACCTTaGACAGCCGCTCACATTCCT +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHAAPAP*TAAHIP
Trigger: AGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGC...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTTCAGGGCACATGTGTTaGTGCTGCTACAGTCAACCT +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNASGHMC*CCYSQP
Trigger: AGGTTGACTGTAGCAGCACCAACACATGTGCCCTGA...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTTGTAGTAATGGCTTTTaGAGTCCCCGAGCCGGATTC +
Preference number: 4 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNACSNGF*SPRAGF
Trigger: GAATCCGGCTCGGGGACTCCAAAAGCCATTACTACA...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCTGTGTCGGCTTGTTCTaGGGTGGGTGTTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSCVGLF*GGCLLC
Trigger: ACAGAGCAAACACCCACCCCAGAACAAGCCGACACA...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGGAGCTCCCTGGTCTTTaGTGCTTTCTTGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGELPGL*CFLEIL
Trigger: GAGGATTTCAAGAAAGCACCAAAGACCAGGGAGCTC...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCTCTCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPSRTIL*ASSNRL
Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGAGA...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCTCTTTGGTGCTTTCTTaGAATCCTCCTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPSLVLS*NPPGGG
Trigger: GCCACCACCAGGAGGATTTCAAGAAAGCACCAAAGA...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR TCA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCAGAACAGTCCCTTTCTaGAGACAAGCCAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLRTVPF*RQASNK
Trigger: CTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCT...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACATGGCCACCCACAGCTaGAAACAGGCGTGGGTGATC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHMATHS*KQAWVI
Trigger: GATCACCCACGCCTGTTTTCAGCTGTGGGTGGCCAT...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACCGAGCCTCCTTCAGCTaGTTTTCTGATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHRASFS*FSDAAC
Trigger: GCAGGCGGCATCAGAAAAGCAGCTGAAGGAGGCTCG...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACGGATTGTGTCCACCTTaGCCCGAGCCTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHGLCPP*PEPPSA
Trigger: AGCTGAAGGAGGCTCGGGGCAAGGTGGACACAATCC...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301773.9
CDS-3UTR GCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACTCTGTCCATCCATTCTaGCTCTGGCTCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHSVHPF*LWLRAG
Trigger: GCCAGCCCTGAGCCAGAGGCAGAATGGATGGACAGA...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR GCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACCAGCAACAAGGCACCTaGAGGCAGTTCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHQQQGT*RQFWGL
Trigger: CAGTCCCCAGAACTGCCTGCAGGTGCCTTGTTGCTG...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCCGCCTGCTTCATGTTaGCTTCTCGAACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPPPASC*LLEPSC
Trigger: ACAAGATGGTTCGAGAAGCCAACATGAAGCAGGCGG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCGATTCCCTCCAGGCCTaGAACTCTGCAAACAGGATT +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSDSLQA*NSANRI
Trigger: AATCCTGTTTGCAGAGTTCCAGGCCTGGAGGGAATC...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCTCAGGGCACATGTGTTaGTGCTGCTACAGTCAACCT +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSSGHMC*CCYSQP
Trigger: AGGTTGACTGTAGCAGCACCAACACATGTGCCCTGA...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACATGGACGTGTGGTGCTaGCTCAGTGCTGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHMDVWC*LSAASM
Trigger: CATGGAGGCAGCACTGAGCCAGCACCACACGTCCAT...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGGAGCTCCCTGGTCTTTaGTGCTTTCTTGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGELPGL*CFLEIL
Trigger: GAGGATTTCAAGAAAGCACCAAAGACCAGGGAGCTC...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGTCTTTGGTGCTTTCTTaGAATCCTCCTGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRSLVLS*NPPGGG
Trigger: GCCACCACCAGGAGGATTTCAAGAAAGCACCAAAGA...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCTTTTCTGATGCCGCCTaGTTCATGTTGGCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSFSDAA*FMLASR
Trigger: TCGAGAAGCCAACATGAAGCAGGCGGCATCAGAAAA...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGATTCCCTCCAGGCCTaGAACTCTGCAAACAGGATT +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRDSLQA*NSANRI
Trigger: AATCCTGTTTGCAGAGTTCCAGGCCTGGAGGGAATC...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGTTTTCTGATGCCGCCTaGTTCATGTTGGCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRFSDAA*FMLASR
Trigger: TCGAGAAGCCAACATGAAGCAGGCGGCATCAGAAAA...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR GCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACCCAGGCCTGGAACTCTaGAAACAGGATTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHPGLEL*KQDCVH
Trigger: GTGGACACAATCCTGTTTGCAGAGTTCCAGGCCTGG...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACTGTAGTAATGGCTTTTaGAGTCCCCGAGCCGGATTC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHCSNGF*SPRAGF
Trigger: GAATCCGGCTCGGGGACTCCAAAAGCCATTACTACA...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR TCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACAGAACAGTCCCTTTCTaGAGACAAGCCAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHRTVPF*RQASNK
Trigger: CTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCT...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CCA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACGAGCTCCCTGGTCTTTaGTGCTTTCTTGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHELPGL*CFLEIL
Trigger: GAGGATTTCAAGAAAGCACCAAAGACCAGGGAGCTC...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS GCA 90 bp CGCCGACTCCGCCAGGGGCCGAGCCGCCCCACCGCCTGTCAGCCCTaGCCGCGGCCGGTCAGTAGGTCTCAGACGCCTGGGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: RRLRQGPSRPTACQP*PRPVSRSQTPGLAA
Trigger: GGCCGCGAGCCCAGGCGTCTGAGACCTACTGACCGGCCGCGGGCAGGGCTGACAGGCGGTGGGGCGGCTCGGCCCCTGGCGGAGTCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS CCA 90 bp GGGTGTGTCCCGCAGCGGGACACACGGCGGGGCAGAGGGTGCTGCTaGTGCTCTTGTGGCGAGAGTGGCCCTTTCGGGGCCCGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GCVPQRDTRRGRGCC*CSCGESGPFGARPW
Trigger: CCAAGGCCGGGCCCCGAAAGGGCCACTCTCGCCACAAGAGCACCAGCAGCACCCTCTGCCCCGCCGTGTGTCCCGCTGCGGGACACACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS GCA 90 bp TGTGTCCCGCAGCGGGACACACGGCGGGGCAGAGGGTGCTGCTGGTaGTCTTGTGGCGAGAGTGGCCCTTTCGGGGCCCGGCCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: CVPQRDTRRGRGCCW*SCGESGPFGARPWW
Trigger: CCACCAAGGCCGGGCCCCGAAAGGGCCACTCTCGCCACAAGAGCACCAGCAGCACCCTCTGCCCCGCCGTGTGTCCCGCTGCGGGACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS CCA 90 bp CAGGGCACAGGCCTGATGGGGCGTAGCGGACAGTCCCTGCACTCATaGCCAGGAACACGGGACATGTCCCTCGGGCGGGGCACCCAGCGT +
Preference number: 5 (lower is better)
Translates to: QGTGLMGRSGQSLHS*PGTRDMSLGRGTQR
Trigger: ACGCTGGGTGCCCCGCCCGAGGGACATGTCCCGTGTTCCTGGCCATGAGTGCAGGGACTGTCCGCTACGCCCCATCAGGCCTGTGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS GCA 90 bp CCCTCGGGCGGGGCACCCAGCGTGCTCCTCAGAAGAGTCCATGCTTaGAAGGCCAGACTGAGGGTCCCTCTGGAGGGTGCCGGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: PSGGAPSVLLRRVHA*KARLRVPLEGAGKG
Trigger: TCCCTTCCCGGCACCCTCCAGAGGGACCCTCAGTCTGGCCTTGCAAGCATGGACTCTTCTGAGGAGCACGCTGGGTGCCCCGCCCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CAA 90 bp CCTGCCCACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGAGGATTGTGTCCACCTaGCCCCGAGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PAHPGPTCQGACLHGHPQRIVST*PRASFS
Trigger: GCTGAAGGAGGCTCGGGGCAAGGTGGACACAATCCT...CTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301773.9
CDS GCA 90 bp ATGTCCCTCGGGCGGGGCACCCAGCGTGCTCCTCAGAAGAGTCCATaGTTGCAAGGCCAGACTGAGGGTCCCTCTGGAGGGTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: MSLGRGTQRAPQKSP*LQGQTEGPSGGCRE
Trigger: TTCCCGGCACCCTCCAGAGGGACCCTCAGTCTGGCCTTGCAAGCATGGACTCTTCTGAGGAGCACGCTGGGTGCCCCGCCCGAGGGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CAA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAAAGCTGCTCCCGCACCTaGGACAGCCGCTCACATTCC +
Preference number: 5 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKSCSRT*DSRSHS
Trigger: GGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCT...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTTCAATGGTGAGCGTGTaGTCCTCCACGGCGGCCCGT +
Preference number: 5 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWASMVSV*SSTAAR
Trigger: ACGGGCCGCCGTGGAGGACAACACGCTCACCATTGA...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CACCCAGGCCCCACATGCCAGGGCGCGTGTCTGCATGGCCACCCACAGCTGAAATCAATGGTGAGCGTGTaGTCCTCCACGGCGGCCCGT +
Preference number: 5 (lower is better)
Translates to: HPGPTCQGACLHGHPQLKSMVSV*SSTAAR
Trigger: ACGGGCCGCCGTGGAGGACAACACGCTCACCATTGA...TTTCAGCTGTGGGTGGCCATGCAGACACGCGCCCTGGCATGTGGGGCCTGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS TCA 90 bp CACCCAGCGTGCTCCTCAGAAGAGTCCATGCTTGCAAGGCCAGACTaGGGGTCCCTCTGGAGGGTGCCGGGAAGGGAGGTAGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: HPACSSEESMLARPD*GSLWRVPGREVAGA
Trigger: GGCTCCTGCTACCTCCCTTCCCGGCACCCTCCAGAGGGACCCTCAGTCTGGCCTTGCAAGCATGGACTCTTCTGAGGAGCACGCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CAA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTAGCTGCTCCCGCACCTaGGACAGCCGCTCACATTCC +
Preference number: 5 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPSCSRT*DSRSHS
Trigger: GGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCT...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTCTGCCGCACCAGGCCTaGCTGGATGTAGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWALPHQA*LDVADV
Trigger: TACATCCGCTACATCCAGCAAGGCCTGGTGCGGCAG...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS CCA 90 bp TCGGGCCAGACTGGTTCAGGAGAAGACTCAGCAGCGAGCAAAGGTTaGTGGAGGAGCGGGGAGCCAGGCCTTGCAGAATGGGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGQTGSGEDSAASKG*WRSGEPGLAEWASC
Trigger: GCAGGACGCCCATTCTGCAAGGCCTGGCTCCCCGCTCCTCCACCAACCTTTGCTCGCTGCTGAGTCTTCTCCTGAACCAGTCTGGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS-3UTR CAA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGAGGAAGGGGCAGGTCTaGTCCAGGGTGGGGGATTCC +
Preference number: 5 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGRKGQV*SRVGDS
Trigger: GGAATCCCCCACCCTGGACAAGACCTGCCCCTTCCT...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATCTGCCGCACCAGGCCTaGCTGGATGTAGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHLPHQA*LDVADV
Trigger: TACATCCGCTACATCCAGCAAGGCCTGGTGCGGCAG...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGCCAGCCCGGGCTCCTaGCCCTCTCTGTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAASPGS*PSLSGV
Trigger: CACCCCAGACAGAGAGGGCAAGGAGCCCGGGCTGGC...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531922.2
CDS-3UTR CAA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCAGGAAGGGGCAGGTCTaGTCCAGGGTGGGGGATTCC +
Preference number: 5 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLRKGQV*SRVGDS
Trigger: GGAATCCCCCACCCTGGACAAGACCTGCCCCTTCCT...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTAGGAAGGGGCAGGTCTaGTCCAGGGTGGGGGATTCC +
Preference number: 5 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNARKGQV*SRVGDS
Trigger: GGAATCCCCCACCCTGGACAAGACCTGCCCCTTCCT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTTCAATGGTGAGCGTGTaGTCCTCCACGGCGGCCCGT +
Preference number: 5 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNASMVSV*SSTAAR
Trigger: ACGGGCCGCCGTGGAGGACAACACGCTCACCATTGA...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTTTCTGGGGTGGGTGTTaGCTCTGTCTCAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPFWGGC*LCLRAP
Trigger: GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAA...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CAA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATTTCTGGGGTGGGTGTTaGCTCTGTCTCAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHFWGGC*LCLRAP
Trigger: GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAA...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CAA 90 bp CGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGGTCCTGAGTGGGCTAGCGGGGGAGGGGTCTaGACTCATCTTAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: RGEGCVQVGAPNAGPEWASGGGV*THLNKA
Trigger: AGCCTTGTTAAGATGAGTCAAGACCCCTCCCCCGCT...AGCCCACTCAGGACCAGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCAGCAGCGAGCAAAGGTaGGTGGAGGAGCGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPSSEQR*VEERGA
Trigger: GGCTCCCCGCTCCTCCACCAACCTTTGCTCGCTGCT...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS TCA 90 bp CCAGGGCTCTTCTCTCAAGTTCCCCTCAAGTACAGGGCACAGGCCTaGTGGGGCGTAGCGGACAGTCCCTGCACTCATGGCCAGGAACAC +
Preference number: 5 (lower is better)
Translates to: PGLFSQVPLKYRAQA*WGVADSPCTHGQEH
Trigger: GTGTTCCTGGCCATGAGTGCAGGGACTGTCCGCTACGCCCCATCAGGCCTGTGCCCTGTACTTGAGGGGAACTTGAGAGAAGAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS-3UTR CAA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGCCGCCTGCTTCATGTaGGCTTCTCGAACCATCTTG +
Preference number: 5 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHAACFM*ASRTIL
Trigger: CAAGATGGTTCGAGAAGCCAACATGAAGCAGGCGGC...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp GCCCTGCCAGCCCCTCCTAGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACACTCTGCAAACAGGATaGTGTCCACCTTGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: ALPAPPSSPIGRPPGTRHTLQTG*CPPCPE
Trigger: CTCGGGGCAAGGTGGACACAATCCTGTTTGCAGAGT...GTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACTAGGAGGGGCTGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301773.9
CDS-3UTR CAA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTCTGCCGCACCAGGCCTaGCTGGATGTAGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNALPHQA*LDVADV
Trigger: TACATCCGCTACATCCAGCAAGGCCTGGTGCGGCAG...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGTCCAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTAGCGGGGGAGGGGTCTaGACTCATCTTAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: SPGPSVPGWTCGAGSVLPSGGGV*THLNKA
Trigger: AGCCTTGTTAAGATGAGTCAAGACCCCTCCCCCGCT...AGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGTGCAGCATGTCGATCTaGCCCCGAGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGCSMSI*PRASFS
Trigger: GCTGAAGGAGGCTCGGGGCAAGATCGACATGCTGCA...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTGTGCTGCTGGTGCTCTaGTGGCGAGAGTGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNAVLLVL*WREWPF
Trigger: AAAGGGCCACTCTCGCCACAAGAGCACCAGCAGCAC...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CTGAGACGGGGTGGGAGGGAAGGTGACAAGGGAGGCCTTTATGAAGGGGGAGGGATTGTGTCCACCTCCTaGCCCTCTCTGTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LRRGGREGDKGGLYEGGGIVSTS*PSLSGV
Trigger: CACCCCAGACAGAGAGGGCAAGGAGGTGGACACAAT...CCCTCCCCCTTCATAAAGGCCTCCCTTGTCACCTTCCCTCCCACCCCGTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS GCA 90 bp CTGAGTCCAGAGCAGGAGGCCCCAGGTCCCTGCAGAGCCAGGCAGTaGTCCCTGACTCAGCTGGGACTGGGCTTTCAAGTAGTAATCAAC +
Preference number: 5 (lower is better)
Translates to: LSPEQEAPGPCRARQ*SLTQLGLGFQVVIN
Trigger: GTTGATTACTACTTGAAAGCCCAGTCCCAGCTGAGTCAGGGAGCACTGCCTGGCTCTGCAGGGACCTGGGGCCTCCTGCTCTGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533136.1
CDS-3UTR CAA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGAGCTGCTCCCGCACCTaGGACAGCCGCTCACATTCC +
Preference number: 5 (lower is better)
Translates to: LKPCLCSTVAESAPVLPASCSRT*DSRSHS
Trigger: GGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCT...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGGGGAAGAAGCCGAGCTaGGCCAGTGACATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGGKKPS*ASDISF
Trigger: GAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCCC...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGTAGTCCAATAGGGAGGCCACCGGGAACAAGGCACAGGATGGCCACAAGGGGGTCCCTGTGTGTCGGCTaGTTCTGGGGTGGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SSPIGRPPGTRHRMATRGSLCVG*FWGGCL
Trigger: CAAACACCCACCCCAGAACAAGCCGACACACAGGGA...CCCCCTTGTGGCCATCCTGTGCCTTGTTCCCGGTGGCCTCCCTATTGGACTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS TCA 90 bp GGAAGAAGCCGAGCTTGGCCAGTGACATCTCCTTCCGCAACCTCATaGTCTCCCAGAACATGGGCTCTGTCAGAGGGTCGGGCCAGACTG +
Preference number: 5 (lower is better)
Translates to: GRSRAWPVTSPSATS*SPRTWALSEGRARL
Trigger: CAGTCTGGCCCGACCCTCTGACAGAGCCCATGTTCTGGGAGATCATGAGGTTGCGGAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS-3UTR CAA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCCTCAGGGCACATGTGTaGGTGCTGCTACAGTCAACC +
Preference number: 5 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLLRAHV*VLLQST
Trigger: GGTTGACTGTAGCAGCACCAACACATGTGCCCTGAG...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CTCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCGGGAAGAAGCCGAGCTaGGCCAGTGACATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPVCRLVLGWVFALSQSSGKKPS*ASDISF
Trigger: GAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCCC...GGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CAA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCGGGAAGAAGCCGAGCTaGGCCAGTGACATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPGKKPS*ASDISF
Trigger: GAAGGAGATGTCACTGGCCAAGCTCGGCTTCTTCCC...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CAA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCTTCTGGGGTGGGTGTTaGCTCTGTCTCAGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPFWGGC*LCLRAP
Trigger: GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAA...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CAA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCTCCCTGTGTGTCGGCTaGTTCTGGGGTGGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPSLCVG*FWGGCL
Trigger: CAAACACCCACCCCAGAACAAGCCGACACACAGGGA...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CAA 90 bp CTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGCCTCAGCGGGGGAGGGGTCTaGACTCATCTTAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: LLWQKVPQSFQRFWEQGLSGGGV*THLNKA
Trigger: AGCCTTGTTAAGATGAGTCAAGACCCCTCCCCCGCT...GAGGCCCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGTGCAGCATGTCGATCTaGCCCCGAGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRCSMSI*PRASFS
Trigger: GCTGAAGGAGGCTCGGGGCAAGATCGACATGCTGCA...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGGTGCTGCTGGTGCTCTaGTGGCGAGAGTGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRVLLVL*WREWPF
Trigger: AAAGGGCCACTCTCGCCACAAGAGCACCAGCAGCAC...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394836.7
ENST00000531922.2
CDS CCA 90 bp TGGCCGTCAGCTCTTCCAGCTCCTGTTCTAGCTGCTCCCGCACCTTaGACAGCCGCTCACATTCCTCGTCCTTTAGCTTCAGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: WPSALPAPVLAAPAP*TAAHIPRPLASAPS
Trigger: AGAAGGAGCTGAAGCTAAAGGACGAGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCTAGAACAGGAGCTGGAAGAGCTGACGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCGCCGCCTGCTTCATGTaGGCTTCTCGAACCATCTTG +
Preference number: 5 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPAACFM*ASRTIL
Trigger: CAAGATGGTTCGAGAAGCCAACATGAAGCAGGCGGC...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp TCCCTGTGTGTCGGCTTGTTCTGGGGTGGGTGTTTGCTCTGTCTCAGAGCTCCCCTCAGGGCACATGTGTaGGTGCTGCTACAGTCAACC +
Preference number: 5 (lower is better)
Translates to: SLCVGLFWGGCLLCLRAPLRAHV*VLLQST
Trigger: GGTTGACTGTAGCAGCACCAACACATGTGCCCTGAG...GGGAGCTCTGAGACAGAGCAAACACCCACCCCAGAACAAGCCGACACACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGAAGGAAATCCGGACGTGGTGAGGGATGCGTCCAGGTGGGAGCTCCGAACGCTACTCTGCAAACAGGATaGTGTCCACCTCCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: RRKSGRGEGCVQVGAPNATLQTG*CPPPCP
Trigger: AGGGCAAGGAGGTGGACACAATCCTGTTTGCAGAGT...AGCGTTCGGAGCTCCCACCTGGACGCATCCCTCACCACGTCCGGATTTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS-3UTR CAA 90 bp GTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGGTTTTGGGAGCAGGCTCAGGGCACATGTGTaGGTGCTGCTACAGTCAACC +
Preference number: 5 (lower is better)
Translates to: VFYCGRKCPSPSSGFGSRLRAHV*VLLQST
Trigger: GGTTGACTGTAGCAGCACCAACACATGTGCCCTGAG...CCTGCTCCCAAAACCGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CAGGCCCGTCTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATCATCTTAACAAGGCTTaGGGGCAATTCTGTGCTATG +
Preference number: 5 (lower is better)
Translates to: QARLSQDGRVVLAQCCLHHLNKA*GQFCAM
Trigger: CATAGCACAGAATTGCCCCAAAGCCTTGTTAAGATG...ATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAGACGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp AGATCCAGCCACCCAGAACAGTCCCTTTCTGAAGACAAGCCAGCAACAAGGCACTCCCTGTGTGTCGGCTaGTTCTGGGGTGGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RSSHPEQSLSEDKPATRHSLCVG*FWGGCL
Trigger: CAAACACCCACCCCAGAACAAGCCGACACACAGGGA...GTGCCTTGTTGCTGGCTTGTCTTCAGAAAGGGACTGTTCTGGGTGGCTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000526200.1
ENST00000531922.2
CDS-3UTR CAA 90 bp CTGTCCCAGGATGGACGTGTGGTGCTGGCTCAGTGCTGCCTCCATGGCCTGTCTCATCTTAACAAGGCTTaGGGGCAATTCTGTGCTATG +
Preference number: 5 (lower is better)
Translates to: LSQDGRVVLAQCCLHGLSHLNKA*GQFCAM
Trigger: CATAGCACAGAATTGCCCCAAAGCCTTGTTAAGATG...AGACAGGCCATGGAGGCAGCACTGAGCCAGCACCACACGTCCATCCTGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS-3UTR CAA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGACTCTGCAAACAGGATaGTGTCCACCTGTCGGGAAA +
Preference number: 5 (lower is better)
Translates to: LKPCLCSTVAESAPVLPATLQTG*CPPVGK
Trigger: TTTCCCGACAGGTGGACACAATCCTGTTTGCAGAGT...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531922.2
CDS GCA 90 bp GCTGTAATAGCAGCAGCAGCAGCAGCAGCCATTTCATCAAGCGCCTaGAGCGAACGGAGCAGACGCGCTTATTATTCCATCTTACATGGG +
Preference number: 5 (lower is better)
Translates to: AVIAAAAAAAISSSA*SERSRRAYYSILHG
Trigger: CCCATGTAAGATGGAATAATAAGCGCGTCTGCTCCGTTCGCTGCAGGCGCTTGATGAAATGGCTGCTGCTGCTGCTGCTGCTATTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533136.1
CDS-3UTR CAA 90 bp CTGAAGCCCTGTCTGTGTTCTACTGTGGCAGAAAGTGCCCCAGTCCTTCCAGCGCATCTTAACAAGGCTTaGGGGCAATTCTGTGCTATG +
Preference number: 5 (lower is better)
Translates to: LKPCLCSTVAESAPVLPAHLNKA*GQFCAM
Trigger: CATAGCACAGAATTGCCCCAAAGCCTTGTTAAGATG...CGCTGGAAGGACTGGGGCACTTTCTGCCACAGTAGAACACAGACAGGGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS GCA 72 bp CGCCAGGGGCCGAGCCGCCCCACCGCCTGTCAGCCCTaGCCGCGGCCGGTCAGTAGGTCTCAGACGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RQGPSRPTACQP*PRPVSRSQTPG
Trigger: CCCAGGCGTCTGAGACCTACTGACCGGCCGCGGGCAGGGCTGACAGGCGGTGGGGCGGCTCGGCCCCTGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394836.7
CDS CCA 72 bp TCCATGGAAGAGCTGCGCAGGCGCAACACGTCCAGCTaGGCGGCTGCGGGGCCCTCCTGGCCTTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SMEELRRRNTSS*AAAGPSWPWAS
Trigger: GGAGGCCCAAGGCCAGGAGGGCCCCGCAGCCGCCCAGCTGGACGTGTTGCGCCTGCGCAGCTCTTCCATGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS TCA 72 bp GCTCCCCAGGTGGGAGCGGCCAGGCCGGCTCGTAGGTaGGGTGAACCGCCTTGCTGGGGACCACGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: APQVGAARPARR*GEPPCWGPRRG
Trigger: TCCTCTGCGTGGTCCCCAGCAAGGCGGTTCACCTCACCTACGAGCCGGCCTGGCCGCTCCCACCTGGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531922.2
CDS CCA 72 bp GGCCTGATGGGGCGTAGCGGACAGTCCCTGCACTCATaGCCAGGAACACGGGACATGTCCCTCGGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: GLMGRSGQSLHS*PGTRDMSLGRG
Trigger: GCCCCGCCCGAGGGACATGTCCCGTGTTCCTGGCCATGAGTGCAGGGACTGTCCGCTACGCCCCATCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS CAA 90 bp TCCCTCGGGCGGGGCACCCAGCGTGCTCCTCAGAAGAGTCCATGCTaGCAAGGCCAGACTGAGGGTCCCTCTGGAGGGTGCCGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: SLGRGTQRAPQKSPC*QGQTEGPSGGCREG
Trigger: CCCTTCCCGGCACCCTCCAGAGGGACCCTCAGTCTGGCCTTGCAAGCATGGACTCTTCTGAGGAGCACGCTGGGTGCCCCGCCCGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS GCA 72 bp ACTCGGAGCCCTTCTCTCGGATCTCCATGGAAGAGCTaGGCAGGCGCAACACGTCCAGCTGGGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: TRSPSLGSPWKS*AGATRPAGRLR
Trigger: CCGCAGCCGCCCAGCTGGACGTGTTGCGCCTGCGCAGCTCTTCCATGGAGATCCGAGAGAAGGGCTCCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS CAA 72 bp AGCGTCTGCGAAGCCACCGGCTCAATGGTGAGCGTGTaGTCCTCCACGGCGGCCCGTACCAGCACCGAGAGC +
Preference number: 6 (lower is better)
Translates to: SVCEATGSMVSV*SSTAARTSTES
Trigger: GCTCTCGGTGCTGGTACGGGCCGCCGTGGAGGACAACACGCTCACCATTGAGCCGGTGGCTTCGCAGACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000530888.1
ENST00000531922.2
CDS CAA 90 bp ACTGTGGGCAGCGTCTGCGAAGCCACCGGCTCAATGGTGAGCGTGTaGTCCTCCACGGCGGCCCGTACCAGCACCGAGAGCTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: TVGSVCEATGSMVSV*SSTAARTSTESCGR
Trigger: TCTGCCACAGCTCTCGGTGCTGGTACGGGCCGCCGTGGAGGACAACACGCTCACCATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530888.1
CDS CAA 90 bp ACTGTGGGCAGCGTCTGCGAAGCCACCGGCTCAATGGTGAGCGTGTaGTCCTCCACGGCGGCCCGTACCAGCACCGAGAGCTCCTGCATT +
Preference number: 6 (lower is better)
Translates to: TVGSVCEATGSMVSV*SSTAARTSTESSCI
Trigger: AATGCAGGAGCTCTCGGTGCTGGTACGGGCCGCCGTGGAGGACAACACGCTCACCATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS GCA 72 bp AACACGGGACATGTCCCTCGGGCGGGGCACCCAGCGTaGTCCTCAGAAGAGTCCATGCTTGCAAGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: NTGHVPRAGHPA*SSEESMLARPD
Trigger: GTCTGGCCTTGCAAGCATGGACTCTTCTGAGGAGCACGCTGGGTGCCCCGCCCGAGGGACATGTCCCGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS GCA 72 bp GTCCAGGGTGGGGGATTCCCTCCAGGCCTGGAACTCTaGAAACAGGATTGTGTCCACCTTGCCCCGAGCCTC +
Preference number: 6 (lower is better)
Translates to: VQGGGFPPGLEL*KQDCVHLAPSL
Trigger: GAGGCTCGGGGCAAGGTGGACACAATCCTGTTTGCAGAGTTCCAGGCCTGGAGGGAATCCCCCACCCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301773.9
CDS GCA 72 bp CAGTCAACCTCGGCCACCTTCACTGTGGGCAGCGTCTaGGAAGCCACCGGCTCAATGGTGAGCGTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: QSTSATFTVGSV*EATGSMVSVLS
Trigger: GGACAACACGCTCACCATTGAGCCGGTGGCTTCGCAGACGCTGCCCACAGTGAAGGTGGCCGAGGTTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000530888.1
ENST00000531922.2
CDS CCA 72 bp TGGCCCGGGAAGATGGCGAGATGTAGTAATGGCTTTTaGAGTCCCCGAGCCGGATTCGGTGGCGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: WPGKMARCSNGF*SPRAGFGGGRC
Trigger: GCACCTGCCGCCACCGAATCCGGCTCGGGGACTCCAAAAGCCATTACTACATCTCGCCATCTTCCCGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS CAA 72 bp TCCTCTCGGTACACCCTTTCCAGGAAGGGGCAGGTCTaGTCCAGGGTGGGGGATTCCCTCCAGGCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SSRYTLSRKGQV*SRVGDSLQAWN
Trigger: GTTCCAGGCCTGGAGGGAATCCCCCACCCTGGACAAGACCTGCCCCTTCCTGGAAAGGGTGTACCGAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS TCA 72 bp TTCTCTCAAGTTCCCCTCAAGTACAGGGCACAGGCCTaGTGGGGCGTAGCGGACAGTCCCTGCACTCATGGC +
Preference number: 6 (lower is better)
Translates to: FSQVPLKYRAQA*WGVADSPCTHG
Trigger: GCCATGAGTGCAGGGACTGTCCGCTACGCCCCATCAGGCCTGTGCCCTGTACTTGAGGGGAACTTGAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301773.9
ENST00000531922.2
CDS TCA 72 bp CGAGCTTGGCCAGTGACATCTCCTTCCGCAACCTCATaGTCTCCCAGAACATGGGCTCTGCGTCCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: RAWPVTSPSATS*SPRTWALRPAA
Trigger: TGCGGCAGGACGCAGAGCCCATGTTCTGGGAGATCATGAGGTTGCGGAAGGAGATGTCACTGGCCAAGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
ENST00000533136.1
CDS CCA 72 bp ACTGGTTCAGGAGAAGACTCAGCAGCGAGCAAAGGTTaGTGGAGGAGCGGGGAGCCAGGCCTTGCAGAATGG +
Preference number: 6 (lower is better)
Translates to: TGSGEDSAASKG*WRSGEPGLAEW
Trigger: CCATTCTGCAAGGCCTGGCTCCCCGCTCCTCCACCAACCTTTGCTCGCTGCTGAGTCTTCTCCTGAACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS CAA 90 bp CTGGCCGTCAGCTCTTCCAGCTCCTGTTCTAGCTGCTCCCGCACCTaGGACAGCCGCTCACATTCCTCGTCCTTTAGCTTCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LAVSSSSSCSSCSRT*DSRSHSSSFSFSSF
Trigger: GAAGGAGCTGAAGCTAAAGGACGAGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCTAGAACAGGAGCTGGAAGAGCTGACGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS GCA 72 bp GTCCAGGGTGGGGGATTCCCTCCAGGCCTGGAACTCTaGAAACAGGATTGTGTCCACCTGTCGGGAAAAGGA +
Preference number: 6 (lower is better)
Translates to: VQGGGFPPGLEL*KQDCVHLSGKG
Trigger: TCCTTTTCCCGACAGGTGGACACAATCCTGTTTGCAGAGTTCCAGGCCTGGAGGGAATCCCCCACCCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531922.2
CDS CCA 72 bp CCAGAACATGGGCTCTGTCAGAGGGTCGGGCCAGACTaGTTCAGGAGAAGACTCAGCAGCGAGCAAAGGTTG +
Preference number: 6 (lower is better)
Translates to: PEHGLCQRVGPD*FRRRLSSEQRL
Trigger: CAACCTTTGCTCGCTGCTGAGTCTTCTCCTGAACCAGTCTGGCCCGACCCTCTGACAGAGCCCATGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526200.1
CDS GCA 72 bp GCAGCAGCAGCAGCAGCAGCCATTTCATCAAGCGCCTaGAGCGAACGGAGCAGACGCGCTTATTATTCCATC +
Preference number: 6 (lower is better)
Translates to: AAAAAAAISSSA*SERSRRAYYSI
Trigger: GATGGAATAATAAGCGCGTCTGCTCCGTTCGCTGCAGGCGCTTGATGAAATGGCTGCTGCTGCTGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533136.1
CDS CCA 72 bp GCTCTTCCAGCTCCTGTTCTAGCTGCTCCCGCACCTTaGACAGCCGCTCACATTCCTCGTCCTTTAGCTTCA +
Preference number: 6 (lower is better)
Translates to: ALPAPVLAAPAP*TAAHIPRPLAS
Trigger: TGAAGCTAAAGGACGAGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCTAGAACAGGAGCTGGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS CAA 72 bp AGCTCTTCCAGCTCCTGTTCTAGCTGCTCCCGCACCTaGGACAGCCGCTCACATTCCTCGTCCTTTAGCTTC +
Preference number: 6 (lower is better)
Translates to: SSSSSCSSCSRT*DSRSHSSSFSF
Trigger: GAAGCTAAAGGACGAGGAATGTGAGCGGCTGTCCAAGGTGCGGGAGCAGCTAGAACAGGAGCTGGAAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301773.9
ENST00000394836.7
ENST00000531922.2
CDS GCA 72 bp AGGATTGTGTCCACCTTGCCCCGAGCCTCCTTCAGCTaGTTTTCTGATGCCGCCTGCTTCATGTTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: RIVSTLPRASFS*FSDAACFMLAS
Trigger: AGAAGCCAACATGAAGCAGGCGGCATCAGAAAAGCAGCTGAAGGAGGCTCGGGGCAAGGTGGACACAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301773.9