RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB3GAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115839

Ensembl transcript IDs: ENST00000264158.13, ENST00000425393.1, ENST00000442034.5, ENST00000487003.5, ENST00000489858.1, ENST00000497080.1, ENST00000539493.2

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTaGCTTTTCCTGCAGGTTTGCTTCTATGCCAGCTCCTGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: PCWVPASSFHTPGVG*LFLQVCFYASSWEQ
Trigger: CTGCTCCCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR GCA 90 bp CCACACACCTGGAGTGGGTTGGCTTTTCCTGCAGGTTTGCTTCTATaGCAGCTCCTGGGAGCAGTTGTCTACCAGGACACACCTGGGGAG +
Preference number: 1 (lower is better)
Translates to: PHTWSGLAFPAGLLL*QLLGAVVYQDTPGE
Trigger: CTCCCCAGGTGTGTCCTGGTAGACAACTGCTCCCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CCA 90 bp GGAGTGGGTTGGCTTTTCCTGCAGGTTTGCTTCTATGCCAGCTCCTaGGAGCAGTTGTCTACCAGGACACACCTGGGGAGCAAGCAGAGG +
Preference number: 1 (lower is better)
Translates to: GVGWLFLQVCFYASS*EQLSTRTHLGSKQR
Trigger: CCTCTGCTTGCTCCCCAGGTGTGTCCTGGTAGACAACTGCTCCCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CCA 90 bp TGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTaGGTTGGCTTTTCCTGCAGGTTTGCTTCTATGCCAGCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: WILAGFLPAASTHLE*VGFSCRFASMPAPG
Trigger: CCCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR TCA 90 bp GACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTaGTTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGGACCTCC +
Preference number: 1 (lower is better)
Translates to: DTAQAWCWEVFPMLV*FLITQLDRALSRTS
Trigger: GGAGGTCCTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR GCA 90 bp ACCACGAATGCAGCCGCTAGCCTAGAGGCTGGTCACAGAAGAGAATaGGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTCTGATG +
Preference number: 1 (lower is better)
Translates to: TTNAAASLEAGHRRE*DEHRPASVRTECLM
Trigger: CATCAGACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCTAGCGGCTGCATTCGTGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR GCA 90 bp TTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTaGCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTGCA +
Preference number: 1 (lower is better)
Translates to: LHCFHYNPAGSLLGS*QQLPHTWSGLAFPA
Trigger: TGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR GCA 90 bp AGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTaGTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGG +
Preference number: 1 (lower is better)
Translates to: RIVGCIVSITTQLDP*WVPASSFHTPGVGW
Trigger: CCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CCA 90 bp CTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTaGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAG +
Preference number: 1 (lower is better)
Translates to: LAQGLLVALFPLQPS*ILAGFLPAASTHLE
Trigger: CTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CCA 90 bp ATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTaGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTT +
Preference number: 1 (lower is better)
Translates to: IVGCIVSITTQLDPC*VPASSFHTPGVGWL
Trigger: AAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR GCA 90 bp AGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTaGATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCT +
Preference number: 1 (lower is better)
Translates to: SDEATSIPARSRIVG*IVSITTQLDPCWVP
Trigger: AGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 90 bp TCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTaGGCTTTTCCTGCAGGTTTGCTTCTATGCCAGCTCCTGGGAGCA +
Preference number: 2 (lower is better)
Translates to: SLLGSCQQLPHTWSG*AFPAGLLLCQLLGA
Trigger: TGCTCCCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 90 bp CGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTaGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGGACCTC +
Preference number: 2 (lower is better)
Translates to: RHSSSLVLGSLSDAG*IPDHPTGQGPLQDL
Trigger: GAGGTCCTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR CAA 90 bp TGGCTTTTCCTGCAGGTTTGCTTCTATGCCAGCTCCTGGGAGCAGTaGTCTACCAGGACACACCTGGGGAGCAAGCAGAGGCCATCTAGC +
Preference number: 2 (lower is better)
Translates to: WLFLQVCFYASSWEQ*STRTHLGSKQRPSS
Trigger: GCTAGATGGCCTCTGCTTGCTCCCCAGGTGTGTCCTGGTAGACAACTGCTCCCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR GCA 90 bp CCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCGCAGGTTTGCTTCTATaGCAGCTCCTGGGAGCAGTT +
Preference number: 2 (lower is better)
Translates to: PCWVPASSFHTPGVGWLFAGLLL*QLLGAV
Trigger: AACTGCTCCCAGGAGCTGGCATAGAAGCAAACCTGC...GAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR GCA 90 bp CAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTCTTTTCCTGCAGGTTTaGTTCTATGCCAGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: QLDPCWVPASSFHTPGVGLFLQV*FYASSW
Trigger: CCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAG...ACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 90 bp AAGCCCATCCTCGCTGCCCCCTCCACGAAACGACACAGCTCAAGCTaGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATTCCTGATCAC +
Preference number: 2 (lower is better)
Translates to: KPILAAPSTKRHSSS*VLGSLSDAGLIPDH
Trigger: GTGATCAGGAATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGGGCAGCGAGGATGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR CCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATCTCCCAGGTTCTCCCTaGTACCTTCCCTCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDLPGSP*YLPSLR
Trigger: CCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAG...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR GCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGACAGCTCAAGCTTGGTaGTGGGAAGTCTTTCCGATG +
Preference number: 2 (lower is better)
Translates to: SLEAGHRRECDEHRPASVTAQAW*WEVFPM
Trigger: CATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGT...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR CCA 90 bp GTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCTCCACACACCTGGAGTaGGTTGGCTTTTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: VGCIVSITTQLDPCWVPASTHLE*VGFSCR
Trigger: CCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGA...GGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 90 bp AAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTaGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTG +
Preference number: 2 (lower is better)
Translates to: KDCWLHCFHYNPAGS*LGSCQQLPHTWSGL
Trigger: CAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 90 bp ATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATaGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: MRPHLSRLAQGLLVA*FPLQPSWILAGFLP
Trigger: TGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR TCA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTTTTCCGATGCTGGTTTaGTTCCTGATCACCCAACTG +
Preference number: 2 (lower is better)
Translates to: GHRRECDEHRPASVRTECFPMLV*FLITQL
Trigger: CAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAA...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR CAA 90 bp TCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTaGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: SSVMRPHLSRLAQGL*VALFPLQPSWILAG
Trigger: CCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR TCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAGGCAGCACTGTCTCTaGAGCCACCAACGAGTAATG +
Preference number: 2 (lower is better)
Translates to: LPSRGHLATQTQDILSSMRQHCL*SHQRVM
Trigger: CATTACTCGTTGGTGGCTTCAGAGACAGTGCTGCCT...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR TCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCTGCTGGTTTGATTCCTaGTCACCCAACTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: YTKAISRAEISQQLKPILCWFDS*SPNWTG
Trigger: CCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCA...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR GCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCCAAGCCCATCCTCGCTaGCCCCTCCACGAAACGACA +
Preference number: 2 (lower is better)
Translates to: ATESDTFLLLDSQCLCNAQAHPR*PLHETT
Trigger: TGTCGTTTCGTGGAGGGGGCAGCGAGGATGGGCTTG...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR GCA 90 bp AAAGGCACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCGAACCACGAAGTGTTTaGACAGACCACGAATGCAGC +
Preference number: 2 (lower is better)
Translates to: KGTKNVLETTALLGSAGCEPRSV*TDHECS
Trigger: GCTGCATTCGTGGTCTGTGCAAACACTTCGTGGTTC...GCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR GCA 90 bp GTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCTGGGTTGGCTTTTCCTaGAGGTTTGCTTCTATGCCA +
Preference number: 2 (lower is better)
Translates to: VGCIVSITTQLDPCWVPAWVGFS*RFASMP
Trigger: TGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCA...GGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR CCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCGCTCAAGCTTGGTGCTaGGAAGTCTTTCCGATGCTG +
Preference number: 2 (lower is better)
Translates to: KITKQRPSSHTDTRHLELAQAWC*EVFPML
Trigger: CAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGC...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR CAA 90 bp GCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCAACATTTaGTGGCAACGTGGTGTCAGTTTTCCCTGTAAGGGAGTGTGTTTT +
Preference number: 2 (lower is better)
Translates to: AGPPIHTAELTILNI*WQRGVSFPCKGVCF
Trigger: AAAACACACTCCCTTACAGGGAAAACTGACACCACGTTGCCACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR CCA 90 bp ATTTGTAGGATAAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCCCGCCTGCATCTGCGTaGACCAGTAAGAATGAAGTC +
Preference number: 2 (lower is better)
Translates to: ICRINAGPPIHTAELTILPPASA*TSKNEV
Trigger: GACTTCATTCTTACTGGTCCACGCAGATGCAGGCGG...GAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTTATCCTACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR CCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCTACTTGGTACAGCACTaGCCTCAGGCCGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: ATESDTFLLLDSQCLCNAYLVQH*PQAACI
Trigger: GATGCAGGCGGCCTGAGGCCAGTGCTGTACCAAGTA...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR CAA 90 bp AAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATaGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCT +
Preference number: 2 (lower is better)
Translates to: KSSVMRPHLSRLAQG*LVALFPLQPSWILA
Trigger: AGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR GCA 90 bp ATTTGTAGGATAAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCACAGCTCAAGCTTGGTaGTGGGAAGTCTTTCCGATG +
Preference number: 2 (lower is better)
Translates to: ICRINAGPPIHTAELTILTAQAW*WEVFPM
Trigger: CATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGT...GAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTTATCCTACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR TCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATTTTCCGATGCTGGTTTaGTTCCTGATCACCCAACTG +
Preference number: 2 (lower is better)
Translates to: TKNVLETTALLGSAGCKHFPMLV*FLITQL
Trigger: CAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAA...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR GCA 90 bp GAGAAAATGATCTGCTCTAAGAGCATATACAATTTGGATATTTGCAGAGGTCTCACCCAGCTGGATCCTTaGTGGGTTCCTGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: EKMICSKSIYNLDICRGLTQLDP*WVPASS
Trigger: GCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGT...GAGACCTCTGCAAATATCCAAATTGTATATGCTCTTAGAGCAGATCATTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR TCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCCAGAAGAGAATGCGATaGACACCGTCCTGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: ILYFIKYSTQPATTKRERQKRMR*TPSCQC
Trigger: ACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTG...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR TCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCAAGATGACCACCAGGTaGTTGAATAGACAGAATGTC +
Preference number: 2 (lower is better)
Translates to: KITKQRPSSHTDTRHLELKMTTR*LNRQNV
Trigger: GACATTCTGTCTATTCAATCACCTGGTGGTCATCTT...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR TCA 90 bp ATTTGTAGGATAAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCCACAAAGAATGTTCTTaGGACCACTGCCTTGTTAGG +
Preference number: 2 (lower is better)
Translates to: ICRINAGPPIHTAELTILHKECS*DHCLVR
Trigger: CCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTG...GAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTTATCCTACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR CCA 90 bp GAGAAAATGATCTGCTCTAAGAGCATATACAATTTGGATATTTGCAGAGGTCTCCAGCTGGATCCTTGCTaGGTTCCTGCCAGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: EKMICSKSIYNLDICRGLQLDPC*VPASSF
Trigger: GAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG...GAGACCTCTGCAAATATCCAAATTGTATATGCTCTTAGAGCAGATCATTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 90 bp ATTATTTGTAGGATAAATGCAGGCCCTCCGATCCACACAGCAGAGTaGACTATACTCAACATTTTGTGGCAACGTGGTGTCAGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: IICRINAGPPIHTAE*TILNILWQRGVSFP
Trigger: GGGAAAACTGACACCACGTTGCCACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTTATCCTACAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR CCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGGCTCAAGCTTGGTGCTaGGAAGTCTTTCCGATGCTG +
Preference number: 2 (lower is better)
Translates to: LNALAHIPNYTICMTVSRAQAWC*EVFPML
Trigger: CAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGC...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR CCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCGACACAGCTCAAGCTTaGTGCTGGGAAGTCTTTCCG +
Preference number: 2 (lower is better)
Translates to: STQCISTYTKLYYLHDSLDTAQA*CWEVFP
Trigger: CGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTC...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR-3UTR CCA 90 bp GAGAAAATGATCTGCTCTAAGAGCATATACAATTTGGATATTTGCAGAGGTCTCTCGCTCAAGGATTGTTaGTTGCATTGTTTCCATTAC +
Preference number: 2 (lower is better)
Translates to: EKMICSKSIYNLDICRGLSLKDC*LHCFHY
Trigger: GTAATGGAAACAATGCAACCAACAATCCTTGAGCGA...GAGACCTCTGCAAATATCCAAATTGTATATGCTCTTAGAGCAGATCATTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR GCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGCCAAGACTGTATTTTTaGAAGTGCTATTCTCTACTT +
Preference number: 2 (lower is better)
Translates to: LNALAHIPNYTICMTVSRPRLYF*KCYSLL
Trigger: AAGTAGAGAATAGCACTTGCAAAAATACAGTCTTGG...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR GCA 72 bp GCAGCCGCTAGCCTAGAGGCTGGTCACAGAAGAGAATaGGATGAACACCGTCCTGCCAGTGTGAGGACGGAG +
Preference number: 3 (lower is better)
Translates to: AAASLEAGHRRE*DEHRPASVRTE
Trigger: CTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCTAGCGGCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR TCA 72 bp GGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATTCCTaGTCACCCAACTGGACAGGGCCCTCTCCAGGACCT +
Preference number: 3 (lower is better)
Translates to: GAGKSFRCWFDS*SPNWTGPSPGP
Trigger: AGGTCCTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAGACTTCCCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR GCA 72 bp TTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTaGCAGCAGCTTCCACACACCTGGAGTGGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: FHYNPAGSLLGS*QQLPHTWSGLA
Trigger: AGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CCA 72 bp GCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTaGGTTGGCTTTTCCTGCAGGTTTGCTTCTATGCCA +
Preference number: 3 (lower is better)
Translates to: AGFLPAASTHLE*VGFSCRFASMP
Trigger: TGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR TCA 72 bp CAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTaGTTCCTGATCACCCAACTGGACAGGGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: QAWCWEVFPMLV*FLITQLDRALS
Trigger: GGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR GCA 72 bp TGGAGTGGGTTGGCTTTTCCTGCAGGTTTGCTTCTATaGCAGCTCCTGGGAGCAGTTGTCTACCAGGACACA +
Preference number: 3 (lower is better)
Translates to: WSGLAFPAGLLL*QLLGAVVYQDT
Trigger: TGTGTCCTGGTAGACAACTGCTCCCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR GCA 72 bp GGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTaGTGGGTTCCTGCCAGCAGCTTCCACACACCTGGA +
Preference number: 3 (lower is better)
Translates to: GCIVSITTQLDP*WVPASSFHTPG
Trigger: TCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CCA 72 bp TGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTaGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: CIVSITTQLDPC*VPASSFHTPGV
Trigger: CACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR CAA 90 bp CTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTAGCTCCTGGGAGCAGTaGTCTACCAGGACACACCTG +
Preference number: 3 (lower is better)
Translates to: LAQGLLVALFPLQPSWILSSWEQ*STRTHL
Trigger: CAGGTGTGTCCTGGTAGACAACTGCTCCCAGGAGCT...AAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR CAA 90 bp GATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCCACACCTGGAGTGGGTaGGCTTTTCCTGCAGGTTTG +
Preference number: 3 (lower is better)
Translates to: DCWLHCFHYNPAGSLLGSHTWSG*AFPAGL
Trigger: CAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTG...GGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR GCA 72 bp GCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTaGATTGTTTCCATTACAACCCAGCTGGATCCTTGC +
Preference number: 3 (lower is better)
Translates to: ATSIPARSRIVG*IVSITTQLDPC
Trigger: GCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CCA 72 bp GGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTaGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACA +
Preference number: 3 (lower is better)
Translates to: GLLVALFPLQPS*ILAGFLPAAST
Trigger: TGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR-3UTR CAA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCCTTTCCGATGCTGGTTaGATTCCTGATCACCCAACT +
Preference number: 3 (lower is better)
Translates to: IKYSTQPATTKRERMLYSLSDAG*IPDHPT
Trigger: AGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR CCA 72 bp ATCCACACAGCAGAGTTGACTATACTCAACATTTTGTaGCAACGTGGTGTCAGTTTTCCCTGTAAGGGAGTG +
Preference number: 3 (lower is better)
Translates to: IHTAELTILNIL*QRGVSFPCKGV
Trigger: CACTCCCTTACAGGGAAAACTGACACCACGTTGCCACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR CAA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGCGACACAGCTCAAGCTaGGTGCTGGGAAGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRRHSSS*VLGSLS
Trigger: GGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCG...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR TCA 72 bp AAATGGAGTACTTTAAAAAGGCACAAAGAATGTTCTTaGGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: KWSTLKRHKECS*DHCLVRLSRLQ
Trigger: TTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTGCCTTTTTAAAGTACTCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR GCA 72 bp ACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATaGCTTTGTAACGCCCAACCTCTCCTTTGTAGAATT +
Preference number: 3 (lower is better)
Translates to: TESDTFLLLDSQ*LCNAQPLLCRI
Trigger: AATTCTACAAAGGAGAGGTTGGGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR-3UTR CAA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGCTTTATTTTGCACACTaGCTGCTGATATATAGAACC +
Preference number: 3 (lower is better)
Translates to: LNALAHIPNYTICMTVSRLYFAH*LLIYRT
Trigger: GGTTCTATATATCAGCAGCAAGTGTGCAAAATAAAG...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCTGAGGCAGAGCTTTaGAGTAGGGAGCAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEAAEAEL*SREQGA
Trigger: CGCGCCCTGCTCCCTACTCCAAAGCTCTGCCTCAGC...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAAGGGGGTGGGAAGTCTaGCACGGAGTTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEARGWEV*HGVLPS
Trigger: AGAAGGCAGAACTCCGTGTCAGACTTCCCACCCCCT...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp CCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGCTACCAGGACACACCTaGGGAGCAAGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PAGSLLGSCQQLPHTWSGLPGHT*GASRGH
Trigger: ATGGCCTCTGCTTGCTCCCCAGGTGTGTCCTGGTAG...CCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGCAGCTGGATCCTTGCTaGGTTCCTGCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PAGSLLGSCQQLPHTWSGQLDPC*VPASSF
Trigger: GAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG...CCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CTGCCCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGCTCCCAGGTTCTCCCTaGTACCTTCCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPPPRNDTAQAWCWEVFPLPGSP*YLPSLR
Trigger: CCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAG...CGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp CTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTGCAGGTTTGCTGACAGGCACTCTGCATaGGTGCTCGAAGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPAASTHLEWVGFSCRFADRHSA*VLEGEP
Trigger: GGGCTCACCTTCGAGCACGCATGCAGAGTGCCTGTC...AGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp CCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTCTTCCTGCACCGGTaGCTAACACTTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PCWVPASSFHTPGVGWLFLFLHR*LTLQAA
Trigger: AGCAGCCTGAAGTGTTAGTCACCGGTGCAGGAAGAG...GAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGCAGTGGTGCGCAAAATaGATTCCCGGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQQWCAK*IPGQQG
Trigger: CCCCTGCTGGCCGGGAATTCATTTTGCGCACCACTG...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGAAACTAGAAATGTGGTaGTGTCATCCTCACACGGGG +
Preference number: 4 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALKLEMW*CHPHTG
Trigger: CCCCGTGTGAGGATGACATCACCACATTTCTAGTTT...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp CTGCCCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGTTCCTGCCAGAGGTGTaGCACTCCTTTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: LPPPRNDTAQAWCWEVFPFLPEV*HSFQPS
Trigger: GGAGGGTTGAAAGGAGTGGCACACCTCTGGCAGGAA...CGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp CAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTCAATTCCTCCTCTGGTaGAGTCATAGCTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QLDPCWVPASSFHTPGVGQFLLW*SHSCSP
Trigger: AGGGCTGCAGCTATGACTCCACCAGAGGAGGAATTG...ACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp GGGAGCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGCTGAGGCAGAGCTTTaGAGTAGGGAGCAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GSKQRPSSHTDTRHLELHAEAEL*SREQGA
Trigger: CGCGCCCTGCTCCCTACTCCAAAGCTCTGCCTCAGC...ATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTACTTGGTACAGCACTaGCCTCAGGCCGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCYLVQH*PQAACI
Trigger: GATGCAGGCGGCCTGAGGCCAGTGCTGTACCAAGTA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp TGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCCCATTACAACCCAGCTaGATCCTTGCTGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: WILAGFLPAASTHLEWVGPLQPS*ILAGFL
Trigger: CAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGG...GCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp CAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTATGTCTGGAGGTTGCTaGGGCCAAAAATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLDPCWVPASSFHTPGVGMSGGC*GQKYCC
Trigger: GCAGCAGTATTTTTGGCCTCAGCAACCTCCAGACAT...ACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp ACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGATCTGACACGGAGTTCTaGCTTCTTTCCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TTQLDPCWVPASSFHTPGSDTEF*LLSSGE
Trigger: CTCCCCAGAGGAAAGAAGGCAGAACTCCGTGTCAGA...TCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CTGCCCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGCAATTCCTCCTCTGGTaGAGTCATAGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPPPRNDTAQAWCWEVFPQFLLW*SHSCSL
Trigger: GAGGCTGCAGCTATGACTCCACCAGAGGAGGAATTG...CGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS-3UTR CCA 90 bp TTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTTCCACACACCTGGAGTaGGTTGGCTTTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLGSCQQLPHTWSGLAFPSTHLE*VGFSCR
Trigger: CCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGA...AGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGGACCAATGTGGAGCTTaGATAGGATCCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALDQCGA*IGSKSE
Trigger: TTCTGATTTGGATCCTATTCAAGCTCCACATTGGTC...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCATGCGTGCTCGAAGGTaGGCCCCCTCTGCCGATGTA +
Preference number: 4 (lower is better)
Translates to: VGCIVSITTQLDPCWVPAMRARR*APSADV
Trigger: TACATCGGCAGAGGGGGCTCACCTTCGAGCACGCAT...GGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp CCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGGCCTTCTTCCTCAAATaGAGATCGTCCAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: PAGSLLGSCQQLPHTWSGAFFLK*RSSKNL
Trigger: GAGATTCTTGGACGATCTGCATTTGAGGAAGAAGGC...CCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp ATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTTTCCTGCCAGAGGTGTaGCACTCCTTTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: ITTQLDPCWVPASSFHTPFLPEV*HSFQPS
Trigger: GGAGGGTTGAAAGGAGTGGCACACCTCTGGCAGGAA...AGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp CAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTCAAGAACAAATTCCTaGCAGAGGTGTGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: QLDPCWVPASSFHTPGVGSRTNS*QRCATP
Trigger: AGGAGTGGCACACCTCTGGCAGGAATTTGTTCTTGA...ACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGAGAGGTTCTCCATTATaGAGCAGTGTAAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALRGSPL*SSVSFP
Trigger: TGGGAAACTTACACTGCTGCATAATGGAGAACCTCT...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGGTGCCGAGCAAGGTCTaGAGGTTTCTGGATTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVVPSKV*RFLDCQ
Trigger: CTGGCAATCCAGAAACCTGCAGACCTTGCTCGGCAC...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTACACAAGGTAACAGGTaGCGAGCAAGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLGSCQQLPHTWSGLAFPTQGNR*RARSAG
Trigger: ACCTGCAGACCTTGCTCGGCACCTGTTACCTTGTGT...AGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTGGTTCCTGGGTTACTaGAATGTAGAGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WILAGFLPAASTHLEWVGWFLGY*NVERFS
Trigger: GGAGAACCTCTCTACATTCCAGTAACCCAGGAACCA...GCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCATACCCACATATTGCTTaGAATCTTCATCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEAYPHIA*NLHPGT
Trigger: AGTGCCCGGATGAAGATTCCAAGCAATATGTGGGTA...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR CAA 72 bp CTCGCTGCCCCCTCCACGAAACGACACAGCTCAAGCTaGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATT +
Preference number: 4 (lower is better)
Translates to: LAAPSTKRHSSS*VLGSLSDAGLI
Trigger: AATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGGGCAGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGACAAAGAGTGGCACCTaGCAGCCAGTGTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQTKSGT*QPVFPK
Trigger: CTTGGGAAACACTGGCTGTCAGGTGCCACTCTTTGT...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGACAAAGAGTGGCACCTaGCAGCCAGTGTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVTKSGT*QPVFPK
Trigger: CTTGGGAAACACTGGCTGTCAGGTGCCACTCTTTGT...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGGACCAATGTGGAGCTTaGATAGGATCCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: PAGSLLGSCQQLPHTWSGDQCGA*IGSKSE
Trigger: TTCTGATTTGGATCCTATTCAAGCTCCACATTGGTC...CCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp AAAGGCACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCATGCGTGCTCGAAGGTaGGCCCCCTCTGCCGATGTA +
Preference number: 4 (lower is better)
Translates to: KGTKNVLETTALLGSAGCMRARR*APSADV
Trigger: TACATCGGCAGAGGGGGCTCACCTTCGAGCACGCAT...GCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp TTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTCAAACAGCTTGTGAATaGTCCTGCCAGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLGSCQQLPHTWSGLAFPQTACE*SCQHVL
Trigger: GAGGACATGCTGGCAGGATCATTCACAAGCTGTTTG...AGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp TTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACAAACAGCGTCACTGTGTaGAGCAGGGGCAATCACCAC +
Preference number: 4 (lower is better)
Translates to: FPLQPSWILAGFLPAASTNSVTV*SRGNHH
Trigger: GTGGTGATTGCCCCTGCTGCACACAGTGACGCTGTT...TGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGGCTAAAACTTCAGACTaGTCTTCTAGCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALAKTSD*SSSRSS
Trigger: AGAAGATCTGCTAGAAGAGCAGTCTGAAGTTTTAGC...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCGGCACTCTGCATGCGTaGTCGAAGGTGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: DCWLHCFHYNPAGSLLGSGTLHA*SKVSPL
Trigger: GAGGGGGCTCACCTTCGAGCACGCATGCAGAGTGCC...GGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGACACAAGGTAACAGGTaGCGAGCAAGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQTQGNR*RARSAG
Trigger: ACCTGCAGACCTTGCTCGGCACCTGTTACCTTGTGT...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGGGTCACAGAAGAGAATaGGATGAACACCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVGHRRE*DEHRPA
Trigger: GGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp CTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTGCAGGTTTGCTCTTTTCCTGCAGGTTTaGTTCTATGCCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPAASTHLEWVGFSCRFALFLQV*FYASSW
Trigger: CCAGGAGCTGGCATAGAAGCAAACCTGCAGGAAAAG...AGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp TTGCAGAGGTCTCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCACCCAGCTGGATCCTTaGTGGGTTCCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQRSQMKSSVMRPHLSRLTQLDP*WVPASS
Trigger: GCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGT...GAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGAGACCTCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTCCTTCTAGCAGGAATTaGCTTAGCTGTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGSCQQLPHTWSGLAFPPSSRN*LSCFPG
Trigger: GCCTGGGAAACAGCTAAGCCAATTCCTGCTAGAAGG...AGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CTGCCCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGGATTCAGTCAGCCTCTaGGCATTCACAAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPPPRNDTAQAWCWEVFPDSVSL*AFTNSL
Trigger: CAAGCTGTTTGTGAATGCCCAGAGGCTGACTGAATC...CGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442034.5
3UTR CAA 72 bp TCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTaGATTCCTGATCACCCAACTGGACAGGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSLVLGSLSDAG*IPDHPTGQGPL
Trigger: GAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCATTTATGAATTGGAACTaGTGCCGGCTCTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEAFMNWN*CRLCQF
Trigger: AAATTGACAGAGCCGGCATCAGTTCCAATTCATAAA...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCATGCGTGCTCGAAGGTaGGCCCCCTCTGCCGATGTA +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILMRARR*APSADV
Trigger: TACATCGGCAGAGGGGGCTCACCTTCGAGCACGCAT...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTCAAACAGCTTGTGAATaGTCCTGCCAGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GHRRECDEHRPASVRTECQTACE*SCQHVL
Trigger: GAGGACATGCTGGCAGGATCATTCACAAGCTGTTTG...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCCAGTGGTGCGCAAAATaGATTCCCGGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DCWLHCFHYNPAGSLLGSQWCAK*IPGQQG
Trigger: CCCCTGCTGGCCGGGAATTCATTTTGCGCACCACTG...GGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCGACAGGCACTCTGCATaGGTGCTCGAAGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELDRHSA*VLEGEP
Trigger: GGGCTCACCTTCGAGCACGCATGCAGAGTGCCTGTC...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGCAGGTTTCTGGATTaGCAGATAGTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCCRFLD*QIVQHL
Trigger: AAGGTGCTGCACTATCTGGCAATCCAGAAACCTGCA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGGTGCCGAGCAAGGTCTaGAGGTTTCTGGATTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRLAQGLLVALFPLQPSWVPSKV*RFLDCQ
Trigger: CTGGCAATCCAGAAACCTGCAGACCTTGCTCGGCAC...CCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCAAGCCCATCCTCGCTaGCCCCTCCACGAAACGACA +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELQAHPR*PLHETT
Trigger: TGTCGTTTCGTGGAGGGGGCAGCGAGGATGGGCTTG...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTGGAGTCATAGCTaGAGCCTCATCAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCWWSHS*SLIRRF
Trigger: GAATCTTCTGATGAGGCTGCAGCTATGACTCCACCA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS-3UTR GCA 90 bp TTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTTGGGTTGGCTTTTCCTaGAGGTTTGCTTCTATGCCA +
Preference number: 4 (lower is better)
Translates to: LLGSCQQLPHTWSGLAFPWVGFS*RFASMP
Trigger: TGGCATAGAAGCAAACCTGCAGGAAAAGCCAACCCA...AGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGCTGCCTTCTTTCCTCTaGGGAGCCCATTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVLPSFL*GAHSLQ
Trigger: TTGAAGAGAATGGGCTCCCCAGAGGAAAGAAGGCAG...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCCTCCCAGGTTCTCCCTaGTACCTTCCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILLPGSP*YLPSLR
Trigger: CCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAG...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTAAAGGAAATTTCATCTaGTTTCTCTTCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: QLDPCWVPASSFHTPGVGKGNFI*FLFPCA
Trigger: GGCACATGGGAAGAGAAATCAGATGAAATTTCCTTT...ACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTCTTCGCCATTTGTGGTaGATTTGCACAAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GHRRECDEHRPASVRTECLRHLW*ICTKSG
Trigger: GCCACTCTTTGTGCAAATTCACCACAAATGGCGAAG...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTATCCAATCTTTGATTTaGAGATATCCAGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: QLDPCWVPASSFHTPGVGIQSLI*RYPADL
Trigger: CAGGTCTGCTGGATATCTTCAAATCAAAGATTGGAT...ACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp TGCCAGCTCCTGGGAGCAGTTGTCTACCAGGACACACCTGGGGAGCAAGCAGAGCAGATGGTGCAGACTTaGACTGATTGTAGAGATTAT +
Preference number: 4 (lower is better)
Translates to: CQLLGAVVYQDTPGEQAEQMVQT*TDCRDY
Trigger: ATAATCTCTACAATCAGTTCAAGTCTGCACCATCTG...CTCTGCTTGCTCCCCAGGTGTGTCCTGGTAGACAACTGCTCCCAGGAGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp ACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAAATATAATCCCGGGGTaGATACCACCTCACAAAATC +
Preference number: 4 (lower is better)
Translates to: TTQLDPCWVPASSFHTPGNIIPG*IPPHKI
Trigger: GATTTTGTGAGGTGGTATTCACCCCGGGATTATATT...TCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTTCACAAACAGCTTGTaGATGATCCTGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCFTNSL*MILPAC
Trigger: ACATGCTGGCAGGATCATTCACAAGCTGTTTGTGAA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCAGGGGGTGGGAAGTCTaGCACGGAGTTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DCWLHCFHYNPAGSLLGSRGWEV*HGVLPS
Trigger: AGAAGGCAGAACTCCGTGTCAGACTTCCCACCCCCT...GGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp AAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCAACATTTTGTGCAGTGGTGCGCAAAATaGATTCCCGGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KCRPSDPHSRVDYTQHFVQWCAK*IPGQQG
Trigger: CCCCTGCTGGCCGGGAATTCATTTTGCGCACCACTG...CACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGTTTCCGATGCTGGTTTaGTTCCTGATCACCCAACTG +
Preference number: 4 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQFPMLV*FLITQL
Trigger: CAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAA...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGAAACTAGAAATGTGGTaGTGTCATCCTCACACGGGG +
Preference number: 4 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQKLEMW*CHPHTG
Trigger: CCCCGTGTGAGGATGACATCACCACATTTCTAGTTT...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTCCCCTCATCACGTaGCTTCTTTCTTTCAATACA +
Preference number: 4 (lower is better)
Translates to: WILAGFLPAASTHLEWVGFPLIT*LLSFNT
Trigger: TGTATTGAAAGAAAGAAGGCACGTGATGAGGGGAAA...GCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTCTAACAGACCAATGTaGAGCTTGAATAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: WILAGFLPAASTHLEWVGSNRPM*SLNRIQ
Trigger: TTGGATCCTATTCAAGCTCCACATTGGTCTGTTAGA...GCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGTGGTTCCTGGGTTACTaGAATGTAGAGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQWFLGY*NVERFS
Trigger: GGAGAACCTCTCTACATTCCAGTAACCCAGGAACCA...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTTCTGTCATAGGTGCTaGTTCCTGGGTTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCFCHRC*FLGYWN
Trigger: ATTCCAGTAACCCAGGAACCAGCACCTATGACAGAA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATAAGCATCATAAAGGCTaGGAGGTCATCCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDKHHKG*EVIPQG
Trigger: GCCCTGGGGGATGACCTCCCAGCCTTTATGATGCTT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCAATATAATCCCGGGGTaGATACCACCTCACAAAATC +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCNIIPG*IPPHKI
Trigger: GATTTTGTGAGGTGGTATTCACCCCGGGATTATATT...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTTTCACAAACAGCTTGTaGATGATCCTGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GHRRECDEHRPASVRTECFTNSL*MILPAC
Trigger: ACATGCTGGCAGGATCATTCACAAGCTGTTTGTGAA...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTTGCACACTTGCTGCTaGTATATAGAACCACGAAGT +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCLHTCC*YIEPRS
Trigger: ACTTCGTGGTTCTATATATCAGCAGCAAGTGTGCAA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGCACAAAGAATGTTCTTaGGACCACTGCCTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVHKECS*DHCLVR
Trigger: CCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTG...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCAACAGCGTCACTGTGTaGAGCAGGGGCAATCACCAC +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILNSVTV*SRGNHH
Trigger: GTGGTGATTGCCCCTGCTGCACACAGTGACGCTGTT...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGCTTCTACCCACATATTaGTTGGAATCTTCATCCGGG +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVLLPTY*LESSSG
Trigger: CCCGGATGAAGATTCCAAGCAATATGTGGGTAGAAG...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTTCAAAGAGTCTCCTTTaGCTTCTAGCAGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: GHRRECDEHRPASVRTECSKSLL*LLAGIG
Trigger: GCCAATTCCTGCTAGAAGGCAAAGGAGACTCTTTGA...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCACTAACACTTCAGGCTaGTCCAGCAGGCAACTCACA +
Preference number: 4 (lower is better)
Translates to: VGCIVSITTQLDPCWVPATNTSG*SSRQLT
Trigger: TGTGAGTTGCCTGCTGGAGCAGCCTGAAGTGTTAGT...GGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATTCTGACACGGAGTTCTaGCTTCTTTCCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDSDTEF*LLSSGE
Trigger: CTCCCCAGAGGAAAGAAGGCAGAACTCCGTGTCAGA...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATGGTCACAGAAGAGAATaGGATGAACACCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDGHRRE*DEHRPA
Trigger: GGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCACCAAGACTGTATTTTTaGAAGTGCTATTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEAPRLYF*KCYSLL
Trigger: AAGTAGAGAATAGCACTTGCAAAAATACAGTCTTGG...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTGCAGGTTTGCTTCTATaGCAGCTCCTGGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: EIFSDEATSIPARSRIVGAGLLL*QLLGAV
Trigger: AACTGCTCCCAGGAGCTGGCATAGAAGCAAACCTGC...ACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 72 bp GGCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTaGCATTGTTTCCATTACAACCCAGCTGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: GHIYPGSLKDCW*HCFHYNPAGSL
Trigger: CAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 72 bp GTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATaGTTGGTTGCATTGTTTCCATTACAACCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VMRPHLSRLAQG*LVALFPLQPSW
Trigger: CCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCGAAACTGATAATTTATaGATTGGAACTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCETDNL*IGTDAG
Trigger: GCCGGCATCAGTTCCAATTCATAAATTATCAGTTTC...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCAGGGGGTGGGAAGTCTaGCACGGAGTTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: IKYSTQPATTKRERMLYSRGWEV*HGVLPS
Trigger: AGAAGGCAGAACTCCGTGTCAGACTTCCCACCCCCT...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCCAGAAGAGAATGCGATaGACACCGTCCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILQKRMR*TPSCQC
Trigger: ACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTG...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCATTATACTATCTGCATaGCAGTCTCTAGGTACCAAG +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCIILSA*QSLGTK
Trigger: CTTGGTACCTAGAGACTGTCATGCAGATAGTATAAT...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGAAACTAGAAATGTGGTaGTGTCATCCTCACACGGGG +
Preference number: 4 (lower is better)
Translates to: SRLAQGLLVALFPLQPSWKLEMW*CHPHTG
Trigger: CCCCGTGTGAGGATGACATCACCACATTTCTAGTTT...CCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGAGGTTCTCCATTATaGAGCAGTGTAAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVRGSPL*SSVSFP
Trigger: TGGGAAACTTACACTGCTGCATAATGGAGAACCTCT...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCGGCACTCTGCATGCGTaGTCGAAGGTGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERGTLHA*SKVSPL
Trigger: GAGGGGGCTCACCTTCGAGCACGCATGCAGAGTGCC...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATGTGCCGAGCAAGGTCTaGAGGTTTCTGGATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHVPSKV*RFLDCQ
Trigger: CTGGCAATCCAGAAACCTGCAGACCTTGCTCGGCAC...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTTCTGGATTGGGGAAGTaGAAAACTTTACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: GHRRECDEHRPASVRTECSGLGK*KTLLEW
Trigger: CCATTCCAGTAAAGTTTTGCACTTCCCCAATCCAGA...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTCTTGTCTTCTGGATTaGGGAAGTGCAAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCSCLLD*GSAKLY
Trigger: GTAAAGTTTTGCACTTCCCCAATCCAGAAGACAAGA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp CTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTGCAGGTTTGCTTCTTGTCTTCTGGATTaGGGAAGTGCAAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: LPAASTHLEWVGFSCRFASCLLD*GSAKLY
Trigger: GTAAAGTTTTGCACTTCCCCAATCCAGAAGACAAGA...AGCAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCTGCCTTCTTTCCTCTaGGGAGCCCATTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PARSRIVGCIVSITTQLDLPSFL*GAHSLQ
Trigger: TTGAAGAGAATGGGCTCCCCAGAGGAAAGAAGGCAG...ATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCGACACAGCTCAAGCTTaGTGCTGGGAAGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELDTAQA*CWEVFP
Trigger: CGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTC...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
3UTR CAA 72 bp ATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTaGGTTGCATTGTTTCCATTACAACCCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: MRPHLSRLAQGL*VALFPLQPSWI
Trigger: GATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp ATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTACAAAGAGTGGCACCTaGCAGCCAGTGTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: IVGCIVSITTQLDPCWVPTKSGT*QPVFPK
Trigger: CTTGGGAAACACTGGCTGTCAGGTGCCACTCTTTGT...AGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp AAAGGCACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCCTTCGCCATTTGTGGTaGATTTGCACAAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: KGTKNVLETTALLGSAGCLRHLW*ICTKSG
Trigger: GCCACTCTTTGTGCAAATTCACCACAAATGGCGAAG...GCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp TCTCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGACTTCGCCATTTGTGGTaGATTTGCACAAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SQMKSSVMRPHLSRLAQGLRHLW*ICTKSG
Trigger: GCCACTCTTTGTGCAAATTCACCACAAATGGCGAAG...TCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp GTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCCGTACACCAGGACCTTaGCATTCTCCTACATACATT +
Preference number: 4 (lower is better)
Translates to: VGCIVSITTQLDPCWVPARTPGP*HSPTYI
Trigger: AATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACG...GGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCCTCTTCCTGCACCGGTaGCTAACACTTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IKYSTQPATTKRERMLYSLFLHR*LTLQAA
Trigger: AGCAGCCTGAAGTGTTAGTCACCGGTGCAGGAAGAG...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATTGCTGGTTTGATTCCTaGTCACCCAACTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHCWFDS*SPNWTG
Trigger: CCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCA...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp TTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCCTATACCCAGCAAATCTTaGATAGATTGTGGAACAACA +
Preference number: 4 (lower is better)
Translates to: LLGSCQQLPHTWSGLAFPIPSKS*IDCGTT
Trigger: TGTTGTTCCACAATCTATGCAAGATTTGCTGGGTAT...AGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGGCTAAAACTTCAGACTaGTCTTCTAGCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVAKTSD*SSSRSS
Trigger: AGAAGATCTGCTAGAAGAGCAGTCTGAAGTTTTAGC...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCAGGTTTCTGGATTaGCAGATAGTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: EIFSDEATSIPARSRIVGCRFLD*QIVQHL
Trigger: AAGGTGCTGCACTATCTGGCAATCCAGAAACCTGCA...ACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCACTAACACTTCAGGCTaGTCCAGCAGGCAACTCACA +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELTNTSG*SSRQLT
Trigger: TGTGAGTTGCCTGCTGGAGCAGCCTGAAGTGTTAGT...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCGAACCACGAAGTGTTTaGACAGACCACGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILEPRSV*TDHECS
Trigger: GCTGCATTCGTGGTCTGTGCAAACACTTCGTGGTTC...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTTATTAGATTCACAATaGCTTTGTAACGCCCAACCT +
Preference number: 4 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCLLDSQ*LCNAQP
Trigger: AGGTTGGGCGTTACAAAGGCATTGTGAATCTAATAA...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATAAGGGCATCTATGTCTaGAGGTTGCTGAGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDKGIYV*RLLRPK
Trigger: TTTTGGCCTCAGCAACCTCCAGACATAGATGCCCTT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATTGGTTCCTGGGTTACTaGAATGTAGAGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDWFLGY*NVERFS
Trigger: GGAGAACCTCTCTACATTCCAGTAACCCAGGAACCA...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCCTTCTAGCAGGAATTaGCTTAGCTGTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETPSSRN*LSCFPG
Trigger: GCCTGGGAAACAGCTAAGCCAATTCCTGCTAGAAGG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CCA 90 bp GCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAATAGCTGCAGCCCTCTaGGCATTCACAAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: ATSIPARSRIVGCIVSITIAAAL*AFTNSL
Trigger: CAAGCTGTTTGTGAATGCCCAGAGGGCTGCAGCTAT...TGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp CTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTCAGCTTCCACACACCTaGAGTGGGTTGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LAQGLLVALFPLQPSWILQLPHT*SGLAFP
Trigger: AGGAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTG...AAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
3UTR CAA 72 bp AGGATAAATGCAGGCCCTCCGATCCACACAGCAGAGTaGACTATACTCAACATTTTGTGGCAACGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RINAGPPIHTAE*TILNILWQRGV
Trigger: GACACCACGTTGCCACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGATAATGATGAGTGACTaGGAACTTGAAGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVIMMSD*ELEVSK
Trigger: TTTGCTGACTTCAAGTTCTCAGTCACTCATCATTAT...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATCGTACACCAGGACCTTaGCATTCTCCTACATACATT +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDRTPGP*HSPTYI
Trigger: AATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACG...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATATGTCTGGAGGTTGCTaGGGCCAAAAATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHMSGGC*GQKYCC
Trigger: GCAGCAGTATTTTTGGCCTCAGCAACCTCCAGACAT...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGTATATTAGTGACATCTaGAGCACTTGTCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQYISDI*STCLFP
Trigger: GGGAAAAAGACAAGTGCTTCAGATGTCACTAATATA...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGCTCTTCCTGCACCGGTaGCTAACACTTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLLFLHR*LTLQAA
Trigger: AGCAGCCTGAAGTGTTAGTCACCGGTGCAGGAAGAG...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGGCCTTCTTCCTCAAATaGAGATCGTCCAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMAFFLK*RSSKNL
Trigger: GAGATTCTTGGACGATCTGCATTTGAGGAAGAAGGC...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCATCTTCTGTCATAGGTaGTGGTTCCTGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: DCWLHCFHYNPAGSLLGSIFCHR*WFLGYW
Trigger: CCAGTAACCCAGGAACCAGCACCTATGACAGAAGAT...GGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp TGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCTTCTACCCACATATTaGTTGGAATCTTCATCCGGG +
Preference number: 4 (lower is better)
Translates to: CWLHCFHYNPAGSLLGSCLLPTY*LESSSG
Trigger: CCCGGATGAAGATTCCAAGCAATATGTGGGTAGAAG...GCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp TTGCAGAGGTCTCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCTCAAAGAGTCTCCTTTaGCTTCTAGCAGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: LQRSQMKSSVMRPHLSRLSKSLL*LLAGIG
Trigger: GCCAATTCCTGCTAGAAGGCAAAGGAGACTCTTTGA...GAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGAGACCTCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATACTAACACTTCAGGCTaGTCCAGCAGGCAACTCACA +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHTNTSG*SSRQLT
Trigger: TGTGAGTTGCCTGCTGGAGCAGCCTGAAGTGTTAGT...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp ATTTGTAGGATAAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCGAACCACGAAGTGTTTaGACAGACCACGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: ICRINAGPPIHTAELTILEPRSV*TDHECS
Trigger: GCTGCATTCGTGGTCTGTGCAAACACTTCGTGGTTC...GAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTTATCCTACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGTTTTCCAGCATCCCCTaGATATATATTAGTGACATC +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVFSSIP*IYISDI
Trigger: GATGTCACTAATATATATCCAGGGGATGCTGGAAAA...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAAGGCACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCTTCTGTCATAGGTGCTaGTTCCTGGGTTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: KGTKNVLETTALLGSAGCFCHRC*FLGYWN
Trigger: ATTCCAGTAACCCAGGAACCAGCACCTATGACAGAA...GCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATTTCCAGGGAGCAACCTaGATTAGCTGCCTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDFQGAT*ISCLKR
Trigger: TCTTTTAAGGCAGCTAATCCAGGTTGCTCCCTGGAA...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCTTCCAGGGAGCAACCTaGATTAGCTGCCTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: CWLHCFHYNPAGSLLGSCFQGAT*ISCLKR
Trigger: TCTTTTAAGGCAGCTAATCCAGGTTGCTCCCTGGAA...GCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATTACCCACATATTGCTTaGAATCTTCATCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDYPHIA*NLHPGT
Trigger: AGTGCCCGGATGAAGATTCCAAGCAATATGTGGGTA...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGTCTCAGTTCCAAACTTaGCTTTTAGTGACCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMSQFQT*LLVTEL
Trigger: GAGCTCGGTCACTAAAAGCCAAGTTTGGAACTGAGA...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATCTGCCTTCTTTCCTCTaGGGAGCCCATTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHLPSFL*GAHSLQ
Trigger: TTGAAGAGAATGGGCTCCCCAGAGGAAAGAAGGCAG...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp ATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAATCCCTTCGGTCAGATaGGGCCATGTAGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: IYPGSLKDCWLHCFHYNPIPSVR*GHVVAK
Trigger: TTTAGCTACTACATGGCCTCATCTGACCGAAGGGAT...TGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCCATCATTATCCACAATaGTCCCTTCGGTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILHHYPQ*SLRSDE
Trigger: CTCATCTGACCGAAGGGATCATTGTGGATAATGATG...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCATCATTATCCACAATaGTCCCTTCGGTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETHHYPQ*SLRSDE
Trigger: CTCATCTGACCGAAGGGATCATTGTGGATAATGATG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR TCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCTCACCTAGCAAACACTaGGGATTCTCAGCTTTTCGA +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELSPSKH*GFSAFR
Trigger: TCGAAAAGCTGAGAATCCTCAGTGTTTGCTAGGTGA...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAGAATCTCATCAGTTaGCTCCTTTCGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMKNLIS*LLSTAN
Trigger: ATTTGCCGTCGAAAGGAGTCAACTGATGAGATTCTT...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTAAGAATCTCATCAGTTaGCTCCTTTCGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: EIFSDEATSIPARSRIVGKNLIS*LLSTAN
Trigger: ATTTGCCGTCGAAAGGAGTCAACTGATGAGATTCTT...ACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp GTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCGAAACTGATAATTTATaGATTGGAACTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: VGCIVSITTQLDPCWVPAETDNL*IGTDAG
Trigger: GCCGGCATCAGTTCCAATTCATAAATTATCAGTTTC...GGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGAGGCAGCACTGTCTCTaGAGCCACCAACGAGTAATG +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLRQHCL*SHQRVM
Trigger: CATTACTCGTTGGTGGCTTCAGAGACAGTGCTGCCT...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGCAGAAGAGAATGCGATaGACACCGTCCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLQKRMR*TPSCQC
Trigger: ACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTG...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATTCTTACCAGGCAATGTaGTCTTGGAGGAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDSYQAM*SWRKVI
Trigger: AATGACTTTCCTCCAAGAGCACATTGCCTGGTAAGA...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCAACAGCGTCACTGTGTaGAGCAGGGGCAATCACCAC +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERNSVTV*SRGNHH
Trigger: GTGGTGATTGCCCCTGCTGCACACAGTGACGCTGTT...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCGCCTTCTTCCTCAAATaGAGATCGTCCAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILAFFLK*RSSKNL
Trigger: GAGATTCTTGGACGATCTGCATTTGAGGAAGAAGGC...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCGGCACTCTGCATGCGTaGTCGAAGGTGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: STQCISTYTKLYYLHDSLGTLHA*SKVSPL
Trigger: GAGGGGGCTCACCTTCGAGCACGCATGCAGAGTGCC...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCTTCTACCCACATATTaGTTGGAATCTTCATCCGGG +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELLLPTY*LESSSG
Trigger: CCCGGATGAAGATTCCAAGCAATATGTGGGTAGAAG...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTGTGCAGCACCTTTTCTaGTTCCCGTGTATCATCAAA +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETVQHLF*FPCIIK
Trigger: TTTGATGATACACGGGAAGCAGAAAAGGTGCTGCAC...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR GCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCACACAAGGTAACAGGTaGCGAGCAAGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ATESDTFLLLDSQCLCNATQGNR*RARSAG
Trigger: ACCTGCAGACCTTGCTCGGCACCTGTTACCTTGTGT...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGCACAGGCAAGGTTTATaGTTCAGTATAACCATTTTT +
Preference number: 4 (lower is better)
Translates to: SLEAGHRRECDEHRPASVHRQGL*FSITIF
Trigger: AAAAATGGTTATACTGAAGCATAAACCTTGCCTGTG...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp ATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTAAGGGCATCTATGTCTaGAGGTTGCTGAGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: IVGCIVSITTQLDPCWVPKGIYV*RLLRPK
Trigger: TTTTGGCCTCAGCAACCTCCAGACATAGATGCCCTT...AGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGTTCTGTCATAGGTGCTaGTTCCTGGGTTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLVALFPLQPSWILAGFLFCHRC*FLGYWN
Trigger: ATTCCAGTAACCCAGGAACCAGCACCTATGACAGAA...CAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTTCTCAGTTCCAAACTTaGCTTTTAGTGACCGAGCTC +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETSQFQT*LLVTEL
Trigger: GAGCTCGGTCACTAAAAGCCAAGTTTGGAACTGAGA...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGCAATTCCTCCTCTGGTaGAGTCATAGCTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLQFLLW*SHSCSP
Trigger: AGGGCTGCAGCTATGACTCCACCAGAGGAGGAATTG...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCGCTGAGGCAGAGCTTTaGAGTAGGGAGCAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: STQCISTYTKLYYLHDSLAEAEL*SREQGA
Trigger: CGCGCCCTGCTCCCTACTCCAAAGCTCTGCCTCAGC...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGGCTCAAGCTTGGTGCTaGGAAGTCTTTCCGATGCTG +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLAQAWC*EVFPML
Trigger: CAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGC...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGCCGCCTGCATCTGCGTaGACCAGTAAGAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLPPASA*TSKNEV
Trigger: GACTTCATTCTTACTGGTCCACGCAGATGCAGGCGG...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
3UTR CAA 72 bp CCGATCCACACAGCAGAGTTGACTATACTCAACATTTaGTGGCAACGTGGTGTCAGTTTTCCCTGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: PIHTAELTILNI*WQRGVSFPCKG
Trigger: TCCCTTACAGGGAAAACTGACACCACGTTGCCACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATAAAGGAAATTTCATCTaGTTTCTCTTCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDKGNFI*FLFPCA
Trigger: GGCACATGGGAAGAGAAATCAGATGAAATTTCCTTT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp AAAGGCACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCATCCAATCTTTGATTTaGAGATATCCAGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: KGTKNVLETTALLGSAGCIQSLI*RYPADL
Trigger: CAGGTCTGCTGGATATCTTCAAATCAAAGATTGGAT...GCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATATCCAATCTTTGATTTaGAGATATCCAGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDIQSLI*RYPADL
Trigger: CAGGTCTGCTGGATATCTTCAAATCAAAGATTGGAT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCATCCCTTCGGTCAGATaGGGCCATGTAGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: IKYSTQPATTKRERMLYSIPSVR*GHVVAK
Trigger: TTTAGCTACTACATGGCCTCATCTGACCGAAGGGAT...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATCATCATTATCCACAATaGTCCCTTCGGTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHHHYPQ*SLRSDE
Trigger: CTCATCTGACCGAAGGGATCATTGTGGATAATGATG...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTGACCAATGTGGAGCTTaGATAGGATCCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETDQCGA*IGSKSE
Trigger: TTCTGATTTGGATCCTATTCAAGCTCCACATTGGTC...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR TCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATTCACCTAGCAAACACTaGGGATTCTCAGCTTTTCGA +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHSPSKH*GFSAFR
Trigger: TCGAAAAGCTGAGAATCCTCAGTGTTTGCTAGGTGA...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp ACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCTCACCTAGCAAACACTaGGGATTCTCAGCTTTTCGA +
Preference number: 4 (lower is better)
Translates to: TSIPARSRIVGCIVSITTSPSKH*GFSAFR
Trigger: TCGAAAAGCTGAGAATCCTCAGTGTTTGCTAGGTGA...GGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGTTTATGAATTGGAACTaGTGCCGGCTCTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMFMNWN*CRLCQF
Trigger: AAATTGACAGAGCCGGCATCAGTTCCAATTCATAAA...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGCAGATGGTGCAGACTTaGACTGATTGTAGAGATTAT +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMQMVQT*TDCRDY
Trigger: ATAATCTCTACAATCAGTTCAAGTCTGCACCATCTG...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCTTCACAAACAGCTTGTaGATGATCCTGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: TSIPARSRIVGCIVSITTFTNSL*MILPAC
Trigger: ACATGCTGGCAGGATCATTCACAAGCTGTTTGTGAA...GGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCTGCTGGTTTGATTCCTaGTCACCCAACTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERCWFDS*SPNWTG
Trigger: CCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCA...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATGTGCAGCACCTTTTCTaGTTCCCGTGTATCATCAAA +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHVQHLF*FPCIIK
Trigger: TTTGATGATACACGGGAAGCAGAAAAGGTGCTGCAC...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp ACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCGTGCAGCACCTTTTCTaGTTCCCGTGTATCATCAAA +
Preference number: 4 (lower is better)
Translates to: TSIPARSRIVGCIVSITTVQHLF*FPCIIK
Trigger: TTTGATGATACACGGGAAGCAGAAAAGGTGCTGCAC...GGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp ATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCATACCCACATATTGCTTaGAATCTTCATCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: IYPGSLKDCWLHCFHYNPYPHIA*NLHPGT
Trigger: AGTGCCCGGATGAAGATTCCAAGCAATATGTGGGTA...TGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGATAGCTGCAGCCCTCTaGGCATTCACAAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLIAAAL*AFTNSL
Trigger: CAAGCTGTTTGTGAATGCCCAGAGGGCTGCAGCTAT...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCGAACCGTCTTCTACTTaGTACAGCACTGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKREREPSST*YSTGLR
Trigger: CCTGAGGCCAGTGCTGTACCAAGTAGAAGACGGTTC...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp TTGCAGAGGTCTCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCTCGCTCAAGGATTGTTaGTTGCATTGTTTCCATTAC +
Preference number: 4 (lower is better)
Translates to: LQRSQMKSSVMRPHLSRLSLKDC*LHCFHY
Trigger: GTAATGGAAACAATGCAACCAACAATCCTTGAGCGA...GAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGAGACCTCTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCAAAGGAAATTTCATCTaGTTTCTCTTCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILKGNFI*FLFPCA
Trigger: GGCACATGGGAAGAGAAATCAGATGAAATTTCCTTT...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCAGGACATCCAATCTTTaGTTTGAAGATATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DCWLHCFHYNPAGSLLGSRTSNL*FEDIQQ
Trigger: CTGCTGGATATCTTCAAATCAAAGATTGGATGTCCT...GGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGTCTGGAGGTTGCTaGGGCCAAAAATACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERMSGGC*GQKYCC
Trigger: GCAGCAGTATTTTTGGCCTCAGCAACCTCCAGACAT...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCATCCCTTCGGTCAGATaGGGCCATGTAGTAGCTAAA +
Preference number: 4 (lower is better)
Translates to: ATESDTFLLLDSQCLCNAIPSVR*GHVVAK
Trigger: TTTAGCTACTACATGGCCTCATCTGACCGAAGGGAT...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCGGCTCTGTCAATTTTaGCAAAGCATGAGTTATATC +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELRLCQF*QSMSYI
Trigger: GATATAACTCATGCTTTGTCAAAATTGACAGAGCCG...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCGGCTCTGTCAATTTTaGCAAAGCATGAGTTATATC +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETRLCQF*QSMSYI
Trigger: GATATAACTCATGCTTTGTCAAAATTGACAGAGCCG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR GCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATATACCCAGCAAATCTTaGATAGATTGTGGAACAACA +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDIPSKS*IDCGTT
Trigger: TGTTGTTCCACAATCTATGCAAGATTTGCTGGGTAT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGATACCCAGCAAATCTTaGATAGATTGTGGAACAACA +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMIPSKS*IDCGTT
Trigger: TGTTGTTCCACAATCTATGCAAGATTTGCTGGGTAT...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTTATCAGCAGTTTCTTTaGCTTCTTCCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETYQQFL*LLPQMQ
Trigger: CTGCATTTGAGGAAGAAGGCAAAGAAACTGCTGATA...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR GCA 90 bp GATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTATCAGCAGTTTCTTTaGCTTCTTCCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: DCWLHCFHYNPAGSLLGSYQQFL*LLPQMQ
Trigger: CTGCATTTGAGGAAGAAGGCAAAGAAACTGCTGATA...GGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp ACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCAGAGGTTCTCCATTATaGAGCAGTGTAAGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TSIPARSRIVGCIVSITTRGSPL*SSVSFP
Trigger: TGGGAAACTTACACTGCTGCATAATGGAGAACCTCT...GGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR GCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGATCTTCTGTCATAGGTaGTGGTTCCTGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLIFCHR*WFLGYW
Trigger: CCAGTAACCCAGGAACCAGCACCTATGACAGAAGAT...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTGCTAAAACTTCAGACTaGTCTTCTAGCAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETAKTSD*SSSRSS
Trigger: AGAAGATCTGCTAGAAGAGCAGTCTGAAGTTTTAGC...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCAGGCAATGTGCTCTTaGAGGAAAGTCATTATTCAT +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETQAMCS*RKVIIH
Trigger: ATGAATAATGACTTTCCTCCAAGAGCACATTGCCTG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGGTGAGTGTACTGATTTaGCACTTTTCTAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMVSVLI*HFSKMN
Trigger: GTTCATCTTAGAAAAGTGCCAAATCAGTACACTCAC...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCGTGAGTGTACTGATTTaGCACTTTTCTAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: CWLHCFHYNPAGSLLGSCVSVLI*HFSKMN
Trigger: GTTCATCTTAGAAAAGTGCCAAATCAGTACACTCAC...GCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCTCTAACAGACCAATGTaGAGCTTGAATAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELSNRPM*SLNRIQ
Trigger: TTGGATCCTATTCAAGCTCCACATTGGTCTGTTAGA...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACGGCTCTGTCAATTTTaGCAAAGCATGAGTTATATC +
Preference number: 4 (lower is better)
Translates to: PHLSRLAQGLLVALFPLQRLCQF*QSMSYI
Trigger: GATATAACTCATGCTTTGTCAAAATTGACAGAGCCG...TTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp ATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTTTTATGAATTGGAACTaGTGCCGGCTCTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: IVGCIVSITTQLDPCWVPFMNWN*CRLCQF
Trigger: AAATTGACAGAGCCGGCATCAGTTCCAATTCATAAA...AGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp AAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCAACATTTTGTGCAGATGGTGCAGACTTaGACTGATTGTAGAGATTAT +
Preference number: 4 (lower is better)
Translates to: KCRPSDPHSRVDYTQHFVQMVQT*TDCRDY
Trigger: ATAATCTCTACAATCAGTTCAAGTCTGCACCATCTG...CACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTTATATTAGTGACATCTaGAGCACTTGTCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETYISDI*STCLFP
Trigger: GGGAAAAAGACAAGTGCTTCAGATGTCACTAATATA...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR TCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATTCCACACAGCAGAGTTaGCTATACTCAACATTTTGT +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHSTQQS*LYSTFC
Trigger: ACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGA...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTTCCTGCCAGAGGTGTaGCACTCCTTTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: STQCISTYTKLYYLHDSLFLPEV*HSFQPS
Trigger: GGAGGGTTGAAAGGAGTGGCACACCTCTGGCAGGAA...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCTCAAGAACAAATTCCTaGCAGAGGTGTGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERSRTNS*QRCATP
Trigger: AGGAGTGGCACACCTCTGGCAGGAATTTGTTCTTGA...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATTTTCCCCTCATCACGTaGCTTCTTTCTTTCAATACA +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHFPLIT*LLSFNT
Trigger: TGTATTGAAAGAAAGAAGGCACGTGATGAGGGGAAA...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTCAAAGAGTCTCCTTTaGCTTCTAGCAGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLSKSLL*LLAGIG
Trigger: GCCAATTCCTGCTAGAAGGCAAAGGAGACTCTTTGA...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCTGCAGGTTTCTGGATTaGCAGATAGTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERCRFLD*QIVQHL
Trigger: AAGGTGCTGCACTATCTGGCAATCCAGAAACCTGCA...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATCCAAGACTGTATTTTTaGAAGTGCTATTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDPRLYF*KCYSLL
Trigger: AAGTAGAGAATAGCACTTGCAAAAATACAGTCTTGG...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCTATACCCTTTTCGAGTaGCTTTCCCAAAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: IKYSTQPATTKRERMLYSYTLFE*LSQRVS
Trigger: GGAAACTCTTTGGGAAAGCCACTCGAAAAGGGTATA...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp ATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTCAGGCAATGTGCTCTTaGAGGAAAGTCATTATTCAT +
Preference number: 4 (lower is better)
Translates to: IVGCIVSITTQLDPCWVPQAMCS*RKVIIH
Trigger: ATGAATAATGACTTTCCTCCAAGAGCACATTGCCTG...AGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCGTGAGTGTACTGATTTaGCACTTTTCTAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: YTKAISRAEISQQLKPILVSVLI*HFSKMN
Trigger: GTTCATCTTAGAAAAGTGCCAAATCAGTACACTCAC...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCAACATTTTGTGTCTAACAGACCAATGTaGAGCTTGAATAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: KCRPSDPHSRVDYTQHFVSNRPM*SLNRIQ
Trigger: TTGGATCCTATTCAAGCTCCACATTGGTCTGTTAGA...CACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp TCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTTTTTCCAGCATCCCCTaGATATATATTAGTGACATC +
Preference number: 4 (lower is better)
Translates to: SDEIFSDEATSIPARSRIFSSIP*IYISDI
Trigger: GATGTCACTAATATATATCCAGGGGATGCTGGAAAA...AATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTTCCAGGGAGCAACCTaGATTAGCTGCCTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLFQGAT*ISCLKR
Trigger: TCTTTTAAGGCAGCTAATCCAGGTTGCTCCCTGGAA...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAGTGCAAAACTTTACTaGAATGGGATATTATCTGCT +
Preference number: 4 (lower is better)
Translates to: LPSRGHLATQTQDILSSMSAKLY*NGILSA
Trigger: AGCAGATAATATCCCATTCCAGTAAAGTTTTGCACT...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGGACACAGCTCAAGCTTaGTGCTGGGAAGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: LNALAHIPNYTICMTVSRDTAQA*CWEVFP
Trigger: CGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTC...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTATACTCAACATTTTGTaGCAACGTGGTGTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETILNIL*QRGVSF
Trigger: AAAACTGACACCACGTTGCCACAAAATGTTGAGTAT...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCAATATAATCCCGGGGTaGATACCACCTCACAAAATC +
Preference number: 4 (lower is better)
Translates to: ATESDTFLLLDSQCLCNANIIPG*IPPHKI
Trigger: GATTTTGTGAGGTGGTATTCACCCCGGGATTATATT...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCTCTGGATTGGGGAAGTaGAAAACTTTACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: ATESDTFLLLDSQCLCNASGLGK*KTLLEW
Trigger: CCATTCCAGTAAAGTTTTGCACTTCCCCAATCCAGA...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGACAGCTCAAGCTTGGTaGTGGGAAGTCTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: LNALAHIPNYTICMTVSRTAQAW*WEVFPM
Trigger: CATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGT...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCTATACCCTTTTCGAGTaGCTTTCCCAAAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ATESDTFLLLDSQCLCNAYTLFE*LSQRVS
Trigger: GGAAACTCTTTGGGAAAGCCACTCGAAAAGGGTATA...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCCAGGCAATGTGCTCTTaGAGGAAAGTCATTATTCAT +
Preference number: 4 (lower is better)
Translates to: IKYSTQPATTKRERMLYSQAMCS*RKVIIH
Trigger: ATGAATAATGACTTTCCTCCAAGAGCACATTGCCTG...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGTAGTAGCTAAATaGAGTTCACTAATAGGATCT +
Preference number: 4 (lower is better)
Translates to: KITKQRPSSHTDTRHLELHVVAK*SSLIGS
Trigger: AGATCCTATTAGTGAACTCCATTTAGCTACTACATG...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCATGTAGTAGCTAAATaGAGTTCACTAATAGGATCT +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETHVVAK*SSLIGS
Trigger: AGATCCTATTAGTGAACTCCATTTAGCTACTACATG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CCA 90 bp AAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCAACATTTTGTGTTTTCCAGCATCCCCTaGATATATATTAGTGACATC +
Preference number: 4 (lower is better)
Translates to: KCRPSDPHSRVDYTQHFVFSSIP*IYISDI
Trigger: GATGTCACTAATATATATCCAGGGGATGCTGGAAAA...CACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGCCTTCTAGCAGGAATTaGCTTAGCTGTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNALAHIPNYTICMTVSRPSSRN*LSCFPG
Trigger: GCCTGGGAAACAGCTAAGCCAATTCCTGCTAGAAGG...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTAGTGCAAAACTTTACTaGAATGGGATATTATCTGCT +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETSAKLY*NGILSA
Trigger: AGCAGATAATATCCCATTCCAGTAAAGTTTTGCACT...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CCA 90 bp GCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAAGTGCAAAACTTTACTaGAATGGGATATTATCTGCT +
Preference number: 4 (lower is better)
Translates to: ATSIPARSRIVGCIVSITSAKLY*NGILSA
Trigger: AGCAGATAATATCCCATTCCAGTAAAGTTTTGCACT...TGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCCAATTTCTTGTCTTCTaGATTGGGGAAGTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: IKYSTQPATTKRERMLYSQFLVF*IGEVQN
Trigger: GTTTTGCACTTCCCCAATCCAGAAGACAAGAAATTG...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTAGAGCATATACAATTTaGATATTTGCAGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KQRPSSHTDTRHLELHETRAYTI*IFAEVS
Trigger: TGAGACCTCTGCAAATATCCAAATTGTATATGCTCT...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp GCCACAGAAAGCGACACTTTCCTTTTATTAGATTCACAATGCCTTTGTAACGCCAGGACATCCAATCTTTaGTTTGAAGATATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ATESDTFLLLDSQCLCNARTSNL*FEDIQQ
Trigger: CTGCTGGATATCTTCAAATCAAAGATTGGATGTCCT...GGCGTTACAAAGGCATTGTGAATCTAATAAAAGGAAAGTGTCGCTTTCTGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR TCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGGAAACTGATAATTTATaGATTGGAACTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLETDNL*IGTDAG
Trigger: GCCGGCATCAGTTCCAATTCATAAATTATCAGTTTC...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGCAAACAGCTTGTGAATaGTCCTGCCAGCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRQTACE*SCQHVL
Trigger: GAGGACATGCTGGCAGGATCATTCACAAGCTGTTTG...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCAAGATGACCACCAGGTaGTTGAATAGACAGAATGTC +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERKMTTR*LNRQNV
Trigger: GACATTCTGTCTATTCAATCACCTGGTGGTCATCTT...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTATCAGCAGTTTCTTTaGCTTCTTCCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: YFIKYSTQPATTKRERMLYQQFL*LLPQMQ
Trigger: CTGCATTTGAGGAAGAAGGCAAAGAAACTGCTGATA...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGAAGGGCATCTATGTCTaGAGGTTGCTGAGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: LNALAHIPNYTICMTVSRKGIYV*RLLRPK
Trigger: TTTTGGCCTCAGCAACCTCCAGACATAGATGCCCTT...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATCATGTAGTAGCTAAATaGAGTTCACTAATAGGATCT +
Preference number: 4 (lower is better)
Translates to: TKNVLETTALLGSAGCKHHVVAK*SSLIGS
Trigger: AGATCCTATTAGTGAACTCCATTTAGCTACTACATG...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR GCA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGTCAAGAACAAATTCCTaGCAGAGGTGTGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRSRTNS*QRCATP
Trigger: AGGAGTGGCACACCTCTGGCAGGAATTTGTTCTTGA...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCTTTCCCCTCATCACGTaGCTTCTTTCTTTCAATACA +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERFPLIT*LLSFNT
Trigger: TGTATTGAAAGAAAGAAGGCACGTGATGAGGGGAAA...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCATCTTCTGTCATAGGTaGTGGTTCCTGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: STQCISTYTKLYYLHDSLIFCHR*WFLGYW
Trigger: CCAGTAACCCAGGAACCAGCACCTATGACAGAAGAT...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CCA 90 bp GAGAAAATGATCTGCTCTAAGAGCATATACAATTTGGATATTTGCAGAGGTCTCTCTCAGTTCCAAACTTaGCTTTTAGTGACCGAGCTC +
Preference number: 4 (lower is better)
Translates to: EKMICSKSIYNLDICRGLSQFQT*LLVTEL
Trigger: GAGCTCGGTCACTAAAAGCCAAGTTTGGAACTGAGA...GAGACCTCTGCAAATATCCAAATTGTATATGCTCTTAGAGCAGATCATTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TTAGTAAGCAAAATATGCTACCAAAGAAGATGGTCACTGCAATGTTTCTCTGACTCTGACCTTTTCGAGTaGCTTTCCCAAAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LVSKICYQRRWSLQCFSDSDLFE*LSQRVS
Trigger: GGAAACTCTTTGGGAAAGCCACTCGAAAAGGTCAGA...GTCAGAGAAACATTGCAGTGACCATCTTCTTTGGTAGCATATTTTGCTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425393.1
CDS-3UTR TCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATAATGATGAGTGACTaGGAACTTGAAGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERIMMSD*ELEVSK
Trigger: TTTGCTGACTTCAAGTTCTCAGTCACTCATCATTAT...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCCGTACACCAGGACCTTaGCATTCTCCTACATACATT +
Preference number: 4 (lower is better)
Translates to: STQCISTYTKLYYLHDSLRTPGP*HSPTYI
Trigger: AATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACG...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGAAGAATCTCATCAGTTaGCTCCTTTCGACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LNALAHIPNYTICMTVSRKNLIS*LLSTAN
Trigger: ATTTGCCGTCGAAAGGAGTCAACTGATGAGATTCTT...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCTATATTAGTGACATCTaGAGCACTTGTCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ILYFIKYSTQPATTKRERYISDI*STCLFP
Trigger: GGGAAAAAGACAAGTGCTTCAGATGTCACTAATATA...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGTTGCACACTTGCTGCTaGTATATAGAACCACGAAGT +
Preference number: 4 (lower is better)
Translates to: LNALAHIPNYTICMTVSRLHTCC*YIEPRS
Trigger: ACTTCGTGGTTCTATATATCAGCAGCAAGTGTGCAA...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGTCTTACCAGGCAATGTaGTCTTGGAGGAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: LNALAHIPNYTICMTVSRSYQAM*SWRKVI
Trigger: AATGACTTTCCTCCAAGAGCACATTGCCTGGTAAGA...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp GAGAAAATGATCTGCTCTAAGAGCATATACAATTTGGATATTTGCAGAGGTCTCTCTGGATTGGGGAAGTaGAAAACTTTACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: EKMICSKSIYNLDICRGLSGLGK*KTLLEW
Trigger: CCATTCCAGTAAAGTTTTGCACTTCCCCAATCCAGA...GAGACCTCTGCAAATATCCAAATTGTATATGCTCTTAGAGCAGATCATTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR TCA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGAAGATGACCACCAGGTaGTTGAATAGACAGAATGTC +
Preference number: 4 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRKMTTR*LNRQNV
Trigger: GACATTCTGTCTATTCAATCACCTGGTGGTCATCTT...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TTAGTAAGCAAAATATGCTACCAAAGAAGATGGTCACTGCAATGTTTCTCTGACACCCCTAGCAAATATTaGGAACTCAAAGTTCCTAAC +
Preference number: 4 (lower is better)
Translates to: LVSKICYQRRWSLQCFSDTPSKY*ELKVPN
Trigger: GTTAGGAACTTTGAGTTCTCAATATTTGCTAGGGGT...GTCAGAGAAACATTGCAGTGACCATCTTCTTTGGTAGCATATTTTGCTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425393.1
CDS-3UTR TCA 90 bp TTAGTAAGCAAAATATGCTACCAAAGAAGATGGTCACTGCAATGTTTCTCTGACTCACCATCACAAAGCTaGAAACCCCTAGCAAATATT +
Preference number: 4 (lower is better)
Translates to: LVSKICYQRRWSLQCFSDSPSQS*KPLANI
Trigger: AATATTTGCTAGGGGTTTTCAGCTTTGTGATGGTGA...GTCAGAGAAACATTGCAGTGACCATCTTCTTTGGTAGCATATTTTGCTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425393.1
CDS-3UTR CCA 90 bp GAGAAAATGATCTGCTCTAAGAGCATATACAATTTGGATATTTGCAGAGGTCTCCAATTTCTTGTCTTCTaGATTGGGGAAGTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: EKMICSKSIYNLDICRGLQFLVF*IGEVQN
Trigger: GTTTTGCACTTCCCCAATCCAGAAGACAAGAAATTG...GAGACCTCTGCAAATATCCAAATTGTATATGCTCTTAGAGCAGATCATTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CCA 90 bp TTAGTAAGCAAAATATGCTACCAAAGAAGATGGTCACTGCAATGTTTCTCTGACTGCTACCAAAGAAGATaGTCACTGCAATGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVSKICYQRRWSLQCFSDCYQRR*SLQCFS
Trigger: AGAGAAACATTGCAGTGACCATCTTCTTTGGTAGCA...GTCAGAGAAACATTGCAGTGACCATCTTCTTTGGTAGCATATTTTGCTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425393.1
CDS-3UTR TCA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGAGGACATCCAATCTTTaGTTTGAAGATATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRRTSNL*FEDIQQ
Trigger: CTGCTGGATATCTTCAAATCAAAGATTGGATGTCCT...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR TCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCATTATACTATCTGCATaGCAGTCTCTAGGTACCAAG +
Preference number: 4 (lower is better)
Translates to: STQCISTYTKLYYLHDSLIILSA*QSLGTK
Trigger: CTTGGTACCTAGAGACTGTCATGCAGATAGTATAAT...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR GCA 90 bp TTAGTAAGCAAAATATGCTACCAAAGAAGATGGTCACTGCAATGTTTCTCTGACAAAGAAGATGGTCACTaGAATGTTTCTCTGACCAAA +
Preference number: 4 (lower is better)
Translates to: LVSKICYQRRWSLQCFSDKEDGH*NVSLTK
Trigger: TTTGGTCAGAGAAACATTGCAGTGACCATCTTCTTT...GTCAGAGAAACATTGCAGTGACCATCTTCTTTGGTAGCATATTTTGCTTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425393.1
CDS-3UTR CCA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCCAATTTCTTGTCTTCTaGATTGGGGAAGTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: STQCISTYTKLYYLHDSLQFLVF*IGEVQN
Trigger: GTTTTGCACTTCCCCAATCCAGAAGACAAGAAATTG...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS TCA 90 bp GAGCTTTGGAGTAGGGAGCAGGGCGCGGCACAGTGGTGCGCAAAATaGATTCCCGGCCAGCAGGGGGTGGGAAGTCTGACACGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: ELWSREQGAAQWCAK*IPGQQGVGSLTRSS
Trigger: AGAACTCCGTGTCAGACTTCCCACCCCCTGCTGGCCGGGAATTCATTTTGCGCACCACTGTGCCGCGCCCTGCTCCCTACTCCAAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000497080.1
ENST00000539493.2
CDS-3UTR CAA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGGATCTGGGGGTCCACTaGCTAATCCTGGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALDLGVH*LILESE
Trigger: TTCTGATTCCAGGATTAGCAAGTGGACCCCCAGATC...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAAGCTCCTGGGAGCAGTaGTCTACCAGGACACACCTG +
Preference number: 5 (lower is better)
Translates to: TTQLDPCWVPASSFHTPGSSWEQ*STRTHL
Trigger: CAGGTGTGTCCTGGTAGACAACTGCTCCCAGGAGCT...TCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp ACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGACACACCTGGAGTGGGTaGGCTTTTCCTGCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: TTQLDPCWVPASSFHTPGHTWSG*AFPAGL
Trigger: CAAACCTGCAGGAAAAGCCAACCCACTCCAGGTGTG...TCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGGAACTCAGAAGAAGGTaGCACTTAGATTCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALELRRR*HLDSLR
Trigger: TCTCAGCGAATCTAAGTGCAACCTTCTTCTGAGTTC...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCACCATTTGTGGTGAATTaGCACAAAGAGTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEAPFVVN*HKEWHL
Trigger: CAGGTGCCACTCTTTGTGCAAATTCACCACAAATGG...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS GCA 90 bp ATGAATTCCCGGCCAGCAGGGGGTGGGAAGTCTGACACGGAGTTCTaGCTTCTTTCCTCTGGGGAGCCCATTCTCTTCAATTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: MNSRPAGGGKSDTEF*LLSSGEPILFNSSS
Trigger: AGAGGAGGAATTGAAGAGAATGGGCTCCCCAGAGGAAAGAAGGCAGAACTCCGTGTCAGACTTCCCACCCCCTGCTGGCCGGGAATTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000497080.1
ENST00000539493.2
CDS-3UTR CAA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCATCGTACACCAGGACCTaGACATTCTCCTACATACAT +
Preference number: 5 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEASYTRT*TFSYIH
Trigger: ATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACGA...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGAGACCAATGTGGAGCTaGAATAGGATCCAAATCAGA +
Preference number: 5 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALRPMWS*NRIQIR
Trigger: TCTGATTTGGATCCTATTCAAGCTCCACATTGGTCT...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGCTGATAATTTATGAATaGGAACTGATGCCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALLIIYE*ELMPAL
Trigger: CAGAGCCGGCATCAGTTCCAATTCATAAATTATCAG...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTCCTTTCAGCACCACATaGCCCTTTTCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: QLDPCWVPASSFHTPGVGPFSTT*PFSSIT
Trigger: GGTGATTGATGAAAAGGGCAATGTGGTGCTGAAAGG...ACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGCGACACAGCTCAAGCTaGGTGCTGGGAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SLEAGHRRECDEHRPASVRHSSS*VLGSLS
Trigger: GGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCG...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAACCCAGCTGGATCCTaGCTGGGTTCCTGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VGCIVSITTQLDPCWVPANPAGS*LGSCQQ
Trigger: CTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTT...GGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS TCA 90 bp GGTGGAGTCATAGCTGCAGCCCTCTGGGCATTCACAAACAGCTTGTaGATGATCCTGCCAGCATGTCCTCTTCCTGCACCGGTGACTAAC +
Preference number: 5 (lower is better)
Translates to: GGVIAAALWAFTNSL*MILPACPLPAPVTN
Trigger: GTTAGTCACCGGTGCAGGAAGAGGACATGCTGGCAGGATCATTCACAAGCTGTTTGTGAATGCCCAGAGGGCTGCAGCTATGACTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000487003.5
ENST00000539493.2
CDS-3UTR CAA 90 bp TGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCCAAGAATCTCATCAGTaGACTCCTTTCGACGGCAAA +
Preference number: 5 (lower is better)
Translates to: WILAGFLPAASTHLEWVGQESHQ*TPFDGK
Trigger: TTTGCCGTCGAAAGGAGTCAACTGATGAGATTCTTG...GCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGCCGGCTCTGTCAATTTaGACAAAGCATGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALPALSI*TKHELY
Trigger: ATATAACTCATGCTTTGTCAAAATTGACAGAGCCGG...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGGCACCAAATGGTAACTaGCCAAACTCCAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SLEAGHRRECDEHRPASVAPNGN*PNSKPP
Trigger: TGGAGGCTTGGAGTTTGGCAAGTTACCATTTGGTGC...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TCTCCAGGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAATATCAGCAGTTTCTTaGCCTTCTTCCTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: SPGPPRFSLVPSLPQEEAISAVS*PSSSNA
Trigger: TGCATTTGAGGAAGAAGGCAAAGAAACTGCTGATAT...TGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCCTGATAATTTATGAATaGGAACTGATGCCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: WILAGFLPAASTHLEWVGLIIYE*ELMPAL
Trigger: CAGAGCCGGCATCAGTTCCAATTCATAAATTATCAG...GCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp GGACCTCCCAGGTTCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGTTCGGATTTTCTTCTTaGCAGTGTGTACCATATTTG +
Preference number: 5 (lower is better)
Translates to: GPPRFSLVPSLPQEEAALFGFSS*QCVPYL
Trigger: CAAATATGGTACACACTGCAAAGAAGAAAATCCGAA...CAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGAACCTGGGAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGATCTGGGGGTCCACTaGCTAATCCTGGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: ITTQLDPCWVPASSFHTPDLGVH*LILESE
Trigger: TTCTGATTCCAGGATTAGCAAGTGGACCCCCAGATC...AGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTCTACCCACATATTGCTaGGAATCTTCATCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: GHRRECDEHRPASVRTECLPTYC*ESSSGH
Trigger: GTGCCCGGATGAAGATTCCAAGCAATATGTGGGTAG...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS TCA 90 bp TCTCCCTGGTACCTTCCCTCCCTCAGGAGGAGGCAGCACTGTCTCTaGAGCCACCAACGAGTAATGCTAGAAGAATCAGAAGAAGGAAGT +
Preference number: 5 (lower is better)
Translates to: SPWYLPSLRRRQHCL*SHQRVMLEESEEGS
Trigger: ACTTCCTTCTTCTGATTCTTCTAGCATTACTCGTTGGTGGCTTCAGAGACAGTGCTGCCTCCTCCTGAGGGAGGGAAGGTACCAGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS GCA 90 bp CTGCCAGCATGTCCTCTTCCTGCACCGGTGACTAACACTTCAGGCTaGTCCAGCAGGCAACTCACAAACCTTTCAAGATCTTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LPACPLPAPVTNTSG*SSRQLTNLSRSSFS
Trigger: GGAAAAGGAAGATCTTGAAAGGTTTGTGAGTTGCCTGCTGGAGCAGCCTGAAGTGTTAGTCACCGGTGCAGGAAGAGGACATGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CCA 90 bp CCTTCTTTCCTCTGGGGAGCCCATTCTCTTCAATTCCTCCTCTGGTaGAGTCATAGCTGCAGCCTCATCAGAAGATTCAGTCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PSFLWGAHSLQFLLW*SHSCSLIRRFSQPL
Trigger: CAGAGGCTGACTGAATCTTCTGATGAGGCTGCAGCTATGACTCCACCAGAGGAGGAATTGAAGAGAATGGGCTCCCCAGAGGAAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS-3UTR CAA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGCCTGGAATCAGAAAGTaGTTTTCCCATCGGAAACGC +
Preference number: 5 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQPGIRK*FSHRKR
Trigger: GCGTTTCCGATGGGAAAACAACTTTCTGATTCCAGG...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTCCTGGAATCAGAAAGTaGTTTTCCCATCGGAAACGC +
Preference number: 5 (lower is better)
Translates to: GHRRECDEHRPASVRTECPGIRK*FSHRKR
Trigger: GCGTTTCCGATGGGAAAACAACTTTCTGATTCCAGG...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGAGGACGGAGTGTCCTTTCAGCACCACATaGCCCTTTTCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: GHRRECDEHRPASVRTECPFSTT*PFSSIT
Trigger: GGTGATTGATGAAAAGGGCAATGTGGTGCTGAAAGG...ACACTCCGTCCTCACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTGGAGTGGGTTGGCTTTTCAGTCTAAAGTCCTCTTaGGTGAGAACACTGTACATC +
Preference number: 5 (lower is better)
Translates to: PCWVPASSFHTPGVGWLFSLKSS*VRTLYI
Trigger: GATGTACAGTGTTCTCACCAAAGAGGACTTTAGACT...GAAAAGCCAACCCACTCCAGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp GGGAGCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATCGGCTCGCTCAAGGATaGTTGGTTGCATTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: GSKQRPSSHTDTRHLELHRLAQG*LVALFP
Trigger: TGGAAACAATGCAACCAACAATCCTTGAGCGAGCCG...ATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS TCA 90 bp TCCATATCTGAGAGCAGACAGGCACTCTGCATGCGTGCTCGAAGGTaGGCCCCCTCTGCCGATGTACCTAATTTAGCTAAAACTTCAGAC +
Preference number: 5 (lower is better)
Translates to: SISESRQALCMRARR*APSADVPNLAKTSD
Trigger: GTCTGAAGTTTTAGCTAAATTAGGTACATCGGCAGAGGGGGCTCACCTTCGAGCACGCATGCAGAGTGCCTGTCTGCTCTCAGATATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS GCA 90 bp TGGGGAGCCCATTCTCTTCAATTCCTCCTCTGGTGGAGTCATAGCTaGAGCCTCATCAGAAGATTCAGTCAGCCTCTGGGCATTCACAAA +
Preference number: 5 (lower is better)
Translates to: WGAHSLQFLLWWSHS*SLIRRFSQPLGIHK
Trigger: TTTGTGAATGCCCAGAGGCTGACTGAATCTTCTGATGAGGCTGCAGCTATGACTCCACCAGAGGAGGAATTGAAGAGAATGGGCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS-3UTR CAA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGCAAGAATCTCATCAGTaGACTCCTTTCGACGGCAAA +
Preference number: 5 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQQESHQ*TPFDGK
Trigger: TTTGCCGTCGAAAGGAGTCAACTGATGAGATTCTTG...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GGGAGCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATCCTGGAATCAGAAAGTaGTTTTCCCATCGGAAACGC +
Preference number: 5 (lower is better)
Translates to: GSKQRPSSHTDTRHLELHPGIRK*FSHRKR
Trigger: GCGTTTCCGATGGGAAAACAACTTTCTGATTCCAGG...ATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp AAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCAACATTTTGTGCTTGAGACCACTGCCTaGTTAGGCTCAGCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KCRPSDPHSRVDYTQHFVLETTA*LGSAGC
Trigger: GCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAG...CACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS TCA 90 bp TCATCAGAAGATTCAGTCAGCCTCTGGGCATTCACAAACAGCTTGTaGATGATCCTGCCAGCATGTCCTCTTCCTGCACCGGTGACTAAC +
Preference number: 5 (lower is better)
Translates to: SSEDSVSLWAFTNSL*MILPACPLPAPVTN
Trigger: GTTAGTCACCGGTGCAGGAAGAGGACATGCTGGCAGGATCATTCACAAGCTGTTTGTGAATGCCCAGAGGCTGACTGAATCTTCTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS-3UTR CAA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCATACTGCTGCCAATCTaGAAGTACATAGGTAAATCG +
Preference number: 5 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCILLPI*KYIGKS
Trigger: CGATTTACCTATGTACTTCAAGATTGGCAGCAGTAT...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATGCACCAAATGGTAACTaGCCAAACTCCAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PARSRIVGCIVSITTQLDAPNGN*PNSKPP
Trigger: TGGAGGCTTGGAGTTTGGCAAGTTACCATTTGGTGC...ATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGAGACCAATGTGGAGCTaGAATAGGATCCAAATCAGA +
Preference number: 5 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQRPMWS*NRIQIR
Trigger: TCTGATTTGGATCCTATTCAAGCTCCACATTGGTCT...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATCGACACAGCTCAAGCTaGGTGCTGGGAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: TKNVLETTALLGSAGCKHRHSSS*VLGSLS
Trigger: GGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCG...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATAGAACCACGAAGTGTTaGCACAGACCACGAATGCAG +
Preference number: 5 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDRTTKC*HRPRMQ
Trigger: CTGCATTCGTGGTCTGTGCAAACACTTCGTGGTTCT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCAGCAGCTTCCACACACCTCAGACACAAGACATCTaGAGCTCCATGAAACTAGAA +
Preference number: 5 (lower is better)
Translates to: ITTQLDPCWVPASSFHTPQTQDI*SSMKLE
Trigger: TTCTAGTTTCATGGAGCTCAAGATGTCTTGTGTCTG...AGGTGTGTGGAAGCTGCTGGCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS GCA 90 bp TGCAGCACCTTTTCTGCTTCCCGTGTATCATCAAAGAGTCTCCTTTaGCTTCTAGCAGGAATTGGCTTAGCTGTTTCCCAGGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: CSTFSASRVSSKSLL*LLAGIGLAVSQAST
Trigger: GGTAGAAGCCTGGGAAACAGCTAAGCCAATTCCTGCTAGAAGGCAAAGGAGACTCTTTGATGATACACGGGAAGCAGAAAAGGTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS-3UTR CAA 90 bp CTTTCCGATGCTGGTTTGATTCCTGATCACCCAACTGGACAGGGCCCTCTCCAGCATCCAATCTTTGATTaGAAGATATCCAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: LSDAGLIPDHPTGQGPLQHPIFD*KISSRP
Trigger: AGGTCTGCTGGATATCTTCAAATCAAAGATTGGATG...CTGGAGAGGGCCCTGTCCAGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp AGCCTAGAGGCTGGTCACAGAAGAGAATGCGATGAACACCGTCCTGCCAGTGTGATATCAGCAGTTTCTTaGCCTTCTTCCTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: SLEAGHRRECDEHRPASVISAVS*PSSSNA
Trigger: TGCATTTGAGGAAGAAGGCAAAGAAACTGCTGATAT...CACACTGGCAGGACGGTGTTCATCGCATTCTCTTCTGTGACCAGCCTCTAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCTACCCACATATTGCTaGGAATCTTCATCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: KQRPSSHTDTRHLELHETLPTYC*ESSSGH
Trigger: GTGCCCGGATGAAGATTCCAAGCAATATGTGGGTAG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CAA 90 bp TCTCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGAGCTTCTACCCACATATaGCTTGGAATCTTCATCCGG +
Preference number: 5 (lower is better)
Translates to: SQMKSSVMRPHLSRLAQGASTHI*LGIFIR
Trigger: CCGGATGAAGATTCCAAGCAATATGTGGGTAGAAGC...TCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp CCCCTCCACGAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCGTAAGGGAGTGTGTTTaGGTTTCTGTTTTATCTTCA +
Preference number: 5 (lower is better)
Translates to: PLHETTQLKLGAGKSFRCVRECV*VSVLSS
Trigger: TGAAGATAAAACAGAAACCAAAACACACTCCCTTAC...GCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTCGTGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS CCA 90 bp AGGAATTGGCTTAGCTGTTTCCCAGGCTTCTACCCACATATTGCTTaGAATCTTCATCCGGGCACTCAGTTCTCCTTTCAGCACCACATT +
Preference number: 5 (lower is better)
Translates to: RNWLSCFPGFYPHIA*NLHPGTQFSFQHHI
Trigger: AATGTGGTGCTGAAAGGAGAACTGAGTGCCCGGATGAAGATTCCAAGCAATATGTGGGTAGAAGCCTGGGAAACAGCTAAGCCAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS-3UTR CAA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCCCATTTGTGGTGAATTaGCACAAAGAGTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: YTKAISRAEISQQLKPILPFVVN*HKEWHL
Trigger: CAGGTGCCACTCTTTGTGCAAATTCACCACAAATGG...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGGGAACCGTCTTCTACTaGGTACAGCACTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: YFIKYSTQPATTKRERMLGTVFY*VQHWPQ
Trigger: CTGAGGCCAGTGCTGTACCAAGTAGAAGACGGTTCC...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATCATACCCAGCAAATCTaGCATAGATTGTGGAACAAC +
Preference number: 5 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDHTQQI*HRLWNN
Trigger: GTTGTTCCACAATCTATGCAAGATTTGCTGGGTATG...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGCCATACCCAGCAAATCTaGCATAGATTGTGGAACAAC +
Preference number: 5 (lower is better)
Translates to: CWLHCFHYNPAGSLLGSCHTQQI*HRLWNN
Trigger: GTTGTTCCACAATCTATGCAAGATTTGCTGGGTATG...GCAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp TATACAAAGGCCATCTCTAGGGCAGAAATCTCTCAACAGCTCAAGCCCATCCTCGAACTCAGAAGAAGGTaGCACTTAGATTCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: YTKAISRAEISQQLKPILELRRR*HLDSLR
Trigger: TCTCAGCGAATCTAAGTGCAACCTTCTTCTGAGTTC...GAGGATGGGCTTGAGCTGTTGAGAGATTTCTGCCCTAGAGATGGCCTTTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTCCATTTGTGGTGAATTaGCACAAAGAGTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: LAQGLLVALFPLQPSWILPFVVN*HKEWHL
Trigger: CAGGTGCCACTCTTTGTGCAAATTCACCACAAATGG...AAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp TTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGTCGTACACCAGGACCTaGACATTCTCCTACATACAT +
Preference number: 5 (lower is better)
Translates to: LLVALFPLQPSWILAGFLSYTRT*TFSYIH
Trigger: ATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACGA...CAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp TTGTTGGTTGCATTGTTTCCATTACAACCCAGCTGGATCCTTGCTGGGTTCCTGATCTATGTCTGGAGGTaGCTGAGGCCAAAAATACTG +
Preference number: 5 (lower is better)
Translates to: LLVALFPLQPSWILAGFLIYVWR*LRPKIL
Trigger: CAGTATTTTTGGCCTCAGCAACCTCCAGACATAGAT...CAGGAACCCAGCAAGGATCCAGCTGGGTTGTAATGGAAACAATGCAACCAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp GGGAGCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATTTCGGATTTTCTTCTTaGCAGTGTGTACCATATTTG +
Preference number: 5 (lower is better)
Translates to: GSKQRPSSHTDTRHLELHFGFSS*QCVPYL
Trigger: CAAATATGGTACACACTGCAAAGAAGAAAATCCGAA...ATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp AAGATTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCTTAGGTCCTCCTTTCTaGCCACTCTCTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: KITKQRPSSHTDTRHLELLGPPF*PLSCPF
Trigger: AAATGGACAAGAGAGTGGCAAGAAAGGAGGACCTAA...GAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTTTAGGTCCTCCTTTCTaGCCACTCTCTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: SDEIFSDEATSIPARSRILGPPF*PLSCPF
Trigger: AAATGGACAAGAGAGTGGCAAGAAAGGAGGACCTAA...AATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCCTACCCACATATTGCTaGGAATCTTCATCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: IKYSTQPATTKRERMLYSLPTYC*ESSSGH
Trigger: GTGCCCGGATGAAGATTCCAAGCAATATGTGGGTAG...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCAAACATGCTTCTACCCACATATaGCTTGGAATCTTCATCCGG +
Preference number: 5 (lower is better)
Translates to: TKNVLETTALLGSAGCKHASTHI*LGIFIR
Trigger: CCGGATGAAGATTCCAAGCAATATGTGGGTAGAAGC...ATGTTTGCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATAGTCTAAAGTCCTCTTaGGTGAGAACACTGTACATC +
Preference number: 5 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDSLKSS*VRTLYI
Trigger: GATGTACAGTGTTCTCACCAAAGAGGACTTTAGACT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ATTTGTAGGATAAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCCTTTCCGATGCTGGTTaGATTCCTGATCACCCAACT +
Preference number: 5 (lower is better)
Translates to: ICRINAGPPIHTAELTILLSDAG*IPDHPT
Trigger: AGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG...GAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTTATCCTACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp GAAACGACACAGCTCAAGCTTGGTGCTGGGAAGTCTTTCCGATGCTGGTTTGATACTATACTCAACATTTaGTGGCAACGTGGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: ETTQLKLGAGKSFRCWFDTILNI*WQRGVS
Trigger: ACTGACACCACGTTGCCACAAAATGTTGAGTATAGT...ATCAAACCAGCATCGGAAAGACTTCCCAGCACCAAGCTTGAGCTGTGTCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp TCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGGATTGTTGGTTGCATaGTTTCCATTACAACCCAGC +
Preference number: 5 (lower is better)
Translates to: SDEIFSDEATSIPARSRIGLLVA*FPLQPS
Trigger: GCTGGGTTGTAATGGAAACAATGCAACCAACAATCC...AATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp GGGAGCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATAAGAGCATATACAATTaGGATATTTGCAGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GSKQRPSSHTDTRHLELHKSIYN*DICRGL
Trigger: GAGACCTCTGCAAATATCCAAATTGTATATGCTCTT...ATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGCATCCAATCTTTGATTaGAAGATATCCAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: LPSRGHLATQTQDILSSMHPIFD*KISSRP
Trigger: AGGTCTGCTGGATATCTTCAAATCAAAGATTGGATG...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTCATCCAATCTTTGATTaGAAGATATCCAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: EIFSDEATSIPARSRIVGHPIFD*KISSRP
Trigger: AGGTCTGCTGGATATCTTCAAATCAAAGATTGGATG...ACCAACAATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp AAAGGCACAAAGAATGTTCTTGAGACCACTGCCTTGTTAGGCTCAGCAGGCTGCATACTGCTGCCAATCTaGAAGTACATAGGTAAATCG +
Preference number: 5 (lower is better)
Translates to: KGTKNVLETTALLGSAGCILLPI*KYIGKS
Trigger: CGATTTACCTATGTACTTCAAGATTGGCAGCAGTAT...GCAGCCTGCTGAGCCTAACAAGGCAGTGGTCTCAAGAACATTCTTTGTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTAGACCAATGTGGAGCTaGAATAGGATCCAAATCAGA +
Preference number: 5 (lower is better)
Translates to: KQRPSSHTDTRHLELHETRPMWS*NRIQIR
Trigger: TCTGATTTGGATCCTATTCAAGCTCCACATTGGTCT...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CAA 90 bp AAATGCAGGCCCTCCGATCCACACAGCAGAGTTGACTATACTCAACATTTTGTGCAAGAATCTCATCAGTaGACTCCTTTCGACGGCAAA +
Preference number: 5 (lower is better)
Translates to: KCRPSDPHSRVDYTQHFVQESHQ*TPFDGK
Trigger: TTTGCCGTCGAAAGGAGTCAACTGATGAGATTCTTG...CACAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGATCGGAGGGCCTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCAGACACAAGACATCTaGAGCTCCATGAAACTAGAA +
Preference number: 5 (lower is better)
Translates to: KQRPSSHTDTRHLELHETQTQDI*SSMKLE
Trigger: TTCTAGTTTCATGGAGCTCAAGATGTCTTGTGTCTG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CAA 90 bp TTACCAAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGATCCACACAGCAGAGTaGACTATACTCAACATTTTG +
Preference number: 5 (lower is better)
Translates to: LPSRGHLATQTQDILSSMIHTAE*TILNIL
Trigger: CAAAATGTTGAGTATAGTCAACTCTGCTGTGTGGAT...CATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264158.13
CDS-3UTR CAA 90 bp TCTCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGACTCAAGGATTGTTGGTaGCATTGTTTCCATTACAAC +
Preference number: 5 (lower is better)
Translates to: SQMKSSVMRPHLSRLAQGLKDCW*HCFHYN
Trigger: GTTGTAATGGAAACAATGCAACCAACAATCCTTGAG...TCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS GCA 90 bp TTCCCATCGGAAACGCATTTCAAGAACAAATTCCTGCCAGAGGTGTaGCACTCCTTTCAACCCTCCATGGTAAAAATTGATCATACAGAG +
Preference number: 5 (lower is better)
Translates to: FPSETHFKNKFLPEV*HSFQPSMVKIDHTE
Trigger: CTCTGTATGATCAATTTTTACCATGGAGGGTTGAAAGGAGTGGCACACCTCTGGCAGGAATTTGTTCTTGAAATGCGTTTCCGATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS-3UTR CAA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTATATCAGCAGTTTCTTaGCCTTCTTCCTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: KQRPSSHTDTRHLELHETISAVS*PSSSNA
Trigger: TGCATTTGAGGAAGAAGGCAAAGAAACTGCTGATAT...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000539493.2
CDS-3UTR CAA 90 bp TCAGATGAAATCTTCAGTGATGAGGCCACATCTATCCCGGCTCGCTCAAGGATTCCGGCTCTGTCAATTTaGACAAAGCATGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: SDEIFSDEATSIPARSRIPALSI*TKHELY
Trigger: ATATAACTCATGCTTTGTCAAAATTGACAGAGCCGG...AATCCTTGAGCGAGCCGGGATAGATGTGGCCTCATCACTGAAGATTTCATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCGATCTGGGGGTCCACTaGCTAATCCTGGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: ILYFIKYSTQPATTKRERDLGVH*LILESE
Trigger: TTCTGATTCCAGGATTAGCAAGTGGACCCCCAGATC...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGCTTTCCGATGCTGGTTaGATTCCTGATCACCCAACT +
Preference number: 5 (lower is better)
Translates to: YFIKYSTQPATTKRERMLLSDAG*IPDHPT
Trigger: AGTTGGGTGATCAGGAATCAAACCAGCATCGGAAAG...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS TCA 90 bp TGCACCACATTTTTAATCCATTCATCTGCCAATGGACACTCTGGTTaGTTCCACATCTTGGCTGTTGTGAACAGTGCTGCAATCAACATG +
Preference number: 5 (lower is better)
Translates to: CTTFLIHSSANGHSG*FHILAVVNSAAINM
Trigger: CATGTTGATTGCAGCACTGTTCACAACAGCCAAGATGTGGAATCAACCAGAGTGTCCATTGGCAGATGAATGGATTAAAAATGTGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487003.5
CDS-3UTR CAA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTCGTACACCAGGACCTaGACATTCTCCTACATACAT +
Preference number: 5 (lower is better)
Translates to: YFIKYSTQPATTKRERMLSYTRT*TFSYIH
Trigger: ATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACGA...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CCACATCTATCCCGGCTCGCTCAAGGATTGTTGGTTGCATTGTTTCCATTACAAATACTGCTGCCAATCTaGAAGTACATAGGTAAATCG +
Preference number: 5 (lower is better)
Translates to: PHLSRLAQGLLVALFPLQILLPI*KYIGKS
Trigger: CGATTTACCTATGTACTTCAAGATTGGCAGCAGTAT...TTGTAATGGAAACAATGCAACCAACAATCCTTGAGCGAGCCGGGATAGATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGATCTATGTCTGGAGGTaGCTGAGGCCAAAAATACTG +
Preference number: 5 (lower is better)
Translates to: YFIKYSTQPATTKRERMLIYVWR*LRPKIL
Trigger: CAGTATTTTTGGCCTCAGCAACCTCCAGACATAGAT...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGTACAGCCTGATAATTTATGAATaGGAACTGATGCCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: IKYSTQPATTKRERMLYSLIIYE*ELMPAL
Trigger: CAGAGCCGGCATCAGTTCCAATTCATAAATTATCAG...GCTGTACAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp AAGCAGAGGCCATCTAGCCACACAGACACAAGACATCTTGAGCTCCATGAAACTCTTTATTTTGCACACTaGCTGCTGATATATAGAACC +
Preference number: 5 (lower is better)
Translates to: KQRPSSHTDTRHLELHETLYFAH*LLIYRT
Trigger: GGTTCTATATATCAGCAGCAAGTGTGCAAAATAAAG...AGTTTCATGGAGCTCAAGATGTCTTGTGTCTGTGTGGCTAGATGGCCTCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp ATTCTCTACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATCTATGTCTGGAGGTaGCTGAGGCCAAAAATACTG +
Preference number: 5 (lower is better)
Translates to: ILYFIKYSTQPATTKRERIYVWR*LRPKIL
Trigger: CAGTATTTTTGGCCTCAGCAACCTCCAGACATAGAT...GCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTAGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGGCACCAAATGGTAACTaGCCAAACTCCAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LNALAHIPNYTICMTVSRAPNGN*PNSKPP
Trigger: TGGAGGCTTGGAGTTTGGCAAGTTACCATTTGGTGC...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TACTTCATTAAATACAGTACCCAGCCAGCAACCACAAAAAGAGAACGCATGCTGCAGACACAAGACATCTaGAGCTCCATGAAACTAGAA +
Preference number: 5 (lower is better)
Translates to: YFIKYSTQPATTKRERMLQTQDI*SSMKLE
Trigger: TTCTAGTTTCATGGAGCTCAAGATGTCTTGTGTCTG...CAGCATGCGTTCTCTTTTTGTGGTTGCTGGCTGGGTACTGTATTTAATGAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGCCTTTCAGCACCACATaGCCCTTTTCATCAATCACC +
Preference number: 5 (lower is better)
Translates to: LNALAHIPNYTICMTVSRPFSTT*PFSSIT
Trigger: GGTGATTGATGAAAAGGGCAATGTGGTGCTGAAAGG...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGAGAACCACGAAGTGTTaGCACAGACCACGAATGCAG +
Preference number: 5 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRRTTKC*HRPRMQ
Trigger: CTGCATTCGTGGTCTGTGCAAACACTTCGTGGTTCT...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS CCA 90 bp AATAGTCATTTAGAGACACCAGCAAATAGATCTGACCTTTTCGAGTaGCTTTCCCAAAGAGTTTCCAATCAGTTTCCAGTCATTCAAGAC +
Preference number: 5 (lower is better)
Translates to: NSHLETPANRSDLFE*LSQRVSNQFPVIQD
Trigger: GTCTTGAATGACTGGAAACTGATTGGAAACTCTTTGGGAAAGCCACTCGAAAAGGTCAGATCTATTTGCTGGTGTCTCTAAATGACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425393.1
CDS-3UTR CAA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGGCTTCTACCCACATATaGCTTGGAATCTTCATCCGG +
Preference number: 5 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRASTHI*LGIFIR
Trigger: CCGGATGAAGATTCCAAGCAATATGTGGGTAGAAGC...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS GCA 90 bp CAATGTGCTCTTGGAGGAAAGTCATTATTCATACCCAGCAAATCTTaGATAGATTGTGGAACAACATCCTCTAATAACTCATCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: QCALGGKSLFIPSKS*IDCGTTSSNNSSFP
Trigger: AGGAAAGGATGAGTTATTAGAGGATGTTGTTCCACAATCTATGCAAGATTTGCTGGGTATGAATAATGACTTTCCTCCAAGAGCACATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CCA 90 bp CAAACACTGAGGATTCTCAGCTTTTCGAACTCTAACAGACCAATGTaGAGCTTGAATAGGATCCAAATCAGAATAAACATCATTATCCAC +
Preference number: 5 (lower is better)
Translates to: QTLRILSFSNSNRPM*SLNRIQIRINIIIH
Trigger: GTGGATAATGATGTTTATTCTGATTTGGATCCTATTCAAGCTCCACATTGGTCTGTTAGAGTTCGAAAAGCTGAGAATCCTCAGTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000489858.1
ENST00000539493.2
CDS-3UTR CAA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTTAGGTCCTCCTTTCTaGCCACTCTCTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: STQCISTYTKLYYLHDSLLGPPF*PLSCPF
Trigger: AAATGGACAAGAGAGTGGCAAGAAAGGAGGACCTAA...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp GAGAAAATGATCTGCTCTAAGAGCATATACAATTTGGATATTTGCAGAGGTCTCCTCGCTCAAGGATTGTaGGTTGCATTGTTTCCATTA +
Preference number: 5 (lower is better)
Translates to: EKMICSKSIYNLDICRGLLAQGL*VALFPL
Trigger: TAATGGAAACAATGCAACCAACAATCCTTGAGCGAG...GAGACCTCTGCAAATATCCAAATTGTATATGCTCTTAGAGCAGATCATTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539493.2
CDS-3UTR CAA 90 bp AATATCCAAAATGCTCATCAACAGTTAATTAGTACAAGAAAGATGACCACCAGGCATACCCAGCAAATCTaGCATAGATTGTGGAACAAC +
Preference number: 5 (lower is better)
Translates to: NIQNAHQQLISTRKMTTRHTQQI*HRLWNN
Trigger: GTTGTTCCACAATCTATGCAAGATTTGCTGGGTATG...CCTGGTGGTCATCTTTCTTGTACTAATTAACTGTTGATGAGCATTTTGGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCAGTCTAAAGTCCTCTTaGGTGAGAACACTGTACATC +
Preference number: 5 (lower is better)
Translates to: STQCISTYTKLYYLHDSLSLKSS*VRTLYI
Trigger: GATGTACAGTGTTCTCACCAAAGAGGACTTTAGACT...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp TTAGTAAGCAAAATATGCTACCAAAGAAGATGGTCACTGCAATGTTTCTCTGACACAGTGAATCCAGGTTaGTTCTCAGAGTACATTCTT +
Preference number: 5 (lower is better)
Translates to: LVSKICYQRRWSLQCFSDTVNPG*FSEYIL
Trigger: AAGAATGTACTCTGAGAACAAACCTGGATTCACTGT...GTCAGAGAAACATTGCAGTGACCATCTTCTTTGGTAGCATATTTTGCTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425393.1
CDS-3UTR CAA 90 bp TCTACTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCCCGGCTCTGTCAATTTaGACAAAGCATGAGTTATAT +
Preference number: 5 (lower is better)
Translates to: STQCISTYTKLYYLHDSLPALSI*TKHELY
Trigger: ATATAACTCATGCTTTGTCAAAATTGACAGAGCCGG...GAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAGTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS-3UTR CAA 90 bp CTCAATGCATTAGCACATATACCAAATTATACTATCTGCATGACAGTCTCTAGGTTCGGATTTTCTTCTTaGCAGTGTGTACCATATTTG +
Preference number: 5 (lower is better)
Translates to: LNALAHIPNYTICMTVSRFGFSS*QCVPYL
Trigger: CAAATATGGTACACACTGCAAAGAAGAAAATCCGAA...CCTAGAGACTGTCATGCAGATAGTATAATTTGGTATATGTGCTAATGCATTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264158.13
ENST00000442034.5
CDS TCA 72 bp AGTAGGGAGCAGGGCGCGGCACAGTGGTGCGCAAAATaGATTCCCGGCCAGCAGGGGGTGGGAAGTCTGACA +
Preference number: 6 (lower is better)
Translates to: SREQGAAQWCAK*IPGQQGVGSLT
Trigger: TGTCAGACTTCCCACCCCCTGCTGGCCGGGAATTCATTTTGCGCACCACTGTGCCGCGCCCTGCTCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000497080.1
ENST00000539493.2
CDS GCA 72 bp CGGCCAGCAGGGGGTGGGAAGTCTGACACGGAGTTCTaGCTTCTTTCCTCTGGGGAGCCCATTCTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: RPAGGGKSDTEF*LLSSGEPILFN
Trigger: ATTGAAGAGAATGGGCTCCCCAGAGGAAAGAAGGCAGAACTCCGTGTCAGACTTCCCACCCCCTGCTGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000497080.1
ENST00000539493.2
CDS CCA 72 bp TTCCTCTGGGGAGCCCATTCTCTTCAATTCCTCCTCTaGTGGAGTCATAGCTGCAGCCCTCTGGGCATTCAC +
Preference number: 6 (lower is better)
Translates to: FLWGAHSLQFLL*WSHSCSPLGIH
Trigger: GTGAATGCCCAGAGGGCTGCAGCTATGACTCCACCAGAGGAGGAATTGAAGAGAATGGGCTCCCCAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000487003.5
ENST00000539493.2
CDS TCA 72 bp GAGAGCAGACAGGCACTCTGCATGCGTGCTCGAAGGTaGGCCCCCTCTGCCGATGTACCTAATTTAGCTAAA +
Preference number: 6 (lower is better)
Translates to: ESRQALCMRARR*APSADVPNLAK
Trigger: TTTAGCTAAATTAGGTACATCGGCAGAGGGGGCTCACCTTCGAGCACGCATGCAGAGTGCCTGTCTGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS TCA 72 bp ATAGCTGCAGCCCTCTGGGCATTCACAAACAGCTTGTaGATGATCCTGCCAGCATGTCCTCTTCCTGCACCG +
Preference number: 6 (lower is better)
Translates to: IAAALWAFTNSL*MILPACPLPAP
Trigger: CGGTGCAGGAAGAGGACATGCTGGCAGGATCATTCACAAGCTGTTTGTGAATGCCCAGAGGGCTGCAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264158.13
ENST00000487003.5
ENST00000539493.2
CDS CAA 72 bp GTAACAGGTGCCGAGCAAGGTCTGCAGGTTTCTGGATaGCCAGATAGTGCAGCACCTTTTCTGCTTCCCGTG +
Preference number: 6 (lower is better)
Translates to: VTGAEQGLQVSG*PDSAAPFLLPV
Trigger: CACGGGAAGCAGAAAAGGTGCTGCACTATCTGGCAATCCAGAAACCTGCAGACCTTGCTCGGCACCTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS TCA 72 bp GATTCAGTCAGCCTCTGGGCATTCACAAACAGCTTGTaGATGATCCTGCCAGCATGTCCTCTTCCTGCACCG +
Preference number: 6 (lower is better)
Translates to: DSVSLWAFTNSL*MILPACPLPAP
Trigger: CGGTGCAGGAAGAGGACATGCTGGCAGGATCATTCACAAGCTGTTTGTGAATGCCCAGAGGCTGACTGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS GCA 72 bp TGTCCTCTTCCTGCACCGGTGACTAACACTTCAGGCTaGTCCAGCAGGCAACTCACAAACCTTTCAAGATCT +
Preference number: 6 (lower is better)
Translates to: CPLPAPVTNTSG*SSRQLTNLSRS
Trigger: AGATCTTGAAAGGTTTGTGAGTTGCCTGCTGGAGCAGCCTGAAGTGTTAGTCACCGGTGCAGGAAGAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS GCA 72 bp CATTCTCTTCAATTCCTCCTCTGGTGGAGTCATAGCTaGAGCCTCATCAGAAGATTCAGTCAGCCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: HSLQFLLWWSHS*SLIRRFSQPLG
Trigger: GCCCAGAGGCTGACTGAATCTTCTGATGAGGCTGCAGCTATGACTCCACCAGAGGAGGAATTGAAGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS CCA 72 bp CTCTGGGGAGCCCATTCTCTTCAATTCCTCCTCTGGTaGAGTCATAGCTGCAGCCTCATCAGAAGATTCAGT +
Preference number: 6 (lower is better)
Translates to: LWGAHSLQFLLW*SHSCSLIRRFS
Trigger: ACTGAATCTTCTGATGAGGCTGCAGCTATGACTCCACCAGAGGAGGAATTGAAGAGAATGGGCTCCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS CCA 72 bp TTCCTCTGGGGAGCCCATTCTCTTCAATTCCTCCTCTaGTGGAGTCATAGCTGCAGCCTCATCAGAAGATTC +
Preference number: 6 (lower is better)
Translates to: FLWGAHSLQFLL*WSHSCSLIRRF
Trigger: GAATCTTCTGATGAGGCTGCAGCTATGACTCCACCAGAGGAGGAATTGAAGAGAATGGGCTCCCCAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442034.5
CDS CAA 90 bp CTAGCAGGAATTGGCTTAGCTGTTTCCCAGGCTTCTACCCACATATaGCTTGGAATCTTCATCCGGGCACTCAGTTCTCCTTTCAGCACC +
Preference number: 6 (lower is better)
Translates to: LAGIGLAVSQASTHI*LGIFIRALSSPFST
Trigger: GGTGCTGAAAGGAGAACTGAGTGCCCGGATGAAGATTCCAAGCAATATGTGGGTAGAAGCCTGGGAAACAGCTAAGCCAATTCCTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 90 bp GTGCAGCACCTTTTCTGCTTCCCGTGTATCATCAAAGAGTCTCCTTaGCCTTCTAGCAGGAATTGGCTTAGCTGTTTCCCAGGCTTCTAC +
Preference number: 6 (lower is better)
Translates to: VQHLFCFPCIIKESP*PSSRNWLSCFPGFY
Trigger: GTAGAAGCCTGGGAAACAGCTAAGCCAATTCCTGCTAGAAGGCAAAGGAGACTCTTTGATGATACACGGGAAGCAGAAAAGGTGCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS GCA 72 bp TTTTCCCATCGGAAACGCATTTCAAGAACAAATTCCTaGCAGAGGTGTGCCACTCCTTTCAACCCTCCATGG +
Preference number: 6 (lower is better)
Translates to: FSHRKRISRTNS*QRCATPFNPPW
Trigger: CCATGGAGGGTTGAAAGGAGTGGCACACCTCTGGCAGGAATTTGTTCTTGAAATGCGTTTCCGATGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CCA 72 bp CTTAGCTGTTTCCCAGGCTTCTACCCACATATTGCTTaGAATCTTCATCCGGGCACTCAGTTCTCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: LSCFPGFYPHIA*NLHPGTQFSFQ
Trigger: CTGAAAGGAGAACTGAGTGCCCGGATGAAGATTCCAAGCAATATGTGGGTAGAAGCCTGGGAAACAGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 72 bp ATTGGCTTAGCTGTTTCCCAGGCTTCTACCCACATATaGCTTGGAATCTTCATCCGGGCACTCAGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: IGLAVSQASTHI*LGIFIRALSSP
Trigger: AGGAGAACTGAGTGCCCGGATGAAGATTCCAAGCAATATGTGGGTAGAAGCCTGGGAAACAGCTAAGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS TCA 72 bp TTCATCAATCACCTCCTCTTCAATATAATCCCGGGGTaGATACCACCTCACAAAATCTTCCAGGGAGCAACC +
Preference number: 6 (lower is better)
Translates to: FINHLLFNIIPG*IPPHKIFQGAT
Trigger: GGTTGCTCCCTGGAAGATTTTGTGAGGTGGTATTCACCCCGGGATTATATTGAAGAGGAGGTGATTGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS TCA 72 bp ATGGACACTCTGGTTGATTCCACATCTTGGCTGTTGTaGACAGTGCTGCAATCAACATGGGAGTGCAGATAT +
Preference number: 6 (lower is better)
Translates to: MDTLVDSTSWLL*TVLQSTWECRY
Trigger: ATATCTGCACTCCCATGTTGATTGCAGCACTGTTCACAACAGCCAAGATGTGGAATCAACCAGAGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487003.5
CDS GCA 72 bp CTCTGGTTGATTCCACATCTTGGCTGTTGTGAACAGTaGTGCAATCAACATGGGAGTGCAGATATCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LWLIPHLGCCEQ*CNQHGSADISL
Trigger: CAAAGAGATATCTGCACTCCCATGTTGATTGCAGCACTGTTCACAACAGCCAAGATGTGGAATCAACCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487003.5
CDS CAA 90 bp CGTCCTTCCGGCCTTAAATTTGCCATCTCCTTAGGTCCTCCTTTCTaGCCACTCTCTTGTCCATTTCCTTTAAGTTCTTCAGTATCACTT +
Preference number: 6 (lower is better)
Translates to: RPSGLKFAISLGPPF*PLSCPFPLSSSVSL
Trigger: AAGTGATACTGAAGAACTTAAAGGAAATGGACAAGAGAGTGGCAAGAAAGGAGGACCTAAGGAGATGGCAAATTTAAGGCCGGAAGGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 72 bp CACGTAGCCCATACCATCTTACCAGGCAATGTGCTCTaGGAGGAAAGTCATTATTCATACCCAGCAAATCTT +
Preference number: 6 (lower is better)
Translates to: HVAHTILPGNVL*EESHYSYPANL
Trigger: AAGATTTGCTGGGTATGAATAATGACTTTCCTCCAAGAGCACATTGCCTGGTAAGATGGTATGGGCTACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS GCA 72 bp TGGTTGATTCCACATCTTGGCTGTTGTGAACAGTGCTaGAATCAACATGGGAGTGCAGATATCTCTTTGATA +
Preference number: 6 (lower is better)
Translates to: WLIPHLGCCEQC*NQHGSADISLI
Trigger: TATCAAAGAGATATCTGCACTCCCATGTTGATTGCAGCACTGTTCACAACAGCCAAGATGTGGAATCAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487003.5
CDS CCA 72 bp CACATTTTTAATCCATTCATCTGCCAATGGACACTCTaGTTGATTCCACATCTTGGCTGTTGTGAACAGTGC +
Preference number: 6 (lower is better)
Translates to: HIFNPFICQWTL*LIPHLGCCEQC
Trigger: GCACTGTTCACAACAGCCAAGATGTGGAATCAACCAGAGTGTCCATTGGCAGATGAATGGATTAAAAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487003.5
CDS CAA 90 bp ATGCACCACATTTTTAATCCATTCATCTGCCAATGGACACTCTGGTaGATTCCACATCTTGGCTGTTGTGAACAGTGCTGCAATCAACAT +
Preference number: 6 (lower is better)
Translates to: MHHIFNPFICQWTLW*IPHLGCCEQCCNQH
Trigger: ATGTTGATTGCAGCACTGTTCACAACAGCCAAGATGTGGAATCAACCAGAGTGTCCATTGGCAGATGAATGGATTAAAAATGTGGTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487003.5
CDS CAA 72 bp ATGAACCATTTCGAAATCAGTTCGTACACCAGGACCTaGACATTCTCCTACATACATTCTTCGCCATTTGTG +
Preference number: 6 (lower is better)
Translates to: MNHFEISSYTRT*TFSYIHSSPFV
Trigger: CACAAATGGCGAAGAATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACGAACTGATTTCGAAATGGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 90 bp ATCTATGTCTGGAGGTTGCTGAGGCCAAAAATACTGCTGCCAATCTaGAAGTACATAGGTAAATCGAATAGCAATACTAACTGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: IYVWRLLRPKILLPI*KYIGKSNSNTNWRQ
Trigger: TTGCCTCCAGTTAGTATTGCTATTCGATTTACCTATGTACTTCAAGATTGGCAGCAGTATTTTTGGCCTCAGCAACCTCCAGACATAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 72 bp TGGAGGTTGCTGAGGCCAAAAATACTGCTGCCAATCTaGAAGTACATAGGTAAATCGAATAGCAATACTAAC +
Preference number: 6 (lower is better)
Translates to: WRLLRPKILLPI*KYIGKSNSNTN
Trigger: GTTAGTATTGCTATTCGATTTACCTATGTACTTCAAGATTGGCAGCAGTATTTTTGGCCTCAGCAACCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 90 bp TTTTCTAAGATGAACCATTTCGAAATCAGTTCGTACACCAGGACCTaGACATTCTCCTACATACATTCTTCGCCATTTGTGGTGAATTTG +
Preference number: 6 (lower is better)
Translates to: FSKMNHFEISSYTRT*TFSYIHSSPFVVNL
Trigger: CAAATTCACCACAAATGGCGAAGAATGTATGTAGGAGAATGTCAAGGTCCTGGTGTACGAACTGATTTCGAAATGGTTCATCTTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS TCA 72 bp CCAGTTTGTATGTTAAACTGTCAGATGGTGCAGACTTaGACTGATTGTAGAGATTATAGTCTTCACTCTCTG +
Preference number: 6 (lower is better)
Translates to: PVCMLNCQMVQT*TDCRDYSLHSL
Trigger: CAGAGAGTGAAGACTATAATCTCTACAATCAGTTCAAGTCTGCACCATCTGACAGTTTAACATACAAACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS TCA 72 bp TTATATGTGCCACATTTTCTTAATCCAGTCTGTCATTaGTGGACATTTGGGTTGGTTTCAAGTCTTCGCTGT +
Preference number: 6 (lower is better)
Translates to: LYVPHFLNPVCH*WTFGLVSSLRC
Trigger: ACAGCGAAGACTTGAAACCAACCCAAATGTCCATCAATGACAGACTGGATTAAGAAAATGTGGCACATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487003.5
CDS CCA 72 bp AGGATTCTCAGCTTTTCGAACTCTAACAGACCAATGTaGAGCTTGAATAGGATCCAAATCAGAATAAACATC +
Preference number: 6 (lower is better)
Translates to: RILSFSNSNRPM*SLNRIQIRINI
Trigger: GATGTTTATTCTGATTTGGATCCTATTCAAGCTCCACATTGGTCTGTTAGAGTTCGAAAAGCTGAGAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000489858.1
ENST00000539493.2
CDS GCA 72 bp CTTGGAGGAAAGTCATTATTCATACCCAGCAAATCTTaGATAGATTGTGGAACAACATCCTCTAATAACTCA +
Preference number: 6 (lower is better)
Translates to: LGGKSLFIPSKS*IDCGTTSSNNS
Trigger: TGAGTTATTAGAGGATGTTGTTCCACAATCTATGCAAGATTTGCTGGGTATGAATAATGACTTTCCTCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 72 bp ATTTATGAATTGGAACTGATGCCGGCTCTGTCAATTTaGACAAAGCATGAGTTATATCAGCAGTTTCTTTGC +
Preference number: 6 (lower is better)
Translates to: IYELELMPALSI*TKHELYQQFLC
Trigger: GCAAAGAAACTGCTGATATAACTCATGCTTTGTCAAAATTGACAGAGCCGGCATCAGTTCCAATTCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000489858.1
ENST00000539493.2
CDS CAA 90 bp AAACTGATAATTTATGAATTGGAACTGATGCCGGCTCTGTCAATTTaGACAAAGCATGAGTTATATCAGCAGTTTCTTTGCCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: KLIIYELELMPALSI*TKHELYQQFLCLLP
Trigger: AGGAAGAAGGCAAAGAAACTGCTGATATAACTCATGCTTTGTCAAAATTGACAGAGCCGGCATCAGTTCCAATTCATAAATTATCAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000489858.1
ENST00000539493.2
CDS CAA 90 bp TTAGCGGTGACTCCTCTACACCTCTGTGTTTTCGGATTTTCTTCTTaGCAGTGTGTACCATATTTGAAACTGATAATTTATGAATTGGAA +
Preference number: 6 (lower is better)
Translates to: LAVTPLHLCVFGFSS*QCVPYLKLIIYELE
Trigger: TTCCAATTCATAAATTATCAGTTTCAAATATGGTACACACTGCAAAGAAGAAAATCCGAAAACACAGAGGTGTAGAGGAGTCACCGCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000489858.1
ENST00000539493.2
CDS CCA 72 bp TCTTCTGGATTGGGGAAGTGCAAAACTTTACTGGAATaGGATATTATCTGCTTTATGATCTTCTTAACTGAA +
Preference number: 6 (lower is better)
Translates to: SSGLGKCKTLLE*DIICFMIFLTE
Trigger: TTCAGTTAAGAAGATCATAAAGCAGATAATATCCCATTCCAGTAAAGTTTTGCACTTCCCCAATCCAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS GCA 72 bp GGGAAGTGCAAAACTTTACTGGAATGGGATATTATCTaGTTTATGATCTTCTTAACTGAAGAAATGTTTTCG +
Preference number: 6 (lower is better)
Translates to: GKCKTLLEWDII*FMIFLTEEMFS
Trigger: CGAAAACATTTCTTCAGTTAAGAAGATCATAAAGCAGATAATATCCCATTCCAGTAAAGTTTTGCACTTCCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000539493.2
CDS CAA 72 bp ACTCCTCTACACCTCTGTGTTTTCGGATTTTCTTCTTaGCAGTGTGTACCATATTTGAAACTGATAATTTAT +
Preference number: 6 (lower is better)
Translates to: TPLHLCVFGFSS*QCVPYLKLIIY
Trigger: ATAAATTATCAGTTTCAAATATGGTACACACTGCAAAGAAGAAAATCCGAAAACACAGAGGTGTAGAGGAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264158.13
ENST00000442034.5
ENST00000487003.5
ENST00000489858.1
ENST00000539493.2